RchiOBHm_Chr5g0039241

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
33928443 .. 33930551
2109 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31782

Sequence Viewer

Length: 1092 bp
ATGATGCAGAGGAGAAGCAACTCAGAAACTCTAGAGTCAGGGATTGGCTTAATGAGCTTAAAGATGTTCTCTATCATGCCGATGACCTTTTGGATGAAATCAAGACTGAAGCTCTGCGTTGCAAGATGGAAGGAGAGGATTCTGGAAGCAGCCGCACAAATCAGGTACTGGAGTTTAGTTCTATTTCCATTCATGAACTTGACAAAAGTCTGGAACCCAGTGATACTGGACATTCTTGACAGATTAGAACTTATTGTCAACGAAAAAGATGTGCTTGATTTGAAAGAGGGTGTTAAAGATAGACCACAAGGAAGACTGCCCACAACTTCTTTGGTAGAAGAGTCTAGTGTATATGGAAGGGATGAAGAAAAGGAGGCCATTATCAAGTTATTGTTAGCGGATGGTGTGACTGGAAATAAGATAGATGTGCTTCCAATTGTGGGCATGGGTGGGCTTGGAAAGACCACTCTTGCTCAACTCGTATACAACGATGACAGAGTCAAGCAACATTTTGTCCATCAATCGTGGTCTTGTGTTTCAGTAGAATTTGAGGTTATCAAAATAACAGAGACACTTTATGGGGCGGTCACTTCACAAACTTGTAATAATAATATCACAGACCTAAACACGCTTCAAGTTAAACTAAAGGAGACGTTGTCAGGGAAGAAATTTCTCTTTGTTCTTGATGATGTTTGGACTGTGACTAATGACGAGTGGGATCTCTTAAGCCGACCCTTTGAGAGTGGTGGTCATGGAAGTAAGATCATTGTCACAACACGTCATGAAGATGTTGCAGGCATTATAGGTACGCTTCAAAGTCAACATCTAATGCAACTATCTGAGGAAAACTGCTGGTCGTTGTTCTCAAAACATGCCTTCAAGAATGCAGGTGTTACTGCAGATCTGTCGCTTGAATTGATTGGAAAACAGATTGGTCAAAAGTGTAAAGGACTCCCTTTAGCTGCAAAATCACTTGGGGGTCTTTTACGTTCTGAACCAAATATTGAGAAATGGGAAGAAGTGTTGAACAATGACATATGGGAGTTGCTAGATAAAAAGAATGGCATTTTGCCAGCTCTATGGTTGAGCTAG

Protein Analysis

363

Amino Acids

40.94

Weight (kDa)

5.96

Isoelectric Point (pI)

39.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 122 - 295 6.3e-37 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 878
Acc36I ACCTGC 1 cut(s) 878
AccI GTMKAC 1 cut(s) 483
AciI CCGC 3 cut(s) 153, 398, 584
AclWI GGATC 1 cut(s) 726
AcsI RAATTY 2 cut(s) 545, 668
AcuI CTGAAG 1 cut(s) 128
AfaI GTAC 2 cut(s) 167, 808
AfiI CCNNNNNNNGG 1 cut(s) 440
AflII CTTAAG 1 cut(s) 724
AflIII ACRYGT 1 cut(s) 776
AgsI TTSAA 6 cut(s) 283, 635, 815, 880, 914, 1027
AjiI CACGTC 1 cut(s) 779
AluBI AGCT 5 cut(s) 57, 112, 962, 1076, 1089
AluI AGCT 5 cut(s) 57, 112, 962, 1076, 1089
Alw26I GTCTC 2 cut(s) 563, 644
AlwI GGATC 1 cut(s) 726
AlwNI CAGNNNCTG 1 cut(s) 168
AoxI GGCC 1 cut(s) 375
ApeKI GCWGC 2 cut(s) 149, 962
ApoI RAATTY 2 cut(s) 545, 668
BaeI ACNNNNGTAYC 2 cut(s) 157, 190
BbsI GAAGAC 1 cut(s) 319
BbvI GCAGC 2 cut(s) 161, 949
BccI CCATC 3 cut(s) 120, 395, 525
BcgI CGANNNNNNTGC 2 cut(s) 888, 922
BcoDI GTCTC 2 cut(s) 563, 644
BfaI CTAG 4 cut(s) 32, 345, 1049, 1090
BfmI CTRYAG 1 cut(s) 897
BfrI CTTAAG 1 cut(s) 724
BfuAI ACCTGC 1 cut(s) 878
BglII AGATCT 1 cut(s) 901
BisI GCNGC 3 cut(s) 150, 153, 963
BlsI GCNGC 3 cut(s) 151, 154, 964
BmgBI CACGTC 1 cut(s) 779
BmiI GGNNCC 1 cut(s) 215
BmrI ACTGGG 1 cut(s) 212
BmuI ACTGGG 1 cut(s) 212
BoxI GACNNNNGTC 1 cut(s) 206
BpiI GAAGAC 1 cut(s) 319
BpmI CTGGAG 1 cut(s) 190
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 1 cut(s) 440
Bse1I ACTGG 4 cut(s) 173, 218, 231, 415
BseGI GGATG 3 cut(s) 99, 367, 406
BseLI CCNNNNNNNGG 1 cut(s) 440
BseMII CTCAG 2 cut(s) 36, 831
BseNI ACTGG 4 cut(s) 173, 218, 231, 415
BseRI GAGGAG 1 cut(s) 25
BseXI GCAGC 2 cut(s) 161, 949
BshFI GGCC 1 cut(s) 377
BslI CCNNNNNNNGG 1 cut(s) 440
BsmAI GTCTC 2 cut(s) 563, 644
BsmBI CGTCTC 1 cut(s) 644
BsmI GAATGC 1 cut(s) 889
BsnI GGCC 1 cut(s) 377
Bsp143I GATC 3 cut(s) 718, 762, 901
BspACI CCGC 3 cut(s) 153, 398, 584
BspANI GGCC 1 cut(s) 377
BspCNI CTCAG 2 cut(s) 35, 832
BspHI TCATGA 2 cut(s) 192, 781
BspLI GGNNCC 1 cut(s) 215
BspMAI CTGCAG 1 cut(s) 901
BspMI ACCTGC 1 cut(s) 878
BspPI GGATC 1 cut(s) 726
BspTI CTTAAG 1 cut(s) 724
BsrI ACTGG 4 cut(s) 173, 218, 231, 415
BssMI GATC 3 cut(s) 718, 762, 901
BssNAI GTATAC 1 cut(s) 484
Bst1107I GTATAC 1 cut(s) 484
Bst4CI ACNGT 1 cut(s) 700
Bst6I CTCTTC 1 cut(s) 333
BstAFI CTTAAG 1 cut(s) 724
BstC8I GCNNGC 2 cut(s) 796, 1074
BstDEI CTNAG 2 cut(s) 22, 840
BstF5I GGATG 3 cut(s) 99, 367, 406
BstKTI GATC 3 cut(s) 721, 765, 904
BstMAI GTCTC 2 cut(s) 563, 644
BstMBI GATC 3 cut(s) 718, 762, 901
BstMWI GCNNNNNNNGC 1 cut(s) 54
BstNSI RCATGY 1 cut(s) 875
BstPAI GACNNNNGTC 1 cut(s) 206
BstSFI CTRYAG 1 cut(s) 897
BstV1I GCAGC 2 cut(s) 161, 949
BstV2I GAAGAC 1 cut(s) 319
BstX2I RGATCY 2 cut(s) 718, 901
BstXI CCANNNNNNTGG 1 cut(s) 1080
BstYI RGATCY 2 cut(s) 718, 901
BstZ17I GTATAC 1 cut(s) 484
BsuRI GGCC 1 cut(s) 377
BtrI CACGTC 1 cut(s) 779
BtsCI GGATG 3 cut(s) 99, 367, 406
BtsIMutI CAGTG 1 cut(s) 225
BveI ACCTGC 1 cut(s) 878
Cac8I GCNNGC 2 cut(s) 796, 1074
CaiI CAGNNNCTG 1 cut(s) 168
CciI TCATGA 2 cut(s) 192, 781
Csp6I GTAC 2 cut(s) 166, 807
CviAII CATG 6 cut(s) 76, 193, 445, 752, 782, 872
CviQI GTAC 2 cut(s) 166, 807
DdeI CTNAG 2 cut(s) 22, 840
DpnI GATC 3 cut(s) 720, 764, 903
DpnII GATC 3 cut(s) 718, 762, 901
Eam1104I CTCTTC 1 cut(s) 333
EarI CTCTTC 1 cut(s) 333
Eco57I CTGAAG 1 cut(s) 128
Esp3I CGTCTC 1 cut(s) 644
FaeI CATG 6 cut(s) 79, 196, 448, 755, 785, 875
FalI AAGNNNNNCTT 2 cut(s) 258, 290
FatI CATG 6 cut(s) 75, 192, 444, 751, 781, 871
FauNDI CATATG 1 cut(s) 1037
FblI GTMKAC 1 cut(s) 483
Fnu4HI GCNGC 3 cut(s) 150, 153, 963
FokI GGATG 3 cut(s) 106, 374, 413
Fsp4HI GCNGC 3 cut(s) 150, 153, 963
FspBI CTAG 4 cut(s) 32, 345, 1049, 1090
GluI GCNGC 3 cut(s) 150, 153, 963
GsuI CTGGAG 1 cut(s) 190
HaeIII GGCC 1 cut(s) 377
Hin1II CATG 6 cut(s) 79, 196, 448, 755, 785, 875
HincII GTYRAC 2 cut(s) 259, 821
HindII GTYRAC 2 cut(s) 259, 821
HinfI GANTC 5 cut(s) 35, 139, 341, 498, 951
Hpy166II GTNNAC 3 cut(s) 259, 484, 821
Hpy188I TCNGA 3 cut(s) 25, 841, 994
Hpy188III TCNNGA 9 cut(s) 32, 102, 143, 193, 211, 236, 683, 782, 880
Hpy8I GTNNAC 3 cut(s) 259, 484, 821
HpyAV CCTTC 3 cut(s) 124, 351, 886
HpyCH4III ACNGT 1 cut(s) 700
HpyCH4IV ACGT 3 cut(s) 653, 778, 988
HpyCH4V TGCA 7 cut(s) 7, 122, 794, 832, 887, 899, 965
HpyF10VI GCNNNNNNNGC 1 cut(s) 54
HpyF3I CTNAG 2 cut(s) 22, 840
HpySE526I ACGT 3 cut(s) 653, 778, 988
Hsp92II CATG 6 cut(s) 79, 196, 448, 755, 785, 875
Kzo9I GATC 3 cut(s) 718, 762, 901
Lsp1109I GCAGC 2 cut(s) 161, 949
MaeI CTAG 4 cut(s) 32, 345, 1049, 1090
MaeII ACGT 3 cut(s) 653, 778, 988
MaeIII GTNAC 5 cut(s) 406, 586, 700, 769, 892
MalI GATC 3 cut(s) 720, 764, 903
MboI GATC 3 cut(s) 718, 762, 901
MboII GAAGA 6 cut(s) 324, 350, 377, 676, 797, 1028
MfeI CAATTG 1 cut(s) 435
MflI RGATCY 2 cut(s) 718, 901
MluCI AATT 4 cut(s) 435, 545, 668, 914
MlyI GAGTC 4 cut(s) 44, 350, 507, 945
MnlI CCTC 6 cut(s) 3, 129, 280, 367, 544, 835
MseI TTAA 5 cut(s) 50, 59, 294, 639, 725
MslI CAYNNNNRTG 2 cut(s) 80, 786
MspCI CTTAAG 1 cut(s) 724
MunI CAATTG 1 cut(s) 435
Mva1269I GAATGC 1 cut(s) 889
MwoI GCNNNNNNNGC 1 cut(s) 54
NdeI CATATG 1 cut(s) 1037
NdeII GATC 3 cut(s) 718, 762, 901
NlaIII CATG 6 cut(s) 79, 196, 448, 755, 785, 875
NlaIV GGNNCC 1 cut(s) 215
NmuCI GTSAC 4 cut(s) 406, 586, 700, 769
NspI RCATGY 1 cut(s) 875
PagI TCATGA 2 cut(s) 192, 781
PaqCI CACCTGC 1 cut(s) 878
PcsI WCGNNNNNNNCGW 1 cut(s) 486
PctI GAATGC 1 cut(s) 889
PfeI GAWTC 1 cut(s) 139
PflFI GACNNNGTC 2 cut(s) 497, 655
PkrI GCNGC 3 cut(s) 151, 154, 964
PleI GAGTC 4 cut(s) 43, 349, 506, 945
PpsI GAGTC 4 cut(s) 43, 349, 506, 945
PshAI GACNNNNGTC 1 cut(s) 206
PspN4I GGNNCC 1 cut(s) 215
PstI CTGCAG 1 cut(s) 901
PstNI CAGNNNCTG 1 cut(s) 168
PsuI RGATCY 2 cut(s) 718, 901
PsyI GACNNNGTC 2 cut(s) 497, 655
RsaI GTAC 2 cut(s) 167, 808
RsaNI GTAC 2 cut(s) 166, 807
RseI CAYNNNNRTG 2 cut(s) 80, 786
SaqAI TTAA 5 cut(s) 50, 59, 294, 639, 725
SatI GCNGC 3 cut(s) 150, 153, 963
Sau3AI GATC 3 cut(s) 718, 762, 901
SchI GAGTC 4 cut(s) 44, 350, 507, 945
SfcI CTRYAG 1 cut(s) 897
SmiMI CAYNNNNRTG 2 cut(s) 80, 786
SmlI CTYRAG 1 cut(s) 724
SmoI CTYRAG 1 cut(s) 724
Sse9I AATT 4 cut(s) 435, 545, 668, 914
SsiI CCGC 3 cut(s) 153, 398, 584
SspI AATATT 1 cut(s) 1003
SspMI CTAG 4 cut(s) 32, 345, 1049, 1090
TaaI ACNGT 1 cut(s) 700
TaiI ACGT 3 cut(s) 656, 781, 991
TasI AATT 4 cut(s) 435, 545, 668, 914
TauI GCSGC 1 cut(s) 155
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 5 cut(s) 50, 59, 294, 639, 725
Tru9I TTAA 5 cut(s) 50, 59, 294, 639, 725
TscAI CASTG 1 cut(s) 225
TseFI GTSAC 4 cut(s) 406, 586, 700, 769
TseI GCWGC 2 cut(s) 149, 962
Tsp45I GTSAC 4 cut(s) 406, 586, 700, 769
TspDTI ATGAA 5 cut(s) 110, 181, 209, 378, 798
TspRI CASTG 1 cut(s) 225
Tth111I GACNNNGTC 2 cut(s) 497, 655
Vha464I CTTAAG 1 cut(s) 724
XapI RAATTY 2 cut(s) 545, 668
XbaI TCTAGA 1 cut(s) 31
XceI RCATGY 1 cut(s) 875
XcmI CCANNNNNNNNNTGG 1 cut(s) 328
XmiI GTMKAC 1 cut(s) 483
XspI CTAG 4 cut(s) 32, 345, 1049, 1090
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.