RchiOBHm_Chr1g0347701

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
40401265 .. 40403303
2039 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57380

Sequence Viewer

Length: 1983 bp
ATGTTTTTAGGATCTCAAAACACATTTATGAGTCCCTCATCAGAAGCTTGTGAAATCACAAACCTAGATCTGCTTCAGTCAAAGTTGCAGGAAACTTTGGTGGGAAGAAGGTTCTTCTTTGTTCTTGATGACATCTGGAACAAGAATTATAACCAGTTGGAATTCTTAATGCGTCCCCTTGAGTTTGGAGCACTTGGAAGCAAGATTATTGTCACAACACGCGATGAAAATGTTGCACGTATGATGGGTAACCTTGAAGCTCACCGTCTCATGCTAATGTCTGAGGAAGATAGCTGGTCGTTATTCAAAAAACATGCCTTCAAAAATGCAGGTGTTGGTGCACACTCACATCTTAAAGAAATCGGTAGACAAATTGTTCAAAAGTGCAATGGTCTTCCTTTGGCTATTAAGTCCCTTGGGGGTCTCTTATGTTCTAAATTGTTAGTGGAGGAATGGGAAAGTATATTGAACAGTGATATGTGGAGTTGCCTCTGGAAACGTTGTTTTGCACATTGTTCGATATTTTCTAAGAACTATGAGTTCAGAACATCAGAATTGGTTTACTTGTGGAAGGCTGAAGATCTCTTACAACCTAAACAAAACAAAACAGCAGAAGAAATTGGACAAGACTACTTCAATGATCTAATCTCCAGGTCATTTTTTCAGCTTTCATCAAGTCTCTATGAAACTACTTTCATCATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATCCGGAGAATTTTGTCTTAGGTGGAAGCGCACTGATTCACCCAACATTTTGAGCAAGACTCGTCATTTTTCATATATGACAAATTATGGTGATGACATTAAGATATGTGAGGATTTACAGCAAGCTAAATATTTGCGTACCTTTCTGATGAACGAACTTTTTGGCAAAGGATTAGATGAGCTATTGCCAAAGTTTCAATGTTTAAGAATGCTCAAGTTATCATGGTTCACTGAAAAGGAATTGCCTGATTCAATTAGCAACTTGAAACATCTTAAGCACTTGGACTTGTCTCACAGTTACATCGAAAAGTTACCTGATACAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAAACTGTGGCCGCCTTACTGAGCTGGCACCCTGCTTGGGAAGATTGATCAACTTGAGCCATCTGGATATTACAGAGATAAAGTTAAAAAAGATGCCACCACAAATGGGTAAGTTGAAAGAGCTCCAGATGCTACCGAAGTTTGTGCTAGACAAACACACTGCGGGGGATAATTTGCCAGAGTTAAAGAAGCTTGAAAAATTGCGTGGAAGACTTTGTATCTCAGGGCTTGTGCATAGCAGCGGTTTGGAGGCCTACATACTGAGGGACAAGAAGTTTCTTAAGGAACTGGTTTTGGATTGGAGAGGACTACGGTATTGGAGTGAAAAAGGCAATACTGTAGAAGAAAGAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAACCTGGAAAGGCTTACAATTCAAGGTTATGGAGGCAAAATGTTTCCAGGTTGGTCAGGATTTTATTCTTCCTCTGCTCTTGTTTATCTTGAATTTCATGACTGTGCGAATTGTATCTCCTTGCCACCATTGGGACAGCTACCTTCCCTCAAAGAGCTTCATATCAATGGGTTAGATGGAGTGGTGTCCATAGGTTCTGAATTCTATTATGGTGACGGCAACACTATTACTTGTGTGAATACACCATTTAGGTCCCTACGGGCTTTACAATTCTACAATATGAGTGGGTGGCAAGAATGGTCTTATGTTGGAGGTGACAATAATGAAGGTGCGGTTTTTCCTAATCTTGTTGAACTTCAAGTATTTCACTGTCCCAATCTTACCGGGAGATTAGCGCCAGACAGTCTCCCATCTCTCGAGTCTTTGGAAGTGATAGATTGCCTAGATTTGGAATGCAAAGATGGATTCCCGTCAAAGTTAAAATCACTTATCATCATCGTAGAAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

660

Amino Acids

75.64

Weight (kDa)

6.23

Isoelectric Point (pI)

47.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 18 - 109 1.1e-17 NB-ARC domain
WHD_DRP PF23559 174 - 242 3.4e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 306 - 638 6.6e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 424 - 548 1e-30 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 150
AarI CACCTGC 1 cut(s) 320
Acc36I ACCTGC 1 cut(s) 320
AccB1I GGYRCC 1 cut(s) 1120
AccI GTMKAC 1 cut(s) 367
AccII CGCG 1 cut(s) 222
AccIII TCCGGA 1 cut(s) 737
AciI CCGC 4 cut(s) 1105, 1256, 1335, 1805
AclI AACGTT 1 cut(s) 499
AclWI GGATC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 1102
AcsI RAATTY 4 cut(s) 161, 743, 1565, 1673
AcuI CTGAAG 2 cut(s) 59, 597
AfaI GTAC 2 cut(s) 874, 1063
AfiI CCNNNNNNNGG 5 cut(s) 1130, 1199, 1477, 1604, 1921
AflII CTTAAG 2 cut(s) 1007, 1373
AjnI CCWGG 3 cut(s) 650, 1476, 1519
Alw21I GWGCWC 3 cut(s) 193, 343, 1218
Alw26I GTCTC 5 cut(s) 272, 428, 683, 1029, 1883
Alw44I GTGCAC 1 cut(s) 339
AlwI GGATC 1 cut(s) 19
Ama87I CYCGRG 1 cut(s) 1889
Aor13HI TCCGGA 1 cut(s) 737
AoxI GGCC 2 cut(s) 1102, 1344
ApaLI GTGCAC 1 cut(s) 339
ApeKI GCWGC 1 cut(s) 1332
ApoI RAATTY 4 cut(s) 161, 743, 1565, 1673
AspLEI GCGC 2 cut(s) 765, 1870
AspS9I GGNCC 1 cut(s) 1725
AsuC2I CCSGG 1 cut(s) 1858
AsuHPI GGTGA 6 cut(s) 254, 765, 836, 1460, 1697, 1799
AvaI CYCGRG 1 cut(s) 1889
AvaII GGWCC 1 cut(s) 1725
BaeGI GKGCMC 1 cut(s) 343
BanI GGYRCC 1 cut(s) 1120
BanII GRGCYC 1 cut(s) 1218
BarI GAAGNNNNNNTAC 2 cut(s) 570, 602
BbsI GAAGAC 2 cut(s) 386, 1309
Bbv12I GWGCWC 3 cut(s) 193, 343, 1218
BbvI GCAGC 1 cut(s) 1344
BccI CCATC 5 cut(s) 238, 1161, 1643, 1891, 1928
BceAI ACGGC 1 cut(s) 1705
BcgI CGANNNNNNTGC 4 cut(s) 498, 532, 1219, 1253
BciT130I CCWGG 3 cut(s) 652, 1478, 1521
BciVI GTATCC 1 cut(s) 745
BclI TGATCA 1 cut(s) 1140
BcnI CCSGG 1 cut(s) 1858
BcoDI GTCTC 5 cut(s) 272, 428, 683, 1029, 1883
BfaI CTAG 3 cut(s) 65, 1241, 1916
BfmI CTRYAG 1 cut(s) 1431
BfoI RGCGCY 1 cut(s) 1871
BfrI CTTAAG 2 cut(s) 1007, 1373
BfuAI ACCTGC 1 cut(s) 320
BfuI GTATCC 1 cut(s) 745
BglII AGATCT 2 cut(s) 67, 580
BisI GCNGC 2 cut(s) 1105, 1333
BlsI GCNGC 2 cut(s) 1106, 1334
Bme1390I CCNGG 4 cut(s) 652, 1478, 1521, 1858
Bme18I GGWCC 1 cut(s) 1725
BmeT110I CYCGRG 1 cut(s) 1889
BmgT120I GGNCC 1 cut(s) 1725
BmiI GGNNCC 2 cut(s) 1122, 1727
BmrFI CCNGG 4 cut(s) 652, 1478, 1521, 1858
BmsI GCATC 2 cut(s) 1176, 1212
BpiI GAAGAC 2 cut(s) 386, 1309
BplI GAGNNNNNCTC 2 cut(s) 778, 810
BpmI CTGGAG 2 cut(s) 634, 1202
BpuEI CTTGAG 4 cut(s) 200, 932, 1168, 1472
BpuMI CCSGG 1 cut(s) 1858
BsaAI YACGTR 1 cut(s) 239
BsaI GGTCTC 1 cut(s) 428
BsaJI CCNNGG 1 cut(s) 415
BsaWI WCCGGW 1 cut(s) 737
Bsc4I CCNNNNNNNGG 5 cut(s) 1130, 1199, 1477, 1604, 1921
Bse1I ACTGG 2 cut(s) 154, 1386
Bse3DI GCAATG 1 cut(s) 394
BseAI TCCGGA 1 cut(s) 737
BseBI CCWGG 3 cut(s) 652, 1478, 1521
BseDI CCNNGG 1 cut(s) 415
BseLI CCNNNNNNNGG 5 cut(s) 1130, 1199, 1477, 1604, 1921
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 4 cut(s) 273, 1104, 1329, 1346
BseNI ACTGG 2 cut(s) 154, 1386
BseSI GKGCMC 1 cut(s) 343
BseXI GCAGC 1 cut(s) 1344
Bsh1236I CGCG 1 cut(s) 222
BshFI GGCC 2 cut(s) 1104, 1346
BshNI GGYRCC 1 cut(s) 1120
BsiHKAI GWGCWC 3 cut(s) 193, 343, 1218
BsiHKCI CYCGRG 1 cut(s) 1889
BsiSI CCGG 2 cut(s) 738, 1857
BslFI GGGAC 7 cut(s) 18, 159, 397, 1373, 1620, 1711, 1830
BslI CCNNNNNNNGG 5 cut(s) 1130, 1199, 1477, 1604, 1921
BsmAI GTCTC 5 cut(s) 272, 428, 683, 1029, 1883
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 7 cut(s) 18, 159, 397, 1373, 1620, 1711, 1830
BsmI GAATGC 2 cut(s) 948, 1931
BsnI GGCC 2 cut(s) 1104, 1346
Bso31I GGTCTC 1 cut(s) 428
BsoBI CYCGRG 1 cut(s) 1889
Bsp1286I GDGCHC 3 cut(s) 193, 343, 1218
Bsp13I TCCGGA 1 cut(s) 737
Bsp143I GATC 5 cut(s) 11, 67, 580, 640, 1140
BspACI CCGC 4 cut(s) 1105, 1256, 1335, 1805
BspANI GGCC 2 cut(s) 1104, 1346
BspCNI CTCAG 4 cut(s) 274, 1105, 1328, 1347
BspEI TCCGGA 1 cut(s) 737
BspFNI CGCG 1 cut(s) 222
BspHI TCATGA 1 cut(s) 1570
BspLI GGNNCC 2 cut(s) 1122, 1727
BspMI ACCTGC 1 cut(s) 320
BspPI GGATC 1 cut(s) 19
BspT107I GGYRCC 1 cut(s) 1120
BspTI CTTAAG 2 cut(s) 1007, 1373
BspTNI GGTCTC 1 cut(s) 428
BsrDI GCAATG 1 cut(s) 394
BsrI ACTGG 2 cut(s) 154, 1386
BssECI CCNNGG 1 cut(s) 415
BssMI GATC 5 cut(s) 11, 67, 580, 640, 1140
BssT1I CCWWGG 1 cut(s) 415
Bst2UI CCWGG 3 cut(s) 652, 1478, 1521
Bst4CI ACNGT 9 cut(s) 266, 473, 1031, 1100, 1407, 1432, 1577, 1844, 1877
BstAFI CTTAAG 2 cut(s) 1007, 1373
BstBAI YACGTR 1 cut(s) 239
BstC8I GCNNGC 3 cut(s) 727, 858, 1119
BstDEI CTNAG 6 cut(s) 282, 528, 752, 1113, 1315, 1355
BstEII GGTNACC 1 cut(s) 248
BstFNI CGCG 1 cut(s) 222
BstH2I RGCGCY 1 cut(s) 1871
BstHHI GCGC 2 cut(s) 765, 1870
BstKTI GATC 5 cut(s) 14, 70, 583, 643, 1143
BstMAI GTCTC 5 cut(s) 272, 428, 683, 1029, 1883
BstMBI GATC 5 cut(s) 11, 67, 580, 640, 1140
BstMWI GCNNNNNNNGC 2 cut(s) 1222, 1456
BstNI CCWGG 3 cut(s) 652, 1478, 1521
BstNSI RCATGY 1 cut(s) 317
BstPI GGTNACC 1 cut(s) 248
BstSCI CCNGG 4 cut(s) 650, 1476, 1519, 1856
BstSFI CTRYAG 1 cut(s) 1431
BstSLI GKGCMC 1 cut(s) 343
BstUI CGCG 1 cut(s) 222
BstV1I GCAGC 1 cut(s) 1344
BstV2I GAAGAC 2 cut(s) 386, 1309
BstX2I RGATCY 3 cut(s) 11, 67, 580
BstYI RGATCY 3 cut(s) 11, 67, 580
BsuI GTATCC 1 cut(s) 745
BsuRI GGCC 2 cut(s) 1104, 1346
BtgZI GCGATG 1 cut(s) 237
BtsI GCAGTG 1 cut(s) 1251
BtsIMutI CAGTG 5 cut(s) 478, 765, 963, 1251, 1840
BveI ACCTGC 1 cut(s) 320
Cac8I GCNNGC 3 cut(s) 727, 858, 1119
CciI TCATGA 1 cut(s) 1570
CfoI GCGC 2 cut(s) 765, 1870
Cfr13I GGNCC 1 cut(s) 1725
CseI GACGC 1 cut(s) 161
Csp6I GTAC 2 cut(s) 873, 1062
CspCI CAANNNNNGTGG 2 cut(s) 1738, 1773
CviAII CATG 6 cut(s) 271, 314, 700, 704, 957, 1571
CviQI GTAC 2 cut(s) 873, 1062
DdeI CTNAG 6 cut(s) 282, 528, 752, 1113, 1315, 1355
DpnI GATC 5 cut(s) 13, 69, 582, 642, 1142
DpnII GATC 5 cut(s) 11, 67, 580, 640, 1140
EaeI YGGCCR 1 cut(s) 1102
Ecl136II GAGCTC 1 cut(s) 1216
Eco130I CCWWGG 1 cut(s) 415
Eco147I AGGCCT 1 cut(s) 1346
Eco24I GRGCYC 1 cut(s) 1218
Eco31I GGTCTC 1 cut(s) 428
Eco47I GGWCC 1 cut(s) 1725
Eco53kI GAGCTC 1 cut(s) 1216
Eco57I CTGAAG 2 cut(s) 59, 597
Eco88I CYCGRG 1 cut(s) 1889
Eco91I GGTNACC 1 cut(s) 248
EcoICRI GAGCTC 1 cut(s) 1216
EcoO109I RGGNCCY 1 cut(s) 1725
EcoO65I GGTNACC 1 cut(s) 248
EcoRI GAATTC 2 cut(s) 161, 1673
EcoRII CCWGG 3 cut(s) 650, 1476, 1519
EcoT14I CCWWGG 1 cut(s) 415
EcoT22I ATGCAT 1 cut(s) 705
EcoT38I GRGCYC 1 cut(s) 1218
ErhI CCWWGG 1 cut(s) 415
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 6 cut(s) 274, 317, 703, 707, 960, 1574
FaqI GGGAC 7 cut(s) 18, 159, 397, 1373, 1620, 1711, 1830
FatI CATG 6 cut(s) 270, 313, 699, 703, 956, 1570
FauI CCCGC 1 cut(s) 1249
FbaI TGATCA 1 cut(s) 1140
FblI GTMKAC 1 cut(s) 367
Fnu4HI GCNGC 2 cut(s) 1105, 1333
FriOI GRGCYC 1 cut(s) 1218
Fsp4HI GCNGC 2 cut(s) 1105, 1333
FspBI CTAG 3 cut(s) 65, 1241, 1916
GlaI GCGC 2 cut(s) 764, 1869
GluI GCNGC 2 cut(s) 1105, 1333
GsuI CTGGAG 2 cut(s) 634, 1202
HaeII RGCGCY 1 cut(s) 1871
HaeIII GGCC 2 cut(s) 1104, 1346
HapII CCGG 2 cut(s) 738, 1857
HgaI GACGC 1 cut(s) 161
HhaI GCGC 2 cut(s) 765, 1870
Hin1II CATG 6 cut(s) 274, 317, 703, 707, 960, 1574
Hin6I GCGC 2 cut(s) 763, 1868
HinP1I GCGC 2 cut(s) 763, 1868
HindIII AAGCTT 3 cut(s) 45, 727, 1283
HinfI GANTC 6 cut(s) 31, 770, 793, 983, 1892, 1938
HpaII CCGG 2 cut(s) 738, 1857
HphI GGTGA 6 cut(s) 254, 765, 836, 1460, 1697, 1799
Hpy166II GTNNAC 4 cut(s) 341, 368, 562, 963
Hpy188I TCNGA 6 cut(s) 43, 283, 545, 553, 882, 1672
Hpy8I GTNNAC 4 cut(s) 341, 368, 562, 963
HpyAV CCTTC 5 cut(s) 102, 328, 565, 1626, 1793
HpyCH4III ACNGT 9 cut(s) 266, 473, 1031, 1100, 1407, 1432, 1577, 1844, 1877
HpyCH4IV ACGT 2 cut(s) 238, 499
HpyF10VI GCNNNNNNNGC 2 cut(s) 1222, 1456
HpyF3I CTNAG 6 cut(s) 282, 528, 752, 1113, 1315, 1355
HpySE526I ACGT 2 cut(s) 238, 499
Hsp92II CATG 6 cut(s) 274, 317, 703, 707, 960, 1574
HspAI GCGC 2 cut(s) 763, 1868
Kpn2I TCCGGA 1 cut(s) 737
Ksp22I TGATCA 1 cut(s) 1140
Kzo9I GATC 5 cut(s) 11, 67, 580, 640, 1140
LmnI GCTCC 3 cut(s) 188, 1221, 1464
Lsp1109I GCAGC 1 cut(s) 1344
LweI GCATC 2 cut(s) 1176, 1212
MaeI CTAG 3 cut(s) 65, 1241, 1916
MaeII ACGT 2 cut(s) 238, 499
MaeIII GTNAC 6 cut(s) 211, 248, 1031, 1044, 1685, 1787
MalI GATC 5 cut(s) 13, 69, 582, 642, 1142
MboI GATC 5 cut(s) 11, 67, 580, 640, 1140
MflI RGATCY 3 cut(s) 11, 67, 580
MhlI GDGCHC 3 cut(s) 193, 343, 1218
MlyI GAGTC 3 cut(s) 40, 787, 1901
MmeI TCCRAC 3 cut(s) 138, 1486, 1762
Mph1103I ATGCAT 1 cut(s) 705
MroI TCCGGA 1 cut(s) 737
MslI CAYNNNNRTG 4 cut(s) 26, 275, 1575, 1638
MspA1I CMGCKG 1 cut(s) 1335
MspCI CTTAAG 2 cut(s) 1007, 1373
MspI CCGG 2 cut(s) 738, 1857
MspR9I CCNGG 4 cut(s) 652, 1478, 1521, 1858
Mva1269I GAATGC 2 cut(s) 948, 1931
MvaI CCWGG 3 cut(s) 652, 1478, 1521
MvnI CGCG 1 cut(s) 222
MwoI GCNNNNNNNGC 2 cut(s) 1222, 1456
NciI CCSGG 1 cut(s) 1858
NdeII GATC 5 cut(s) 11, 67, 580, 640, 1140
NlaIII CATG 6 cut(s) 274, 317, 703, 707, 960, 1574
NlaIV GGNNCC 2 cut(s) 1122, 1727
NmuCI GTSAC 3 cut(s) 211, 1685, 1787
NsiI ATGCAT 1 cut(s) 705
NspI RCATGY 1 cut(s) 317
PaeR7I CTCGAG 1 cut(s) 1889
PagI TCATGA 1 cut(s) 1570
PaqCI CACCTGC 1 cut(s) 320
PceI AGGCCT 1 cut(s) 1346
PctI GAATGC 2 cut(s) 948, 1931
PfeI GAWTC 3 cut(s) 770, 983, 1938
PkrI GCNGC 2 cut(s) 1106, 1334
PleI GAGTC 3 cut(s) 39, 787, 1900
PpsI GAGTC 3 cut(s) 39, 787, 1900
Ppu21I YACGTR 1 cut(s) 239
PpuMI RGGWCCY 1 cut(s) 1725
PsiI TTATAA 1 cut(s) 150
Psp124BI GAGCTC 1 cut(s) 1218
Psp1406I AACGTT 1 cut(s) 499
Psp5II RGGWCCY 1 cut(s) 1725
Psp6I CCWGG 3 cut(s) 650, 1476, 1519
PspEI GGTNACC 1 cut(s) 248
PspGI CCWGG 3 cut(s) 650, 1476, 1519
PspN4I GGNNCC 2 cut(s) 1122, 1727
PspPI GGNCC 1 cut(s) 1725
PspPPI RGGWCCY 1 cut(s) 1725
PsuI RGATCY 3 cut(s) 11, 67, 580
RsaI GTAC 2 cut(s) 874, 1063
RsaNI GTAC 2 cut(s) 873, 1062
RseI CAYNNNNRTG 4 cut(s) 26, 275, 1575, 1638
SacI GAGCTC 1 cut(s) 1218
SatI GCNGC 2 cut(s) 1105, 1333
Sau3AI GATC 5 cut(s) 11, 67, 580, 640, 1140
Sau96I GGNCC 1 cut(s) 1725
SchI GAGTC 3 cut(s) 40, 787, 1901
ScrFI CCNGG 4 cut(s) 652, 1478, 1521, 1858
SduI GDGCHC 3 cut(s) 193, 343, 1218
SfaNI GCATC 2 cut(s) 1176, 1212
SfcI CTRYAG 1 cut(s) 1431
Sfr274I CTCGAG 1 cut(s) 1889
SinI GGWCC 1 cut(s) 1725
SlaI CTCGAG 1 cut(s) 1889
SmiMI CAYNNNNRTG 4 cut(s) 26, 275, 1575, 1638
SmlI CTYRAG 7 cut(s) 179, 947, 1007, 1147, 1373, 1451, 1889
SmoI CTYRAG 7 cut(s) 179, 947, 1007, 1147, 1373, 1451, 1889
SseBI AGGCCT 1 cut(s) 1346
SsiI CCGC 4 cut(s) 1105, 1256, 1335, 1805
SspI AATATT 1 cut(s) 866
SspMI CTAG 3 cut(s) 65, 1241, 1916
SstI GAGCTC 1 cut(s) 1218
StuI AGGCCT 1 cut(s) 1346
StyD4I CCNGG 4 cut(s) 650, 1476, 1519, 1856
StyI CCWWGG 1 cut(s) 415
TaaI ACNGT 9 cut(s) 266, 473, 1031, 1100, 1407, 1432, 1577, 1844, 1877
TaiI ACGT 2 cut(s) 241, 502
TaqI TCGA 3 cut(s) 518, 1038, 1890
TatI WGTACW 1 cut(s) 1061
TauI GCSGC 1 cut(s) 1107
TfiI GAWTC 3 cut(s) 770, 983, 1938
TscAI CASTG 5 cut(s) 478, 772, 970, 1258, 1847
TseFI GTSAC 3 cut(s) 211, 1685, 1787
TseI GCWGC 1 cut(s) 1332
Tsp45I GTSAC 3 cut(s) 211, 1685, 1787
TspDTI ATGAA 9 cut(s) 240, 660, 685, 699, 795, 899, 1559, 1622, 1812
TspRI CASTG 5 cut(s) 478, 772, 970, 1258, 1847
Vha464I CTTAAG 2 cut(s) 1007, 1373
VneI GTGCAC 1 cut(s) 339
VpaK11BI GGWCC 1 cut(s) 1725
XapI RAATTY 4 cut(s) 161, 743, 1565, 1673
XceI RCATGY 1 cut(s) 317
XhoI CTCGAG 1 cut(s) 1889
XmiI GTMKAC 1 cut(s) 367
XspI CTAG 3 cut(s) 65, 1241, 1916
Zsp2I ATGCAT 1 cut(s) 705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.