Rmu_ssc0000255.1_g000053

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000255.1
Physical Location & Seq
Reverse (-)
299698 .. 303443
3746 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000255.1_g000053.1.cds

Sequence Viewer

Length: 3621 bp
atggctctgttccgatgtcacaatgcctccctttccagatatactacttctccttctggatttgcttatgacgtgttcctgagcttcagaggtgaagatacccgaaggaacttcactgatcacctccacacggcccttgtcaacgcccgatttcgaactttcctggatgaccctgaactcaaaaaaggggagaatatcaaggaagagcttgataaagccattcgagagtcacgaagttctgtgattgtgttttcgaaagactacgcctcttccaaatggtgcctggacgagcttgtcatgatccttgaacgcaagaggacctccaaccatttcgttttaccagtcttctacaacgttgatccatcccatctgaggaagcagactgaaagtgttgcagaagcatttactgaacaccagaaaactcaatcctctgagaagttgaatggatggcgggcagcacttaaacaagttgcagatctagcaggaatgaatttacaaaatgaagctgacgggcacgagtcaaagttcatccaaaagattgttacagtgattcaagacaagctaggtggtgtgcccctgaccgatgtccaagaggtgttacagaagaagttgtcgtttattaagcctcacctcgatgacgcggaggggaagcaactgaacaacccaactgtgaaggcatggctcaatgagcttaaggaagctgtttatgataccgaggacctattgcaggagattaagacagaagcattaagacgaaagatggaaccagaacctagaattagcacgagtaaggtacaagacctcaactccagttttccatctcatgcttttgactcaacattaatctacctcagggtagaggaggttcttaatagactagattccattatggagaagagaaaagaagtcttgagtttggaagcaagtgctggatacagggtatcacaaaccataccgtcaacttctttggtagaaaagtctgtatatggaagagatgaagagaaaaaaacattggttaaattattgctatcagatgatgagactggcaatgaaataggtgtgattcctattgtgggtatgggtgggattggaaagaccacccttgctcagttagtatacaacgatgttagagtgaagcaacattttcacctccaagcctgggtttgcgtttcaaaagaatttgatgtccttaggatctcgcaacacatttatgagtccctcacctcagaagcttgccaaagcacaaacctagatctgctgctatcaaagttgcaggcaactttgaggggaaaaaggttcttctttgtttttgatgacatctggaacaagaattataaccagttgcaattcttaataagtccccttgagtctggagcacatggaagcaagattattgtcacaacacgcgatgaagatgttacacgtatgatgggtagccatgaagctcaccgtctcatgccaatgtctaagcaagatagctggtcgttatttgaaaaacatgccttcaaaaatgcaggtattagtgcacgctcacgtcttgaaaaaatcggtagacaaattgttcgaaagtgcaagggtcttcctttggctattaagtcccttgcaggtctcttatgttctaaattaaatgtgggtgaatgggaaactatattgaacagtgacctgtgggagttgcctttggagagtgacattctgccatctctttggttgagctatatgtacctgccttcacaactcaaacattgttttgcatattgttcgatatttcccaagaactatgagttcagcacatcagaattggtttacttgtggaaggctgaagatctattgcaacctaaaaaaaacaaaactgcagaagaaatcggacaagattacttcaatgatctaatctcaatgtcattttttcaagtttcatcatgttccgatcaatatatcatgcatgaccttatcaatgatttagcaagctttgtatccggaggattttgtttgaggtggcagggcagtgattcacccaacaatttgagcaagactcgtcacttttcacatatgttgagatatgcgactgatagcctagagatgtttgaagctttacagcaagctaaatgtttgcacacctttctacccttagaaccatcttatatgtggtccactacttcgggcaaaggactctacgaggcattgccaaagtttcaatgtctaagaatgctcaagttatcagggtacgcaattaaggaattgcctgattcaattaacaacttgaaacatcttaagcacttggacttgtctcacagttccatcgaaaagttacctgatacaatttgtactttgtataacttgcaagtgttgttgttgtcatggtgtcattaccttactgaactgccagccaacttgggaaggttgattagcttgagcgatctggatattacagatacaccgataaaaaagatgccaccacaaatgggtaagttgaaagacctccagatgctgccagagtttgtgctagacaaacacactgctggggataatttgctggagttaaagaagcttgaaaaattgcgtggaagactttgtatctcagggcttttgcatagcagcggtttggaggcctacatactgagggacaagaagtttcttaaggaactggttttgcattggggacggtgggttctaactggttttgaagaagatattaatactgtagaagaaagagaagtgcttgagaagctccaacctcacctgaacctggaaaggcttacaattgaaggttatggaggcaaaatgtttccaggttggtcagaatattatttttcctctgctcttgtttctcttacactcgttttttgtaagaattgtatctccttgccaccgttgggacagctaccttccctcaaagagcttaaattcaggtatatgagtgggtggcaagaatggtctgatgttggaggtgacaataatgaaggcggcctttttcctaatcttgagaaacttgatgtgagtcactgtcccaatcttactgggagattagcgtcagacagtctcccatctcttgtgtctttgacggtatggaattgcccagaattcgaatgttttccggaagatggattcccgtcaaagttaaaatcacttgagtacttctactctaaaaaagggaatgcaaagagtatgcagaatctgaacaagggtctccgaacactcacctctcttgaagatttggaacttgattttaagtgcgacgaaaaagtagattggtttgcggaggagcaggaggggctgtttcccagcactctcacacatctcaagatctgccgtctgaattgtgagaccatcgacggcgccaagtggtttggccatctcaactctcttcaacaattggcgattcgggatttccctgcgctccgatgcttgccagataatggccatctcaactctcttcgaaaattgattataaaaaattgtcctgcgctccggtgcttgccagatagtggactaccctcttctctttctcatctacatatctcaaagtgtcctttgcttgagaaacggtgccaaagagagacgggtgaagattggcccaagattgctcacatcaagcgcatagagatcggttacagttggatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1206

Amino Acids

137.73

Weight (kDa)

6.45

Isoelectric Point (pI)

47.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1335, 3446
AasI GACNNNNNNGTC 1 cut(s) 293
Acc36I ACCTGC 3 cut(s) 1505, 1595, 1731
AccB1I GGYRCC 3 cut(s) 279, 3332, 3543
AccB7I CCANNNNNTGG 2 cut(s) 3413, 3482
AccI GTMKAC 2 cut(s) 1116, 1552
AccII CGCG 2 cut(s) 641, 1407
AccIII TCCGGA 2 cut(s) 1973, 3091
AciI CCGC 5 cut(s) 451, 641, 2595, 2961, 3254
AclI AACGTT 1 cut(s) 354
AclWI GGATC 3 cut(s) 295, 353, 1202
AcoI YGGCCR 2 cut(s) 3346, 3415
AcsI RAATTY 4 cut(s) 490, 1178, 2900, 3077
AcuI CTGAAG 2 cut(s) 70, 1839
AcyI GRCGYC 1 cut(s) 3333
AfaI GTAC 5 cut(s) 795, 1721, 2222, 2323, 3131
AflII CTTAAG 3 cut(s) 692, 2267, 2633
AflIII ACRYGT 2 cut(s) 72, 1421
AjiI CACGTC 2 cut(s) 73, 1535
AjnI CCWGG 5 cut(s) 162, 282, 1157, 2742, 2785
AjuI GAANNNNNNNTTGG 2 cut(s) 995, 1027
AloI GAACNNNNNNTCC 2 cut(s) 2649, 2681
Alw21I GWGCWC 2 cut(s) 1378, 1528
Alw26I GTCTC 8 cut(s) 1034, 1457, 1613, 2289, 3041, 3188, 3314, 3548
Alw44I GTGCAC 1 cut(s) 1524
AlwI GGATC 3 cut(s) 295, 353, 1202
AlwNI CAGNNNCTG 2 cut(s) 2485, 3172
Aor13HI TCCGGA 2 cut(s) 1973, 3091
AoxI GGCC 6 cut(s) 132, 2604, 2962, 3346, 3415, 3569
ApaLI GTGCAC 1 cut(s) 1524
ApeKI GCWGC 4 cut(s) 455, 1258, 2485, 2592
ApoI RAATTY 4 cut(s) 490, 1178, 2900, 3077
ArsI GACNNNNNNTTYG 2 cut(s) 1545, 1577
AseI ATTAAT 2 cut(s) 842, 2691
Asp700I GAANNNNTTC 1 cut(s) 3087
AspLEI GCGC 4 cut(s) 3335, 3394, 3463, 3594
AspS9I GGNCC 5 cut(s) 133, 318, 718, 2145, 3570
AsuII TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
AvaII GGWCC 3 cut(s) 318, 718, 2145
AxyI CCTNAGG 2 cut(s) 851, 1190
BaeGI GKGCMC 3 cut(s) 516, 576, 1528
BalI TGGCCA 2 cut(s) 3348, 3417
BanI GGYRCC 3 cut(s) 279, 3332, 3543
BauI CACGAG 2 cut(s) 515, 784
BbsI GAAGAC 3 cut(s) 337, 1571, 2569
Bbv12I GWGCWC 2 cut(s) 1378, 1528
BbvI GCAGC 4 cut(s) 467, 1245, 2472, 2604
BceAI ACGGC 3 cut(s) 147, 3291, 3346
BcgI CGANNNNNNTGC 4 cut(s) 1740, 1774, 3583, 3617
BciT130I CCWGG 5 cut(s) 164, 284, 1159, 2744, 2787
BciVI GTATCC 2 cut(s) 926, 1981
BclI TGATCA 1 cut(s) 118
BcoDI GTCTC 8 cut(s) 1034, 1457, 1613, 2289, 3041, 3188, 3314, 3548
BfaI CTAG 7 cut(s) 479, 563, 774, 878, 1250, 2072, 2501
BfmI CTRYAG 2 cut(s) 1851, 2697
BfoI RGCGCY 1 cut(s) 3336
BfrI CTTAAG 3 cut(s) 692, 2267, 2633
BfuAI ACCTGC 3 cut(s) 1505, 1595, 1731
BfuI GTATCC 2 cut(s) 926, 1981
BglII AGATCT 4 cut(s) 475, 1252, 1822, 3300
BisI GCNGC 5 cut(s) 456, 1259, 2486, 2593, 2962
BlsI GCNGC 5 cut(s) 457, 1260, 2487, 2594, 2963
BmcAI AGTACT 1 cut(s) 3131
Bme1390I CCNGG 5 cut(s) 164, 284, 1159, 2744, 2787
Bme18I GGWCC 3 cut(s) 318, 718, 2145
BmgBI CACGTC 2 cut(s) 73, 1535
BmgT120I GGNCC 5 cut(s) 133, 318, 718, 2145, 3570
BmiI GGNNCC 4 cut(s) 281, 765, 3334, 3545
BmrFI CCNGG 5 cut(s) 164, 284, 1159, 2744, 2787
BmrI ACTGGG 1 cut(s) 3024
BmsI GCATC 3 cut(s) 2436, 2472, 3389
BmuI ACTGGG 1 cut(s) 3024
BoxI GACNNNNGTC 1 cut(s) 584
BpiI GAAGAC 3 cut(s) 337, 1571, 2569
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
BpmI CTGGAG 4 cut(s) 793, 1392, 2462, 2552
Bpu10I CCTNAGC 1 cut(s) 80
Bpu14I TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
BpuEI CTTGAG 9 cut(s) 931, 1385, 2192, 2428, 2738, 2999, 3146, 3281, 3554
BsaAI YACGTR 1 cut(s) 1424
BsaHI GRCGYC 1 cut(s) 3333
BsaI GGTCTC 3 cut(s) 1613, 3188, 3314
BsaJI CCNNGG 2 cut(s) 714, 1158
BsaWI WCCGGW 3 cut(s) 1973, 3091, 3465
BsaXI ACNNNNNCTCC 8 cut(s) 11, 34, 41, 64, 791, 821, 3257, 3287
Bse1I ACTGG 7 cut(s) 341, 810, 1048, 1339, 2646, 2677, 3019
Bse21I CCTNAGG 2 cut(s) 851, 1190
Bse3DI GCAATG 2 cut(s) 1054, 2177
BseAI TCCGGA 2 cut(s) 1973, 3091
BseBI CCWGG 5 cut(s) 164, 284, 1159, 2744, 2787
BseDI CCNNGG 2 cut(s) 714, 1158
BseGI GGATG 4 cut(s) 172, 362, 452, 528
BseMI GCAATG 2 cut(s) 1054, 2177
BseMII CTCAG 8 cut(s) 71, 362, 423, 865, 1121, 1239, 2589, 2606
BseNI ACTGG 7 cut(s) 341, 810, 1048, 1339, 2646, 2677, 3019
BseRI GAGGAG 2 cut(s) 875, 3272
BseSI GKGCMC 3 cut(s) 516, 576, 1528
BseXI GCAGC 4 cut(s) 467, 1245, 2472, 2604
BseYI CCCAGC 2 cut(s) 2516, 3278
Bsh1236I CGCG 2 cut(s) 641, 1407
BshFI GGCC 6 cut(s) 134, 2606, 2964, 3348, 3417, 3571
BshNI GGYRCC 3 cut(s) 279, 3332, 3543
BsiHKAI GWGCWC 2 cut(s) 1378, 1528
BsiSI CCGG 3 cut(s) 1974, 3092, 3466
BslFI GGGAC 7 cut(s) 1201, 1344, 1582, 2633, 2670, 2886, 2988
BsmAI GTCTC 8 cut(s) 1034, 1457, 1613, 2289, 3041, 3188, 3314, 3548
BsmBI CGTCTC 2 cut(s) 1457, 3548
BsmFI GGGAC 7 cut(s) 1201, 1344, 1582, 2633, 2670, 2886, 2988
BsmI GAATGC 2 cut(s) 2208, 3157
BsnI GGCC 6 cut(s) 134, 2606, 2964, 3348, 3417, 3571
Bso31I GGTCTC 3 cut(s) 1613, 3188, 3314
Bsp119I TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
Bsp1286I GDGCHC 4 cut(s) 516, 576, 1378, 1528
Bsp13I TCCGGA 2 cut(s) 1973, 3091
BspACI CCGC 5 cut(s) 451, 641, 2595, 2961, 3254
BspANI GGCC 6 cut(s) 134, 2606, 2964, 3348, 3417, 3571
BspCNI CTCAG 8 cut(s) 72, 363, 424, 864, 1120, 1238, 2588, 2607
BspEI TCCGGA 2 cut(s) 1973, 3091
BspFNI CGCG 2 cut(s) 641, 1407
BspHI TCATGA 1 cut(s) 297
BspLI GGNNCC 4 cut(s) 281, 765, 3334, 3545
BspMAI CTGCAG 1 cut(s) 1855
BspMI ACCTGC 3 cut(s) 1505, 1595, 1731
BspPI GGATC 3 cut(s) 295, 353, 1202
BspQI GCTCTTC 1 cut(s) 198
BspT104I TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
BspT107I GGYRCC 3 cut(s) 279, 3332, 3543
BspTI CTTAAG 3 cut(s) 692, 2267, 2633
BspTNI GGTCTC 3 cut(s) 1613, 3188, 3314
BsrDI GCAATG 2 cut(s) 1054, 2177
BsrI ACTGG 7 cut(s) 341, 810, 1048, 1339, 2646, 2677, 3019
BssECI CCNNGG 2 cut(s) 714, 1158
BssNAI GTATAC 1 cut(s) 1117
BssNI GRCGYC 1 cut(s) 3333
BssSI CACGAG 2 cut(s) 515, 784
Bst1107I GTATAC 1 cut(s) 1117
Bst2BI CACGAG 2 cut(s) 515, 784
Bst2UI CCWGG 5 cut(s) 164, 284, 1159, 2744, 2787
Bst6I CTCTTC 8 cut(s) 198, 274, 890, 985, 993, 3366, 3435, 3499
BstACI GRCGYC 1 cut(s) 3333
BstAFI CTTAAG 3 cut(s) 692, 2267, 2633
BstBAI YACGTR 1 cut(s) 1424
BstBI TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
BstC8I GCNNGC 9 cut(s) 453, 1234, 1275, 1528, 1963, 2097, 2382, 3404, 3473
BstENI CCTNNNNNAGG 1 cut(s) 725
BstF5I GGATG 4 cut(s) 172, 362, 452, 528
BstFNI CGCG 2 cut(s) 641, 1407
BstH2I RGCGCY 1 cut(s) 3336
BstHHI GCGC 4 cut(s) 3335, 3394, 3463, 3594
BstMAI GTCTC 8 cut(s) 1034, 1457, 1613, 2289, 3041, 3188, 3314, 3548
BstMWI GCNNNNNNNGC 4 cut(s) 479, 688, 2722, 3268
BstNI CCWGG 5 cut(s) 164, 284, 1159, 2744, 2787
BstNSI RCATGY 1 cut(s) 1502
BstPAI GACNNNNGTC 1 cut(s) 584
BstSCI CCNGG 5 cut(s) 162, 282, 1157, 2742, 2785
BstSFI CTRYAG 2 cut(s) 1851, 2697
BstSLI GKGCMC 3 cut(s) 516, 576, 1528
BstUI CGCG 2 cut(s) 641, 1407
BstV1I GCAGC 4 cut(s) 467, 1245, 2472, 2604
BstV2I GAAGAC 3 cut(s) 337, 1571, 2569
BstX2I RGATCY 5 cut(s) 475, 1194, 1252, 1822, 3300
BstXI CCANNNNNNTGG 1 cut(s) 1704
BstYI RGATCY 5 cut(s) 475, 1194, 1252, 1822, 3300
BstZ17I GTATAC 1 cut(s) 1117
Bsu36I CCTNAGG 2 cut(s) 851, 1190
BsuI GTATCC 2 cut(s) 926, 1981
BsuRI GGCC 6 cut(s) 134, 2606, 2964, 3348, 3417, 3571
BtgZI GCGATG 1 cut(s) 1422
BtrI CACGTC 2 cut(s) 73, 1535
BtsCI GGATG 4 cut(s) 172, 362, 452, 528
BtsI GCAGTG 2 cut(s) 2008, 2511
BtsIMutI CAGTG 6 cut(s) 114, 552, 1663, 2008, 2511, 2998
BveI ACCTGC 3 cut(s) 1505, 1595, 1731
Cac8I GCNNGC 9 cut(s) 453, 1234, 1275, 1528, 1963, 2097, 2382, 3404, 3473
CaiI CAGNNNCTG 2 cut(s) 2485, 3172
CciI TCATGA 1 cut(s) 297
CfoI GCGC 4 cut(s) 3335, 3394, 3463, 3594
Cfr13I GGNCC 5 cut(s) 133, 318, 718, 2145, 3570
CseI GACGC 2 cut(s) 647, 3015
Csp6I GTAC 5 cut(s) 794, 1720, 2221, 2322, 3130
CspCI CAANNNNNGTGG 2 cut(s) 547, 582
CviQI GTAC 5 cut(s) 794, 1720, 2221, 2322, 3130
DinI GGCGCC 1 cut(s) 3334
DrdI GACNNNNNNGTC 1 cut(s) 293
DseDI GACNNNNNNGTC 1 cut(s) 293
EaeI YGGCCR 2 cut(s) 3346, 3415
Eam1104I CTCTTC 8 cut(s) 198, 274, 890, 985, 993, 3366, 3435, 3499
EarI CTCTTC 8 cut(s) 198, 274, 890, 985, 993, 3366, 3435, 3499
Eco147I AGGCCT 1 cut(s) 2606
Eco31I GGTCTC 3 cut(s) 1613, 3188, 3314
Eco47I GGWCC 3 cut(s) 318, 718, 2145
Eco57I CTGAAG 2 cut(s) 70, 1839
Eco81I CCTNAGG 2 cut(s) 851, 1190
EcoNI CCTNNNNNAGG 1 cut(s) 725
EcoO109I RGGNCCY 2 cut(s) 318, 718
EcoRI GAATTC 1 cut(s) 3077
EcoRII CCWGG 5 cut(s) 162, 282, 1157, 2742, 2785
EcoT22I ATGCAT 1 cut(s) 1941
EgeI GGCGCC 1 cut(s) 3334
EheI GGCGCC 1 cut(s) 3334
Esp3I CGTCTC 2 cut(s) 1457, 3548
FalI AAGNNNNNCTT 2 cut(s) 2949, 2981
FaqI GGGAC 7 cut(s) 1201, 1344, 1582, 2633, 2670, 2886, 2988
FauI CCCGC 1 cut(s) 444
FauNDI CATATG 1 cut(s) 2046
FbaI TGATCA 1 cut(s) 118
FblI GTMKAC 2 cut(s) 1116, 1552
Fnu4HI GCNGC 5 cut(s) 456, 1259, 2486, 2593, 2962
FokI GGATG 4 cut(s) 179, 349, 459, 515
Fsp4HI GCNGC 5 cut(s) 456, 1259, 2486, 2593, 2962
FspBI CTAG 7 cut(s) 479, 563, 774, 878, 1250, 2072, 2501
GlaI GCGC 4 cut(s) 3334, 3393, 3462, 3593
GluI GCNGC 5 cut(s) 456, 1259, 2486, 2593, 2962
GsaI CCCAGC 2 cut(s) 2520, 3282
GsuI CTGGAG 4 cut(s) 793, 1392, 2462, 2552
HaeII RGCGCY 1 cut(s) 3336
HaeIII GGCC 6 cut(s) 134, 2606, 2964, 3348, 3417, 3571
HapII CCGG 3 cut(s) 1974, 3092, 3466
HgaI GACGC 2 cut(s) 647, 3015
HhaI GCGC 4 cut(s) 3335, 3394, 3463, 3594
Hin1I GRCGYC 1 cut(s) 3333
Hin6I GCGC 4 cut(s) 3333, 3392, 3461, 3592
HinP1I GCGC 4 cut(s) 3333, 3392, 3461, 3592
HincII GTYRAC 2 cut(s) 142, 960
HindII GTYRAC 2 cut(s) 142, 960
HindIII AAGCTT 4 cut(s) 1230, 1963, 2085, 2543
HpaII CCGG 3 cut(s) 1974, 3092, 3466
Hpy166II GTNNAC 8 cut(s) 142, 960, 1117, 1526, 1553, 1804, 2148, 3485
Hpy8I GTNNAC 8 cut(s) 142, 960, 1117, 1526, 1553, 1804, 2148, 3485
Hpy99I CGWCG 2 cut(s) 3236, 3332
HpyCH4IV ACGT 4 cut(s) 72, 354, 1423, 1534
HpyF10VI GCNNNNNNNGC 4 cut(s) 479, 688, 2722, 3268
HpySE526I ACGT 4 cut(s) 72, 354, 1423, 1534
Hsp92I GRCGYC 1 cut(s) 3333
HspAI GCGC 4 cut(s) 3333, 3392, 3461, 3592
KasI GGCGCC 1 cut(s) 3332
Kpn2I TCCGGA 2 cut(s) 1973, 3091
Ksp22I TGATCA 1 cut(s) 118
LguI GCTCTTC 1 cut(s) 198
LmnI GCTCC 5 cut(s) 1373, 2730, 3259, 3399, 3468
Lsp1109I GCAGC 4 cut(s) 467, 1245, 2472, 2604
LweI GCATC 3 cut(s) 2436, 2472, 3389
MaeI CTAG 7 cut(s) 479, 563, 774, 878, 1250, 2072, 2501
MaeII ACGT 4 cut(s) 72, 354, 1423, 1534
MfeI CAATTG 2 cut(s) 2757, 3368
MflI RGATCY 5 cut(s) 475, 1194, 1252, 1822, 3300
MhlI GDGCHC 4 cut(s) 516, 576, 1378, 1528
MlsI TGGCCA 2 cut(s) 3348, 3417
MluNI TGGCCA 2 cut(s) 3348, 3417
Mly113I GGCGCC 1 cut(s) 3333
MlyI GAGTC 8 cut(s) 236, 527, 827, 1223, 1376, 2023, 2160, 3004
MmeI TCCRAC 4 cut(s) 348, 2752, 2920, 3593
Mox20I TGGCCA 2 cut(s) 3348, 3417
Mph1103I ATGCAT 1 cut(s) 1941
MroI TCCGGA 2 cut(s) 1973, 3091
MroXI GAANNNNTTC 1 cut(s) 3087
MscI TGGCCA 2 cut(s) 3348, 3417
MslI CAYNNNNRTG 3 cut(s) 633, 1209, 1460
Msp20I TGGCCA 2 cut(s) 3348, 3417
MspA1I CMGCKG 1 cut(s) 2595
MspCI CTTAAG 3 cut(s) 692, 2267, 2633
MspI CCGG 3 cut(s) 1974, 3092, 3466
MspR9I CCNGG 5 cut(s) 164, 284, 1159, 2744, 2787
MunI CAATTG 2 cut(s) 2757, 3368
Mva1269I GAATGC 2 cut(s) 2208, 3157
MvaI CCWGG 5 cut(s) 164, 284, 1159, 2744, 2787
MvnI CGCG 2 cut(s) 641, 1407
MwoI GCNNNNNNNGC 4 cut(s) 479, 688, 2722, 3268
NarI GGCGCC 1 cut(s) 3333
NdeI CATATG 1 cut(s) 2046
NlaIV GGNNCC 4 cut(s) 281, 765, 3334, 3545
NmuCI GTSAC 8 cut(s) 17, 228, 1396, 1658, 1685, 2033, 2945, 2996
NsiI ATGCAT 1 cut(s) 1941
NspI RCATGY 1 cut(s) 1502
NspV TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
PagI TCATGA 1 cut(s) 297
PceI AGGCCT 1 cut(s) 2606
PciSI GCTCTTC 1 cut(s) 198
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PctI GAATGC 2 cut(s) 2208, 3157
PdmI GAANNNNTTC 1 cut(s) 3087
PfeI GAWTC 8 cut(s) 550, 881, 1063, 2006, 2243, 3102, 3169, 3376
PflMI CCANNNNNTGG 2 cut(s) 3413, 3482
PfoI TCCNGGA 1 cut(s) 162
PkrI GCNGC 5 cut(s) 457, 1260, 2487, 2594, 2963
PleI GAGTC 8 cut(s) 235, 526, 827, 1222, 1375, 2023, 2160, 3003
PluTI GGCGCC 1 cut(s) 3336
PpsI GAGTC 8 cut(s) 235, 526, 827, 1222, 1375, 2023, 2160, 3003
Ppu21I YACGTR 1 cut(s) 1424
PpuMI RGGWCCY 2 cut(s) 318, 718
PshAI GACNNNNGTC 1 cut(s) 584
PshBI ATTAAT 2 cut(s) 842, 2691
PsiI TTATAA 2 cut(s) 1335, 3446
Psp1406I AACGTT 1 cut(s) 354
Psp5II RGGWCCY 2 cut(s) 318, 718
Psp6I CCWGG 5 cut(s) 162, 282, 1157, 2742, 2785
PspFI CCCAGC 2 cut(s) 2516, 3278
PspGI CCWGG 5 cut(s) 162, 282, 1157, 2742, 2785
PspN4I GGNNCC 4 cut(s) 281, 765, 3334, 3545
PspPI GGNCC 5 cut(s) 133, 318, 718, 2145, 3570
PspPPI RGGWCCY 2 cut(s) 318, 718
PsrI GAACNNNNNNTAC 2 cut(s) 849, 881
PstI CTGCAG 1 cut(s) 1855
PstNI CAGNNNCTG 2 cut(s) 2485, 3172
PsuI RGATCY 5 cut(s) 475, 1194, 1252, 1822, 3300
RsaI GTAC 5 cut(s) 795, 1721, 2222, 2323, 3131
RsaNI GTAC 5 cut(s) 794, 1720, 2221, 2322, 3130
RseI CAYNNNNRTG 3 cut(s) 633, 1209, 1460
SapI GCTCTTC 1 cut(s) 198
SatI GCNGC 5 cut(s) 456, 1259, 2486, 2593, 2962
Sau96I GGNCC 5 cut(s) 133, 318, 718, 2145, 3570
ScaI AGTACT 1 cut(s) 3131
SchI GAGTC 8 cut(s) 236, 527, 827, 1223, 1376, 2023, 2160, 3004
ScrFI CCNGG 5 cut(s) 164, 284, 1159, 2744, 2787
SduI GDGCHC 4 cut(s) 516, 576, 1378, 1528
SfaNI GCATC 3 cut(s) 2436, 2472, 3389
SfcI CTRYAG 2 cut(s) 1851, 2697
SfoI GGCGCC 1 cut(s) 3334
SfuI TTCGAA 5 cut(s) 154, 254, 1564, 3081, 3433
SinI GGWCC 3 cut(s) 318, 718, 2145
SmiMI CAYNNNNRTG 3 cut(s) 633, 1209, 1460
SseBI AGGCCT 1 cut(s) 2606
SsiI CCGC 5 cut(s) 451, 641, 2595, 2961, 3254
SspDI GGCGCC 1 cut(s) 3332
SspI AATATT 1 cut(s) 2801
SspMI CTAG 7 cut(s) 479, 563, 774, 878, 1250, 2072, 2501
StuI AGGCCT 1 cut(s) 2606
StyD4I CCNGG 5 cut(s) 162, 282, 1157, 2742, 2785
TaiI ACGT 4 cut(s) 75, 357, 1426, 1537
TaqII GACCGA 1 cut(s) 596
TatI WGTACW 2 cut(s) 2321, 3129
TauI GCSGC 1 cut(s) 2964
TfiI GAWTC 8 cut(s) 550, 881, 1063, 2006, 2243, 3102, 3169, 3376
TscAI CASTG 6 cut(s) 121, 552, 1663, 2008, 2518, 3005
TseFI GTSAC 8 cut(s) 17, 228, 1396, 1658, 1685, 2033, 2945, 2996
TseI GCWGC 4 cut(s) 455, 1258, 2485, 2592
Tsp45I GTSAC 8 cut(s) 17, 228, 1396, 1658, 1685, 2033, 2945, 2996
TspDTI ATGAA 9 cut(s) 503, 516, 517, 1011, 1065, 1425, 1455, 1902, 2970
TspRI CASTG 6 cut(s) 121, 552, 1663, 2008, 2518, 3005
Van91I CCANNNNNTGG 2 cut(s) 3413, 3482
Vha464I CTTAAG 3 cut(s) 692, 2267, 2633
VneI GTGCAC 1 cut(s) 1524
VpaK11BI GGWCC 3 cut(s) 318, 718, 2145
VspI ATTAAT 2 cut(s) 842, 2691
XagI CCTNNNNNAGG 1 cut(s) 725
XapI RAATTY 4 cut(s) 490, 1178, 2900, 3077
XceI RCATGY 1 cut(s) 1502
XcmI CCANNNNNNNNNTGG 2 cut(s) 280, 2139
XmiI GTMKAC 2 cut(s) 1116, 1552
XmnI GAANNNNTTC 1 cut(s) 3087
XspI CTAG 7 cut(s) 479, 563, 774, 878, 1250, 2072, 2501
ZrmI AGTACT 1 cut(s) 3131
Zsp2I ATGCAT 1 cut(s) 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.