Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 9 - 102 | 2.7e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 347 | 8.1e-29 | NB-ARC domain |
| WHD_DRP | PF23559 | 432 - 502 | 3.4e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 563 - 860 | 1.4e-29 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 681 - 808 | 8.6e-39 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1034 |
| Acc36I | ACCTGC | 1 cut(s) | 1034 |
| Acc65I | GGTACC | 2 cut(s) | 962, 1734 |
| AccB1I | GGYRCC | 2 cut(s) | 962, 1734 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1501 |
| AccBSI | CCGCTC | 1 cut(s) | 900 |
| AccI | GTMKAC | 3 cut(s) | 429, 2878, 2913 |
| AccII | CGCG | 2 cut(s) | 2073, 2646 |
| AccIII | TCCGGA | 1 cut(s) | 120 |
| AciI | CCGC | 6 cut(s) | 572, 900, 1262, 1867, 2073, 2283 |
| AclI | AACGTT | 1 cut(s) | 3154 |
| AclWI | GGATC | 6 cut(s) | 112, 1052, 1335, 2936, 2989, 3221 |
| AcsI | RAATTY | 5 cut(s) | 155, 368, 824, 1369, 2629 |
| AcuI | CTGAAG | 7 cut(s) | 27, 723, 738, 1289, 1371, 1718, 2045 |
| AcvI | CACGTG | 1 cut(s) | 935 |
| AfaI | GTAC | 8 cut(s) | 734, 964, 1446, 1557, 1736, 1837, 3125, 3150 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 111, 614, 1501, 1973, 2798, 2957, 3095 |
| AflII | CTTAAG | 1 cut(s) | 880 |
| AflIII | ACRYGT | 2 cut(s) | 932, 1441 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 682, 1009 |
| AhlI | ACTAGT | 2 cut(s) | 860, 3145 |
| AjnI | CCWGG | 2 cut(s) | 389, 2296 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2810, 2842 |
| Alw21I | GWGCWC | 1 cut(s) | 1722 |
| Alw26I | GTCTC | 8 cut(s) | 331, 881, 1519, 1803, 1937, 2123, 2669, 3161 |
| AlwI | GGATC | 6 cut(s) | 112, 1052, 1335, 2936, 2989, 3221 |
| Ama87I | CYCGRG | 1 cut(s) | 2264 |
| Aor13HI | TCCGGA | 1 cut(s) | 120 |
| AoxI | GGCC | 2 cut(s) | 549, 3182 |
| ApeKI | GCWGC | 6 cut(s) | 1118, 1750, 2389, 2751, 2962, 2965 |
| ApoI | RAATTY | 5 cut(s) | 155, 368, 824, 1369, 2629 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 2464, 2496, 2693, 2725 |
| AseI | ATTAAT | 1 cut(s) | 1913 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2574, 2617, 2787 |
| Asp718I | GGTACC | 2 cut(s) | 962, 1734 |
| AspLEI | GCGC | 2 cut(s) | 2073, 2665 |
| AspS9I | GGNCC | 2 cut(s) | 1647, 3183 |
| AsuC2I | CCSGG | 2 cut(s) | 1731, 2506 |
| AsuHPI | GGTGA | 6 cut(s) | 1571, 2045, 2204, 2449, 2881, 3028 |
| AsuII | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| AvaI | CYCGRG | 1 cut(s) | 2264 |
| AvaII | GGWCC | 1 cut(s) | 1647 |
| AxyI | CCTNAGG | 1 cut(s) | 2496 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1718, 1751 |
| BanI | GGYRCC | 2 cut(s) | 962, 1734 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 475, 507, 1344, 1376, 2559, 2591 |
| BauI | CACGAG | 2 cut(s) | 1418, 2287 |
| BbrPI | CACGTG | 1 cut(s) | 935 |
| BbsI | GAAGAC | 6 cut(s) | 107, 490, 1008, 1087, 1382, 2333 |
| Bbv12I | GWGCWC | 1 cut(s) | 1722 |
| BbvI | GCAGC | 6 cut(s) | 1105, 1737, 2401, 2738, 2949, 2952 |
| BceAI | ACGGC | 2 cut(s) | 2791, 3031 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1044, 1078 |
| BciT130I | CCWGG | 2 cut(s) | 391, 2298 |
| BciVI | GTATCC | 1 cut(s) | 387 |
| BclI | TGATCA | 1 cut(s) | 1609 |
| BcnI | CCSGG | 2 cut(s) | 1731, 2506 |
| BcoDI | GTCTC | 8 cut(s) | 331, 881, 1519, 1803, 1937, 2123, 2669, 3161 |
| BcuI | ACTAGT | 2 cut(s) | 860, 3145 |
| BfmI | CTRYAG | 1 cut(s) | 1053 |
| BfrI | CTTAAG | 1 cut(s) | 880 |
| BfuAI | ACCTGC | 1 cut(s) | 1034 |
| BfuI | GTATCC | 1 cut(s) | 387 |
| BglII | AGATCT | 3 cut(s) | 1354, 1987, 2311 |
| BisI | GCNGC | 7 cut(s) | 1119, 1751, 2284, 2390, 2752, 2963, 2966 |
| BlsI | GCNGC | 7 cut(s) | 1120, 1752, 2285, 2391, 2753, 2964, 2967 |
| BmcAI | AGTACT | 1 cut(s) | 1557 |
| Bme1390I | CCNGG | 4 cut(s) | 391, 1731, 2298, 2506 |
| Bme18I | GGWCC | 1 cut(s) | 1647 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 682, 1009 |
| BmeT110I | CYCGRG | 1 cut(s) | 2264 |
| BmgT120I | GGNCC | 2 cut(s) | 1647, 3183 |
| BmiI | GGNNCC | 2 cut(s) | 964, 1736 |
| BmrFI | CCNGG | 4 cut(s) | 391, 1731, 2298, 2506 |
| BmsI | GCATC | 7 cut(s) | 157, 1273, 1786, 1816, 1950, 2110, 2650 |
| BpiI | GAAGAC | 6 cut(s) | 107, 490, 1008, 1087, 1382, 2333 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 12, 44 |
| BpmI | CTGGAG | 2 cut(s) | 2249, 3062 |
| Bpu14I | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| BpuEI | CTTGAG | 4 cut(s) | 326, 1287, 1706, 2432 |
| BpuMI | CCSGG | 2 cut(s) | 1731, 2506 |
| BsaAI | YACGTR | 1 cut(s) | 935 |
| BsaI | GGTCTC | 3 cut(s) | 881, 2123, 2669 |
| BsaJI | CCNNGG | 7 cut(s) | 91, 108, 1730, 1967, 2124, 2505, 2794 |
| BsaWI | WCCGGW | 3 cut(s) | 73, 120, 1324 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 797, 827, 2385, 2415 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 111, 614, 1501, 1973, 2798, 2957, 3095 |
| Bse1I | ACTGG | 4 cut(s) | 589, 1563, 2035, 3079 |
| Bse21I | CCTNAGG | 1 cut(s) | 2496 |
| Bse3DI | GCAATG | 2 cut(s) | 1836, 2711 |
| BseAI | TCCGGA | 1 cut(s) | 120 |
| BseBI | CCWGG | 2 cut(s) | 391, 2298 |
| BseDI | CCNNGG | 7 cut(s) | 91, 108, 1730, 1967, 2124, 2505, 2794 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 111, 614, 1501, 1973, 2798, 2957, 3095 |
| BseMI | GCAATG | 2 cut(s) | 1836, 2711 |
| BseMII | CTCAG | 9 cut(s) | 199, 987, 1566, 1772, 2103, 2487, 2623, 2696, 2761 |
| BseNI | ACTGG | 4 cut(s) | 589, 1563, 2035, 3079 |
| BseRI | GAGGAG | 1 cut(s) | 188 |
| BseXI | GCAGC | 6 cut(s) | 1105, 1737, 2401, 2738, 2949, 2952 |
| Bsh1236I | CGCG | 2 cut(s) | 2073, 2646 |
| BshFI | GGCC | 2 cut(s) | 551, 3184 |
| BshNI | GGYRCC | 2 cut(s) | 962, 1734 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1722 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2264 |
| BsiSI | CCGG | 5 cut(s) | 74, 121, 1325, 1730, 2505 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 111, 614, 1501, 1973, 2798, 2957, 3095 |
| BsmAI | GTCTC | 8 cut(s) | 331, 881, 1519, 1803, 1937, 2123, 2669, 3161 |
| BsmI | GAATGC | 2 cut(s) | 1045, 2510 |
| BsnI | GGCC | 2 cut(s) | 551, 3184 |
| Bso31I | GGTCTC | 3 cut(s) | 881, 2123, 2669 |
| BsoBI | CYCGRG | 1 cut(s) | 2264 |
| Bsp119I | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1722 |
| Bsp13I | TCCGGA | 1 cut(s) | 120 |
| Bsp1407I | TGTACA | 1 cut(s) | 3123 |
| Bsp68I | TCGCGA | 1 cut(s) | 2646 |
| BspACI | CCGC | 6 cut(s) | 572, 900, 1262, 1867, 2073, 2283 |
| BspANI | GGCC | 2 cut(s) | 551, 3184 |
| BspCNI | CTCAG | 9 cut(s) | 198, 988, 1565, 1773, 2102, 2488, 2622, 2697, 2760 |
| BspEI | TCCGGA | 1 cut(s) | 120 |
| BspFNI | CGCG | 2 cut(s) | 2073, 2646 |
| BspLI | GGNNCC | 2 cut(s) | 964, 1736 |
| BspMAI | CTGCAG | 1 cut(s) | 1057 |
| BspMI | ACCTGC | 1 cut(s) | 1034 |
| BspPI | GGATC | 6 cut(s) | 112, 1052, 1335, 2936, 2989, 3221 |
| BspT104I | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| BspT107I | GGYRCC | 2 cut(s) | 962, 1734 |
| BspTI | CTTAAG | 1 cut(s) | 880 |
| BspTNI | GGTCTC | 3 cut(s) | 881, 2123, 2669 |
| BsrBI | CCGCTC | 1 cut(s) | 900 |
| BsrDI | GCAATG | 2 cut(s) | 1836, 2711 |
| BsrGI | TGTACA | 1 cut(s) | 3123 |
| BsrI | ACTGG | 4 cut(s) | 589, 1563, 2035, 3079 |
| BssECI | CCNNGG | 7 cut(s) | 91, 108, 1730, 1967, 2124, 2505, 2794 |
| BssSI | CACGAG | 2 cut(s) | 1418, 2287 |
| BssT1I | CCWWGG | 3 cut(s) | 1967, 2124, 2794 |
| Bst2BI | CACGAG | 2 cut(s) | 1418, 2287 |
| Bst2UI | CCWGG | 2 cut(s) | 391, 2298 |
| Bst6I | CTCTTC | 2 cut(s) | 37, 2580 |
| BstAFI | CTTAAG | 1 cut(s) | 880 |
| BstAUI | TGTACA | 1 cut(s) | 3123 |
| BstBAI | YACGTR | 1 cut(s) | 935 |
| BstBI | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| BstC8I | GCNNGC | 4 cut(s) | 952, 1230, 2524, 3086 |
| BstEII | GGTNACC | 1 cut(s) | 2500 |
| BstFNI | CGCG | 2 cut(s) | 2073, 2646 |
| BstHHI | GCGC | 2 cut(s) | 2073, 2665 |
| BstMAI | GTCTC | 8 cut(s) | 331, 881, 1519, 1803, 1937, 2123, 2669, 3161 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 217, 1270, 1783, 2077, 2662 |
| BstNI | CCWGG | 2 cut(s) | 391, 2298 |
| BstNSI | RCATGY | 3 cut(s) | 1031, 1445, 2728 |
| BstPI | GGTNACC | 1 cut(s) | 2500 |
| BstSCI | CCNGG | 4 cut(s) | 389, 1729, 2296, 2504 |
| BstSFI | CTRYAG | 1 cut(s) | 1053 |
| BstUI | CGCG | 2 cut(s) | 2073, 2646 |
| BstV1I | GCAGC | 6 cut(s) | 1105, 1737, 2401, 2738, 2949, 2952 |
| BstV2I | GAAGAC | 6 cut(s) | 107, 490, 1008, 1087, 1382, 2333 |
| BstX2I | RGATCY | 7 cut(s) | 1057, 1327, 1354, 1987, 2311, 2941, 3213 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1236 |
| BstYI | RGATCY | 7 cut(s) | 1057, 1327, 1354, 1987, 2311, 2941, 3213 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2496 |
| BsuI | GTATCC | 1 cut(s) | 387 |
| BsuRI | GGCC | 2 cut(s) | 551, 3184 |
| BtgZI | GCGATG | 1 cut(s) | 2661 |
| BtsI | GCAGTG | 2 cut(s) | 875, 2876 |
| BtsIMutI | CAGTG | 5 cut(s) | 875, 1185, 2028, 2876, 3086 |
| BtuMI | TCGCGA | 1 cut(s) | 2646 |
| BveI | ACCTGC | 1 cut(s) | 1034 |
| Cac8I | GCNNGC | 4 cut(s) | 952, 1230, 2524, 3086 |
| CfoI | GCGC | 2 cut(s) | 2073, 2665 |
| Cfr13I | GGNCC | 2 cut(s) | 1647, 3183 |
| CseI | GACGC | 1 cut(s) | 1913 |
| Csp6I | GTAC | 8 cut(s) | 733, 963, 1445, 1556, 1735, 1836, 3124, 3149 |
| CviQI | GTAC | 8 cut(s) | 733, 963, 1445, 1556, 1735, 1836, 3124, 3149 |
| DriI | GACNNNNNGTC | 2 cut(s) | 682, 1009 |
| Eam1104I | CTCTTC | 2 cut(s) | 37, 2580 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 682, 1009 |
| EarI | CTCTTC | 2 cut(s) | 37, 2580 |
| Eco130I | CCWWGG | 3 cut(s) | 1967, 2124, 2794 |
| Eco31I | GGTCTC | 3 cut(s) | 881, 2123, 2669 |
| Eco47I | GGWCC | 1 cut(s) | 1647 |
| Eco57I | CTGAAG | 7 cut(s) | 27, 723, 738, 1289, 1371, 1718, 2045 |
| Eco72I | CACGTG | 1 cut(s) | 935 |
| Eco81I | CCTNAGG | 1 cut(s) | 2496 |
| Eco88I | CYCGRG | 1 cut(s) | 2264 |
| Eco91I | GGTNACC | 1 cut(s) | 2500 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1647 |
| EcoO65I | GGTNACC | 1 cut(s) | 2500 |
| EcoRI | GAATTC | 1 cut(s) | 1369 |
| EcoRII | CCWGG | 2 cut(s) | 389, 2296 |
| EcoT14I | CCWWGG | 3 cut(s) | 1967, 2124, 2794 |
| EcoT22I | ATGCAT | 1 cut(s) | 1485 |
| ErhI | CCWWGG | 3 cut(s) | 1967, 2124, 2794 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 429, 461 |
| FauNDI | CATATG | 1 cut(s) | 1193 |
| FbaI | TGATCA | 1 cut(s) | 1609 |
| FblI | GTMKAC | 3 cut(s) | 429, 2878, 2913 |
| Fnu4HI | GCNGC | 7 cut(s) | 1119, 1751, 2284, 2390, 2752, 2963, 2966 |
| Fsp4HI | GCNGC | 7 cut(s) | 1119, 1751, 2284, 2390, 2752, 2963, 2966 |
| GlaI | GCGC | 2 cut(s) | 2072, 2664 |
| GluI | GCNGC | 7 cut(s) | 1119, 1751, 2284, 2390, 2752, 2963, 2966 |
| GsuI | CTGGAG | 2 cut(s) | 2249, 3062 |
| HaeIII | GGCC | 2 cut(s) | 551, 3184 |
| HapII | CCGG | 5 cut(s) | 74, 121, 1325, 1730, 2505 |
| HgaI | GACGC | 1 cut(s) | 1913 |
| HhaI | GCGC | 2 cut(s) | 2073, 2665 |
| Hin6I | GCGC | 2 cut(s) | 2071, 2663 |
| HinP1I | GCGC | 2 cut(s) | 2071, 2663 |
| HincII | GTYRAC | 4 cut(s) | 430, 750, 977, 2914 |
| HindII | GTYRAC | 4 cut(s) | 430, 750, 977, 2914 |
| HindIII | AAGCTT | 3 cut(s) | 1700, 2474, 2534 |
| HpaII | CCGG | 5 cut(s) | 74, 121, 1325, 1730, 2505 |
| HphI | GGTGA | 6 cut(s) | 1571, 2045, 2204, 2449, 2881, 3028 |
| Hpy166II | GTNNAC | 8 cut(s) | 430, 750, 977, 1836, 2879, 2914, 2930, 3027 |
| Hpy8I | GTNNAC | 8 cut(s) | 430, 750, 977, 1836, 2879, 2914, 2930, 3027 |
| Hpy99I | CGWCG | 5 cut(s) | 434, 1066, 1369, 2204, 2915 |
| HpyAV | CCTTC | 7 cut(s) | 452, 525, 698, 935, 977, 1042, 2744 |
| HpyCH4IV | ACGT | 5 cut(s) | 125, 934, 1144, 1856, 3154 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 217, 1270, 1783, 2077, 2662 |
| HpySE526I | ACGT | 5 cut(s) | 125, 934, 1144, 1856, 3154 |
| HspAI | GCGC | 2 cut(s) | 2071, 2663 |
| Kpn2I | TCCGGA | 1 cut(s) | 120 |
| KpnI | GGTACC | 2 cut(s) | 966, 1738 |
| Ksp22I | TGATCA | 1 cut(s) | 1609 |
| LmnI | GCTCC | 1 cut(s) | 20 |
| Lsp1109I | GCAGC | 6 cut(s) | 1105, 1737, 2401, 2738, 2949, 2952 |
| LweI | GCATC | 7 cut(s) | 157, 1273, 1786, 1816, 1950, 2110, 2650 |
| MaeII | ACGT | 5 cut(s) | 125, 934, 1144, 1856, 3154 |
| MbiI | CCGCTC | 1 cut(s) | 900 |
| MfeI | CAATTG | 2 cut(s) | 609, 3064 |
| MflI | RGATCY | 7 cut(s) | 1057, 1327, 1354, 1987, 2311, 2941, 3213 |
| MhlI | GDGCHC | 1 cut(s) | 1722 |
| MlyI | GAGTC | 6 cut(s) | 207, 333, 669, 1101, 1544, 1585 |
| MmeI | TCCRAC | 5 cut(s) | 234, 1375, 2263, 2286, 2796 |
| Mph1103I | ATGCAT | 1 cut(s) | 1485 |
| MroI | TCCGGA | 1 cut(s) | 120 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2574, 2617, 2787 |
| MslI | CAYNNNNRTG | 2 cut(s) | 243, 1743 |
| MspA1I | CMGCKG | 1 cut(s) | 2751 |
| MspCI | CTTAAG | 1 cut(s) | 880 |
| MspI | CCGG | 5 cut(s) | 74, 121, 1325, 1730, 2505 |
| MspR9I | CCNGG | 4 cut(s) | 391, 1731, 2298, 2506 |
| MunI | CAATTG | 2 cut(s) | 609, 3064 |
| Mva1269I | GAATGC | 2 cut(s) | 1045, 2510 |
| MvaI | CCWGG | 2 cut(s) | 391, 2298 |
| MvnI | CGCG | 2 cut(s) | 2073, 2646 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 217, 1270, 1783, 2077, 2662 |
| NciI | CCSGG | 2 cut(s) | 1731, 2506 |
| NdeI | CATATG | 1 cut(s) | 1193 |
| NlaIV | GGNNCC | 2 cut(s) | 964, 1736 |
| NmuCI | GTSAC | 8 cut(s) | 856, 925, 1577, 1659, 2113, 2192, 2437, 2602 |
| NruI | TCGCGA | 1 cut(s) | 2646 |
| NsiI | ATGCAT | 1 cut(s) | 1485 |
| NspI | RCATGY | 3 cut(s) | 1031, 1445, 2728 |
| NspV | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| PaeR7I | CTCGAG | 1 cut(s) | 2264 |
| PaqCI | CACCTGC | 1 cut(s) | 1034 |
| PciI | ACATGT | 1 cut(s) | 1441 |
| PctI | GAATGC | 2 cut(s) | 1045, 2510 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2574, 2617, 2787 |
| PfeI | GAWTC | 8 cut(s) | 65, 386, 2095, 2269, 2416, 2486, 2570, 2783 |
| PflFI | GACNNNGTC | 1 cut(s) | 659 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1501 |
| PfoI | TCCNGGA | 1 cut(s) | 389 |
| PkrI | GCNGC | 7 cut(s) | 1120, 1752, 2285, 2391, 2753, 2964, 2967 |
| PleI | GAGTC | 6 cut(s) | 206, 333, 668, 1101, 1544, 1584 |
| PmaCI | CACGTG | 1 cut(s) | 935 |
| PmlI | CACGTG | 1 cut(s) | 935 |
| PpsI | GAGTC | 6 cut(s) | 206, 333, 668, 1101, 1544, 1584 |
| Ppu21I | YACGTR | 1 cut(s) | 935 |
| PpuMI | RGGWCCY | 1 cut(s) | 1647 |
| PscI | ACATGT | 1 cut(s) | 1441 |
| PshBI | ATTAAT | 1 cut(s) | 1913 |
| Psp1406I | AACGTT | 1 cut(s) | 3154 |
| Psp5II | RGGWCCY | 1 cut(s) | 1647 |
| Psp6I | CCWGG | 2 cut(s) | 389, 2296 |
| PspCI | CACGTG | 1 cut(s) | 935 |
| PspEI | GGTNACC | 1 cut(s) | 2500 |
| PspGI | CCWGG | 2 cut(s) | 389, 2296 |
| PspN4I | GGNNCC | 2 cut(s) | 964, 1736 |
| PspPI | GGNCC | 2 cut(s) | 1647, 3183 |
| PspPPI | RGGWCCY | 1 cut(s) | 1647 |
| PstI | CTGCAG | 1 cut(s) | 1057 |
| PsuI | RGATCY | 7 cut(s) | 1057, 1327, 1354, 1987, 2311, 2941, 3213 |
| PsyI | GACNNNGTC | 1 cut(s) | 659 |
| PvuII | CAGCTG | 1 cut(s) | 2751 |
| RruI | TCGCGA | 1 cut(s) | 2646 |
| RsaI | GTAC | 8 cut(s) | 734, 964, 1446, 1557, 1736, 1837, 3125, 3150 |
| RsaNI | GTAC | 8 cut(s) | 733, 963, 1445, 1556, 1735, 1836, 3124, 3149 |
| RseI | CAYNNNNRTG | 2 cut(s) | 243, 1743 |
| SalI | GTCGAC | 2 cut(s) | 428, 2912 |
| SatI | GCNGC | 7 cut(s) | 1119, 1751, 2284, 2390, 2752, 2963, 2966 |
| Sau96I | GGNCC | 2 cut(s) | 1647, 3183 |
| ScaI | AGTACT | 1 cut(s) | 1557 |
| SchI | GAGTC | 6 cut(s) | 207, 333, 669, 1101, 1544, 1585 |
| ScrFI | CCNGG | 4 cut(s) | 391, 1731, 2298, 2506 |
| SduI | GDGCHC | 1 cut(s) | 1722 |
| SfaNI | GCATC | 7 cut(s) | 157, 1273, 1786, 1816, 1950, 2110, 2650 |
| SfcI | CTRYAG | 1 cut(s) | 1053 |
| Sfr274I | CTCGAG | 1 cut(s) | 2264 |
| SfuI | TTCGAA | 3 cut(s) | 1373, 2470, 3005 |
| SinI | GGWCC | 1 cut(s) | 1647 |
| SlaI | CTCGAG | 1 cut(s) | 2264 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 243, 1743 |
| SmlI | CTYRAG | 6 cut(s) | 341, 880, 1302, 1721, 2264, 2411 |
| SmoI | CTYRAG | 6 cut(s) | 341, 880, 1302, 1721, 2264, 2411 |
| SpeI | ACTAGT | 2 cut(s) | 860, 3145 |
| SsiI | CCGC | 6 cut(s) | 572, 900, 1262, 1867, 2073, 2283 |
| SspI | AATATT | 2 cut(s) | 1159, 2104 |
| StyD4I | CCNGG | 4 cut(s) | 389, 1729, 2296, 2504 |
| StyI | CCWWGG | 3 cut(s) | 1967, 2124, 2794 |
| TaiI | ACGT | 5 cut(s) | 128, 937, 1147, 1859, 3157 |
| TaqII | GACCGA | 1 cut(s) | 672 |
| TatI | WGTACW | 5 cut(s) | 732, 1555, 1835, 3123, 3148 |
| TauI | GCSGC | 1 cut(s) | 2286 |
| TfiI | GAWTC | 8 cut(s) | 65, 386, 2095, 2269, 2416, 2486, 2570, 2783 |
| TscAI | CASTG | 5 cut(s) | 875, 1192, 2035, 2876, 3086 |
| TseFI | GTSAC | 8 cut(s) | 856, 925, 1577, 1659, 2113, 2192, 2437, 2602 |
| TseI | GCWGC | 6 cut(s) | 1118, 1750, 2389, 2751, 2962, 2965 |
| Tsp45I | GTSAC | 8 cut(s) | 856, 925, 1577, 1659, 2113, 2192, 2437, 2602 |
| TspGWI | ACGGA | 3 cut(s) | 447, 1050, 2132 |
| TspRI | CASTG | 5 cut(s) | 875, 1192, 2035, 2876, 3086 |
| Tth111I | GACNNNGTC | 1 cut(s) | 659 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1501 |
| Vha464I | CTTAAG | 1 cut(s) | 880 |
| VpaK11BI | GGWCC | 1 cut(s) | 1647 |
| VspI | ATTAAT | 1 cut(s) | 1913 |
| XapI | RAATTY | 5 cut(s) | 155, 368, 824, 1369, 2629 |
| XbaI | TCTAGA | 1 cut(s) | 194 |
| XceI | RCATGY | 3 cut(s) | 1031, 1445, 2728 |
| XhoI | CTCGAG | 1 cut(s) | 2264 |
| XmiI | GTMKAC | 3 cut(s) | 429, 2878, 2913 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2574, 2617, 2787 |
| ZrmI | AGTACT | 1 cut(s) | 1557 |
| Zsp2I | ATGCAT | 1 cut(s) | 1485 |