Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 21 - 104 | 6.2e-15 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 274 | 1e-15 | NB-ARC domain |
| WHD_DRP | PF23559 | 409 - 475 | 5.7e-27 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 536 - 835 | 7.3e-22 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 612 - 731 | 2.6e-32 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1242, 1539 |
| Acc16I | TGCGCA | 1 cut(s) | 1577 |
| Acc36I | ACCTGC | 1 cut(s) | 2016 |
| Acc65I | GGTACC | 1 cut(s) | 1719 |
| AccB1I | GGYRCC | 4 cut(s) | 1719, 2779, 3285, 3308 |
| AccBSI | CCGCTC | 2 cut(s) | 29, 2413 |
| AccI | GTMKAC | 3 cut(s) | 372, 2992, 3409 |
| AccII | CGCG | 1 cut(s) | 2522 |
| AccIII | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| AclI | AACGTT | 2 cut(s) | 448, 1790 |
| AclWI | GGATC | 2 cut(s) | 620, 983 |
| AcoI | YGGCCR | 1 cut(s) | 1278 |
| AcuI | CTGAAG | 2 cut(s) | 525, 2630 |
| AcyI | GRCGYC | 2 cut(s) | 585, 2780 |
| AfaI | GTAC | 7 cut(s) | 327, 901, 1184, 1614, 1721, 1810, 3398 |
| AflIII | ACRYGT | 3 cut(s) | 1431, 1663, 1811 |
| AjiI | CACGTC | 1 cut(s) | 3413 |
| AjnI | CCWGG | 2 cut(s) | 2068, 2299 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 288, 320, 953, 985, 1298, 1330 |
| AleI | CACNNNNGTG | 1 cut(s) | 3283 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2475, 2507 |
| Alw26I | GTCTC | 7 cut(s) | 1073, 1194, 2646, 2655, 3288, 3297, 3311 |
| AlwI | GGATC | 2 cut(s) | 620, 983 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 214, 2653 |
| Ama87I | CYCGRG | 2 cut(s) | 678, 3173 |
| Aor13HI | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| AoxI | GGCC | 5 cut(s) | 1036, 1278, 1914, 2231, 3335 |
| ApeKI | GCWGC | 7 cut(s) | 214, 664, 1049, 2011, 2554, 3082, 3085 |
| AseI | ATTAAT | 1 cut(s) | 1262 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2904, 3066 |
| Asp718I | GGTACC | 1 cut(s) | 1719 |
| AspLEI | GCGC | 6 cut(s) | 825, 1578, 1860, 2522, 2563, 2782 |
| AspS9I | GGNCC | 3 cut(s) | 250, 2231, 3335 |
| AsuHPI | GGTGA | 6 cut(s) | 214, 856, 1976, 2318, 2995, 3364 |
| AvaI | CYCGRG | 2 cut(s) | 678, 3173 |
| AvaII | GGWCC | 1 cut(s) | 250 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2041, 2074 |
| BanI | GGYRCC | 4 cut(s) | 1719, 2779, 3285, 3308 |
| BanII | GRGCYC | 1 cut(s) | 678 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1275, 1307 |
| BbsI | GAAGAC | 6 cut(s) | 945, 1018, 1313, 1371, 1467, 1849 |
| BbvCI | CCTCAGC | 3 cut(s) | 246, 1199, 1899 |
| BbvI | GCAGC | 7 cut(s) | 201, 676, 1036, 2023, 2541, 3069, 3072 |
| BceAI | ACGGC | 2 cut(s) | 2908, 3160 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2429, 2463 |
| BciT130I | CCWGG | 2 cut(s) | 2070, 2301 |
| BciVI | GTATCC | 1 cut(s) | 2042 |
| BclI | TGATCA | 1 cut(s) | 3369 |
| BcoDI | GTCTC | 7 cut(s) | 1073, 1194, 2646, 2655, 3288, 3297, 3311 |
| BfaI | CTAG | 2 cut(s) | 1817, 2000 |
| BfmI | CTRYAG | 4 cut(s) | 369, 1637, 2009, 2774 |
| BfoI | RGCGCY | 2 cut(s) | 826, 2783 |
| BfuAI | ACCTGC | 1 cut(s) | 2016 |
| BfuI | GTATCC | 1 cut(s) | 2042 |
| BglII | AGATCT | 1 cut(s) | 1285 |
| BlpI | GCTNAGC | 3 cut(s) | 404, 633, 1172 |
| BmcAI | AGTACT | 1 cut(s) | 1184 |
| Bme1390I | CCNGG | 2 cut(s) | 2070, 2301 |
| Bme18I | GGWCC | 1 cut(s) | 250 |
| BmeT110I | CYCGRG | 2 cut(s) | 678, 3173 |
| BmgBI | CACGTC | 1 cut(s) | 3413 |
| BmgT120I | GGNCC | 3 cut(s) | 250, 2231, 3335 |
| BmiI | GGNNCC | 5 cut(s) | 25, 1721, 2781, 3287, 3310 |
| BmrFI | CCNGG | 2 cut(s) | 2070, 2301 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2361 |
| BpiI | GAAGAC | 6 cut(s) | 945, 1018, 1313, 1371, 1467, 1849 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 15, 47, 2078, 2110 |
| BpmI | CTGGAG | 9 cut(s) | 143, 858, 2270, 2322, 2874, 2971, 3191, 3321, 3344 |
| Bpu10I | CCTNAGC | 3 cut(s) | 246, 1199, 1899 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 404, 633, 1172 |
| BpuEI | CTTGAG | 7 cut(s) | 416, 782, 953, 1019, 2138, 2429, 2524 |
| BsaAI | YACGTR | 5 cut(s) | 191, 242, 1432, 1664, 3400 |
| BsaBI | GATNNNNATC | 3 cut(s) | 993, 2801, 2846 |
| BsaHI | GRCGYC | 2 cut(s) | 585, 2780 |
| BsaI | GGTCTC | 1 cut(s) | 1073 |
| BsaJI | CCNNGG | 2 cut(s) | 197, 2299 |
| BsaWI | WCCGGW | 4 cut(s) | 1192, 1756, 2689, 2908 |
| Bse118I | RCCGGY | 1 cut(s) | 1159 |
| Bse1I | ACTGG | 5 cut(s) | 261, 1180, 3262, 3304, 3327 |
| Bse3DI | GCAATG | 1 cut(s) | 473 |
| Bse8I | GATNNNNATC | 3 cut(s) | 993, 2801, 2846 |
| BseAI | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| BseBI | CCWGG | 2 cut(s) | 2070, 2301 |
| BseDI | CCNNGG | 2 cut(s) | 197, 2299 |
| BseGI | GGATG | 7 cut(s) | 433, 808, 1281, 1909, 2708, 2816, 3350 |
| BseJI | GATNNNNATC | 3 cut(s) | 993, 2801, 2846 |
| BseMI | GCAATG | 1 cut(s) | 473 |
| BseNI | ACTGG | 5 cut(s) | 261, 1180, 3262, 3304, 3327 |
| BseRI | GAGGAG | 3 cut(s) | 2633, 2781, 2852 |
| BseXI | GCAGC | 7 cut(s) | 201, 676, 1036, 2023, 2541, 3069, 3072 |
| Bsh1236I | CGCG | 1 cut(s) | 2522 |
| BshFI | GGCC | 5 cut(s) | 1038, 1280, 1916, 2233, 3337 |
| BshNI | GGYRCC | 4 cut(s) | 1719, 2779, 3285, 3308 |
| BsiHKCI | CYCGRG | 2 cut(s) | 678, 3173 |
| BsiSI | CCGG | 5 cut(s) | 1160, 1193, 1757, 2690, 2909 |
| BslFI | GGGAC | 3 cut(s) | 1940, 2152, 2349 |
| BsmAI | GTCTC | 7 cut(s) | 1073, 1194, 2646, 2655, 3288, 3297, 3311 |
| BsmBI | CGTCTC | 2 cut(s) | 2646, 3297 |
| BsmFI | GGGAC | 3 cut(s) | 1940, 2152, 2349 |
| BsmI | GAATGC | 1 cut(s) | 2468 |
| BsnI | GGCC | 5 cut(s) | 1038, 1280, 1916, 2233, 3337 |
| Bso31I | GGTCTC | 1 cut(s) | 1073 |
| BsoBI | CYCGRG | 2 cut(s) | 678, 3173 |
| Bsp1286I | GDGCHC | 1 cut(s) | 678 |
| Bsp13I | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| Bsp1407I | TGTACA | 1 cut(s) | 1808 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 404, 633, 1172 |
| BspANI | GGCC | 5 cut(s) | 1038, 1280, 1916, 2233, 3337 |
| BspEI | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| BspFNI | CGCG | 1 cut(s) | 2522 |
| BspHI | TCATGA | 1 cut(s) | 523 |
| BspLI | GGNNCC | 5 cut(s) | 25, 1721, 2781, 3287, 3310 |
| BspMAI | CTGCAG | 2 cut(s) | 2013, 2778 |
| BspMI | ACCTGC | 1 cut(s) | 2016 |
| BspPI | GGATC | 2 cut(s) | 620, 983 |
| BspT107I | GGYRCC | 4 cut(s) | 1719, 2779, 3285, 3308 |
| BspTNI | GGTCTC | 1 cut(s) | 1073 |
| BsrBI | CCGCTC | 2 cut(s) | 29, 2413 |
| BsrDI | GCAATG | 1 cut(s) | 473 |
| BsrFI | RCCGGY | 1 cut(s) | 1159 |
| BsrGI | TGTACA | 1 cut(s) | 1808 |
| BsrI | ACTGG | 5 cut(s) | 261, 1180, 3262, 3304, 3327 |
| BssAI | RCCGGY | 1 cut(s) | 1159 |
| BssECI | CCNNGG | 2 cut(s) | 197, 2299 |
| BssNI | GRCGYC | 2 cut(s) | 585, 2780 |
| BssT1I | CCWWGG | 1 cut(s) | 197 |
| Bst2UI | CCWGG | 2 cut(s) | 2070, 2301 |
| Bst6I | CTCTTC | 3 cut(s) | 909, 2649, 3069 |
| BstACI | GRCGYC | 2 cut(s) | 585, 2780 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 214 |
| BstAUI | TGTACA | 1 cut(s) | 1808 |
| BstBAI | YACGTR | 5 cut(s) | 191, 242, 1432, 1664, 3400 |
| BstC8I | GCNNGC | 9 cut(s) | 966, 1161, 2037, 2235, 2345, 2559, 2628, 2737, 2778 |
| BstF5I | GGATG | 7 cut(s) | 433, 808, 1281, 1909, 2708, 2816, 3350 |
| BstFNI | CGCG | 1 cut(s) | 2522 |
| BstH2I | RGCGCY | 2 cut(s) | 826, 2783 |
| BstHHI | GCGC | 6 cut(s) | 825, 1578, 1860, 2522, 2563, 2782 |
| BstMAI | GTCTC | 7 cut(s) | 1073, 1194, 2646, 2655, 3288, 3297, 3311 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 214, 220, 673, 1904, 1913, 2281, 2422, 2560 |
| BstNI | CCWGG | 2 cut(s) | 2070, 2301 |
| BstNSI | RCATGY | 4 cut(s) | 968, 1815, 1898, 2739 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2361 |
| BstSCI | CCNGG | 2 cut(s) | 2068, 2299 |
| BstSFI | CTRYAG | 4 cut(s) | 369, 1637, 2009, 2774 |
| BstSNI | TACGTA | 1 cut(s) | 3400 |
| BstUI | CGCG | 1 cut(s) | 2522 |
| BstV1I | GCAGC | 7 cut(s) | 201, 676, 1036, 2023, 2541, 3069, 3072 |
| BstV2I | GAAGAC | 6 cut(s) | 945, 1018, 1313, 1371, 1467, 1849 |
| BstX2I | RGATCY | 2 cut(s) | 988, 1285 |
| BstYI | RGATCY | 2 cut(s) | 988, 1285 |
| BsuI | GTATCC | 1 cut(s) | 2042 |
| BsuRI | GGCC | 5 cut(s) | 1038, 1280, 1916, 2233, 3337 |
| BtrI | CACGTC | 1 cut(s) | 3413 |
| BtsCI | GGATG | 7 cut(s) | 433, 808, 1281, 1909, 2708, 2816, 3350 |
| BtsI | GCAGTG | 3 cut(s) | 215, 1968, 2828 |
| BtsIMutI | CAGTG | 9 cut(s) | 215, 1646, 1945, 1968, 2616, 2828, 3269, 3297, 3320 |
| BveI | ACCTGC | 1 cut(s) | 2016 |
| Cac8I | GCNNGC | 9 cut(s) | 966, 1161, 2037, 2235, 2345, 2559, 2628, 2737, 2778 |
| CaiI | CAGNNNCTG | 2 cut(s) | 214, 2653 |
| CciI | TCATGA | 1 cut(s) | 523 |
| CfoI | GCGC | 6 cut(s) | 825, 1578, 1860, 2522, 2563, 2782 |
| Cfr10I | RCCGGY | 1 cut(s) | 1159 |
| Cfr13I | GGNCC | 3 cut(s) | 250, 2231, 3335 |
| CseI | GACGC | 1 cut(s) | 574 |
| Csp6I | GTAC | 7 cut(s) | 326, 900, 1183, 1613, 1720, 1809, 3397 |
| CviQI | GTAC | 7 cut(s) | 326, 900, 1183, 1613, 1720, 1809, 3397 |
| DinI | GGCGCC | 1 cut(s) | 2781 |
| DraI | TTTAAA | 4 cut(s) | 921, 2242, 2680, 3454 |
| EaeI | YGGCCR | 1 cut(s) | 1278 |
| Eam1104I | CTCTTC | 3 cut(s) | 909, 2649, 3069 |
| EarI | CTCTTC | 3 cut(s) | 909, 2649, 3069 |
| EciI | GGCGGA | 2 cut(s) | 301, 2337 |
| Eco105I | TACGTA | 1 cut(s) | 3400 |
| Eco130I | CCWWGG | 1 cut(s) | 197 |
| Eco147I | AGGCCT | 1 cut(s) | 1038 |
| Eco24I | GRGCYC | 1 cut(s) | 678 |
| Eco31I | GGTCTC | 1 cut(s) | 1073 |
| Eco32I | GATATC | 1 cut(s) | 1675 |
| Eco47I | GGWCC | 1 cut(s) | 250 |
| Eco57I | CTGAAG | 2 cut(s) | 525, 2630 |
| Eco88I | CYCGRG | 2 cut(s) | 678, 3173 |
| EcoO109I | RGGNCCY | 1 cut(s) | 250 |
| EcoRII | CCWGG | 2 cut(s) | 2068, 2299 |
| EcoRV | GATATC | 1 cut(s) | 1675 |
| EcoT14I | CCWWGG | 1 cut(s) | 197 |
| EcoT22I | ATGCAT | 3 cut(s) | 742, 1404, 1416 |
| EcoT38I | GRGCYC | 1 cut(s) | 678 |
| EgeI | GGCGCC | 1 cut(s) | 2781 |
| EheI | GGCGCC | 1 cut(s) | 2781 |
| ErhI | CCWWGG | 1 cut(s) | 197 |
| Esp3I | CGTCTC | 2 cut(s) | 2646, 3297 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 812, 844, 953, 985, 1322, 1354 |
| FaqI | GGGAC | 3 cut(s) | 1940, 2152, 2349 |
| FauI | CCCGC | 3 cut(s) | 805, 2268, 3241 |
| FauNDI | CATATG | 2 cut(s) | 1124, 3361 |
| FbaI | TGATCA | 1 cut(s) | 3369 |
| FblI | GTMKAC | 3 cut(s) | 372, 2992, 3409 |
| FokI | GGATG | 7 cut(s) | 440, 815, 1288, 1916, 2695, 2823, 3337 |
| FriOI | GRGCYC | 1 cut(s) | 678 |
| FspBI | CTAG | 2 cut(s) | 1817, 2000 |
| FspI | TGCGCA | 1 cut(s) | 1577 |
| GlaI | GCGC | 6 cut(s) | 824, 1577, 1859, 2521, 2562, 2781 |
| GsuI | CTGGAG | 9 cut(s) | 143, 858, 2270, 2322, 2874, 2971, 3191, 3321, 3344 |
| HaeII | RGCGCY | 2 cut(s) | 826, 2783 |
| HaeIII | GGCC | 5 cut(s) | 1038, 1280, 1916, 2233, 3337 |
| HapII | CCGG | 5 cut(s) | 1160, 1193, 1757, 2690, 2909 |
| HgaI | GACGC | 1 cut(s) | 574 |
| HhaI | GCGC | 6 cut(s) | 825, 1578, 1860, 2522, 2563, 2782 |
| Hin1I | GRCGYC | 2 cut(s) | 585, 2780 |
| Hin6I | GCGC | 6 cut(s) | 823, 1576, 1858, 2520, 2561, 2780 |
| HinP1I | GCGC | 6 cut(s) | 823, 1576, 1858, 2520, 2561, 2780 |
| HincII | GTYRAC | 2 cut(s) | 3028, 3410 |
| HindII | GTYRAC | 2 cut(s) | 3028, 3410 |
| HindIII | AAGCTT | 1 cut(s) | 221 |
| HpaII | CCGG | 5 cut(s) | 1160, 1193, 1757, 2690, 2909 |
| HphI | GGTGA | 6 cut(s) | 214, 856, 1976, 2318, 2995, 3364 |
| Hpy166II | GTNNAC | 4 cut(s) | 373, 2993, 3028, 3410 |
| Hpy8I | GTNNAC | 4 cut(s) | 373, 2993, 3028, 3410 |
| Hpy99I | CGWCG | 2 cut(s) | 3411, 3414 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 214, 220, 673, 1904, 1913, 2281, 2422, 2560 |
| Hsp92I | GRCGYC | 2 cut(s) | 585, 2780 |
| HspAI | GCGC | 6 cut(s) | 823, 1576, 1858, 2520, 2561, 2780 |
| KasI | GGCGCC | 1 cut(s) | 2779 |
| Kpn2I | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| KpnI | GGTACC | 1 cut(s) | 1723 |
| KroI | GCCGGC | 1 cut(s) | 1159 |
| KroNI | GCCGGC | 1 cut(s) | 1161 |
| Ksp22I | TGATCA | 1 cut(s) | 3369 |
| LmnI | GCTCC | 4 cut(s) | 23, 413, 839, 1195 |
| Lsp1109I | GCAGC | 7 cut(s) | 201, 676, 1036, 2023, 2541, 3069, 3072 |
| MaeI | CTAG | 2 cut(s) | 1817, 2000 |
| MbiI | CCGCTC | 2 cut(s) | 29, 2413 |
| MfeI | CAATTG | 2 cut(s) | 545, 3392 |
| MflI | RGATCY | 2 cut(s) | 988, 1285 |
| MhlI | GDGCHC | 1 cut(s) | 678 |
| Mly113I | GGCGCC | 1 cut(s) | 2780 |
| MlyI | GAGTC | 3 cut(s) | 374, 842, 2096 |
| MmeI | TCCRAC | 5 cut(s) | 45, 1296, 1306, 2137, 3162 |
| Mph1103I | ATGCAT | 3 cut(s) | 742, 1404, 1416 |
| MroI | TCCGGA | 3 cut(s) | 1192, 2689, 2908 |
| MroNI | GCCGGC | 1 cut(s) | 1159 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2904, 3066 |
| MslI | CAYNNNNRTG | 4 cut(s) | 688, 1432, 1631, 3283 |
| MspI | CCGG | 5 cut(s) | 1160, 1193, 1757, 2690, 2909 |
| MspR9I | CCNGG | 2 cut(s) | 2070, 2301 |
| MunI | CAATTG | 2 cut(s) | 545, 3392 |
| Mva1269I | GAATGC | 1 cut(s) | 2468 |
| MvaI | CCWGG | 2 cut(s) | 2070, 2301 |
| MvnI | CGCG | 1 cut(s) | 2522 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 214, 220, 673, 1904, 1913, 2281, 2422, 2560 |
| NaeI | GCCGGC | 1 cut(s) | 1161 |
| NarI | GGCGCC | 1 cut(s) | 2780 |
| NdeI | CATATG | 2 cut(s) | 1124, 3361 |
| NgoMIV | GCCGGC | 1 cut(s) | 1159 |
| NlaIV | GGNNCC | 5 cut(s) | 25, 1721, 2781, 3287, 3310 |
| NmeAIII | GCCGAG | 2 cut(s) | 199, 2018 |
| NmuCI | GTSAC | 9 cut(s) | 191, 455, 745, 862, 1118, 1964, 2498, 2826, 2937 |
| NsbI | TGCGCA | 1 cut(s) | 1577 |
| NsiI | ATGCAT | 3 cut(s) | 742, 1404, 1416 |
| NspI | RCATGY | 4 cut(s) | 968, 1815, 1898, 2739 |
| OliI | CACNNNNGTG | 1 cut(s) | 3283 |
| PaeI | GCATGC | 2 cut(s) | 968, 2739 |
| PaeR7I | CTCGAG | 1 cut(s) | 3173 |
| PagI | TCATGA | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 1038 |
| PciI | ACATGT | 1 cut(s) | 1811 |
| PctI | GAATGC | 1 cut(s) | 2468 |
| PdiI | GCCGGC | 1 cut(s) | 1161 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2904, 3066 |
| PleI | GAGTC | 3 cut(s) | 373, 841, 2095 |
| PluTI | GGCGCC | 1 cut(s) | 2783 |
| PpsI | GAGTC | 3 cut(s) | 373, 841, 2095 |
| Ppu21I | YACGTR | 5 cut(s) | 191, 242, 1432, 1664, 3400 |
| PpuMI | RGGWCCY | 1 cut(s) | 250 |
| PscI | ACATGT | 1 cut(s) | 1811 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2361 |
| PshBI | ATTAAT | 1 cut(s) | 1262 |
| PsiI | TTATAA | 2 cut(s) | 1242, 1539 |
| Psp1406I | AACGTT | 2 cut(s) | 448, 1790 |
| Psp5II | RGGWCCY | 1 cut(s) | 250 |
| Psp6I | CCWGG | 2 cut(s) | 2068, 2299 |
| PspGI | CCWGG | 2 cut(s) | 2068, 2299 |
| PspN4I | GGNNCC | 5 cut(s) | 25, 1721, 2781, 3287, 3310 |
| PspPI | GGNCC | 3 cut(s) | 250, 2231, 3335 |
| PspPPI | RGGWCCY | 1 cut(s) | 250 |
| PstI | CTGCAG | 2 cut(s) | 2013, 2778 |
| PstNI | CAGNNNCTG | 2 cut(s) | 214, 2653 |
| PsuI | RGATCY | 2 cut(s) | 988, 1285 |
| RsaI | GTAC | 7 cut(s) | 327, 901, 1184, 1614, 1721, 1810, 3398 |
| RsaNI | GTAC | 7 cut(s) | 326, 900, 1183, 1613, 1720, 1809, 3397 |
| RseI | CAYNNNNRTG | 4 cut(s) | 688, 1432, 1631, 3283 |
| SalI | GTCGAC | 1 cut(s) | 3408 |
| Sau96I | GGNCC | 3 cut(s) | 250, 2231, 3335 |
| ScaI | AGTACT | 1 cut(s) | 1184 |
| SchI | GAGTC | 3 cut(s) | 374, 842, 2096 |
| ScrFI | CCNGG | 2 cut(s) | 2070, 2301 |
| SduI | GDGCHC | 1 cut(s) | 678 |
| SfcI | CTRYAG | 4 cut(s) | 369, 1637, 2009, 2774 |
| SfoI | GGCGCC | 1 cut(s) | 2781 |
| Sfr274I | CTCGAG | 1 cut(s) | 3173 |
| SgrDI | CGTCGACG | 1 cut(s) | 3408 |
| SinI | GGWCC | 1 cut(s) | 250 |
| SlaI | CTCGAG | 1 cut(s) | 3173 |
| SmiI | ATTTAAAT | 2 cut(s) | 2680, 3454 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 688, 1432, 1631, 3283 |
| SmlI | CTYRAG | 8 cut(s) | 395, 797, 932, 998, 2117, 2408, 2503, 3173 |
| SmoI | CTYRAG | 8 cut(s) | 395, 797, 932, 998, 2117, 2408, 2503, 3173 |
| SnaBI | TACGTA | 1 cut(s) | 3400 |
| SphI | GCATGC | 2 cut(s) | 968, 2739 |
| SseBI | AGGCCT | 1 cut(s) | 1038 |
| SspDI | GGCGCC | 1 cut(s) | 2779 |
| SspI | AATATT | 2 cut(s) | 1520, 2479 |
| SspMI | CTAG | 2 cut(s) | 1817, 2000 |
| StuI | AGGCCT | 1 cut(s) | 1038 |
| StyD4I | CCNGG | 2 cut(s) | 2068, 2299 |
| StyI | CCWWGG | 1 cut(s) | 197 |
| SwaI | ATTTAAAT | 2 cut(s) | 2680, 3454 |
| TaqI | TCGA | 9 cut(s) | 138, 153, 831, 1725, 2439, 2943, 3060, 3174, 3409 |
| TatI | WGTACW | 3 cut(s) | 1182, 1612, 1808 |
| TauI | GCSGC | 3 cut(s) | 29, 2161, 2416 |
| TscAI | CASTG | 9 cut(s) | 215, 1646, 1945, 1975, 2616, 2835, 3269, 3304, 3327 |
| TseFI | GTSAC | 9 cut(s) | 191, 455, 745, 862, 1118, 1964, 2498, 2826, 2937 |
| TseI | GCWGC | 7 cut(s) | 214, 664, 1049, 2011, 2554, 3082, 3085 |
| Tsp45I | GTSAC | 9 cut(s) | 191, 455, 745, 862, 1118, 1964, 2498, 2826, 2937 |
| TspDTI | ATGAA | 8 cut(s) | 79, 717, 1384, 1512, 1573, 1575, 2866, 3237 |
| TspGWI | ACGGA | 3 cut(s) | 545, 2067, 2486 |
| TspRI | CASTG | 9 cut(s) | 215, 1646, 1945, 1975, 2616, 2835, 3269, 3304, 3327 |
| VpaK11BI | GGWCC | 1 cut(s) | 250 |
| VspI | ATTAAT | 1 cut(s) | 1262 |
| XceI | RCATGY | 4 cut(s) | 968, 1815, 1898, 2739 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 601, 3296, 3319 |
| XhoI | CTCGAG | 1 cut(s) | 3173 |
| XmiI | GTMKAC | 3 cut(s) | 372, 2992, 3409 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2904, 3066 |
| XspI | CTAG | 2 cut(s) | 1817, 2000 |
| ZrmI | AGTACT | 1 cut(s) | 1184 |
| Zsp2I | ATGCAT | 3 cut(s) | 742, 1404, 1416 |