Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RNA_pol_L_2 | PF13656 | 22 - 70 | 3.9e-16 | RNA polymerase Rpb3/Rpb11 dimerisation domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 137, 186 |
| AcsI | RAATTY | 1 cut(s) | 74 |
| AfaI | GTAC | 1 cut(s) | 86 |
| AgsI | TTSAA | 3 cut(s) | 163, 238, 272 |
| AjnI | CCWGG | 1 cut(s) | 174 |
| AlwI | GGATC | 2 cut(s) | 137, 186 |
| ApoI | RAATTY | 1 cut(s) | 74 |
| AspA2I | CCTAGG | 1 cut(s) | 49 |
| AsuHPI | GGTGA | 2 cut(s) | 152, 199 |
| AvrII | CCTAGG | 1 cut(s) | 49 |
| BccI | CCATC | 1 cut(s) | 109 |
| BciT130I | CCWGG | 1 cut(s) | 176 |
| BfaI | CTAG | 3 cut(s) | 27, 33, 50 |
| BfmI | CTRYAG | 1 cut(s) | 135 |
| BlnI | CCTAGG | 1 cut(s) | 49 |
| Bme1390I | CCNGG | 1 cut(s) | 176 |
| BmrFI | CCNGG | 1 cut(s) | 176 |
| BmsI | GCATC | 1 cut(s) | 157 |
| BsaJI | CCNNGG | 2 cut(s) | 49, 65 |
| BseBI | CCWGG | 1 cut(s) | 176 |
| BseDI | CCNNGG | 2 cut(s) | 49, 65 |
| BseGI | GGATG | 2 cut(s) | 13, 97 |
| BseRI | GAGGAG | 1 cut(s) | 9 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BsmI | GAATGC | 1 cut(s) | 90 |
| Bsp143I | GATC | 2 cut(s) | 142, 178 |
| BspPI | GGATC | 2 cut(s) | 137, 186 |
| BssECI | CCNNGG | 2 cut(s) | 49, 65 |
| BssMI | GATC | 2 cut(s) | 142, 178 |
| BssT1I | CCWWGG | 2 cut(s) | 49, 65 |
| Bst2UI | CCWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 251 |
| BstC8I | GCNNGC | 2 cut(s) | 172, 197 |
| BstF5I | GGATG | 2 cut(s) | 13, 97 |
| BstKTI | GATC | 2 cut(s) | 145, 181 |
| BstMBI | GATC | 2 cut(s) | 142, 178 |
| BstNI | CCWGG | 1 cut(s) | 176 |
| BstNSI | RCATGY | 2 cut(s) | 174, 203 |
| BstSCI | CCNGG | 1 cut(s) | 174 |
| BstSFI | CTRYAG | 1 cut(s) | 135 |
| BstX2I | RGATCY | 1 cut(s) | 178 |
| BstYI | RGATCY | 1 cut(s) | 178 |
| BtsCI | GGATG | 2 cut(s) | 13, 97 |
| Cac8I | GCNNGC | 2 cut(s) | 172, 197 |
| Csp6I | GTAC | 1 cut(s) | 85 |
| CviAII | CATG | 4 cut(s) | 171, 184, 200, 262 |
| CviJI | RGCY | 2 cut(s) | 26, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 26, 224 |
| CviQI | GTAC | 1 cut(s) | 85 |
| DpnI | GATC | 2 cut(s) | 144, 180 |
| DpnII | GATC | 2 cut(s) | 142, 178 |
| Eco130I | CCWWGG | 2 cut(s) | 49, 65 |
| EcoRII | CCWGG | 1 cut(s) | 174 |
| EcoT14I | CCWWGG | 2 cut(s) | 49, 65 |
| EcoT22I | ATGCAT | 1 cut(s) | 172 |
| ErhI | CCWWGG | 2 cut(s) | 49, 65 |
| FaeI | CATG | 4 cut(s) | 174, 187, 203, 265 |
| FaiI | YATR | 5 cut(s) | 61, 172, 185, 201, 263 |
| FatI | CATG | 4 cut(s) | 170, 183, 199, 261 |
| FokI | GGATG | 2 cut(s) | 20, 84 |
| FspBI | CTAG | 3 cut(s) | 27, 33, 50 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 4 cut(s) | 174, 187, 203, 265 |
| HinfI | GANTC | 2 cut(s) | 126, 272 |
| HpaII | CCGG | 1 cut(s) | 23 |
| HphI | GGTGA | 2 cut(s) | 152, 199 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 277 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 1 cut(s) | 251 |
| HpyCH4V | TGCA | 1 cut(s) | 170 |
| Hsp92II | CATG | 4 cut(s) | 174, 187, 203, 265 |
| Kzo9I | GATC | 2 cut(s) | 142, 178 |
| LpnPI | CCDG | 8 cut(s) | 36, 52, 123, 143, 159, 161, 188, 209 |
| LweI | GCATC | 1 cut(s) | 157 |
| MaeI | CTAG | 3 cut(s) | 27, 33, 50 |
| MalI | GATC | 2 cut(s) | 144, 180 |
| MboI | GATC | 2 cut(s) | 142, 178 |
| MflI | RGATCY | 1 cut(s) | 178 |
| MluCI | AATT | 2 cut(s) | 74, 239 |
| MnlI | CCTC | 3 cut(s) | 30, 105, 250 |
| Mph1103I | ATGCAT | 1 cut(s) | 172 |
| MseI | TTAA | 3 cut(s) | 117, 216, 283 |
| MslI | CAYNNNNRTG | 1 cut(s) | 188 |
| MspI | CCGG | 1 cut(s) | 23 |
| MspR9I | CCNGG | 1 cut(s) | 176 |
| Mva1269I | GAATGC | 1 cut(s) | 90 |
| MvaI | CCWGG | 1 cut(s) | 176 |
| NdeII | GATC | 2 cut(s) | 142, 178 |
| NlaIII | CATG | 4 cut(s) | 174, 187, 203, 265 |
| NsiI | ATGCAT | 1 cut(s) | 172 |
| NspI | RCATGY | 2 cut(s) | 174, 203 |
| PaeI | GCATGC | 1 cut(s) | 174 |
| PctI | GAATGC | 1 cut(s) | 90 |
| PfeI | GAWTC | 2 cut(s) | 126, 272 |
| Psp6I | CCWGG | 1 cut(s) | 174 |
| PspGI | CCWGG | 1 cut(s) | 174 |
| PsuI | RGATCY | 1 cut(s) | 178 |
| RsaI | GTAC | 1 cut(s) | 86 |
| RsaNI | GTAC | 1 cut(s) | 85 |
| RseI | CAYNNNNRTG | 1 cut(s) | 188 |
| SaqAI | TTAA | 3 cut(s) | 117, 216, 283 |
| Sau3AI | GATC | 2 cut(s) | 142, 178 |
| ScrFI | CCNGG | 1 cut(s) | 176 |
| SetI | ASST | 2 cut(s) | 55, 142 |
| SfaNI | GCATC | 1 cut(s) | 157 |
| SfcI | CTRYAG | 1 cut(s) | 135 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 188 |
| SphI | GCATGC | 1 cut(s) | 174 |
| Sse9I | AATT | 2 cut(s) | 74, 239 |
| SspI | AATATT | 1 cut(s) | 121 |
| SspMI | CTAG | 3 cut(s) | 27, 33, 50 |
| StyD4I | CCNGG | 1 cut(s) | 174 |
| StyI | CCWWGG | 2 cut(s) | 49, 65 |
| TaaI | ACNGT | 1 cut(s) | 251 |
| TasI | AATT | 2 cut(s) | 74, 239 |
| TfiI | GAWTC | 2 cut(s) | 126, 272 |
| Tru1I | TTAA | 3 cut(s) | 117, 216, 283 |
| Tru9I | TTAA | 3 cut(s) | 117, 216, 283 |
| TspGWI | ACGGA | 1 cut(s) | 20 |
| XapI | RAATTY | 1 cut(s) | 74 |
| XceI | RCATGY | 2 cut(s) | 174, 203 |
| XmaJI | CCTAGG | 1 cut(s) | 49 |
| XspI | CTAG | 3 cut(s) | 27, 33, 50 |
| Zsp2I | ATGCAT | 1 cut(s) | 172 |