disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 18 - 104 | 1.4e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 175 - 346 | 1.5e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 432 - 497 | 9.2e-27 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 565 - 893 | 5.5e-25 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 682 - 804 | 6.2e-36 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1643 |
| Acc36I | ACCTGC | 2 cut(s) | 2470, 2629 |
| Acc65I | GGTACC | 1 cut(s) | 1788 |
| AccB1I | GGYRCC | 2 cut(s) | 882, 1788 |
| AccBSI | CCGCTC | 1 cut(s) | 29 |
| AccI | GTMKAC | 3 cut(s) | 372, 454, 3217 |
| AccIII | TCCGGA | 2 cut(s) | 1258, 2914 |
| AciI | CCGC | 8 cut(s) | 27, 286, 812, 927, 2494, 2503, 2547, 3208 |
| AclI | AACGTT | 1 cut(s) | 1859 |
| AclWI | GGATC | 3 cut(s) | 143, 620, 1049 |
| AcoI | YGGCCR | 1 cut(s) | 1344 |
| AcsI | RAATTY | 9 cut(s) | 302, 390, 704, 1508, 2696, 2900, 2927, 2969, 3044 |
| AcuI | CTGAAG | 2 cut(s) | 1286, 3241 |
| AcyI | GRCGYC | 2 cut(s) | 585, 883 |
| AfaI | GTAC | 9 cut(s) | 327, 961, 1250, 1683, 1790, 1948, 2253, 2278, 2643 |
| AflII | CTTAAG | 1 cut(s) | 877 |
| AflIII | ACRYGT | 1 cut(s) | 199 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1006 |
| AjnI | CCWGG | 2 cut(s) | 2287, 2527 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 288, 320, 1364, 1396 |
| Alw21I | GWGCWC | 1 cut(s) | 904 |
| Alw26I | GTCTC | 5 cut(s) | 1139, 1260, 2333, 2880, 3099 |
| AlwI | GGATC | 3 cut(s) | 143, 620, 1049 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3174 |
| Ama87I | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| Aor13HI | TCCGGA | 2 cut(s) | 1258, 2914 |
| AoxI | GGCC | 4 cut(s) | 231, 1102, 1344, 2133 |
| ApeKI | GCWGC | 5 cut(s) | 664, 1115, 2779, 3307, 3310 |
| ApoI | RAATTY | 9 cut(s) | 302, 390, 704, 1508, 2696, 2900, 2927, 2969, 3044 |
| AseI | ATTAAT | 1 cut(s) | 1328 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3291 |
| Asp718I | GGTACC | 1 cut(s) | 1788 |
| AspLEI | GCGC | 5 cut(s) | 885, 1644, 1929, 2788, 3007 |
| AspS9I | GGNCC | 1 cut(s) | 250 |
| AsuC2I | CCSGG | 1 cut(s) | 2035 |
| AsuHPI | GGTGA | 5 cut(s) | 916, 2021, 2195, 2546, 3220 |
| AvaI | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| AvaII | GGWCC | 1 cut(s) | 250 |
| BaeGI | GKGCMC | 1 cut(s) | 2841 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1482, 1515, 2260, 2293 |
| BanI | GGYRCC | 2 cut(s) | 882, 1788 |
| BanII | GRGCYC | 1 cut(s) | 904 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1341, 1373 |
| BauI | CACGAG | 1 cut(s) | 218 |
| BbsI | GAAGAC | 6 cut(s) | 1005, 1084, 1379, 1437, 1533, 1918 |
| Bbv12I | GWGCWC | 1 cut(s) | 904 |
| BbvCI | CCTCAGC | 2 cut(s) | 246, 2118 |
| BbvI | GCAGC | 5 cut(s) | 676, 1102, 2766, 3294, 3297 |
| BceAI | ACGGC | 2 cut(s) | 218, 3133 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2654, 2688 |
| BciT130I | CCWGG | 2 cut(s) | 2289, 2529 |
| BciVI | GTATCC | 1 cut(s) | 2261 |
| BcnI | CCSGG | 1 cut(s) | 2035 |
| BcoDI | GTCTC | 5 cut(s) | 1139, 1260, 2333, 2880, 3099 |
| BfaI | CTAG | 3 cut(s) | 1377, 1886, 2219 |
| BfmI | CTRYAG | 3 cut(s) | 369, 2228, 2259 |
| BfoI | RGCGCY | 2 cut(s) | 886, 3008 |
| BfrI | CTTAAG | 1 cut(s) | 877 |
| BfuAI | ACCTGC | 2 cut(s) | 2470, 2629 |
| BfuI | GTATCC | 1 cut(s) | 2261 |
| BglII | AGATCT | 2 cut(s) | 1351, 1990 |
| BisI | GCNGC | 6 cut(s) | 27, 665, 1116, 2780, 3308, 3311 |
| BlpI | GCTNAGC | 2 cut(s) | 404, 1238 |
| BlsI | GCNGC | 6 cut(s) | 28, 666, 1117, 2781, 3309, 3312 |
| BmcAI | AGTACT | 2 cut(s) | 1250, 2253 |
| Bme1390I | CCNGG | 3 cut(s) | 2035, 2289, 2529 |
| Bme18I | GGWCC | 1 cut(s) | 250 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1006 |
| BmeT110I | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| BmgT120I | GGNCC | 1 cut(s) | 250 |
| BmiI | GGNNCC | 3 cut(s) | 25, 884, 1790 |
| BmrFI | CCNGG | 3 cut(s) | 2035, 2289, 2529 |
| BpiI | GAAGAC | 6 cut(s) | 1005, 1084, 1379, 1437, 1533, 1918 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 15, 47, 2297, 2329 |
| BpmI | CTGGAG | 6 cut(s) | 918, 1085, 1524, 2550, 2600, 3196 |
| Bpu10I | CCTNAGC | 2 cut(s) | 246, 2118 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 404, 1238 |
| BpuEI | CTTGAG | 6 cut(s) | 107, 416, 1013, 2041, 2357, 2654 |
| BpuMI | CCSGG | 1 cut(s) | 2035 |
| Bsa29I | ATCGAT | 1 cut(s) | 2193 |
| BsaAI | YACGTR | 3 cut(s) | 191, 1498, 1733 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1059, 3026, 3071 |
| BsaHI | GRCGYC | 2 cut(s) | 585, 883 |
| BsaI | GGTCTC | 1 cut(s) | 1139 |
| BsaJI | CCNNGG | 3 cut(s) | 2034, 2527, 2986 |
| BsaWI | WCCGGW | 2 cut(s) | 1258, 2914 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1677, 1707 |
| Bse118I | RCCGGY | 1 cut(s) | 1225 |
| Bse1I | ACTGG | 3 cut(s) | 261, 1246, 2259 |
| Bse3DI | GCAATG | 1 cut(s) | 473 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1059, 3026, 3071 |
| BseAI | TCCGGA | 2 cut(s) | 1258, 2914 |
| BseBI | CCWGG | 2 cut(s) | 2289, 2529 |
| BseCI | ATCGAT | 1 cut(s) | 2193 |
| BseDI | CCNNGG | 3 cut(s) | 2034, 2527, 2986 |
| BseGI | GGATG | 8 cut(s) | 1347, 2128, 2714, 2933, 2966, 3253, 3269, 3346 |
| BseJI | GATNNNNATC | 3 cut(s) | 1059, 3026, 3071 |
| BseMI | GCAATG | 1 cut(s) | 473 |
| BseMII | CTCAG | 7 cut(s) | 86, 237, 1881, 2109, 2430, 2477, 3181 |
| BseNI | ACTGG | 3 cut(s) | 261, 1246, 2259 |
| BseRI | GAGGAG | 3 cut(s) | 2813, 3006, 3077 |
| BseSI | GKGCMC | 1 cut(s) | 2841 |
| BseXI | GCAGC | 5 cut(s) | 676, 1102, 2766, 3294, 3297 |
| BseYI | CCCAGC | 1 cut(s) | 633 |
| BshFI | GGCC | 4 cut(s) | 233, 1104, 1346, 2135 |
| BshNI | GGYRCC | 2 cut(s) | 882, 1788 |
| BshVI | ATCGAT | 1 cut(s) | 2193 |
| BsiHKAI | GWGCWC | 1 cut(s) | 904 |
| BsiHKCI | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| BsiSI | CCGG | 4 cut(s) | 1226, 1259, 2034, 2915 |
| BslFI | GGGAC | 2 cut(s) | 2159, 2574 |
| BsmAI | GTCTC | 5 cut(s) | 1139, 1260, 2333, 2880, 3099 |
| BsmBI | CGTCTC | 1 cut(s) | 2880 |
| BsmFI | GGGAC | 2 cut(s) | 2159, 2574 |
| BsmI | GAATGC | 1 cut(s) | 2693 |
| BsnI | GGCC | 4 cut(s) | 233, 1104, 1346, 2135 |
| Bso31I | GGTCTC | 1 cut(s) | 1139 |
| BsoBI | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| Bsp1286I | GDGCHC | 2 cut(s) | 904, 2841 |
| Bsp13I | TCCGGA | 2 cut(s) | 1258, 2914 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 404, 1238 |
| Bsp19I | CCATGG | 1 cut(s) | 2986 |
| BspACI | CCGC | 8 cut(s) | 27, 286, 812, 927, 2494, 2503, 2547, 3208 |
| BspANI | GGCC | 4 cut(s) | 233, 1104, 1346, 2135 |
| BspCNI | CTCAG | 7 cut(s) | 85, 238, 1882, 2110, 2431, 2478, 3180 |
| BspDI | ATCGAT | 1 cut(s) | 2193 |
| BspEI | TCCGGA | 2 cut(s) | 1258, 2914 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 3 cut(s) | 25, 884, 1790 |
| BspMI | ACCTGC | 2 cut(s) | 2470, 2629 |
| BspPI | GGATC | 3 cut(s) | 143, 620, 1049 |
| BspT107I | GGYRCC | 2 cut(s) | 882, 1788 |
| BspTI | CTTAAG | 1 cut(s) | 877 |
| BspTNI | GGTCTC | 1 cut(s) | 1139 |
| BsrBI | CCGCTC | 1 cut(s) | 29 |
| BsrDI | GCAATG | 1 cut(s) | 473 |
| BsrFI | RCCGGY | 1 cut(s) | 1225 |
| BsrI | ACTGG | 3 cut(s) | 261, 1246, 2259 |
| BssAI | RCCGGY | 1 cut(s) | 1225 |
| BssECI | CCNNGG | 3 cut(s) | 2034, 2527, 2986 |
| BssNI | GRCGYC | 2 cut(s) | 585, 883 |
| BssSI | CACGAG | 1 cut(s) | 218 |
| BssT1I | CCWWGG | 1 cut(s) | 2986 |
| Bst2BI | CACGAG | 1 cut(s) | 218 |
| Bst2UI | CCWGG | 2 cut(s) | 2289, 2529 |
| Bst4CI | ACNGT | 8 cut(s) | 13, 1004, 1425, 1788, 1834, 2588, 2613, 3203 |
| Bst6I | CTCTTC | 4 cut(s) | 511, 969, 2874, 3294 |
| BstACI | GRCGYC | 2 cut(s) | 585, 883 |
| BstAFI | CTTAAG | 1 cut(s) | 877 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1025 |
| BstBAI | YACGTR | 3 cut(s) | 191, 1498, 1733 |
| BstC8I | GCNNGC | 5 cut(s) | 1227, 2367, 2570, 2784, 3003 |
| BstDSI | CCRYGG | 1 cut(s) | 2986 |
| BstF5I | GGATG | 8 cut(s) | 1347, 2128, 2714, 2933, 2966, 3253, 3269, 3346 |
| BstH2I | RGCGCY | 2 cut(s) | 886, 3008 |
| BstHHI | GCGC | 5 cut(s) | 885, 1644, 1929, 2788, 3007 |
| BstMAI | GTCTC | 5 cut(s) | 1139, 1260, 2333, 2880, 3099 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 220, 673, 1025, 2123, 2132, 2509, 2785, 2857 |
| BstNI | CCWGG | 2 cut(s) | 2289, 2529 |
| BstNSI | RCATGY | 2 cut(s) | 203, 1028 |
| BstSCI | CCNGG | 3 cut(s) | 2033, 2287, 2527 |
| BstSFI | CTRYAG | 3 cut(s) | 369, 2228, 2259 |
| BstSLI | GKGCMC | 1 cut(s) | 2841 |
| BstSNI | TACGTA | 2 cut(s) | 191, 1498 |
| BstV1I | GCAGC | 5 cut(s) | 676, 1102, 2766, 3294, 3297 |
| BstV2I | GAAGAC | 6 cut(s) | 1005, 1084, 1379, 1437, 1533, 1918 |
| BstX2I | RGATCY | 3 cut(s) | 1054, 1351, 1990 |
| BstYI | RGATCY | 3 cut(s) | 1054, 1351, 1990 |
| Bsu15I | ATCGAT | 1 cut(s) | 2193 |
| BsuI | GTATCC | 1 cut(s) | 2261 |
| BsuRI | GGCC | 4 cut(s) | 233, 1104, 1346, 2135 |
| BsuTUI | ATCGAT | 1 cut(s) | 2193 |
| BtgI | CCRYGG | 1 cut(s) | 2986 |
| BtgZI | GCGATG | 1 cut(s) | 1656 |
| BtsCI | GGATG | 8 cut(s) | 1347, 2128, 2714, 2933, 2966, 3253, 3269, 3346 |
| BtsI | GCAGTG | 1 cut(s) | 3053 |
| BtsIMutI | CAGTG | 4 cut(s) | 160, 2436, 2841, 3053 |
| BveI | ACCTGC | 2 cut(s) | 2470, 2629 |
| Cac8I | GCNNGC | 5 cut(s) | 1227, 2367, 2570, 2784, 3003 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3174 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 5 cut(s) | 885, 1644, 1929, 2788, 3007 |
| Cfr10I | RCCGGY | 1 cut(s) | 1225 |
| Cfr13I | GGNCC | 1 cut(s) | 250 |
| ClaI | ATCGAT | 1 cut(s) | 2193 |
| CseI | GACGC | 1 cut(s) | 574 |
| Csp6I | GTAC | 9 cut(s) | 326, 960, 1249, 1682, 1789, 1947, 2252, 2277, 2642 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1714, 1749 |
| CviQI | GTAC | 9 cut(s) | 326, 960, 1249, 1682, 1789, 1947, 2252, 2277, 2642 |
| DinI | GGCGCC | 1 cut(s) | 884 |
| DraI | TTTAAA | 3 cut(s) | 981, 2470, 2905 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1006 |
| EaeI | YGGCCR | 1 cut(s) | 1344 |
| Eam1104I | CTCTTC | 4 cut(s) | 511, 969, 2874, 3294 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1006 |
| EarI | CTCTTC | 4 cut(s) | 511, 969, 2874, 3294 |
| EciI | GGCGGA | 2 cut(s) | 301, 2562 |
| Ecl136II | GAGCTC | 1 cut(s) | 902 |
| Eco105I | TACGTA | 2 cut(s) | 191, 1498 |
| Eco130I | CCWWGG | 1 cut(s) | 2986 |
| Eco147I | AGGCCT | 1 cut(s) | 1104 |
| Eco24I | GRGCYC | 1 cut(s) | 904 |
| Eco31I | GGTCTC | 1 cut(s) | 1139 |
| Eco32I | GATATC | 1 cut(s) | 1744 |
| Eco47I | GGWCC | 1 cut(s) | 250 |
| Eco53kI | GAGCTC | 1 cut(s) | 902 |
| Eco57I | CTGAAG | 2 cut(s) | 1286, 3241 |
| Eco88I | CYCGRG | 3 cut(s) | 34, 678, 3089 |
| EcoICRI | GAGCTC | 1 cut(s) | 902 |
| EcoO109I | RGGNCCY | 1 cut(s) | 250 |
| EcoRII | CCWGG | 2 cut(s) | 2287, 2527 |
| EcoRV | GATATC | 1 cut(s) | 1744 |
| EcoT14I | CCWWGG | 1 cut(s) | 2986 |
| EcoT22I | ATGCAT | 3 cut(s) | 742, 1470, 1482 |
| EcoT38I | GRGCYC | 1 cut(s) | 904 |
| EgeI | GGCGCC | 1 cut(s) | 884 |
| EheI | GGCGCC | 1 cut(s) | 884 |
| ErhI | CCWWGG | 1 cut(s) | 2986 |
| Esp3I | CGTCTC | 1 cut(s) | 2880 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 417, 449, 1388, 1420, 1671, 1703 |
| FaqI | GGGAC | 2 cut(s) | 2159, 2574 |
| FauI | CCCGC | 2 cut(s) | 805, 2496 |
| FauNDI | CATATG | 1 cut(s) | 1190 |
| FblI | GTMKAC | 3 cut(s) | 372, 454, 3217 |
| Fnu4HI | GCNGC | 6 cut(s) | 27, 665, 1116, 2780, 3308, 3311 |
| FokI | GGATG | 8 cut(s) | 1354, 2135, 2701, 2920, 2973, 3260, 3276, 3333 |
| FriOI | GRGCYC | 1 cut(s) | 904 |
| Fsp4HI | GCNGC | 6 cut(s) | 27, 665, 1116, 2780, 3308, 3311 |
| FspBI | CTAG | 3 cut(s) | 1377, 1886, 2219 |
| FspI | TGCGCA | 1 cut(s) | 1643 |
| GlaI | GCGC | 5 cut(s) | 884, 1643, 1928, 2787, 3006 |
| GluI | GCNGC | 6 cut(s) | 27, 665, 1116, 2780, 3308, 3311 |
| GsaI | CCCAGC | 1 cut(s) | 637 |
| GsuI | CTGGAG | 6 cut(s) | 918, 1085, 1524, 2550, 2600, 3196 |
| HaeII | RGCGCY | 2 cut(s) | 886, 3008 |
| HaeIII | GGCC | 4 cut(s) | 233, 1104, 1346, 2135 |
| HapII | CCGG | 4 cut(s) | 1226, 1259, 2034, 2915 |
| HgaI | GACGC | 1 cut(s) | 574 |
| HhaI | GCGC | 5 cut(s) | 885, 1644, 1929, 2788, 3007 |
| Hin1I | GRCGYC | 2 cut(s) | 585, 883 |
| Hin6I | GCGC | 5 cut(s) | 883, 1642, 1927, 2786, 3005 |
| HinP1I | GCGC | 5 cut(s) | 883, 1642, 1927, 2786, 3005 |
| HincII | GTYRAC | 1 cut(s) | 9 |
| HindII | GTYRAC | 1 cut(s) | 9 |
| HindIII | AAGCTT | 1 cut(s) | 406 |
| HpaII | CCGG | 4 cut(s) | 1226, 1259, 2034, 2915 |
| HphI | GGTGA | 5 cut(s) | 916, 2021, 2195, 2546, 3220 |
| Hpy166II | GTNNAC | 5 cut(s) | 9, 373, 455, 1806, 3218 |
| Hpy8I | GTNNAC | 5 cut(s) | 9, 373, 455, 1806, 3218 |
| HpyCH4III | ACNGT | 8 cut(s) | 13, 1004, 1425, 1788, 1834, 2588, 2613, 3203 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 220, 673, 1025, 2123, 2132, 2509, 2785, 2857 |
| Hsp92I | GRCGYC | 2 cut(s) | 585, 883 |
| HspAI | GCGC | 5 cut(s) | 883, 1642, 1927, 2786, 3005 |
| KasI | GGCGCC | 1 cut(s) | 882 |
| Kpn2I | TCCGGA | 2 cut(s) | 1258, 2914 |
| KpnI | GGTACC | 1 cut(s) | 1792 |
| KroI | GCCGGC | 1 cut(s) | 1225 |
| KroNI | GCCGGC | 1 cut(s) | 1227 |
| LmnI | GCTCC | 4 cut(s) | 23, 899, 1261, 2865 |
| Lsp1109I | GCAGC | 5 cut(s) | 676, 1102, 2766, 3294, 3297 |
| MaeI | CTAG | 3 cut(s) | 1377, 1886, 2219 |
| MbiI | CCGCTC | 1 cut(s) | 29 |
| MfeI | CAATTG | 1 cut(s) | 545 |
| MflI | RGATCY | 3 cut(s) | 1054, 1351, 1990 |
| MhlI | GDGCHC | 2 cut(s) | 904, 2841 |
| Mly113I | GGCGCC | 1 cut(s) | 883 |
| MlyI | GAGTC | 4 cut(s) | 374, 902, 2315, 3101 |
| MmeI | TCCRAC | 4 cut(s) | 45, 1362, 1372, 2356 |
| Mph1103I | ATGCAT | 3 cut(s) | 742, 1470, 1482 |
| MroI | TCCGGA | 2 cut(s) | 1258, 2914 |
| MroNI | GCCGGC | 1 cut(s) | 1225 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3291 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2073 |
| MspCI | CTTAAG | 1 cut(s) | 877 |
| MspI | CCGG | 4 cut(s) | 1226, 1259, 2034, 2915 |
| MspR9I | CCNGG | 3 cut(s) | 2035, 2289, 2529 |
| MunI | CAATTG | 1 cut(s) | 545 |
| Mva1269I | GAATGC | 1 cut(s) | 2693 |
| MvaI | CCWGG | 2 cut(s) | 2289, 2529 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 220, 673, 1025, 2123, 2132, 2509, 2785, 2857 |
| NaeI | GCCGGC | 1 cut(s) | 1227 |
| NarI | GGCGCC | 1 cut(s) | 883 |
| NciI | CCSGG | 1 cut(s) | 2035 |
| NcoI | CCATGG | 1 cut(s) | 2986 |
| NdeI | CATATG | 1 cut(s) | 1190 |
| NgoMIV | GCCGGC | 1 cut(s) | 1225 |
| NlaIV | GGNNCC | 3 cut(s) | 25, 884, 1790 |
| NmeAIII | GCCGAG | 2 cut(s) | 199, 2237 |
| NmuCI | GTSAC | 7 cut(s) | 745, 922, 1184, 2159, 2183, 2323, 3051 |
| NsbI | TGCGCA | 1 cut(s) | 1643 |
| NsiI | ATGCAT | 3 cut(s) | 742, 1470, 1482 |
| NspI | RCATGY | 2 cut(s) | 203, 1028 |
| PaeR7I | CTCGAG | 1 cut(s) | 3089 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 1104 |
| PciI | ACATGT | 1 cut(s) | 199 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 849 |
| PctI | GAATGC | 1 cut(s) | 2693 |
| PdiI | GCCGGC | 1 cut(s) | 1227 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3291 |
| PkrI | GCNGC | 6 cut(s) | 28, 666, 1117, 2781, 3309, 3312 |
| PleI | GAGTC | 4 cut(s) | 373, 901, 2314, 3100 |
| PluTI | GGCGCC | 1 cut(s) | 886 |
| PpsI | GAGTC | 4 cut(s) | 373, 901, 2314, 3100 |
| Ppu21I | YACGTR | 3 cut(s) | 191, 1498, 1733 |
| PpuMI | RGGWCCY | 1 cut(s) | 250 |
| PscI | ACATGT | 1 cut(s) | 199 |
| PshBI | ATTAAT | 1 cut(s) | 1328 |
| Psp124BI | GAGCTC | 1 cut(s) | 904 |
| Psp1406I | AACGTT | 1 cut(s) | 1859 |
| Psp5II | RGGWCCY | 1 cut(s) | 250 |
| Psp6I | CCWGG | 2 cut(s) | 2287, 2527 |
| PspFI | CCCAGC | 1 cut(s) | 633 |
| PspGI | CCWGG | 2 cut(s) | 2287, 2527 |
| PspN4I | GGNNCC | 3 cut(s) | 25, 884, 1790 |
| PspPI | GGNCC | 1 cut(s) | 250 |
| PspPPI | RGGWCCY | 1 cut(s) | 250 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 842, 874 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3174 |
| PsuI | RGATCY | 3 cut(s) | 1054, 1351, 1990 |
| RsaI | GTAC | 9 cut(s) | 327, 961, 1250, 1683, 1790, 1948, 2253, 2278, 2643 |
| RsaNI | GTAC | 9 cut(s) | 326, 960, 1249, 1682, 1789, 1947, 2252, 2277, 2642 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2073 |
| SacI | GAGCTC | 1 cut(s) | 904 |
| SatI | GCNGC | 6 cut(s) | 27, 665, 1116, 2780, 3308, 3311 |
| Sau96I | GGNCC | 1 cut(s) | 250 |
| ScaI | AGTACT | 2 cut(s) | 1250, 2253 |
| SchI | GAGTC | 4 cut(s) | 374, 902, 2315, 3101 |
| ScrFI | CCNGG | 3 cut(s) | 2035, 2289, 2529 |
| SduI | GDGCHC | 2 cut(s) | 904, 2841 |
| SfcI | CTRYAG | 3 cut(s) | 369, 2228, 2259 |
| SfoI | GGCGCC | 1 cut(s) | 884 |
| Sfr274I | CTCGAG | 1 cut(s) | 3089 |
| SinI | GGWCC | 1 cut(s) | 250 |
| SlaI | CTCGAG | 1 cut(s) | 3089 |
| SmiI | ATTTAAAT | 2 cut(s) | 2470, 2905 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2073 |
| SmlI | CTYRAG | 8 cut(s) | 122, 395, 877, 992, 2020, 2336, 2633, 3089 |
| SmoI | CTYRAG | 8 cut(s) | 122, 395, 877, 992, 2020, 2336, 2633, 3089 |
| SnaBI | TACGTA | 2 cut(s) | 191, 1498 |
| SseBI | AGGCCT | 1 cut(s) | 1104 |
| SsiI | CCGC | 8 cut(s) | 27, 286, 812, 927, 2494, 2503, 2547, 3208 |
| SspDI | GGCGCC | 1 cut(s) | 882 |
| SspI | AATATT | 3 cut(s) | 865, 1586, 2704 |
| SspMI | CTAG | 3 cut(s) | 1377, 1886, 2219 |
| SstI | GAGCTC | 1 cut(s) | 904 |
| StuI | AGGCCT | 1 cut(s) | 1104 |
| StyD4I | CCNGG | 3 cut(s) | 2033, 2287, 2527 |
| StyI | CCWWGG | 1 cut(s) | 2986 |
| SwaI | ATTTAAAT | 2 cut(s) | 2470, 2905 |
| TaaI | ACNGT | 8 cut(s) | 13, 1004, 1425, 1788, 1834, 2588, 2613, 3203 |
| TaqI | TCGA | 5 cut(s) | 891, 1763, 2193, 2664, 3090 |
| TatI | WGTACW | 2 cut(s) | 1248, 2251 |
| TauI | GCSGC | 1 cut(s) | 29 |
| TscAI | CASTG | 4 cut(s) | 160, 2436, 2841, 3060 |
| TseFI | GTSAC | 7 cut(s) | 745, 922, 1184, 2159, 2183, 2323, 3051 |
| TseI | GCWGC | 5 cut(s) | 664, 1115, 2779, 3307, 3310 |
| Tsp45I | GTSAC | 7 cut(s) | 745, 922, 1184, 2159, 2183, 2323, 3051 |
| TspDTI | ATGAA | 9 cut(s) | 79, 400, 717, 1450, 1578, 1639, 1641, 2075, 3288 |
| TspGWI | ACGGA | 4 cut(s) | 1763, 2286, 2711, 2862 |
| TspRI | CASTG | 4 cut(s) | 160, 2436, 2841, 3060 |
| Vha464I | CTTAAG | 1 cut(s) | 877 |
| VpaK11BI | GGWCC | 1 cut(s) | 250 |
| VspI | ATTAAT | 1 cut(s) | 1328 |
| XapI | RAATTY | 9 cut(s) | 302, 390, 704, 1508, 2696, 2900, 2927, 2969, 3044 |
| XceI | RCATGY | 2 cut(s) | 203, 1028 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 601 |
| XhoI | CTCGAG | 1 cut(s) | 3089 |
| XmiI | GTMKAC | 3 cut(s) | 372, 454, 3217 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3291 |
| XspI | CTAG | 3 cut(s) | 1377, 1886, 2219 |
| ZrmI | AGTACT | 2 cut(s) | 1250, 2253 |
| Zsp2I | ATGCAT | 3 cut(s) | 742, 1470, 1482 |