Rw0G013000

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00581
Physical Location & Seq
Forward (+)
2434 .. 5772
3339 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013000.1

Sequence Viewer

Length: 3258 bp
ATGGCCGCGGAACTAGCGGGTGGATCTCTTCTATCCTCTTTTCTCTCTGTGTTGTTGGATGGAATTGCTTGTGTTGAGTTGGTTGACTTTATTCGGAGGCACAGAGAAACACCTGGACTGCTCAATAAGTTGAAGATGAAGTTGCTGGCAGTCAATGAAGTGGTCGATGATGCTGAGGAGAGGCAGATCAGAGATTCAGACCTGCTCGATGAGATCCGGACAGAGGATCTGCGACGCAGGCCGGAAGGTGGAGAGAGCAGCACAACTTCTTTCTTCAAGAGCTTTTCCTCAGTTCTTAATGAGTTTGAAAGAAGTATGGTTCCAAGGCTTTTGGATATTGTTGAAAGATTAGATCTTATTGTGGACCAAATGGCGGTACTTGATTTGAAAATCCGTGGCGTTGAAGATAGACCACGAGCAAGACTATCCACAGTTCCTCCGGTAGAAGAGTCTGGCATCTATGGAAGGGATGAGGACAAGGAGAGCATCATGAGATTGTTGCTGTCAGGGGATGCAACGTATGATAAGATTGGTGTCATTCCTATTGTGGGCACGGGTGGGGTCGGTAAAACAACCCTTGCTCAACTTGTGTACAACGATGCCAGAGTGGAGGAAGAGTTTGATCTCCGAGTTTGGGTTTGTGTTTCGGATGATTTTGATGTTTTTATAACAATACAGTCGATGTATGAGTGGATTTGTTCTCCAACTTGTGTTATCACTAATTTGGATCTACTTCAATCTAAATTGAAAGGTACTTTGGCTAGAAAGAAGTTTCTCATTGTTCTTGATGATGTTTGGAATAGGAATTATATTCGCTGGGAGGTCCTGAGGCGCCCGTTCCAATTTGGAGCACAAGGAAGTAAGATCATTGTCACAACACGGGTTCTTGATGTTGCACATATGATGGGTACTCTTCCACCTTACTTTCTAATGCCATTATCTGAGCAAGATTGCTGGAACTTGTTTGCTGAGCATGCCTTTGAAAATGCAAAAGTTGGTGCACATCCACATCTTGAAGTAATCGGAAGAAAGATTGCGAGCAAGTGTAGCGGTCTTCCCTTGGCTGCAAAATCACTTGGAGGTCTTTTACGCTCTGAACTGATTCCGAAACAATGGGAGAGGATATTGAACAGTGACATATGGGAGTCATCACCTGAGGAGAGCGGCATTCTGCCTGCTCTATGGTTGAGCTATTGTTACCAGTTTACAAAATCAGAATTGATATCGTTATGGATGGCTGAAGATCTCTTACCACCTAGTAAGAGCAAAACGATGGAACAAGTTGGAGATGACTACTTCAACATTCTAATCTCAAGGTCATTTTTTCAACATTCAGGTGCTTATAATGAATCAGTGTTTACCATGCATGATCTCATTCGTGATTTGGCAGAGTTTATATCGGGAGAGTTTTGTGTTAGGCTTGAGGAGGGTGATGTTTCACTCACAACTGTAAGAAAGACTCGTCATTTTTCCTACATGAAAAGTCACGTTACAGAAGAGAAACTTGAGGGTTTATATAATGCAAGATATCTGCGCACCTTTATATCAATCCCACAGTATTCTGGTACCCCAGACTTTCACATGTCGAGTGAGGTACTATGTGATAGCAAGGTACTATGTGATCTATTGCCAACATTACAATGCTTGAGAGTGCTCGATTTATCAGGATATGATATCATAGAGTTGCCTGATTCAGTAAGCAGCTTGAAACATCTGAGACAGCTGGTGTTGTCTGGCGGTTCAATTAAGAAGTTGCCCGACTCAATTTGTACTTTATATAATTTACAAACATTATTGTTGAGTTATTGTGAAGAACTTGTTGAGTTACCAACTAATTTGGGGAGCCTGATCAACTTGCGCCATCTTGATATCAAAGGGACAATGTTAAAGAAGATGCCCCCGTCTATGGGTAAGCTGAAAAATCTGCAATTATTAACTGATTTTGTTTTGGACAAACACAGTGGGGATAGCATTGCAGAGTTAAGTGAGCTTCAGCATCTGCACGGAAGCCTTTTGATCTCAGGACTTGATCACAATGTAGATGATGTGGCTGCTTTGAAGGCCAATTTGAGAGGCAAGGAATATCTCAATGAACTGGGTTTGAAATGGGGGGATGTTACTGAGGACTCCCAAAAAGATAGCAAAGTTCTCCAGCAGCTTGAACCTCATCCTATGCTAAGAGAACTTGTTATTATATCTTATGGGGGTAGCGGATTTCCAGGTTGGTTAGGAGATCCTCATTTCTCTAATCTATCTTCTATTGAACTTGTAGATTGTAAGCATTGTTTGTTCTTCCCCCCACTGGGGCGACTACCATCCCTCACAAAGCTTTCTATTAAGGGGTTTGAGGAACTGCTTTCGATTGGCTCTGAGTTTTGTGGCCCATTTAGATCTCTCAAAGAGTTGAATTTCATCTGTATGTTCAAATGGCAGGAATGGTGTTATGTTGATGGTAGTCATGAAGAAGGCGGAGTCTTTCCTAATCTTTGTAAGCTGACTTTGGACAACTGTCCAGAGTTAACTAACATATTACCATTAGACAGCTTCCCAAAGCTTGAAGATGTGGGATTGTCTAGTCTGAACTCCTTTGCTGGCTCACTTTCACAAGAATCTCAATGTCCCAAATTCCTGTCCCTGCGTAAACTGAAAATAATTGGATGCCCTATGTTTATATGTTTATCAGATGGTGGGATGGATGCGCCCAATTTGAAGGAGATGCATATCAGTGGTTCTTGGGAATTTCGGTCATTGCCTAAACAAATGCACACCCTTCTCCCTTCTCTTGAGCATCTGGGAATAAAATTCTGTCCAAAATTCAAATCATTTCCAGAAGGGGGATTGCCGCCAGCATTAAAATCTCTTGAATTTGATTGTTACAAAGAACTCTTTGAAAACCACCAGCATTGGGGTCTACAAACAGTCAGCTCTCTTAGAAATCTGAGAATCTCGTTTCTGGATGCTGAAGAAGTAAATTCATTTCCAGAGAGACTGCTTCCTACCTCTCTCACTTGTCTCTCCATCTCCAACCTTCCAAATGTTACGACCTTGGAGGAGTTGAGTTGCTTCAACTCTCTTCAGTCGTTATTCATTGCTAGGTTGCCCAAACTTCAGAGCTTGCCAGAAGAAGCTTCTTCTCTTTCTCGGTTGGTGATCTGGGACTGTGCTTTGCTCCAAGAACGAGTCCAGAAAGAGAGAGGGGAAGATTGGCCCAAGATTGCTCACATCCCTTGCGTAGAGATCAATGGAGAGGAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1085

Amino Acids

122.33

Weight (kDa)

5.24

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 175 - 329 3.4e-31 NB-ARC domain
WHD_DRP PF23559 400 - 463 2.9e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 541 - 862 7.2e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 658 - 781 6.3e-34 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 668, 1344
Acc16I TGCGCA 1 cut(s) 1535
Acc36I ACCTGC 1 cut(s) 210
Acc65I GGTACC 1 cut(s) 1565
AccB1I GGYRCC 2 cut(s) 831, 1565
AccBSI CCGCTC 1 cut(s) 1164
AccI GTMKAC 1 cut(s) 2911
AccII CGCG 1 cut(s) 8
AccIII TCCGGA 1 cut(s) 216
AclWI GGATC 5 cut(s) 31, 208, 234, 735, 2228
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 7 cut(s) 2407, 2624, 2738, 2801, 2813, 2864, 2971
AcuI CTGAAG 5 cut(s) 1260, 1976, 2982, 3059, 3092
AcyI GRCGYC 1 cut(s) 832
AfaI GTAC 8 cut(s) 378, 593, 754, 910, 1567, 1596, 1614, 1771
AflIII ACRYGT 1 cut(s) 1581
AjnI CCWGG 2 cut(s) 112, 2218
AjuI GAANNNNNNNTTGG 2 cut(s) 740, 772
Alw21I GWGCWC 3 cut(s) 853, 1003, 1656
Alw26I GTCTC 3 cut(s) 1711, 2980, 3017
Alw44I GTGCAC 1 cut(s) 999
AlwI GGATC 5 cut(s) 31, 208, 234, 735, 2228
AlwNI CAGNNNCTG 1 cut(s) 1999
Aor13HI TCCGGA 1 cut(s) 216
AoxI GGCC 5 cut(s) 3, 239, 2061, 2380, 3206
ApaLI GTGCAC 1 cut(s) 999
ApeKI GCWGC 5 cut(s) 258, 1064, 1701, 2051, 2155
ApoI RAATTY 7 cut(s) 2407, 2624, 2738, 2801, 2813, 2864, 2971
Asp700I GAANNNNTTC 1 cut(s) 1101
Asp718I GGTACC 1 cut(s) 1565
AspLEI GCGC 4 cut(s) 834, 1536, 1860, 2701
AspS9I GGNCC 4 cut(s) 364, 823, 2381, 3207
AsuHPI GGTGA 3 cut(s) 1143, 1442, 3160
AvaII GGWCC 2 cut(s) 364, 823
AxyI CCTNAGG 2 cut(s) 827, 1155
BaeGI GKGCMC 2 cut(s) 554, 1003
BanI GGYRCC 2 cut(s) 831, 1565
BarI GAAGNNNNNNTAC 2 cut(s) 1233, 1265
BauI CACGAG 1 cut(s) 414
BbsI GAAGAC 1 cut(s) 1046
Bbv12I GWGCWC 3 cut(s) 853, 1003, 1656
BbvCI CCTCAGC 1 cut(s) 174
BbvI GCAGC 5 cut(s) 270, 1051, 1713, 2038, 2167
BciT130I CCWGG 2 cut(s) 114, 2220
BclI TGATCA 2 cut(s) 1848, 2029
BcoDI GTCTC 3 cut(s) 1711, 2980, 3017
BfaI CTAG 5 cut(s) 14, 762, 1257, 2574, 3093
BfoI RGCGCY 1 cut(s) 835
BfuAI ACCTGC 1 cut(s) 210
BglII AGATCT 3 cut(s) 352, 1243, 2390
BisI GCNGC 8 cut(s) 6, 259, 1065, 1165, 1702, 2052, 2156, 2843
BlpI GCTNAGC 1 cut(s) 969
BlsI GCNGC 8 cut(s) 7, 260, 1066, 1166, 1703, 2053, 2157, 2844
Bme1390I CCNGG 2 cut(s) 114, 2220
Bme18I GGWCC 2 cut(s) 364, 823
BmgT120I GGNCC 4 cut(s) 364, 823, 2381, 3207
BmiI GGNNCC 4 cut(s) 321, 833, 1567, 1844
BmrFI CCNGG 2 cut(s) 114, 2220
BmrI ACTGGG 2 cut(s) 2105, 2312
BmuI ACTGGG 2 cut(s) 2105, 2312
BoxI GACNNNNGTC 1 cut(s) 2508
BpiI GAAGAC 1 cut(s) 1046
BpmI CTGGAG 1 cut(s) 2135
Bpu10I CCTNAGC 1 cut(s) 174
Bpu1102I GCTNAGC 1 cut(s) 969
BpuEI CTTGAG 5 cut(s) 1297, 1442, 1526, 1666, 2804
BsaBI GATNNNNATC 1 cut(s) 2720
BsaHI GRCGYC 1 cut(s) 832
BsaJI CCNNGG 5 cut(s) 6, 323, 394, 1059, 3045
BsaWI WCCGGW 2 cut(s) 216, 439
BsaXI ACNNNNNCTCC 4 cut(s) 421, 451, 602, 632
Bse1I ACTGG 3 cut(s) 1201, 2100, 2307
Bse21I CCTNAGG 2 cut(s) 827, 1155
Bse3DI GCAATG 3 cut(s) 1971, 2747, 3087
Bse8I GATNNNNATC 1 cut(s) 2720
BseAI TCCGGA 1 cut(s) 216
BseBI CCWGG 2 cut(s) 114, 2220
BseDI CCNNGG 5 cut(s) 6, 323, 394, 1059, 3045
BseJI GATNNNNATC 1 cut(s) 2720
BseMI GCAATG 3 cut(s) 1971, 2747, 3087
BseNI ACTGG 3 cut(s) 1201, 2100, 2307
BseRI GAGGAG 4 cut(s) 191, 1172, 1439, 3065
BseSI GKGCMC 2 cut(s) 554, 1003
BseXI GCAGC 5 cut(s) 270, 1051, 1713, 2038, 2167
BseYI CCCAGC 1 cut(s) 816
BsgI GTGCAG 1 cut(s) 1985
Bsh1236I CGCG 1 cut(s) 8
BshFI GGCC 5 cut(s) 5, 241, 2063, 2382, 3208
BshNI GGYRCC 2 cut(s) 831, 1565
BsiHKAI GWGCWC 3 cut(s) 853, 1003, 1656
BsiSI CCGG 3 cut(s) 217, 242, 440
BslFI GGGAC 4 cut(s) 1891, 2604, 2617, 3170
BsmAI GTCTC 3 cut(s) 1711, 2980, 3017
BsmFI GGGAC 4 cut(s) 1891, 2604, 2617, 3170
BsmI GAATGC 1 cut(s) 1167
BsnI GGCC 5 cut(s) 5, 241, 2063, 2382, 3208
Bsp1286I GDGCHC 4 cut(s) 554, 853, 1003, 1656
Bsp13I TCCGGA 1 cut(s) 216
Bsp1407I TGTACA 1 cut(s) 591
Bsp1720I GCTNAGC 1 cut(s) 969
BspANI GGCC 5 cut(s) 5, 241, 2063, 2382, 3208
BspEI TCCGGA 1 cut(s) 216
BspFNI CGCG 1 cut(s) 8
BspHI TCATGA 2 cut(s) 489, 2458
BspLI GGNNCC 4 cut(s) 321, 833, 1567, 1844
BspMI ACCTGC 1 cut(s) 210
BspPI GGATC 5 cut(s) 31, 208, 234, 735, 2228
BspT107I GGYRCC 2 cut(s) 831, 1565
BsrBI CCGCTC 1 cut(s) 1164
BsrDI GCAATG 3 cut(s) 1971, 2747, 3087
BsrGI TGTACA 1 cut(s) 591
BsrI ACTGG 3 cut(s) 1201, 2100, 2307
BssECI CCNNGG 5 cut(s) 6, 323, 394, 1059, 3045
BssNI GRCGYC 1 cut(s) 832
BssSI CACGAG 1 cut(s) 414
BssT1I CCWWGG 3 cut(s) 323, 1059, 3045
Bst2BI CACGAG 1 cut(s) 414
Bst2UI CCWGG 2 cut(s) 114, 2220
Bst4CI ACNGT 9 cut(s) 433, 678, 1133, 1450, 1557, 1961, 2510, 2920, 3161
Bst6I CTCTTC 6 cut(s) 33, 441, 609, 918, 1491, 3078
BstACI GRCGYC 1 cut(s) 832
BstAUI TGTACA 1 cut(s) 591
BstC8I GCNNGC 8 cut(s) 147, 239, 975, 1039, 1176, 2593, 2847, 3116
BstDSI CCRYGG 2 cut(s) 6, 394
BstFNI CGCG 1 cut(s) 8
BstH2I RGCGCY 1 cut(s) 835
BstHHI GCGC 4 cut(s) 834, 1536, 1860, 2701
BstMAI GTCTC 3 cut(s) 1711, 2980, 3017
BstMWI GCNNNNNNNGC 5 cut(s) 14, 238, 974, 1047, 2060
BstNI CCWGG 2 cut(s) 114, 2220
BstNSI RCATGY 2 cut(s) 977, 1585
BstPAI GACNNNNGTC 1 cut(s) 2508
BstSCI CCNGG 2 cut(s) 112, 2218
BstSLI GKGCMC 2 cut(s) 554, 1003
BstUI CGCG 1 cut(s) 8
BstV1I GCAGC 5 cut(s) 270, 1051, 1713, 2038, 2167
BstV2I GAAGAC 1 cut(s) 1046
BstX2I RGATCY 8 cut(s) 23, 213, 226, 352, 727, 1243, 2233, 2390
BstYI RGATCY 8 cut(s) 23, 213, 226, 352, 727, 1243, 2233, 2390
Bsu36I CCTNAGG 2 cut(s) 827, 1155
BsuRI GGCC 5 cut(s) 5, 241, 2063, 2382, 3208
BtgI CCRYGG 2 cut(s) 6, 394
BtsIMutI CAGTG 5 cut(s) 1138, 1359, 1966, 2300, 2731
BveI ACCTGC 1 cut(s) 210
Cac8I GCNNGC 8 cut(s) 147, 239, 975, 1039, 1176, 2593, 2847, 3116
CaiI CAGNNNCTG 1 cut(s) 1999
CciI TCATGA 2 cut(s) 489, 2458
CfoI GCGC 4 cut(s) 834, 1536, 1860, 2701
Cfr13I GGNCC 4 cut(s) 364, 823, 2381, 3207
Cfr42I CCGCGG 1 cut(s) 9
CseI GACGC 1 cut(s) 243
Csp6I GTAC 8 cut(s) 377, 592, 753, 909, 1566, 1595, 1613, 1770
CspCI CAANNNNNGTGG 4 cut(s) 1942, 1977, 2885, 2920
CviAII CATG 7 cut(s) 490, 974, 1363, 1367, 1477, 1582, 2459
CviQI GTAC 8 cut(s) 377, 592, 753, 909, 1566, 1595, 1613, 1770
DinI GGCGCC 1 cut(s) 833
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 6 cut(s) 33, 441, 609, 918, 1491, 3078
EarI CTCTTC 6 cut(s) 33, 441, 609, 918, 1491, 3078
EciI GGCGGA 1 cut(s) 2484
Eco130I CCWWGG 3 cut(s) 323, 1059, 3045
Eco32I GATATC 4 cut(s) 1224, 1529, 1675, 1870
Eco47I GGWCC 2 cut(s) 364, 823
Eco57I CTGAAG 5 cut(s) 1260, 1976, 2982, 3059, 3092
Eco81I CCTNAGG 2 cut(s) 827, 1155
EcoO109I RGGNCCY 1 cut(s) 823
EcoRII CCWGG 2 cut(s) 112, 2218
EcoRV GATATC 4 cut(s) 1224, 1529, 1675, 1870
EcoT14I CCWWGG 3 cut(s) 323, 1059, 3045
EcoT22I ATGCAT 2 cut(s) 1368, 2721
EgeI GGCGCC 1 cut(s) 833
EheI GGCGCC 1 cut(s) 833
ErhI CCWWGG 3 cut(s) 323, 1059, 3045
FaeI CATG 7 cut(s) 493, 977, 1366, 1370, 1480, 1585, 2462
FalI AAGNNNNNCTT 2 cut(s) 1488, 1520
FaqI GGGAC 4 cut(s) 1891, 2604, 2617, 3170
FatI CATG 7 cut(s) 489, 973, 1362, 1366, 1476, 1581, 2458
FauI CCCGC 1 cut(s) 10
FauNDI CATATG 2 cut(s) 900, 1139
FbaI TGATCA 2 cut(s) 1848, 2029
FblI GTMKAC 1 cut(s) 2911
Fnu4HI GCNGC 8 cut(s) 6, 259, 1065, 1165, 1702, 2052, 2156, 2843
Fsp4HI GCNGC 8 cut(s) 6, 259, 1065, 1165, 1702, 2052, 2156, 2843
FspBI CTAG 5 cut(s) 14, 762, 1257, 2574, 3093
FspI TGCGCA 1 cut(s) 1535
GlaI GCGC 4 cut(s) 833, 1535, 1859, 2700
GluI GCNGC 8 cut(s) 6, 259, 1065, 1165, 1702, 2052, 2156, 2843
GsaI CCCAGC 1 cut(s) 820
GsuI CTGGAG 1 cut(s) 2135
HaeII RGCGCY 1 cut(s) 835
HaeIII GGCC 5 cut(s) 5, 241, 2063, 2382, 3208
HapII CCGG 3 cut(s) 217, 242, 440
HgaI GACGC 1 cut(s) 243
HhaI GCGC 4 cut(s) 834, 1536, 1860, 2701
Hin1I GRCGYC 1 cut(s) 832
Hin1II CATG 7 cut(s) 493, 977, 1366, 1370, 1480, 1585, 2462
Hin6I GCGC 4 cut(s) 832, 1534, 1858, 2699
HinP1I GCGC 4 cut(s) 832, 1534, 1858, 2699
HincII GTYRAC 2 cut(s) 85, 2520
HindII GTYRAC 2 cut(s) 85, 2520
HindIII AAGCTT 3 cut(s) 2327, 2552, 3126
HpaI GTTAAC 1 cut(s) 2520
HpaII CCGG 3 cut(s) 217, 242, 440
HphI GGTGA 3 cut(s) 1143, 1442, 3160
Hpy166II GTNNAC 9 cut(s) 85, 364, 592, 1001, 1206, 1359, 2520, 2642, 2912
Hpy8I GTNNAC 9 cut(s) 85, 364, 592, 1001, 1206, 1359, 2520, 2642, 2912
Hpy99I CGWCG 1 cut(s) 237
HpyAV CCTTC 9 cut(s) 239, 459, 2053, 2459, 2704, 2780, 2787, 2825, 3038
HpyCH4III ACNGT 9 cut(s) 433, 678, 1133, 1450, 1557, 1961, 2510, 2920, 3161
HpyCH4IV ACGT 2 cut(s) 518, 1488
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 238, 974, 1047, 2060
HpySE526I ACGT 2 cut(s) 518, 1488
Hsp92I GRCGYC 1 cut(s) 832
Hsp92II CATG 7 cut(s) 493, 977, 1366, 1370, 1480, 1585, 2462
HspAI GCGC 4 cut(s) 832, 1534, 1858, 2699
KasI GGCGCC 1 cut(s) 831
Kpn2I TCCGGA 1 cut(s) 216
KpnI GGTACC 1 cut(s) 1569
Ksp22I TGATCA 2 cut(s) 1848, 2029
KspAI GTTAAC 1 cut(s) 2520
KspI CCGCGG 1 cut(s) 9
LmnI GCTCC 3 cut(s) 848, 1842, 3174
Lsp1109I GCAGC 5 cut(s) 270, 1051, 1713, 2038, 2167
MaeI CTAG 5 cut(s) 14, 762, 1257, 2574, 3093
MaeII ACGT 2 cut(s) 518, 1488
MaeIII GTNAC 9 cut(s) 871, 1133, 1196, 1484, 1489, 1824, 2116, 2873, 3037
MbiI CCGCTC 1 cut(s) 1164
MflI RGATCY 8 cut(s) 23, 213, 226, 352, 727, 1243, 2233, 2390
MhlI GDGCHC 4 cut(s) 554, 853, 1003, 1656
Mly113I GGCGCC 1 cut(s) 832
MlyI GAGTC 7 cut(s) 458, 1154, 1453, 1754, 2120, 2481, 3189
MmeI TCCRAC 4 cut(s) 36, 728, 1264, 3048
Mph1103I ATGCAT 2 cut(s) 1368, 2721
MroI TCCGGA 1 cut(s) 216
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 8 cut(s) 297, 1746, 1886, 1934, 1982, 2337, 2519, 2852
MslI CAYNNNNRTG 4 cut(s) 1335, 1639, 2417, 2724
MspA1I CMGCKG 2 cut(s) 8, 1723
MspI CCGG 3 cut(s) 217, 242, 440
MspR9I CCNGG 2 cut(s) 114, 2220
Mva1269I GAATGC 1 cut(s) 1167
MvaI CCWGG 2 cut(s) 114, 2220
MvnI CGCG 1 cut(s) 8
MwoI GCNNNNNNNGC 5 cut(s) 14, 238, 974, 1047, 2060
NarI GGCGCC 1 cut(s) 832
NdeI CATATG 2 cut(s) 900, 1139
NlaIII CATG 7 cut(s) 493, 977, 1366, 1370, 1480, 1585, 2462
NlaIV GGNNCC 4 cut(s) 321, 833, 1567, 1844
NmuCI GTSAC 3 cut(s) 871, 1133, 1484
NsbI TGCGCA 1 cut(s) 1535
NsiI ATGCAT 2 cut(s) 1368, 2721
NspI RCATGY 2 cut(s) 977, 1585
PaeI GCATGC 1 cut(s) 977
PagI TCATGA 2 cut(s) 489, 2458
PciI ACATGT 1 cut(s) 1581
PctI GAATGC 1 cut(s) 1167
PdmI GAANNNNTTC 1 cut(s) 1101
PfeI GAWTC 6 cut(s) 194, 1102, 1349, 1691, 2609, 2943
PkrI GCNGC 8 cut(s) 7, 260, 1066, 1166, 1703, 2053, 2157, 2844
PleI GAGTC 7 cut(s) 457, 1153, 1453, 1754, 2120, 2480, 3188
PluTI GGCGCC 1 cut(s) 835
PpsI GAGTC 7 cut(s) 457, 1153, 1453, 1754, 2120, 2480, 3188
PpuMI RGGWCCY 1 cut(s) 823
PscI ACATGT 1 cut(s) 1581
PshAI GACNNNNGTC 1 cut(s) 2508
PsiI TTATAA 2 cut(s) 668, 1344
Psp5II RGGWCCY 1 cut(s) 823
Psp6I CCWGG 2 cut(s) 112, 2218
PspFI CCCAGC 1 cut(s) 816
PspGI CCWGG 2 cut(s) 112, 2218
PspN4I GGNNCC 4 cut(s) 321, 833, 1567, 1844
PspPI GGNCC 4 cut(s) 364, 823, 2381, 3207
PspPPI RGGWCCY 1 cut(s) 823
PstNI CAGNNNCTG 1 cut(s) 1999
PsuI RGATCY 8 cut(s) 23, 213, 226, 352, 727, 1243, 2233, 2390
PvuII CAGCTG 1 cut(s) 1723
RsaI GTAC 8 cut(s) 378, 593, 754, 910, 1567, 1596, 1614, 1771
RsaNI GTAC 8 cut(s) 377, 592, 753, 909, 1566, 1595, 1613, 1770
RseI CAYNNNNRTG 4 cut(s) 1335, 1639, 2417, 2724
SacII CCGCGG 1 cut(s) 9
SaqAI TTAA 8 cut(s) 297, 1746, 1886, 1934, 1982, 2337, 2519, 2852
SatI GCNGC 8 cut(s) 6, 259, 1065, 1165, 1702, 2052, 2156, 2843
Sau96I GGNCC 4 cut(s) 364, 823, 2381, 3207
SchI GAGTC 7 cut(s) 458, 1154, 1453, 1754, 2120, 2481, 3189
ScrFI CCNGG 2 cut(s) 114, 2220
SduI GDGCHC 4 cut(s) 554, 853, 1003, 1656
SfoI GGCGCC 1 cut(s) 833
Sfr303I CCGCGG 1 cut(s) 9
SgrBI CCGCGG 1 cut(s) 9
SinI GGWCC 2 cut(s) 364, 823
SmiMI CAYNNNNRTG 4 cut(s) 1335, 1639, 2417, 2724
SmlI CTYRAG 5 cut(s) 1312, 1421, 1505, 1645, 2783
SmoI CTYRAG 5 cut(s) 1312, 1421, 1505, 1645, 2783
SphI GCATGC 1 cut(s) 977
SspDI GGCGCC 1 cut(s) 831
SspMI CTAG 5 cut(s) 14, 762, 1257, 2574, 3093
StyD4I CCNGG 2 cut(s) 112, 2218
StyI CCWWGG 3 cut(s) 323, 1059, 3045
TaaI ACNGT 9 cut(s) 433, 678, 1133, 1450, 1557, 1961, 2510, 2920, 3161
TaiI ACGT 2 cut(s) 521, 1491
TaqI TCGA 6 cut(s) 165, 207, 680, 1586, 1656, 2360
TaqII GACCGA 1 cut(s) 2733
TatI WGTACW 2 cut(s) 591, 1769
TauI GCSGC 3 cut(s) 8, 1167, 2845
TfiI GAWTC 6 cut(s) 194, 1102, 1349, 1691, 2609, 2943
Tru1I TTAA 8 cut(s) 297, 1746, 1886, 1934, 1982, 2337, 2519, 2852
Tru9I TTAA 8 cut(s) 297, 1746, 1886, 1934, 1982, 2337, 2519, 2852
TscAI CASTG 5 cut(s) 1138, 1359, 1966, 2307, 2731
TseFI GTSAC 3 cut(s) 871, 1133, 1484
TseI GCWGC 5 cut(s) 258, 1064, 1701, 2051, 2155
Tsp45I GTSAC 3 cut(s) 871, 1133, 1484
TspDTI ATGAA 9 cut(s) 152, 171, 1362, 1493, 2106, 2401, 2475, 2964, 3076
TspGWI ACGGA 2 cut(s) 383, 2019
TspRI CASTG 5 cut(s) 1138, 1359, 1966, 2307, 2731
VneI GTGCAC 1 cut(s) 999
VpaK11BI GGWCC 2 cut(s) 364, 823
XapI RAATTY 7 cut(s) 2407, 2624, 2738, 2801, 2813, 2864, 2971
XceI RCATGY 2 cut(s) 977, 1585
XmiI GTMKAC 1 cut(s) 2911
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 5 cut(s) 14, 762, 1257, 2574, 3093
Zsp2I ATGCAT 2 cut(s) 1368, 2721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.