disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 21 - 84 | 9.9e-13 | Rx N-terminal domain |
| NB-ARC | PF00931 | 166 - 334 | 9.7e-30 | NB-ARC domain |
| WHD_DRP | PF23559 | 419 - 488 | 9e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 569 - 909 | 8.3e-24 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 685 - 824 | 5.3e-33 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 638 |
| Acc16I | TGCGCA | 2 cut(s) | 365, 2081 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2432 |
| AccBSI | CCGCTC | 1 cut(s) | 3054 |
| AccI | GTMKAC | 1 cut(s) | 21 |
| AccIII | TCCGGA | 1 cut(s) | 3145 |
| AciI | CCGC | 7 cut(s) | 726, 864, 1223, 2416, 3052, 3165, 3403 |
| AcsI | RAATTY | 5 cut(s) | 323, 668, 2780, 2821, 2944 |
| AcuI | CTGAAG | 8 cut(s) | 234, 428, 1332, 1632, 2054, 2495, 2545, 2924 |
| AcyI | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| AfaI | GTAC | 4 cut(s) | 614, 870, 1856, 2512 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 551, 569, 649, 1336, 2432, 2843, 2990, 3152, 3223 |
| AflIII | ACRYGT | 3 cut(s) | 907, 1806, 2758 |
| AjiI | CACGTC | 2 cut(s) | 908, 1807 |
| AjnI | CCWGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1328, 1360 |
| Alw21I | GWGCWC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| Alw26I | GTCTC | 6 cut(s) | 1832, 2940, 3176, 3185, 3226, 3431 |
| Alw44I | GTGCAC | 1 cut(s) | 1846 |
| Ama87I | CYCGRG | 1 cut(s) | 3347 |
| Aor13HI | TCCGGA | 1 cut(s) | 3145 |
| AoxI | GGCC | 4 cut(s) | 541, 1072, 1102, 3452 |
| ApaLI | GTGCAC | 1 cut(s) | 1846 |
| ApeKI | GCWGC | 7 cut(s) | 55, 260, 267, 270, 2698, 3044, 3160 |
| ApoI | RAATTY | 5 cut(s) | 323, 668, 2780, 2821, 2944 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 219, 2738, 2979, 3369 |
| AspA2I | CCTAGG | 1 cut(s) | 545 |
| AspLEI | GCGC | 6 cut(s) | 366, 1594, 1938, 2082, 2731, 3304 |
| AspS9I | GGNCC | 5 cut(s) | 542, 1102, 2170, 2255, 3453 |
| AsuHPI | GGTGA | 8 cut(s) | 251, 913, 1426, 2108, 2210, 2240, 3232, 3463 |
| AsuNHI | GCTAGC | 1 cut(s) | 263 |
| AvaI | CYCGRG | 1 cut(s) | 3347 |
| AvaII | GGWCC | 2 cut(s) | 2170, 2255 |
| AvrII | CCTAGG | 1 cut(s) | 545 |
| BaeGI | GKGCMC | 1 cut(s) | 1850 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1013, 1046 |
| BanII | GRGCYC | 1 cut(s) | 3282 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1305, 1337 |
| BauI | CACGAG | 2 cut(s) | 1331, 2242 |
| BbsI | GAAGAC | 3 cut(s) | 297, 472, 1320 |
| Bbv12I | GWGCWC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| BbvI | GCAGC | 7 cut(s) | 42, 272, 279, 282, 2685, 3031, 3147 |
| BceAI | ACGGC | 1 cut(s) | 3324 |
| BciT130I | CCWGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| BclI | TGATCA | 1 cut(s) | 2248 |
| BcoDI | GTCTC | 6 cut(s) | 1832, 2940, 3176, 3185, 3226, 3431 |
| BfaI | CTAG | 5 cut(s) | 264, 546, 1767, 2546, 3416 |
| BfmI | CTRYAG | 1 cut(s) | 258 |
| BfoI | RGCGCY | 3 cut(s) | 1595, 2732, 3305 |
| BglII | AGATCT | 4 cut(s) | 373, 736, 1699, 2540 |
| BisI | GCNGC | 8 cut(s) | 56, 261, 268, 271, 2416, 2699, 3045, 3161 |
| BlnI | CCTAGG | 1 cut(s) | 545 |
| BlpI | GCTNAGC | 1 cut(s) | 1605 |
| BlsI | GCNGC | 8 cut(s) | 57, 262, 269, 272, 2417, 2700, 3046, 3162 |
| Bme1390I | CCNGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| Bme18I | GGWCC | 2 cut(s) | 2170, 2255 |
| BmeT110I | CYCGRG | 1 cut(s) | 3347 |
| BmgBI | CACGTC | 2 cut(s) | 908, 1807 |
| BmgT120I | GGNCC | 5 cut(s) | 542, 1102, 2170, 2255, 3453 |
| BmiI | GGNNCC | 1 cut(s) | 1103 |
| BmrFI | CCNGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| BmrI | ACTGGG | 1 cut(s) | 1925 |
| BmtI | GCTAGC | 1 cut(s) | 267 |
| BmuI | ACTGGG | 1 cut(s) | 1925 |
| BpiI | GAAGAC | 3 cut(s) | 297, 472, 1320 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2262, 2294 |
| BpmI | CTGGAG | 6 cut(s) | 405, 832, 1497, 1962, 2073, 3266 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3276 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1605 |
| BpuEI | CTTGAG | 4 cut(s) | 1214, 2336, 2435, 2970 |
| BsaBI | GATNNNNATC | 1 cut(s) | 741 |
| BsaHI | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| BsaJI | CCNNGG | 7 cut(s) | 114, 545, 960, 1979, 2702, 3217, 3283 |
| BsaWI | WCCGGW | 1 cut(s) | 3145 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 551, 569, 649, 1336, 2432, 2843, 2990, 3152, 3223 |
| Bse118I | RCCGGY | 3 cut(s) | 228, 923, 1189 |
| Bse1I | ACTGG | 7 cut(s) | 544, 612, 1008, 1709, 1920, 2056, 3168 |
| Bse3DI | GCAATG | 3 cut(s) | 1139, 2410, 2903 |
| Bse8I | GATNNNNATC | 1 cut(s) | 741 |
| BseAI | TCCGGA | 1 cut(s) | 3145 |
| BseBI | CCWGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| BseDI | CCNNGG | 7 cut(s) | 114, 545, 960, 1979, 2702, 3217, 3283 |
| BseJI | GATNNNNATC | 1 cut(s) | 741 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 551, 569, 649, 1336, 2432, 2843, 2990, 3152, 3223 |
| BseMI | GCAATG | 3 cut(s) | 1139, 2410, 2903 |
| BseMII | CTCAG | 8 cut(s) | 1673, 1747, 1827, 1957, 2112, 2667, 2806, 3267 |
| BseNI | ACTGG | 7 cut(s) | 544, 612, 1008, 1709, 1920, 2056, 3168 |
| BseRI | GAGGAG | 1 cut(s) | 131 |
| BseSI | GKGCMC | 1 cut(s) | 1850 |
| BseXI | GCAGC | 7 cut(s) | 42, 272, 279, 282, 2685, 3031, 3147 |
| Bsh1285I | CGRYCG | 1 cut(s) | 141 |
| BshFI | GGCC | 4 cut(s) | 543, 1074, 1104, 3454 |
| BsiEI | CGRYCG | 1 cut(s) | 141 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3347 |
| BsiSI | CCGG | 5 cut(s) | 229, 280, 924, 1190, 3146 |
| BslFI | GGGAC | 1 cut(s) | 2649 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 551, 569, 649, 1336, 2432, 2843, 2990, 3152, 3223 |
| BsmAI | GTCTC | 6 cut(s) | 1832, 2940, 3176, 3185, 3226, 3431 |
| BsmBI | CGTCTC | 3 cut(s) | 1832, 2940, 3185 |
| BsmFI | GGGAC | 1 cut(s) | 2649 |
| BsmI | GAATGC | 1 cut(s) | 1575 |
| BsnI | GGCC | 4 cut(s) | 543, 1074, 1104, 3454 |
| BsoBI | CYCGRG | 1 cut(s) | 3347 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| Bsp13I | TCCGGA | 1 cut(s) | 3145 |
| Bsp1407I | TGTACA | 2 cut(s) | 612, 1854 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1605 |
| BspACI | CCGC | 7 cut(s) | 726, 864, 1223, 2416, 3052, 3165, 3403 |
| BspANI | GGCC | 4 cut(s) | 543, 1074, 1104, 3454 |
| BspCNI | CTCAG | 8 cut(s) | 1674, 1746, 1828, 1956, 2111, 2668, 2805, 3268 |
| BspEI | TCCGGA | 1 cut(s) | 3145 |
| BspHI | TCATGA | 3 cut(s) | 60, 285, 2148 |
| BspLI | GGNNCC | 1 cut(s) | 1103 |
| BspMAI | CTGCAG | 1 cut(s) | 262 |
| BspOI | GCTAGC | 1 cut(s) | 267 |
| BspQI | GCTCTTC | 1 cut(s) | 225 |
| BsrBI | CCGCTC | 1 cut(s) | 3054 |
| BsrDI | GCAATG | 3 cut(s) | 1139, 2410, 2903 |
| BsrFI | RCCGGY | 3 cut(s) | 228, 923, 1189 |
| BsrGI | TGTACA | 2 cut(s) | 612, 1854 |
| BsrI | ACTGG | 7 cut(s) | 544, 612, 1008, 1709, 1920, 2056, 3168 |
| BssAI | RCCGGY | 3 cut(s) | 228, 923, 1189 |
| BssECI | CCNNGG | 7 cut(s) | 114, 545, 960, 1979, 2702, 3217, 3283 |
| BssNI | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| BssSI | CACGAG | 2 cut(s) | 1331, 2242 |
| BssT1I | CCWWGG | 3 cut(s) | 545, 2702, 3217 |
| Bst2BI | CACGAG | 2 cut(s) | 1331, 2242 |
| Bst2UI | CCWGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| Bst4CI | ACNGT | 8 cut(s) | 142, 1250, 1516, 1843, 2510, 2688, 2934, 3060 |
| Bst6I | CTCTTC | 7 cut(s) | 225, 1145, 2188, 2218, 2943, 3144, 3427 |
| BstACI | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 992, 2412 |
| BstAUI | TGTACA | 2 cut(s) | 612, 1854 |
| BstC8I | GCNNGC | 7 cut(s) | 230, 265, 993, 1191, 1666, 2427, 3165 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 549, 2988 |
| BstH2I | RGCGCY | 3 cut(s) | 1595, 2732, 3305 |
| BstHHI | GCGC | 6 cut(s) | 366, 1594, 1938, 2082, 2731, 3304 |
| BstMAI | GTCTC | 6 cut(s) | 1832, 2940, 3176, 3185, 3226, 3431 |
| BstMCI | CGRYCG | 1 cut(s) | 141 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 276, 992, 1231, 1250, 1776, 2412, 2704 |
| BstNI | CCWGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| BstNSI | RCATGY | 4 cut(s) | 370, 995, 2762, 2775 |
| BstSCI | CCNGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| BstSFI | CTRYAG | 1 cut(s) | 258 |
| BstSLI | GKGCMC | 1 cut(s) | 1850 |
| BstV1I | GCAGC | 7 cut(s) | 42, 272, 279, 282, 2685, 3031, 3147 |
| BstV2I | GAAGAC | 3 cut(s) | 297, 472, 1320 |
| BstX2I | RGATCY | 6 cut(s) | 373, 736, 742, 1699, 2362, 2540 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1134, 3366 |
| BstYI | RGATCY | 6 cut(s) | 373, 736, 742, 1699, 2362, 2540 |
| BsuRI | GGCC | 4 cut(s) | 543, 1074, 1104, 3454 |
| BtrI | CACGTC | 2 cut(s) | 908, 1807 |
| BtsI | GCAGTG | 2 cut(s) | 87, 3410 |
| BtsIMutI | CAGTG | 7 cut(s) | 87, 210, 1015, 3032, 3056, 3115, 3410 |
| Cac8I | GCNNGC | 7 cut(s) | 230, 265, 993, 1191, 1666, 2427, 3165 |
| CciI | TCATGA | 3 cut(s) | 60, 285, 2148 |
| CfoI | GCGC | 6 cut(s) | 366, 1594, 1938, 2082, 2731, 3304 |
| Cfr10I | RCCGGY | 3 cut(s) | 228, 923, 1189 |
| Cfr13I | GGNCC | 5 cut(s) | 542, 1102, 2170, 2255, 3453 |
| CseI | GACGC | 4 cut(s) | 234, 466, 628, 2988 |
| Csp6I | GTAC | 4 cut(s) | 613, 869, 1855, 2511 |
| CviQI | GTAC | 4 cut(s) | 613, 869, 1855, 2511 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 638 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 638 |
| Eam1104I | CTCTTC | 7 cut(s) | 225, 1145, 2188, 2218, 2943, 3144, 3427 |
| EarI | CTCTTC | 7 cut(s) | 225, 1145, 2188, 2218, 2943, 3144, 3427 |
| Ecl136II | GAGCTC | 1 cut(s) | 3280 |
| Eco130I | CCWWGG | 3 cut(s) | 545, 2702, 3217 |
| Eco147I | AGGCCT | 1 cut(s) | 1074 |
| Eco24I | GRGCYC | 1 cut(s) | 3282 |
| Eco32I | GATATC | 3 cut(s) | 351, 957, 2146 |
| Eco47I | GGWCC | 2 cut(s) | 2170, 2255 |
| Eco53kI | GAGCTC | 1 cut(s) | 3280 |
| Eco57I | CTGAAG | 8 cut(s) | 234, 428, 1332, 1632, 2054, 2495, 2545, 2924 |
| Eco88I | CYCGRG | 1 cut(s) | 3347 |
| EcoICRI | GAGCTC | 1 cut(s) | 3280 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 549, 2988 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1102 |
| EcoRII | CCWGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| EcoRV | GATATC | 3 cut(s) | 351, 957, 2146 |
| EcoT14I | CCWWGG | 3 cut(s) | 545, 2702, 3217 |
| EcoT22I | ATGCAT | 3 cut(s) | 1443, 2206, 2922 |
| EcoT38I | GRGCYC | 1 cut(s) | 3282 |
| ErhI | CCWWGG | 3 cut(s) | 545, 2702, 3217 |
| Esp3I | CGTCTC | 3 cut(s) | 1832, 2940, 3185 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 384, 416, 617, 649, 980, 1012, 1280, 1312 |
| FaqI | GGGAC | 1 cut(s) | 2649 |
| FauI | CCCGC | 2 cut(s) | 719, 3172 |
| FbaI | TGATCA | 1 cut(s) | 2248 |
| FblI | GTMKAC | 1 cut(s) | 21 |
| Fnu4HI | GCNGC | 8 cut(s) | 56, 261, 268, 271, 2416, 2699, 3045, 3161 |
| FriOI | GRGCYC | 1 cut(s) | 3282 |
| Fsp4HI | GCNGC | 8 cut(s) | 56, 261, 268, 271, 2416, 2699, 3045, 3161 |
| FspBI | CTAG | 5 cut(s) | 264, 546, 1767, 2546, 3416 |
| FspI | TGCGCA | 2 cut(s) | 365, 2081 |
| GlaI | GCGC | 6 cut(s) | 365, 1593, 1937, 2081, 2730, 3303 |
| GluI | GCNGC | 8 cut(s) | 56, 261, 268, 271, 2416, 2699, 3045, 3161 |
| GsuI | CTGGAG | 6 cut(s) | 405, 832, 1497, 1962, 2073, 3266 |
| HaeII | RGCGCY | 3 cut(s) | 1595, 2732, 3305 |
| HaeIII | GGCC | 4 cut(s) | 543, 1074, 1104, 3454 |
| HapII | CCGG | 5 cut(s) | 229, 280, 924, 1190, 3146 |
| HgaI | GACGC | 4 cut(s) | 234, 466, 628, 2988 |
| HhaI | GCGC | 6 cut(s) | 366, 1594, 1938, 2082, 2731, 3304 |
| Hin1I | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| Hin6I | GCGC | 6 cut(s) | 364, 1592, 1936, 2080, 2729, 3302 |
| HinP1I | GCGC | 6 cut(s) | 364, 1592, 1936, 2080, 2729, 3302 |
| HincII | GTYRAC | 2 cut(s) | 22, 631 |
| HindII | GTYRAC | 2 cut(s) | 22, 631 |
| HindIII | AAGCTT | 2 cut(s) | 2456, 3319 |
| HpaII | CCGG | 5 cut(s) | 229, 280, 924, 1190, 3146 |
| HphI | GGTGA | 8 cut(s) | 251, 913, 1426, 2108, 2210, 2240, 3232, 3463 |
| Hpy166II | GTNNAC | 9 cut(s) | 22, 594, 613, 631, 1411, 1848, 2029, 2750, 3410 |
| Hpy8I | GTNNAC | 9 cut(s) | 22, 594, 613, 631, 1411, 1848, 2029, 2750, 3410 |
| Hpy99I | CGWCG | 6 cut(s) | 20, 23, 161, 228, 909, 2646 |
| HpyCH4III | ACNGT | 8 cut(s) | 142, 1250, 1516, 1843, 2510, 2688, 2934, 3060 |
| HpyCH4IV | ACGT | 5 cut(s) | 523, 907, 1633, 1806, 2481 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 276, 992, 1231, 1250, 1776, 2412, 2704 |
| HpySE526I | ACGT | 5 cut(s) | 523, 907, 1633, 1806, 2481 |
| Hsp92I | GRCGYC | 4 cut(s) | 226, 477, 639, 2999 |
| HspAI | GCGC | 6 cut(s) | 364, 1592, 1936, 2080, 2729, 3302 |
| Kpn2I | TCCGGA | 1 cut(s) | 3145 |
| KroI | GCCGGC | 2 cut(s) | 228, 1189 |
| KroNI | GCCGGC | 2 cut(s) | 230, 1191 |
| Ksp22I | TGATCA | 1 cut(s) | 2248 |
| LguI | GCTCTTC | 1 cut(s) | 225 |
| LmnI | GCTCC | 1 cut(s) | 3285 |
| Lsp1109I | GCAGC | 7 cut(s) | 42, 272, 279, 282, 2685, 3031, 3147 |
| MaeI | CTAG | 5 cut(s) | 264, 546, 1767, 2546, 3416 |
| MaeII | ACGT | 5 cut(s) | 523, 907, 1633, 1806, 2481 |
| MbiI | CCGCTC | 1 cut(s) | 3054 |
| MfeI | CAATTG | 3 cut(s) | 1773, 2552, 2861 |
| MflI | RGATCY | 6 cut(s) | 373, 736, 742, 1699, 2362, 2540 |
| MhlI | GDGCHC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| MlyI | GAGTC | 2 cut(s) | 479, 3069 |
| MmeI | TCCRAC | 9 cut(s) | 560, 640, 812, 928, 930, 1336, 2314, 2553, 2670 |
| Mph1103I | ATGCAT | 3 cut(s) | 1443, 2206, 2922 |
| MroI | TCCGGA | 1 cut(s) | 3145 |
| MroNI | GCCGGC | 2 cut(s) | 228, 1189 |
| MroXI | GAANNNNTTC | 4 cut(s) | 219, 2738, 2979, 3369 |
| MseI | TTAA | 9 cut(s) | 1202, 1292, 1659, 1724, 1784, 2012, 2060, 2339, 3068 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2624, 2880 |
| MspA1I | CMGCKG | 1 cut(s) | 3403 |
| MspI | CCGG | 5 cut(s) | 229, 280, 924, 1190, 3146 |
| MspR9I | CCNGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| MunI | CAATTG | 3 cut(s) | 1773, 2552, 2861 |
| Mva1269I | GAATGC | 1 cut(s) | 1575 |
| MvaI | CCWGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 276, 992, 1231, 1250, 1776, 2412, 2704 |
| NaeI | GCCGGC | 2 cut(s) | 230, 1191 |
| NgoMIV | GCCGGC | 2 cut(s) | 228, 1189 |
| NheI | GCTAGC | 1 cut(s) | 263 |
| NlaIV | GGNNCC | 1 cut(s) | 1103 |
| NmeAIII | GCCGAG | 1 cut(s) | 139 |
| NmuCI | GTSAC | 2 cut(s) | 239, 1361 |
| NsbI | TGCGCA | 2 cut(s) | 365, 2081 |
| NsiI | ATGCAT | 3 cut(s) | 1443, 2206, 2922 |
| NspI | RCATGY | 4 cut(s) | 370, 995, 2762, 2775 |
| PaeI | GCATGC | 1 cut(s) | 995 |
| PagI | TCATGA | 3 cut(s) | 60, 285, 2148 |
| PceI | AGGCCT | 1 cut(s) | 1074 |
| PciI | ACATGT | 1 cut(s) | 2758 |
| PciSI | GCTCTTC | 1 cut(s) | 225 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 533, 904, 2930 |
| PctI | GAATGC | 1 cut(s) | 1575 |
| PdiI | GCCGGC | 2 cut(s) | 230, 1191 |
| PdmI | GAANNNNTTC | 4 cut(s) | 219, 2738, 2979, 3369 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2432 |
| PkrI | GCNGC | 8 cut(s) | 57, 262, 269, 272, 2417, 2700, 3046, 3162 |
| PleI | GAGTC | 2 cut(s) | 478, 3069 |
| PpsI | GAGTC | 2 cut(s) | 478, 3069 |
| PscI | ACATGT | 1 cut(s) | 2758 |
| Psp124BI | GAGCTC | 1 cut(s) | 3282 |
| Psp6I | CCWGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| PspGI | CCWGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| PspN4I | GGNNCC | 1 cut(s) | 1103 |
| PspPI | GGNCC | 5 cut(s) | 542, 1102, 2170, 2255, 3453 |
| PstI | CTGCAG | 1 cut(s) | 262 |
| PsuI | RGATCY | 6 cut(s) | 373, 736, 742, 1699, 2362, 2540 |
| RsaI | GTAC | 4 cut(s) | 614, 870, 1856, 2512 |
| RsaNI | GTAC | 4 cut(s) | 613, 869, 1855, 2511 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2624, 2880 |
| SacI | GAGCTC | 1 cut(s) | 3282 |
| SalI | GTCGAC | 1 cut(s) | 20 |
| SapI | GCTCTTC | 1 cut(s) | 225 |
| SaqAI | TTAA | 9 cut(s) | 1202, 1292, 1659, 1724, 1784, 2012, 2060, 2339, 3068 |
| SatI | GCNGC | 8 cut(s) | 56, 261, 268, 271, 2416, 2699, 3045, 3161 |
| Sau96I | GGNCC | 5 cut(s) | 542, 1102, 2170, 2255, 3453 |
| SchI | GAGTC | 2 cut(s) | 479, 3069 |
| ScrFI | CCNGG | 4 cut(s) | 1980, 2349, 3284, 3360 |
| SduI | GDGCHC | 4 cut(s) | 1734, 1850, 2280, 3282 |
| SfcI | CTRYAG | 1 cut(s) | 258 |
| SinI | GGWCC | 2 cut(s) | 2170, 2255 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2624, 2880 |
| SmlI | CTYRAG | 4 cut(s) | 1229, 2315, 2450, 2985 |
| SmoI | CTYRAG | 4 cut(s) | 1229, 2315, 2450, 2985 |
| SphI | GCATGC | 1 cut(s) | 995 |
| SseBI | AGGCCT | 1 cut(s) | 1074 |
| SsiI | CCGC | 7 cut(s) | 726, 864, 1223, 2416, 3052, 3165, 3403 |
| SspI | AATATT | 1 cut(s) | 1257 |
| SspMI | CTAG | 5 cut(s) | 264, 546, 1767, 2546, 3416 |
| SstI | GAGCTC | 1 cut(s) | 3282 |
| StuI | AGGCCT | 1 cut(s) | 1074 |
| StyD4I | CCNGG | 4 cut(s) | 1978, 2347, 3282, 3358 |
| StyI | CCWWGG | 3 cut(s) | 545, 2702, 3217 |
| TaaI | ACNGT | 8 cut(s) | 142, 1250, 1516, 1843, 2510, 2688, 2934, 3060 |
| TaiI | ACGT | 5 cut(s) | 526, 910, 1636, 1809, 2484 |
| TatI | WGTACW | 3 cut(s) | 612, 868, 1854 |
| TauI | GCSGC | 1 cut(s) | 2418 |
| Tru1I | TTAA | 9 cut(s) | 1202, 1292, 1659, 1724, 1784, 2012, 2060, 2339, 3068 |
| Tru9I | TTAA | 9 cut(s) | 1202, 1292, 1659, 1724, 1784, 2012, 2060, 2339, 3068 |
| TscAI | CASTG | 7 cut(s) | 94, 217, 1015, 3032, 3063, 3115, 3417 |
| TseFI | GTSAC | 2 cut(s) | 239, 1361 |
| TseI | GCWGC | 7 cut(s) | 55, 260, 267, 270, 2698, 3044, 3160 |
| Tsp45I | GTSAC | 2 cut(s) | 239, 1361 |
| TspDTI | ATGAA | 5 cut(s) | 16, 336, 402, 1543, 2165 |
| TspGWI | ACGGA | 4 cut(s) | 303, 728, 1016, 1017 |
| TspRI | CASTG | 7 cut(s) | 94, 217, 1015, 3032, 3063, 3115, 3417 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2432 |
| VneI | GTGCAC | 1 cut(s) | 1846 |
| VpaK11BI | GGWCC | 2 cut(s) | 2170, 2255 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 549, 2988 |
| XapI | RAATTY | 5 cut(s) | 323, 668, 2780, 2821, 2944 |
| XbaI | TCTAGA | 1 cut(s) | 2545 |
| XceI | RCATGY | 4 cut(s) | 370, 995, 2762, 2775 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 571, 2126 |
| XmaJI | CCTAGG | 1 cut(s) | 545 |
| XmiI | GTMKAC | 1 cut(s) | 21 |
| XmnI | GAANNNNTTC | 4 cut(s) | 219, 2738, 2979, 3369 |
| XspI | CTAG | 5 cut(s) | 264, 546, 1767, 2546, 3416 |
| Zsp2I | ATGCAT | 3 cut(s) | 1443, 2206, 2922 |