Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 102 | 4.5e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 348 | 1.2e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 433 - 503 | 5.8e-26 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 535 - 620 | 2e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 572 - 864 | 1.1e-28 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 687 - 814 | 4.7e-40 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1037 |
| Acc16I | TGCGCA | 1 cut(s) | 2127 |
| Acc36I | ACCTGC | 1 cut(s) | 1037 |
| Acc65I | GGTACC | 1 cut(s) | 965 |
| AccB1I | GGYRCC | 1 cut(s) | 965 |
| AccI | GTMKAC | 3 cut(s) | 2823, 2878, 2913 |
| AccII | CGCG | 2 cut(s) | 1887, 2091 |
| AclI | AACGTT | 1 cut(s) | 3154 |
| AclWI | GGATC | 2 cut(s) | 885, 2769 |
| AcsI | RAATTY | 3 cut(s) | 710, 827, 2641 |
| AcuI | CTGAAG | 7 cut(s) | 294, 1292, 1374, 1706, 1736, 2063, 2382 |
| AfaI | GTAC | 6 cut(s) | 333, 650, 967, 1449, 1752, 1855 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 605, 1991, 2157, 2560, 2750, 2801, 2957, 3095 |
| AflII | CTTAAG | 1 cut(s) | 883 |
| AflIII | ACRYGT | 2 cut(s) | 935, 1444 |
| AjiI | CACGTC | 2 cut(s) | 938, 2242 |
| AjnI | CCWGG | 2 cut(s) | 383, 2314 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2156, 2188 |
| Alw21I | GWGCWC | 1 cut(s) | 1740 |
| Alw26I | GTCTC | 6 cut(s) | 803, 1522, 1821, 2141, 2232, 3161 |
| AlwI | GGATC | 2 cut(s) | 885, 2769 |
| Ama87I | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| AoxI | GGCC | 2 cut(s) | 540, 3182 |
| ApeKI | GCWGC | 8 cut(s) | 118, 315, 1121, 1768, 2407, 2841, 2962, 2965 |
| ApoI | RAATTY | 3 cut(s) | 710, 827, 2641 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2355, 2387 |
| AseI | ATTAAT | 1 cut(s) | 1931 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2583, 2790 |
| Asp718I | GGTACC | 1 cut(s) | 965 |
| AspLEI | GCGC | 6 cut(s) | 1887, 1889, 2091, 2128, 2677, 2841 |
| AspS9I | GGNCC | 1 cut(s) | 3183 |
| AsuC2I | CCSGG | 1 cut(s) | 2515 |
| AsuHPI | GGTGA | 5 cut(s) | 1775, 2222, 2467, 2881, 3028 |
| AsuII | TTCGAA | 2 cut(s) | 3005, 3222 |
| AvaI | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 323, 356 |
| BanI | GGYRCC | 1 cut(s) | 965 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1347, 1379, 2568, 2600 |
| BauI | CACGAG | 1 cut(s) | 644 |
| BbsI | GAAGAC | 4 cut(s) | 110, 484, 1385, 2693 |
| Bbv12I | GWGCWC | 1 cut(s) | 1740 |
| BbvI | GCAGC | 8 cut(s) | 105, 327, 1108, 1755, 2419, 2828, 2949, 2952 |
| BccI | CCATC | 8 cut(s) | 58, 286, 560, 690, 1342, 1984, 2654, 2752 |
| BceAI | ACGGC | 2 cut(s) | 2794, 3031 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1047, 1081 |
| BciT130I | CCWGG | 2 cut(s) | 385, 2316 |
| BclI | TGATCA | 1 cut(s) | 1618 |
| BcnI | CCSGG | 1 cut(s) | 2515 |
| BcoDI | GTCTC | 6 cut(s) | 803, 1522, 1821, 2141, 2232, 3161 |
| BfaI | CTAG | 8 cut(s) | 198, 1208, 1421, 1664, 1901, 2036, 2337, 3146 |
| BfmI | CTRYAG | 2 cut(s) | 1056, 2595 |
| BfoI | RGCGCY | 1 cut(s) | 2842 |
| BfrI | CTTAAG | 1 cut(s) | 883 |
| BfuAI | ACCTGC | 1 cut(s) | 1037 |
| BglII | AGATCT | 4 cut(s) | 1060, 1357, 2005, 2329 |
| Bme1390I | CCNGG | 3 cut(s) | 385, 2316, 2515 |
| BmeT110I | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| BmgBI | CACGTC | 2 cut(s) | 938, 2242 |
| BmgT120I | GGNCC | 1 cut(s) | 3183 |
| BmiI | GGNNCC | 2 cut(s) | 381, 967 |
| BmrFI | CCNGG | 3 cut(s) | 385, 2316, 2515 |
| BmsI | GCATC | 7 cut(s) | 160, 1591, 1613, 1804, 1968, 2112, 2128 |
| BoxI | GACNNNNGTC | 2 cut(s) | 372, 2809 |
| BpiI | GAAGAC | 4 cut(s) | 110, 484, 1385, 2693 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 2 cut(s) | 1542, 2267 |
| Bpu14I | TTCGAA | 2 cut(s) | 3005, 3222 |
| BpuEI | CTTGAG | 3 cut(s) | 1290, 2450, 2938 |
| BpuMI | CCSGG | 1 cut(s) | 2515 |
| BsaI | GGTCTC | 1 cut(s) | 2141 |
| BsaJI | CCNNGG | 7 cut(s) | 94, 383, 1985, 2142, 2505, 2514, 2691 |
| BsaWI | WCCGGW | 2 cut(s) | 76, 3078 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 800, 830, 2403, 2433 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 605, 1991, 2157, 2560, 2750, 2801, 2957, 3095 |
| Bse1I | ACTGG | 5 cut(s) | 510, 580, 1338, 2053, 2787 |
| Bse3DI | GCAATG | 1 cut(s) | 2714 |
| BseBI | CCWGG | 2 cut(s) | 385, 2316 |
| BseDI | CCNNGG | 7 cut(s) | 94, 383, 1985, 2142, 2505, 2514, 2691 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 605, 1991, 2157, 2560, 2750, 2801, 2957, 3095 |
| BseMI | GCAATG | 1 cut(s) | 2714 |
| BseMII | CTCAG | 4 cut(s) | 202, 210, 990, 2699 |
| BseNI | ACTGG | 5 cut(s) | 510, 580, 1338, 2053, 2787 |
| BsePI | GCGCGC | 1 cut(s) | 1885 |
| BseRI | GAGGAG | 1 cut(s) | 191 |
| BseXI | GCAGC | 8 cut(s) | 105, 327, 1108, 1755, 2419, 2828, 2949, 2952 |
| Bsh1236I | CGCG | 2 cut(s) | 1887, 2091 |
| BshFI | GGCC | 2 cut(s) | 542, 3184 |
| BshNI | GGYRCC | 1 cut(s) | 965 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1740 |
| BsiHKCI | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| BsiSI | CCGG | 3 cut(s) | 77, 2514, 3079 |
| BslFI | GGGAC | 4 cut(s) | 1640, 1674, 2487, 2817 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 605, 1991, 2157, 2560, 2750, 2801, 2957, 3095 |
| BsmAI | GTCTC | 6 cut(s) | 803, 1522, 1821, 2141, 2232, 3161 |
| BsmBI | CGTCTC | 2 cut(s) | 803, 2232 |
| BsmFI | GGGAC | 4 cut(s) | 1640, 1674, 2487, 2817 |
| BsmI | GAATGC | 3 cut(s) | 1048, 2519, 2677 |
| BsnI | GGCC | 2 cut(s) | 542, 3184 |
| Bso31I | GGTCTC | 1 cut(s) | 2141 |
| BsoBI | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| Bsp119I | TTCGAA | 2 cut(s) | 3005, 3222 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1740 |
| Bsp1407I | TGTACA | 1 cut(s) | 648 |
| Bsp19I | CCATGG | 1 cut(s) | 2691 |
| BspANI | GGCC | 2 cut(s) | 542, 3184 |
| BspCNI | CTCAG | 4 cut(s) | 201, 211, 991, 2700 |
| BspFNI | CGCG | 2 cut(s) | 1887, 2091 |
| BspHI | TCATGA | 2 cut(s) | 358, 940 |
| BspLI | GGNNCC | 2 cut(s) | 381, 967 |
| BspMAI | CTGCAG | 1 cut(s) | 1060 |
| BspMI | ACCTGC | 1 cut(s) | 1037 |
| BspPI | GGATC | 2 cut(s) | 885, 2769 |
| BspT104I | TTCGAA | 2 cut(s) | 3005, 3222 |
| BspT107I | GGYRCC | 1 cut(s) | 965 |
| BspTI | CTTAAG | 1 cut(s) | 883 |
| BspTNI | GGTCTC | 1 cut(s) | 2141 |
| BsrDI | GCAATG | 1 cut(s) | 2714 |
| BsrGI | TGTACA | 1 cut(s) | 648 |
| BsrI | ACTGG | 5 cut(s) | 510, 580, 1338, 2053, 2787 |
| BssECI | CCNNGG | 7 cut(s) | 94, 383, 1985, 2142, 2505, 2514, 2691 |
| BssHII | GCGCGC | 1 cut(s) | 1885 |
| BssSI | CACGAG | 1 cut(s) | 644 |
| BssT1I | CCWWGG | 3 cut(s) | 1985, 2142, 2691 |
| Bst2BI | CACGAG | 1 cut(s) | 644 |
| Bst2UI | CCWGG | 2 cut(s) | 385, 2316 |
| Bst4CI | ACNGT | 8 cut(s) | 421, 859, 1292, 1368, 1631, 2461, 2599, 2864 |
| Bst6I | CTCTTC | 3 cut(s) | 40, 498, 2589 |
| BstAFI | CTTAAG | 1 cut(s) | 883 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2728 |
| BstAUI | TGTACA | 1 cut(s) | 648 |
| BstBI | TTCGAA | 2 cut(s) | 3005, 3222 |
| BstC8I | GCNNGC | 4 cut(s) | 955, 1233, 1887, 3086 |
| BstDEI | CTNAG | 9 cut(s) | 188, 219, 999, 1504, 1696, 1799, 2469, 2708, 2814 |
| BstDSI | CCRYGG | 1 cut(s) | 2691 |
| BstEII | GGTNACC | 1 cut(s) | 2509 |
| BstFNI | CGCG | 2 cut(s) | 1887, 2091 |
| BstH2I | RGCGCY | 1 cut(s) | 2842 |
| BstHHI | GCGC | 6 cut(s) | 1887, 1889, 2091, 2128, 2677, 2841 |
| BstMAI | GTCTC | 6 cut(s) | 803, 1522, 1821, 2141, 2232, 3161 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 220, 1581, 1610, 1801, 2674, 2728 |
| BstNI | CCWGG | 2 cut(s) | 385, 2316 |
| BstNSI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2132, 2731 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 372, 2809 |
| BstPI | GGTNACC | 1 cut(s) | 2509 |
| BstSCI | CCNGG | 3 cut(s) | 383, 2314, 2513 |
| BstSFI | CTRYAG | 2 cut(s) | 1056, 2595 |
| BstUI | CGCG | 2 cut(s) | 1887, 2091 |
| BstV1I | GCAGC | 8 cut(s) | 105, 327, 1108, 1755, 2419, 2828, 2949, 2952 |
| BstV2I | GAAGAC | 4 cut(s) | 110, 484, 1385, 2693 |
| BstX2I | RGATCY | 6 cut(s) | 877, 1060, 1357, 2005, 2329, 2761 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 391, 1239 |
| BstYI | RGATCY | 6 cut(s) | 877, 1060, 1357, 2005, 2329, 2761 |
| BsuRI | GGCC | 2 cut(s) | 542, 3184 |
| BtgI | CCRYGG | 1 cut(s) | 2691 |
| BtrI | CACGTC | 2 cut(s) | 938, 2242 |
| BtsI | GCAGTG | 1 cut(s) | 2876 |
| BtsIMutI | CAGTG | 4 cut(s) | 517, 1730, 2046, 2876 |
| BveI | ACCTGC | 1 cut(s) | 1037 |
| Cac8I | GCNNGC | 4 cut(s) | 955, 1233, 1887, 3086 |
| CciI | TCATGA | 2 cut(s) | 358, 940 |
| CfoI | GCGC | 6 cut(s) | 1887, 1889, 2091, 2128, 2677, 2841 |
| Cfr13I | GGNCC | 1 cut(s) | 3183 |
| CseI | GACGC | 2 cut(s) | 1676, 1931 |
| Csp6I | GTAC | 6 cut(s) | 332, 649, 966, 1448, 1751, 1854 |
| CviQI | GTAC | 6 cut(s) | 332, 649, 966, 1448, 1751, 1854 |
| DdeI | CTNAG | 9 cut(s) | 188, 219, 999, 1504, 1696, 1799, 2469, 2708, 2814 |
| Eam1104I | CTCTTC | 3 cut(s) | 40, 498, 2589 |
| EarI | CTCTTC | 3 cut(s) | 40, 498, 2589 |
| Eco130I | CCWWGG | 3 cut(s) | 1985, 2142, 2691 |
| Eco31I | GGTCTC | 1 cut(s) | 2141 |
| Eco57I | CTGAAG | 7 cut(s) | 294, 1292, 1374, 1706, 1736, 2063, 2382 |
| Eco88I | CYCGRG | 4 cut(s) | 335, 2107, 2282, 2504 |
| Eco91I | GGTNACC | 1 cut(s) | 2509 |
| EcoO65I | GGTNACC | 1 cut(s) | 2509 |
| EcoRII | CCWGG | 2 cut(s) | 383, 2314 |
| EcoT14I | CCWWGG | 3 cut(s) | 1985, 2142, 2691 |
| EcoT22I | ATGCAT | 3 cut(s) | 1488, 1606, 2105 |
| ErhI | CCWWGG | 3 cut(s) | 1985, 2142, 2691 |
| Esp3I | CGTCTC | 2 cut(s) | 803, 2232 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 423, 455 |
| FaqI | GGGAC | 4 cut(s) | 1640, 1674, 2487, 2817 |
| FauNDI | CATATG | 1 cut(s) | 1196 |
| FbaI | TGATCA | 1 cut(s) | 1618 |
| FblI | GTMKAC | 3 cut(s) | 2823, 2878, 2913 |
| FspBI | CTAG | 8 cut(s) | 198, 1208, 1421, 1664, 1901, 2036, 2337, 3146 |
| FspI | TGCGCA | 1 cut(s) | 2127 |
| GlaI | GCGC | 6 cut(s) | 1886, 1888, 2090, 2127, 2676, 2840 |
| GsuI | CTGGAG | 2 cut(s) | 1542, 2267 |
| HaeII | RGCGCY | 1 cut(s) | 2842 |
| HaeIII | GGCC | 2 cut(s) | 542, 3184 |
| HapII | CCGG | 3 cut(s) | 77, 2514, 3079 |
| HgaI | GACGC | 2 cut(s) | 1676, 1931 |
| HhaI | GCGC | 6 cut(s) | 1887, 1889, 2091, 2128, 2677, 2841 |
| Hin6I | GCGC | 6 cut(s) | 1885, 1887, 2089, 2126, 2675, 2839 |
| HinP1I | GCGC | 6 cut(s) | 1885, 1887, 2089, 2126, 2675, 2839 |
| HincII | GTYRAC | 4 cut(s) | 85, 424, 980, 2914 |
| HindII | GTYRAC | 4 cut(s) | 85, 424, 980, 2914 |
| HindIII | AAGCTT | 1 cut(s) | 1718 |
| HpaII | CCGG | 3 cut(s) | 77, 2514, 3079 |
| HphI | GGTGA | 5 cut(s) | 1775, 2222, 2467, 2881, 3028 |
| Hpy99I | CGWCG | 2 cut(s) | 1372, 2222 |
| HpyAV | CCTTC | 7 cut(s) | 516, 980, 1045, 2406, 2432, 2792, 3089 |
| HpyCH4III | ACNGT | 8 cut(s) | 421, 859, 1292, 1368, 1631, 2461, 2599, 2864 |
| HpyCH4IV | ACGT | 7 cut(s) | 812, 937, 1147, 1557, 1874, 2241, 3154 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 220, 1581, 1610, 1801, 2674, 2728 |
| HpyF3I | CTNAG | 9 cut(s) | 188, 219, 999, 1504, 1696, 1799, 2469, 2708, 2814 |
| HpySE526I | ACGT | 7 cut(s) | 812, 937, 1147, 1557, 1874, 2241, 3154 |
| HspAI | GCGC | 6 cut(s) | 1885, 1887, 2089, 2126, 2675, 2839 |
| KpnI | GGTACC | 1 cut(s) | 969 |
| Ksp22I | TGATCA | 1 cut(s) | 1618 |
| LmnI | GCTCC | 3 cut(s) | 23, 126, 312 |
| Lsp1109I | GCAGC | 8 cut(s) | 105, 327, 1108, 1755, 2419, 2828, 2949, 2952 |
| LweI | GCATC | 7 cut(s) | 160, 1591, 1613, 1804, 1968, 2112, 2128 |
| MaeI | CTAG | 8 cut(s) | 198, 1208, 1421, 1664, 1901, 2036, 2337, 3146 |
| MaeII | ACGT | 7 cut(s) | 812, 937, 1147, 1557, 1874, 2241, 3154 |
| MfeI | CAATTG | 3 cut(s) | 600, 1614, 3064 |
| MflI | RGATCY | 6 cut(s) | 877, 1060, 1357, 2005, 2329, 2761 |
| MhlI | GDGCHC | 1 cut(s) | 1740 |
| MlyI | GAGTC | 7 cut(s) | 210, 515, 672, 1104, 1588, 2613, 2979 |
| MmeI | TCCRAC | 5 cut(s) | 1378, 1521, 2281, 2304, 2641 |
| Mph1103I | ATGCAT | 3 cut(s) | 1488, 1606, 2105 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2583, 2790 |
| MslI | CAYNNNNRTG | 2 cut(s) | 246, 945 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspCI | CTTAAG | 1 cut(s) | 883 |
| MspI | CCGG | 3 cut(s) | 77, 2514, 3079 |
| MspR9I | CCNGG | 3 cut(s) | 385, 2316, 2515 |
| MunI | CAATTG | 3 cut(s) | 600, 1614, 3064 |
| Mva1269I | GAATGC | 3 cut(s) | 1048, 2519, 2677 |
| MvaI | CCWGG | 2 cut(s) | 385, 2316 |
| MvnI | CGCG | 2 cut(s) | 1887, 2091 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 220, 1581, 1610, 1801, 2674, 2728 |
| NciI | CCSGG | 1 cut(s) | 2515 |
| NcoI | CCATGG | 1 cut(s) | 2691 |
| NdeI | CATATG | 1 cut(s) | 1196 |
| NlaIV | GGNNCC | 2 cut(s) | 381, 967 |
| NmeAIII | GCCGAG | 1 cut(s) | 2730 |
| NmuCI | GTSAC | 6 cut(s) | 751, 859, 928, 2131, 2210, 2455 |
| NsbI | TGCGCA | 1 cut(s) | 2127 |
| NsiI | ATGCAT | 3 cut(s) | 1488, 1606, 2105 |
| NspI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2132, 2731 |
| NspV | TTCGAA | 2 cut(s) | 3005, 3222 |
| PaeR7I | CTCGAG | 2 cut(s) | 335, 2282 |
| PagI | TCATGA | 2 cut(s) | 358, 940 |
| PaqCI | CACCTGC | 1 cut(s) | 1037 |
| PauI | GCGCGC | 1 cut(s) | 1885 |
| PciI | ACATGT | 1 cut(s) | 1444 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 651, 2553 |
| PctI | GAATGC | 3 cut(s) | 1048, 2519, 2677 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2583, 2790 |
| PfeI | GAWTC | 7 cut(s) | 305, 388, 1267, 2287, 2579, 2786, 2942 |
| PflFI | GACNNNGTC | 2 cut(s) | 662, 814 |
| PleI | GAGTC | 7 cut(s) | 209, 514, 671, 1104, 1587, 2613, 2979 |
| PpsI | GAGTC | 7 cut(s) | 209, 514, 671, 1104, 1587, 2613, 2979 |
| PscI | ACATGT | 1 cut(s) | 1444 |
| PshAI | GACNNNNGTC | 2 cut(s) | 372, 2809 |
| PshBI | ATTAAT | 1 cut(s) | 1931 |
| Psp1406I | AACGTT | 1 cut(s) | 3154 |
| Psp6I | CCWGG | 2 cut(s) | 383, 2314 |
| PspEI | GGTNACC | 1 cut(s) | 2509 |
| PspGI | CCWGG | 2 cut(s) | 383, 2314 |
| PspN4I | GGNNCC | 2 cut(s) | 381, 967 |
| PspPI | GGNCC | 1 cut(s) | 3183 |
| PspXI | VCTCGAGB | 1 cut(s) | 335 |
| PstI | CTGCAG | 1 cut(s) | 1060 |
| PsuI | RGATCY | 6 cut(s) | 877, 1060, 1357, 2005, 2329, 2761 |
| PsyI | GACNNNGTC | 2 cut(s) | 662, 814 |
| PteI | GCGCGC | 1 cut(s) | 1885 |
| RsaI | GTAC | 6 cut(s) | 333, 650, 967, 1449, 1752, 1855 |
| RsaNI | GTAC | 6 cut(s) | 332, 649, 966, 1448, 1751, 1854 |
| RseI | CAYNNNNRTG | 2 cut(s) | 246, 945 |
| SalI | GTCGAC | 1 cut(s) | 2912 |
| Sau96I | GGNCC | 1 cut(s) | 3183 |
| SchI | GAGTC | 7 cut(s) | 210, 515, 672, 1104, 1588, 2613, 2979 |
| ScrFI | CCNGG | 3 cut(s) | 385, 2316, 2515 |
| SduI | GDGCHC | 1 cut(s) | 1740 |
| SfaNI | GCATC | 7 cut(s) | 160, 1591, 1613, 1804, 1968, 2112, 2128 |
| SfcI | CTRYAG | 2 cut(s) | 1056, 2595 |
| Sfr274I | CTCGAG | 2 cut(s) | 335, 2282 |
| SfuI | TTCGAA | 2 cut(s) | 3005, 3222 |
| SlaI | CTCGAG | 2 cut(s) | 335, 2282 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 246, 945 |
| SmlI | CTYRAG | 6 cut(s) | 335, 883, 1305, 2282, 2429, 2917 |
| SmoI | CTYRAG | 6 cut(s) | 335, 883, 1305, 2282, 2429, 2917 |
| SspI | AATATT | 2 cut(s) | 1162, 2122 |
| SspMI | CTAG | 8 cut(s) | 198, 1208, 1421, 1664, 1901, 2036, 2337, 3146 |
| StyD4I | CCNGG | 3 cut(s) | 383, 2314, 2513 |
| StyI | CCWWGG | 3 cut(s) | 1985, 2142, 2691 |
| TaaI | ACNGT | 8 cut(s) | 421, 859, 1292, 1368, 1631, 2461, 2599, 2864 |
| TaiI | ACGT | 7 cut(s) | 815, 940, 1150, 1560, 1877, 2244, 3157 |
| TatI | WGTACW | 3 cut(s) | 648, 1750, 1853 |
| TauI | GCSGC | 5 cut(s) | 113, 321, 1613, 2304, 2722 |
| TfiI | GAWTC | 7 cut(s) | 305, 388, 1267, 2287, 2579, 2786, 2942 |
| TscAI | CASTG | 4 cut(s) | 517, 1730, 2053, 2876 |
| TseFI | GTSAC | 6 cut(s) | 751, 859, 928, 2131, 2210, 2455 |
| TseI | GCWGC | 8 cut(s) | 118, 315, 1121, 1768, 2407, 2841, 2962, 2965 |
| Tsp45I | GTSAC | 6 cut(s) | 751, 859, 928, 2131, 2210, 2455 |
| TspRI | CASTG | 4 cut(s) | 517, 1730, 2053, 2876 |
| Tth111I | GACNNNGTC | 2 cut(s) | 662, 814 |
| Vha464I | CTTAAG | 1 cut(s) | 883 |
| VspI | ATTAAT | 1 cut(s) | 1931 |
| XapI | RAATTY | 3 cut(s) | 710, 827, 2641 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 5 cut(s) | 790, 1034, 1448, 2132, 2731 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 493 |
| XhoI | CTCGAG | 2 cut(s) | 335, 2282 |
| XmiI | GTMKAC | 3 cut(s) | 2823, 2878, 2913 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2583, 2790 |
| XspI | CTAG | 8 cut(s) | 198, 1208, 1421, 1664, 1901, 2036, 2337, 3146 |
| Zsp2I | ATGCAT | 3 cut(s) | 1488, 1606, 2105 |