pycom07g02790

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
2355847 .. 2357400
1554 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g02790.1

Sequence Viewer

Length: 1554 bp
ATGGCAGGAGCTTTGATTGGAGAGGCTTTTCTCTCTGCTTCCATCCAGACGATGTGCGATAAGATTGGTTCCGGCGAGTTCTTGGATCTGTTTCGGGGGAAAAAGCTTGATCTTTCGCTCGTGGAGAACCTGAAGCTGACGTTGTTGACCCTTCATGCAGTGCTCAATGATGCAGAGGAGAAGCAGATTGTCAACCCTGCTGTGGGAAGCTGGCTCGACGAGCTCAAACATGCTGTCTTTGATGCGGAGGATCTACTTGATGAGATCGATGCTGAAGCTTTGCGCTCCAAGGTGGAAGCTGAATATCAAACTAAGAAAACCCAGGTGTGGAACTTCCTATCTACCTCTCTTAATCCGTTTTATCAAGGCATGAATGGTAGGATACAAGAGTTATTCAAAAGGTTAGAACACCTCGCAAAACAAATTAAGCTCCTTGGTCTTATAGGAGGTGTTAAGGGGAAAATTTCTCGAAGAGCTCCCACAACATTCTTGGTTGAGCATGAATTTTGTCCTTATGGTAGGGATGGAGATAAAGACAAGTTGAAAACAACGTTGCTATCTGATTATGCGAGTAGCAGCCACGTATCAGTAATCCCCATAGTGGGAATGGGCGGGGTTGGTAAGACAACCCTTGCTCAGGTCCTCTACAACGATGAAAAAATAAAAGAGCATTTTGATGTTACTGCTTGGGCATGTGTTTCCGAAGATTTTGATGCTATGAGGGTAACTAAAACCCTTATTGAATCAATTAGCTCAAAACCTTGCAGTCTTCAAGATAGCTTGCTTCAAGTTGACCTAAGGGAACAAGTGAGGGGGAAAAAGTTCCTATTTGTGTTGGACGACCTTTGGAATGACAACTATAGTGATTGGGATCTTCTAAGGGCTCCTTTTACTTATGGGGCGAGGGGAAGTAAGGTCATTGTAACAACGAGGAACAAAAGTGTTGCATCCCTAGTGCACACCGTGCCTATTCACTACTTGAAACATTTGTCGGATGAAGATTGTTGGTTGTTACTCGCAAAGCATGCATTTAGAAATAAAAATCCTAGTGCGCATCCAGACTTGGAAGAAATTGGTAAGCAAATTGCACGCAAGTGCAATGGTCTTCCTTTAGCTGCAAAAGCGCTTGGGGGTCTCTTAGGTTGTAATGTGGATTACGAGGAATGGAGTCACATATTGAACAGCAATCTTTGGGAGATATTGCATGATAAAGGTGTTCTTCCATCATTAAGATTGAGTTACCATTATCTCCCTACTTATTTGAAACAATGCTTTGCTTATTTCTCAATTTTTCCAAAGGACTGTGAATTTGAAAAGGAAAATATAATTCAACTTTGGATGGCACTGGGTTTAATTCAACAAGCTGAGAGTGGTAAAGGATTGGAAGAGGTCGGCAAGAGATACTTTGATGAACTATTGTCACGATCACTACTTCAAAGATCATTAACTGGGAAATCAAGTTTCACAATGCATGATCTCATTAACGACTTGGCAATGTCCGTCTCTGGAGAATTTTGTTTTAGGTTGGATGAGGGAGAGCCACATCGATCCTAA

Protein Analysis

518

Amino Acids

58.24

Weight (kDa)

5.93

Isoelectric Point (pI)

38.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 40 - 101 7.8e-17 Rx N-terminal domain
NB-ARC PF00931 177 - 347 3.7e-36 NB-ARC domain
WHD_DRP PF23559 430 - 498 4e-25 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1053
AciI CCGC 2 cut(s) 245, 612
AclI AACGTT 1 cut(s) 551
AclWI GGATC 4 cut(s) 93, 258, 879, 1542
AcsI RAATTY 4 cut(s) 462, 503, 1307, 1511
AcuI CTGAAG 2 cut(s) 152, 294
AdeI CACNNNGTG 1 cut(s) 964
AfeI AGCGCT 1 cut(s) 1125
AfiI CCNNNNNNNGG 6 cut(s) 202, 203, 327, 601, 602, 637
AjnI CCWGG 1 cut(s) 321
AleI CACNNNNGTG 1 cut(s) 1093
Alw21I GWGCWC 4 cut(s) 165, 225, 478, 960
Alw26I GTCTC 2 cut(s) 1139, 1507
Alw44I GTGCAC 1 cut(s) 956
AlwI GGATC 4 cut(s) 93, 258, 879, 1542
Aor51HI AGCGCT 1 cut(s) 1125
ApaLI GTGCAC 1 cut(s) 956
ApeKI GCWGC 2 cut(s) 576, 1115
ApoI RAATTY 4 cut(s) 462, 503, 1307, 1511
ArsI GACNNNNNNTTYG 4 cut(s) 219, 251, 1292, 1324
Asp700I GAANNNNTTC 1 cut(s) 821
AspLEI GCGC 3 cut(s) 285, 1054, 1126
AspS9I GGNCC 1 cut(s) 640
AvaII GGWCC 1 cut(s) 640
AxyI CCTNAGG 1 cut(s) 797
BaeGI GKGCMC 1 cut(s) 960
BaeI ACNNNNGTAYC 2 cut(s) 374, 407
BanII GRGCYC 3 cut(s) 225, 478, 886
BauI CACGAG 1 cut(s) 119
BbsI GAAGAC 2 cut(s) 761, 1097
Bbv12I GWGCWC 4 cut(s) 165, 225, 478, 960
BbvI GCAGC 2 cut(s) 588, 1102
BccI CCATC 4 cut(s) 50, 518, 1231, 1333
BciT130I CCWGG 1 cut(s) 323
BciVI GTATCC 1 cut(s) 375
BcoDI GTCTC 2 cut(s) 1139, 1507
BfaI CTAG 2 cut(s) 953, 1047
BfmI CTRYAG 1 cut(s) 859
BfoI RGCGCY 1 cut(s) 1127
BfuI GTATCC 1 cut(s) 375
BisI GCNGC 2 cut(s) 577, 1116
BlsI GCNGC 2 cut(s) 578, 1117
Bme1390I CCNGG 1 cut(s) 323
Bme18I GGWCC 1 cut(s) 640
BmgT120I GGNCC 1 cut(s) 640
BmiI GGNNCC 2 cut(s) 70, 885
BmrFI CCNGG 1 cut(s) 323
BmrI ACTGGG 2 cut(s) 1355, 1458
BmsI GCATC 6 cut(s) 160, 232, 259, 703, 956, 1063
BmuI ACTGGG 2 cut(s) 1355, 1458
BpiI GAAGAC 2 cut(s) 761, 1097
BpmI CTGGAG 1 cut(s) 1527
Bpu10I CCTNAGC 1 cut(s) 636
Bsa29I ATCGAT 2 cut(s) 267, 1546
BsaAI YACGTR 1 cut(s) 583
BsaBI GATNNNNATC 1 cut(s) 870
BsaI GGTCTC 1 cut(s) 1139
BsaJI CCNNGG 3 cut(s) 288, 321, 433
Bsc4I CCNNNNNNNGG 6 cut(s) 202, 203, 327, 601, 602, 637
Bse1I ACTGG 2 cut(s) 1350, 1453
Bse21I CCTNAGG 1 cut(s) 797
Bse3DI GCAATG 2 cut(s) 1105, 1500
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 1 cut(s) 323
BseCI ATCGAT 2 cut(s) 267, 1546
BseDI CCNNGG 3 cut(s) 288, 321, 433
BseGI GGATG 7 cut(s) 42, 529, 947, 1000, 1054, 1344, 1534
BseJI GATNNNNATC 1 cut(s) 870
BseLI CCNNNNNNNGG 6 cut(s) 202, 203, 327, 601, 602, 637
BseMI GCAATG 2 cut(s) 1105, 1500
BseMII CTCAG 2 cut(s) 650, 1356
BseNI ACTGG 2 cut(s) 1350, 1453
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 1 cut(s) 960
BseXI GCAGC 2 cut(s) 588, 1102
BshVI ATCGAT 2 cut(s) 267, 1546
BsiHKAI GWGCWC 4 cut(s) 165, 225, 478, 960
BsiSI CCGG 1 cut(s) 72
BslI CCNNNNNNNGG 6 cut(s) 202, 203, 327, 601, 602, 637
BsmAI GTCTC 2 cut(s) 1139, 1507
BsmBI CGTCTC 1 cut(s) 1507
Bso31I GGTCTC 1 cut(s) 1139
Bsp1286I GDGCHC 5 cut(s) 165, 225, 478, 886, 960
Bsp143I GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
BspACI CCGC 2 cut(s) 245, 612
BspCNI CTCAG 2 cut(s) 649, 1357
BspDI ATCGAT 2 cut(s) 267, 1546
BspLI GGNNCC 2 cut(s) 70, 885
BspPI GGATC 4 cut(s) 93, 258, 879, 1542
BspQI GCTCTTC 1 cut(s) 466
BspTNI GGTCTC 1 cut(s) 1139
BsrDI GCAATG 2 cut(s) 1105, 1500
BsrI ACTGG 2 cut(s) 1350, 1453
BssECI CCNNGG 3 cut(s) 288, 321, 433
BssMI GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
BssSI CACGAG 1 cut(s) 119
BssT1I CCWWGG 2 cut(s) 288, 433
Bst2BI CACGAG 1 cut(s) 119
Bst2UI CCWGG 1 cut(s) 323
Bst4CI ACNGT 2 cut(s) 964, 1304
Bst6I CTCTTC 2 cut(s) 466, 1380
BstAPI GCANNNNNTGC 2 cut(s) 964, 1025
BstBAI YACGTR 1 cut(s) 583
BstC8I GCNNGC 4 cut(s) 212, 782, 1026, 1090
BstDEI CTNAG 6 cut(s) 312, 636, 797, 878, 1138, 1365
BstENI CCTNNNNNAGG 1 cut(s) 635
BstF5I GGATG 7 cut(s) 42, 529, 947, 1000, 1054, 1344, 1534
BstH2I RGCGCY 1 cut(s) 1127
BstHHI GCGC 3 cut(s) 285, 1054, 1126
BstKTI GATC 9 cut(s) 88, 112, 253, 267, 874, 1427, 1442, 1477, 1550
BstMAI GTCTC 2 cut(s) 1139, 1507
BstMBI GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
BstMWI GCNNNNNNNGC 4 cut(s) 220, 964, 1025, 1121
BstNI CCWGG 1 cut(s) 323
BstNSI RCATGY 3 cut(s) 233, 696, 1028
BstSCI CCNGG 1 cut(s) 321
BstSFI CTRYAG 1 cut(s) 859
BstSLI GKGCMC 1 cut(s) 960
BstV1I GCAGC 2 cut(s) 588, 1102
BstV2I GAAGAC 2 cut(s) 761, 1097
BstX2I RGATCY 3 cut(s) 85, 250, 871
BstYI RGATCY 3 cut(s) 85, 250, 871
Bsu15I ATCGAT 2 cut(s) 267, 1546
Bsu36I CCTNAGG 1 cut(s) 797
BsuI GTATCC 1 cut(s) 375
BsuTUI ATCGAT 2 cut(s) 267, 1546
BtsCI GGATG 7 cut(s) 42, 529, 947, 1000, 1054, 1344, 1534
BtsI GCAGTG 1 cut(s) 165
BtsIMutI CAGTG 2 cut(s) 165, 1343
Cac8I GCNNGC 4 cut(s) 212, 782, 1026, 1090
CfoI GCGC 3 cut(s) 285, 1054, 1126
Cfr13I GGNCC 1 cut(s) 640
ClaI ATCGAT 2 cut(s) 267, 1546
CviAII CATG 8 cut(s) 155, 230, 370, 500, 693, 1025, 1205, 1472
DdeI CTNAG 6 cut(s) 312, 636, 797, 878, 1138, 1365
DpnI GATC 9 cut(s) 87, 111, 252, 266, 873, 1426, 1441, 1476, 1549
DpnII GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
DraIII CACNNNGTG 1 cut(s) 964
Eam1104I CTCTTC 2 cut(s) 466, 1380
EarI CTCTTC 2 cut(s) 466, 1380
Ecl136II GAGCTC 2 cut(s) 223, 476
Eco130I CCWWGG 2 cut(s) 288, 433
Eco24I GRGCYC 3 cut(s) 225, 478, 886
Eco31I GGTCTC 1 cut(s) 1139
Eco47I GGWCC 1 cut(s) 640
Eco47III AGCGCT 1 cut(s) 1125
Eco53kI GAGCTC 2 cut(s) 223, 476
Eco57I CTGAAG 2 cut(s) 152, 294
Eco81I CCTNAGG 1 cut(s) 797
EcoICRI GAGCTC 2 cut(s) 223, 476
EcoNI CCTNNNNNAGG 1 cut(s) 635
EcoO109I RGGNCCY 1 cut(s) 640
EcoRII CCWGG 1 cut(s) 321
EcoT14I CCWWGG 2 cut(s) 288, 433
EcoT22I ATGCAT 2 cut(s) 1030, 1473
EcoT38I GRGCYC 3 cut(s) 225, 478, 886
ErhI CCWWGG 2 cut(s) 288, 433
Esp3I CGTCTC 1 cut(s) 1507
FaeI CATG 8 cut(s) 158, 233, 373, 503, 696, 1028, 1208, 1475
FalI AAGNNNNNCTT 6 cut(s) 871, 903, 1203, 1235, 1388, 1420
FatI CATG 8 cut(s) 154, 229, 369, 499, 692, 1024, 1204, 1471
FauI CCCGC 1 cut(s) 605
Fnu4HI GCNGC 2 cut(s) 577, 1116
FokI GGATG 7 cut(s) 29, 536, 934, 1007, 1041, 1351, 1541
FriOI GRGCYC 3 cut(s) 225, 478, 886
Fsp4HI GCNGC 2 cut(s) 577, 1116
FspAI RTGCGCAY 1 cut(s) 1053
FspBI CTAG 2 cut(s) 953, 1047
FspI TGCGCA 1 cut(s) 1053
GlaI GCGC 3 cut(s) 284, 1053, 1125
GluI GCNGC 2 cut(s) 577, 1116
GsuI CTGGAG 1 cut(s) 1527
HaeII RGCGCY 1 cut(s) 1127
HapII CCGG 1 cut(s) 72
HhaI GCGC 3 cut(s) 285, 1054, 1126
Hin1II CATG 8 cut(s) 158, 233, 373, 503, 696, 1028, 1208, 1475
Hin6I GCGC 3 cut(s) 283, 1052, 1124
HinP1I GCGC 3 cut(s) 283, 1052, 1124
HincII GTYRAC 3 cut(s) 147, 193, 793
HindII GTYRAC 3 cut(s) 147, 193, 793
HindIII AAGCTT 2 cut(s) 104, 276
HinfI GANTC 2 cut(s) 743, 1168
HpaII CCGG 1 cut(s) 72
Hpy166II GTNNAC 4 cut(s) 147, 193, 793, 958
Hpy188I TCNGA 3 cut(s) 562, 703, 994
Hpy188III TCNNGA 6 cut(s) 46, 468, 773, 1058, 1422, 1506
Hpy8I GTNNAC 4 cut(s) 147, 193, 793, 958
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 1 cut(s) 161
HpyCH4III ACNGT 2 cut(s) 964, 1304
HpyCH4IV ACGT 3 cut(s) 140, 551, 582
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 964, 1025, 1121
HpyF3I CTNAG 6 cut(s) 312, 636, 797, 878, 1138, 1365
HpySE526I ACGT 3 cut(s) 140, 551, 582
Hsp92II CATG 8 cut(s) 158, 233, 373, 503, 696, 1028, 1208, 1475
HspAI GCGC 3 cut(s) 283, 1052, 1124
Kzo9I GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
LguI GCTCTTC 1 cut(s) 466
LmnI GCTCC 5 cut(s) 8, 290, 435, 481, 889
Lsp1109I GCAGC 2 cut(s) 588, 1102
LweI GCATC 6 cut(s) 160, 232, 259, 703, 956, 1063
MaeI CTAG 2 cut(s) 953, 1047
MaeII ACGT 3 cut(s) 140, 551, 582
MaeIII GTNAC 7 cut(s) 679, 724, 922, 1011, 1169, 1238, 1419
MalI GATC 9 cut(s) 87, 111, 252, 266, 873, 1426, 1441, 1476, 1549
MboI GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
MboII GAAGA 9 cut(s) 483, 716, 761, 866, 1010, 1079, 1097, 1211, 1397
MflI RGATCY 3 cut(s) 85, 250, 871
MhlI GDGCHC 5 cut(s) 165, 225, 478, 886, 960
MlyI GAGTC 1 cut(s) 1177
MmeI TCCRAC 3 cut(s) 816, 972, 1506
Mph1103I ATGCAT 2 cut(s) 1030, 1473
MroXI GAANNNNTTC 1 cut(s) 821
MseI TTAA 7 cut(s) 351, 426, 453, 1229, 1352, 1445, 1482
MslI CAYNNNNRTG 2 cut(s) 675, 1093
MspI CCGG 1 cut(s) 72
MspR9I CCNGG 1 cut(s) 323
MvaI CCWGG 1 cut(s) 323
MwoI GCNNNNNNNGC 4 cut(s) 220, 964, 1025, 1121
NdeII GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
NlaIII CATG 8 cut(s) 158, 233, 373, 503, 696, 1028, 1208, 1475
NlaIV GGNNCC 2 cut(s) 70, 885
NmuCI GTSAC 2 cut(s) 1169, 1419
NsbI TGCGCA 1 cut(s) 1053
NsiI ATGCAT 2 cut(s) 1030, 1473
NspI RCATGY 3 cut(s) 233, 696, 1028
OliI CACNNNNGTG 1 cut(s) 1093
PaeI GCATGC 1 cut(s) 1028
PciSI GCTCTTC 1 cut(s) 466
PdmI GAANNNNTTC 1 cut(s) 821
PfeI GAWTC 1 cut(s) 743
PkrI GCNGC 2 cut(s) 578, 1117
PleI GAGTC 1 cut(s) 1176
PpsI GAGTC 1 cut(s) 1176
Ppu21I YACGTR 1 cut(s) 583
PpuMI RGGWCCY 1 cut(s) 640
Psp124BI GAGCTC 2 cut(s) 225, 478
Psp1406I AACGTT 1 cut(s) 551
Psp5II RGGWCCY 1 cut(s) 640
Psp6I CCWGG 1 cut(s) 321
PspGI CCWGG 1 cut(s) 321
PspN4I GGNNCC 2 cut(s) 70, 885
PspPI GGNCC 1 cut(s) 640
PspPPI RGGWCCY 1 cut(s) 640
PsuI RGATCY 3 cut(s) 85, 250, 871
RseI CAYNNNNRTG 2 cut(s) 675, 1093
SacI GAGCTC 2 cut(s) 225, 478
SapI GCTCTTC 1 cut(s) 466
SaqAI TTAA 7 cut(s) 351, 426, 453, 1229, 1352, 1445, 1482
SatI GCNGC 2 cut(s) 577, 1116
Sau3AI GATC 9 cut(s) 85, 109, 250, 264, 871, 1424, 1439, 1474, 1547
Sau96I GGNCC 1 cut(s) 640
SchI GAGTC 1 cut(s) 1177
ScrFI CCNGG 1 cut(s) 323
SduI GDGCHC 5 cut(s) 165, 225, 478, 886, 960
SfaNI GCATC 6 cut(s) 160, 232, 259, 703, 956, 1063
SfcI CTRYAG 1 cut(s) 859
SinI GGWCC 1 cut(s) 640
SmiMI CAYNNNNRTG 2 cut(s) 675, 1093
SphI GCATGC 1 cut(s) 1028
SsiI CCGC 2 cut(s) 245, 612
SspMI CTAG 2 cut(s) 953, 1047
SstI GAGCTC 2 cut(s) 225, 478
StyD4I CCNGG 1 cut(s) 321
StyI CCWWGG 2 cut(s) 288, 433
TaaI ACNGT 2 cut(s) 964, 1304
TaiI ACGT 3 cut(s) 143, 554, 585
TaqI TCGA 4 cut(s) 216, 267, 469, 1546
TfiI GAWTC 1 cut(s) 743
Tru1I TTAA 7 cut(s) 351, 426, 453, 1229, 1352, 1445, 1482
Tru9I TTAA 7 cut(s) 351, 426, 453, 1229, 1352, 1445, 1482
TscAI CASTG 2 cut(s) 165, 1350
TseFI GTSAC 2 cut(s) 1169, 1419
TseI GCWGC 2 cut(s) 576, 1115
Tsp45I GTSAC 2 cut(s) 1169, 1419
TspDTI ATGAA 6 cut(s) 143, 386, 516, 669, 1011, 1425
TspGWI ACGGA 2 cut(s) 345, 1489
TspRI CASTG 2 cut(s) 165, 1350
VneI GTGCAC 1 cut(s) 956
VpaK11BI GGWCC 1 cut(s) 640
XagI CCTNNNNNAGG 1 cut(s) 635
XapI RAATTY 4 cut(s) 462, 503, 1307, 1511
XceI RCATGY 3 cut(s) 233, 696, 1028
XcmI CCANNNNNNNNNTGG 2 cut(s) 487, 604
XmnI GAANNNNTTC 1 cut(s) 821
XspI CTAG 2 cut(s) 953, 1047
Zsp2I ATGCAT 2 cut(s) 1030, 1473
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.