Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 104 | 1.6e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 179 - 351 | 3.1e-40 | NB-ARC domain |
| WHD_DRP | PF23559 | 435 - 505 | 1.7e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 580 - 881 | 6.9e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 699 - 822 | 2.4e-39 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 1670, 2897 |
| Acc36I | ACCTGC | 1 cut(s) | 3139 |
| Acc65I | GGTACC | 1 cut(s) | 3327 |
| AccB1I | GGYRCC | 1 cut(s) | 3327 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2923 |
| AccI | GTMKAC | 1 cut(s) | 657 |
| AccII | CGCG | 2 cut(s) | 698, 2127 |
| AccIII | TCCGGA | 1 cut(s) | 2941 |
| AciI | CCGC | 5 cut(s) | 2021, 2127, 2563, 2641, 3028 |
| AclI | AACGTT | 1 cut(s) | 1282 |
| AclWI | GGATC | 2 cut(s) | 1061, 3419 |
| AcoI | YGGCCR | 1 cut(s) | 1356 |
| AcsI | RAATTY | 7 cut(s) | 302, 335, 422, 719, 1637, 2549, 2797 |
| AcuI | CTGAAG | 1 cut(s) | 267 |
| AfaI | GTAC | 7 cut(s) | 1607, 1790, 1891, 1999, 2332, 2355, 3329 |
| AflII | CTTAAG | 1 cut(s) | 892 |
| AflIII | ACRYGT | 4 cut(s) | 696, 1039, 1848, 2778 |
| AhlI | ACTAGT | 1 cut(s) | 2218 |
| AjnI | CCWGG | 1 cut(s) | 919 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 288, 320 |
| AleI | CACNNNNGTG | 1 cut(s) | 2738 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2751, 2783 |
| Alw21I | GWGCWC | 1 cut(s) | 3207 |
| Alw26I | GTCTC | 7 cut(s) | 409, 542, 1151, 1217, 2173, 2485, 3063 |
| AlwI | GGATC | 2 cut(s) | 1061, 3419 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 920 |
| Ama87I | CYCGRG | 1 cut(s) | 72 |
| Aor13HI | TCCGGA | 1 cut(s) | 2941 |
| AoxI | GGCC | 4 cut(s) | 1114, 1356, 3121, 3353 |
| ApeKI | GCWGC | 7 cut(s) | 679, 914, 1127, 1747, 2078, 2824, 3247 |
| ApoI | RAATTY | 7 cut(s) | 302, 335, 422, 719, 1637, 2549, 2797 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1508, 1540 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 836, 839 |
| Asp718I | GGTACC | 1 cut(s) | 3327 |
| AspLEI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2833, 2898 |
| AspS9I | GGNCC | 3 cut(s) | 2489, 2877, 3354 |
| AsuC2I | CCSGG | 1 cut(s) | 2342 |
| AsuHPI | GGTGA | 8 cut(s) | 100, 424, 980, 1463, 1477, 1594, 1634, 3199 |
| AsuII | TTCGAA | 1 cut(s) | 2553 |
| AvaI | CYCGRG | 1 cut(s) | 72 |
| AvaII | GGWCC | 2 cut(s) | 2489, 2877 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3311, 3344 |
| BanI | GGYRCC | 1 cut(s) | 3327 |
| BanII | GRGCYC | 1 cut(s) | 3207 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3111, 3143 |
| BauI | CACGAG | 1 cut(s) | 3053 |
| BbsI | GAAGAC | 4 cut(s) | 255, 519, 641, 1036 |
| Bbv12I | GWGCWC | 1 cut(s) | 3207 |
| BbvI | GCAGC | 7 cut(s) | 691, 926, 1114, 1734, 2065, 2811, 3234 |
| BccI | CCATC | 8 cut(s) | 964, 999, 1348, 1619, 1989, 2983, 3161, 3383 |
| BciT130I | CCWGG | 1 cut(s) | 921 |
| BciVI | GTATCC | 1 cut(s) | 1725 |
| BclI | TGATCA | 1 cut(s) | 1468 |
| BcnI | CCSGG | 1 cut(s) | 2342 |
| BcoDI | GTCTC | 7 cut(s) | 409, 542, 1151, 1217, 2173, 2485, 3063 |
| BcuI | ACTAGT | 1 cut(s) | 2218 |
| BfaI | CTAG | 5 cut(s) | 419, 2219, 2426, 3074, 3293 |
| BfmI | CTRYAG | 5 cut(s) | 912, 1392, 2079, 2114, 3248 |
| BfrI | CTTAAG | 1 cut(s) | 892 |
| BfuAI | ACCTGC | 1 cut(s) | 3139 |
| BfuI | GTATCC | 1 cut(s) | 1725 |
| BglII | AGATCT | 3 cut(s) | 1363, 2041, 3297 |
| BisI | GCNGC | 7 cut(s) | 680, 915, 1128, 1748, 2079, 2825, 3248 |
| BlpI | GCTNAGC | 2 cut(s) | 648, 1659 |
| BlsI | GCNGC | 7 cut(s) | 681, 916, 1129, 1749, 2080, 2826, 3249 |
| Bme1390I | CCNGG | 2 cut(s) | 921, 2342 |
| Bme18I | GGWCC | 2 cut(s) | 2489, 2877 |
| BmeT110I | CYCGRG | 1 cut(s) | 72 |
| BmgT120I | GGNCC | 3 cut(s) | 2489, 2877, 3354 |
| BmiI | GGNNCC | 1 cut(s) | 3329 |
| BmrFI | CCNGG | 2 cut(s) | 921, 2342 |
| BmrI | ACTGGG | 2 cut(s) | 2670, 2808 |
| BmsI | GCATC | 8 cut(s) | 160, 232, 877, 971, 1645, 2004, 2883, 3227 |
| BmuI | ACTGGG | 2 cut(s) | 2670, 2808 |
| BoxI | GACNNNNGTC | 2 cut(s) | 519, 3055 |
| BpiI | GAAGAC | 4 cut(s) | 255, 519, 641, 1036 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 15, 47, 1576, 1608, 3194, 3226 |
| BpmI | CTGGAG | 3 cut(s) | 1548, 1568, 2900 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3243 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 648, 1659 |
| Bpu14I | TTCGAA | 1 cut(s) | 2553 |
| BpuEI | CTTGAG | 3 cut(s) | 65, 797, 1417 |
| BpuMI | CCSGG | 1 cut(s) | 2342 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1071, 2852, 2974 |
| BsaI | GGTCTC | 1 cut(s) | 2485 |
| BsaJI | CCNNGG | 3 cut(s) | 94, 111, 359 |
| BsaWI | WCCGGW | 2 cut(s) | 2884, 2941 |
| Bse1I | ACTGG | 5 cut(s) | 1883, 2665, 2814, 2917, 3356 |
| Bse3DI | GCAATG | 4 cut(s) | 955, 1569, 1766, 3018 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1071, 2852, 2974 |
| BseAI | TCCGGA | 1 cut(s) | 2941 |
| BseBI | CCWGG | 1 cut(s) | 921 |
| BseDI | CCNNGG | 3 cut(s) | 94, 111, 359 |
| BseGI | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BseJI | GATNNNNATC | 3 cut(s) | 1071, 2852, 2974 |
| BseMI | GCAATG | 4 cut(s) | 955, 1569, 1766, 3018 |
| BseMII | CTCAG | 7 cut(s) | 662, 999, 1314, 2435, 2484, 2864, 3234 |
| BseNI | ACTGG | 5 cut(s) | 1883, 2665, 2814, 2917, 3356 |
| BseRI | GAGGAG | 4 cut(s) | 191, 1025, 1418, 2622 |
| BseXI | GCAGC | 7 cut(s) | 691, 926, 1114, 1734, 2065, 2811, 3234 |
| BsgI | GTGCAG | 1 cut(s) | 1692 |
| Bsh1236I | CGCG | 2 cut(s) | 698, 2127 |
| BshFI | GGCC | 4 cut(s) | 1116, 1358, 3123, 3355 |
| BshNI | GGYRCC | 1 cut(s) | 3327 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3207 |
| BsiHKCI | CYCGRG | 1 cut(s) | 72 |
| BsiSI | CCGG | 3 cut(s) | 2342, 2885, 2942 |
| BslFI | GGGAC | 2 cut(s) | 1475, 2210 |
| BsmAI | GTCTC | 7 cut(s) | 409, 542, 1151, 1217, 2173, 2485, 3063 |
| BsmBI | CGTCTC | 1 cut(s) | 542 |
| BsmFI | GGGAC | 2 cut(s) | 1475, 2210 |
| BsnI | GGCC | 4 cut(s) | 1116, 1358, 3123, 3355 |
| Bso31I | GGTCTC | 1 cut(s) | 2485 |
| BsoBI | CYCGRG | 1 cut(s) | 72 |
| Bsp119I | TTCGAA | 1 cut(s) | 2553 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3207 |
| Bsp13I | TCCGGA | 1 cut(s) | 2941 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 648, 1659 |
| BspACI | CCGC | 5 cut(s) | 2021, 2127, 2563, 2641, 3028 |
| BspANI | GGCC | 4 cut(s) | 1116, 1358, 3123, 3355 |
| BspCNI | CTCAG | 7 cut(s) | 661, 1000, 1313, 2436, 2485, 2865, 3235 |
| BspEI | TCCGGA | 1 cut(s) | 2941 |
| BspFNI | CGCG | 2 cut(s) | 698, 2127 |
| BspHI | TCATGA | 3 cut(s) | 2089, 2310, 2626 |
| BspLI | GGNNCC | 1 cut(s) | 3329 |
| BspMAI | CTGCAG | 4 cut(s) | 916, 1396, 2083, 3252 |
| BspMI | ACCTGC | 1 cut(s) | 3139 |
| BspPI | GGATC | 2 cut(s) | 1061, 3419 |
| BspT104I | TTCGAA | 1 cut(s) | 2553 |
| BspT107I | GGYRCC | 1 cut(s) | 3327 |
| BspTI | CTTAAG | 1 cut(s) | 892 |
| BspTNI | GGTCTC | 1 cut(s) | 2485 |
| BsrDI | GCAATG | 4 cut(s) | 955, 1569, 1766, 3018 |
| BsrI | ACTGG | 5 cut(s) | 1883, 2665, 2814, 2917, 3356 |
| BssECI | CCNNGG | 3 cut(s) | 94, 111, 359 |
| BssNAI | GTATAC | 1 cut(s) | 658 |
| BssSI | CACGAG | 1 cut(s) | 3053 |
| BssT1I | CCWWGG | 2 cut(s) | 94, 359 |
| Bst1107I | GTATAC | 1 cut(s) | 658 |
| Bst2BI | CACGAG | 1 cut(s) | 3053 |
| Bst2UI | CCWGG | 1 cut(s) | 921 |
| Bst4CI | ACNGT | 8 cut(s) | 878, 1556, 1713, 1833, 2408, 2792, 3308, 3327 |
| Bst6I | CTCTTC | 4 cut(s) | 2388, 2883, 3219, 3294 |
| BstAFI | CTTAAG | 1 cut(s) | 892 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 959, 3256 |
| BstBI | TTCGAA | 1 cut(s) | 2553 |
| BstC8I | GCNNGC | 7 cut(s) | 1118, 1239, 1576, 2829, 3032, 3125, 3257 |
| BstDEI | CTNAG | 8 cut(s) | 648, 1008, 1300, 1659, 2444, 2493, 2873, 3243 |
| BstF5I | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BstFNI | CGCG | 2 cut(s) | 698, 2127 |
| BstHHI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2833, 2898 |
| BstMAI | GTCTC | 7 cut(s) | 409, 542, 1151, 1217, 2173, 2485, 3063 |
| BstNI | CCWGG | 1 cut(s) | 921 |
| BstNSI | RCATGY | 5 cut(s) | 1043, 1852, 2782, 2831, 3034 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 519, 3055 |
| BstSCI | CCNGG | 2 cut(s) | 919, 2340 |
| BstSFI | CTRYAG | 5 cut(s) | 912, 1392, 2079, 2114, 3248 |
| BstUI | CGCG | 2 cut(s) | 698, 2127 |
| BstV1I | GCAGC | 7 cut(s) | 691, 926, 1114, 1734, 2065, 2811, 3234 |
| BstV2I | GAAGAC | 4 cut(s) | 255, 519, 641, 1036 |
| BstX2I | RGATCY | 5 cut(s) | 1066, 1363, 2041, 3297, 3411 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1245 |
| BstYI | RGATCY | 5 cut(s) | 1066, 1363, 2041, 3297, 3411 |
| BstZ17I | GTATAC | 1 cut(s) | 658 |
| BsuI | GTATCC | 1 cut(s) | 1725 |
| BsuRI | GGCC | 4 cut(s) | 1116, 1358, 3123, 3355 |
| BtsCI | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BtsI | GCAGTG | 3 cut(s) | 390, 3041, 3257 |
| BtsIMutI | CAGTG | 5 cut(s) | 390, 1561, 2821, 3041, 3257 |
| BveI | ACCTGC | 1 cut(s) | 3139 |
| Cac8I | GCNNGC | 7 cut(s) | 1118, 1239, 1576, 2829, 3032, 3125, 3257 |
| CaiI | CAGNNNCTG | 1 cut(s) | 920 |
| CciI | TCATGA | 3 cut(s) | 2089, 2310, 2626 |
| CfoI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2833, 2898 |
| Cfr13I | GGNCC | 3 cut(s) | 2489, 2877, 3354 |
| Csp6I | GTAC | 7 cut(s) | 1606, 1789, 1890, 1998, 2331, 2354, 3328 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3148, 3183 |
| CviQI | GTAC | 7 cut(s) | 1606, 1789, 1890, 1998, 2331, 2354, 3328 |
| DdeI | CTNAG | 8 cut(s) | 648, 1008, 1300, 1659, 2444, 2493, 2873, 3243 |
| EaeI | YGGCCR | 1 cut(s) | 1356 |
| Eam1104I | CTCTTC | 4 cut(s) | 2388, 2883, 3219, 3294 |
| EarI | CTCTTC | 4 cut(s) | 2388, 2883, 3219, 3294 |
| Ecl136II | GAGCTC | 1 cut(s) | 3205 |
| Eco130I | CCWWGG | 2 cut(s) | 94, 359 |
| Eco147I | AGGCCT | 2 cut(s) | 1116, 3123 |
| Eco24I | GRGCYC | 1 cut(s) | 3207 |
| Eco31I | GGTCTC | 1 cut(s) | 2485 |
| Eco32I | GATATC | 2 cut(s) | 781, 1990 |
| Eco47I | GGWCC | 2 cut(s) | 2489, 2877 |
| Eco53kI | GAGCTC | 1 cut(s) | 3205 |
| Eco57I | CTGAAG | 1 cut(s) | 267 |
| Eco88I | CYCGRG | 1 cut(s) | 72 |
| EcoICRI | GAGCTC | 1 cut(s) | 3205 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2489, 2877 |
| EcoRI | GAATTC | 1 cut(s) | 422 |
| EcoRII | CCWGG | 1 cut(s) | 919 |
| EcoRV | GATATC | 2 cut(s) | 781, 1990 |
| EcoT14I | CCWWGG | 2 cut(s) | 94, 359 |
| EcoT22I | ATGCAT | 1 cut(s) | 1494 |
| EcoT38I | GRGCYC | 1 cut(s) | 3207 |
| ErhI | CCWWGG | 2 cut(s) | 94, 359 |
| Esp3I | CGTCTC | 1 cut(s) | 542 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 335, 367, 824, 856, 827, 859 |
| FaqI | GGGAC | 2 cut(s) | 1475, 2210 |
| FauI | CCCGC | 1 cut(s) | 2556 |
| FauNDI | CATATG | 2 cut(s) | 1202, 1618 |
| FbaI | TGATCA | 1 cut(s) | 1468 |
| FblI | GTMKAC | 1 cut(s) | 657 |
| Fnu4HI | GCNGC | 7 cut(s) | 680, 915, 1128, 1748, 2079, 2825, 3248 |
| FokI | GGATG | 5 cut(s) | 77, 455, 548, 899, 1366 |
| FriOI | GRGCYC | 1 cut(s) | 3207 |
| Fsp4HI | GCNGC | 7 cut(s) | 680, 915, 1128, 1748, 2079, 2825, 3248 |
| FspAI | RTGCGCAY | 1 cut(s) | 2897 |
| FspBI | CTAG | 5 cut(s) | 419, 2219, 2426, 3074, 3293 |
| FspI | TGCGCA | 2 cut(s) | 1670, 2897 |
| GlaI | GCGC | 6 cut(s) | 287, 1670, 1979, 2126, 2832, 2897 |
| GluI | GCNGC | 7 cut(s) | 680, 915, 1128, 1748, 2079, 2825, 3248 |
| GsuI | CTGGAG | 3 cut(s) | 1548, 1568, 2900 |
| HaeIII | GGCC | 4 cut(s) | 1116, 1358, 3123, 3355 |
| HapII | CCGG | 3 cut(s) | 2342, 2885, 2942 |
| HhaI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2833, 2898 |
| Hin6I | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2831, 2896 |
| HinP1I | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2831, 2896 |
| HincII | GTYRAC | 2 cut(s) | 2658, 3079 |
| HindII | GTYRAC | 2 cut(s) | 2658, 3079 |
| HindIII | AAGCTT | 2 cut(s) | 2690, 3220 |
| HpaI | GTTAAC | 1 cut(s) | 2658 |
| HpaII | CCGG | 3 cut(s) | 2342, 2885, 2942 |
| HphI | GGTGA | 8 cut(s) | 100, 424, 980, 1463, 1477, 1594, 1634, 3199 |
| Hpy166II | GTNNAC | 4 cut(s) | 388, 658, 2658, 3079 |
| Hpy8I | GTNNAC | 4 cut(s) | 388, 658, 2658, 3079 |
| HpyAV | CCTTC | 8 cut(s) | 340, 504, 2597, 2912, 2957, 3113, 3179, 3260 |
| HpyCH4III | ACNGT | 8 cut(s) | 878, 1556, 1713, 1833, 2408, 2792, 3308, 3327 |
| HpyCH4IV | ACGT | 2 cut(s) | 1282, 1892 |
| HpyF3I | CTNAG | 8 cut(s) | 648, 1008, 1300, 1659, 2444, 2493, 2873, 3243 |
| HpySE526I | ACGT | 2 cut(s) | 1282, 1892 |
| HspAI | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2831, 2896 |
| Kpn2I | TCCGGA | 1 cut(s) | 2941 |
| KpnI | GGTACC | 1 cut(s) | 3331 |
| Ksp22I | TGATCA | 1 cut(s) | 1468 |
| KspAI | GTTAAC | 1 cut(s) | 2658 |
| LmnI | GCTCC | 5 cut(s) | 23, 1160, 2110, 2531, 2609 |
| Lsp1109I | GCAGC | 7 cut(s) | 691, 926, 1114, 1734, 2065, 2811, 3234 |
| LweI | GCATC | 8 cut(s) | 160, 232, 877, 971, 1645, 2004, 2883, 3227 |
| MaeI | CTAG | 5 cut(s) | 419, 2219, 2426, 3074, 3293 |
| MaeII | ACGT | 2 cut(s) | 1282, 1892 |
| MaeIII | GTNAC | 7 cut(s) | 756, 937, 1556, 2057, 2408, 2594, 3374 |
| MflI | RGATCY | 5 cut(s) | 1066, 1363, 2041, 3297, 3411 |
| MhlI | GDGCHC | 1 cut(s) | 3207 |
| MluI | ACGCGT | 1 cut(s) | 696 |
| MlyI | GAGTC | 7 cut(s) | 383, 804, 917, 1553, 2960, 3011, 3045 |
| MmeI | TCCRAC | 5 cut(s) | 1384, 1749, 2308, 2569, 2693 |
| Mph1103I | ATGCAT | 1 cut(s) | 1494 |
| MroI | TCCGGA | 1 cut(s) | 2941 |
| MroXI | GAANNNNTTC | 2 cut(s) | 836, 839 |
| MslI | CAYNNNNRTG | 3 cut(s) | 410, 855, 2738 |
| MspCI | CTTAAG | 1 cut(s) | 892 |
| MspI | CCGG | 3 cut(s) | 2342, 2885, 2942 |
| MspR9I | CCNGG | 2 cut(s) | 921, 2342 |
| MvaI | CCWGG | 1 cut(s) | 921 |
| MvnI | CGCG | 2 cut(s) | 698, 2127 |
| NciI | CCSGG | 1 cut(s) | 2342 |
| NdeI | CATATG | 2 cut(s) | 1202, 1618 |
| NlaIV | GGNNCC | 1 cut(s) | 3329 |
| NmeAIII | GCCGAG | 1 cut(s) | 1573 |
| NmuCI | GTSAC | 4 cut(s) | 756, 937, 1556, 3374 |
| NsbI | TGCGCA | 2 cut(s) | 1670, 2897 |
| NsiI | ATGCAT | 1 cut(s) | 1494 |
| NspI | RCATGY | 5 cut(s) | 1043, 1852, 2782, 2831, 3034 |
| NspV | TTCGAA | 1 cut(s) | 2553 |
| OliI | CACNNNNGTG | 1 cut(s) | 2738 |
| PacI | TTAATTAA | 1 cut(s) | 1971 |
| PaeI | GCATGC | 2 cut(s) | 2831, 3034 |
| PagI | TCATGA | 3 cut(s) | 2089, 2310, 2626 |
| PceI | AGGCCT | 2 cut(s) | 1116, 3123 |
| PciI | ACATGT | 3 cut(s) | 1039, 1848, 2778 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3060 |
| PdmI | GAANNNNTTC | 2 cut(s) | 836, 839 |
| PfeI | GAWTC | 7 cut(s) | 578, 604, 1160, 1696, 2212, 2249, 2337 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2923 |
| PfoI | TCCNGGA | 1 cut(s) | 2340 |
| PkrI | GCNGC | 7 cut(s) | 681, 916, 1129, 1749, 2080, 2826, 3249 |
| PleI | GAGTC | 7 cut(s) | 383, 804, 916, 1553, 2959, 3010, 3045 |
| PpsI | GAGTC | 7 cut(s) | 383, 804, 916, 1553, 2959, 3010, 3045 |
| PpuMI | RGGWCCY | 2 cut(s) | 2489, 2877 |
| PscI | ACATGT | 3 cut(s) | 1039, 1848, 2778 |
| PshAI | GACNNNNGTC | 2 cut(s) | 519, 3055 |
| Psp124BI | GAGCTC | 1 cut(s) | 3207 |
| Psp1406I | AACGTT | 1 cut(s) | 1282 |
| Psp5II | RGGWCCY | 2 cut(s) | 2489, 2877 |
| Psp6I | CCWGG | 1 cut(s) | 919 |
| PspGI | CCWGG | 1 cut(s) | 919 |
| PspN4I | GGNNCC | 1 cut(s) | 3329 |
| PspPI | GGNCC | 3 cut(s) | 2489, 2877, 3354 |
| PspPPI | RGGWCCY | 2 cut(s) | 2489, 2877 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 144, 176, 857, 889 |
| PstI | CTGCAG | 4 cut(s) | 916, 1396, 2083, 3252 |
| PstNI | CAGNNNCTG | 1 cut(s) | 920 |
| PsuI | RGATCY | 5 cut(s) | 1066, 1363, 2041, 3297, 3411 |
| RsaI | GTAC | 7 cut(s) | 1607, 1790, 1891, 1999, 2332, 2355, 3329 |
| RsaNI | GTAC | 7 cut(s) | 1606, 1789, 1890, 1998, 2331, 2354, 3328 |
| RseI | CAYNNNNRTG | 3 cut(s) | 410, 855, 2738 |
| SacI | GAGCTC | 1 cut(s) | 3207 |
| SatI | GCNGC | 7 cut(s) | 680, 915, 1128, 1748, 2079, 2825, 3248 |
| Sau96I | GGNCC | 3 cut(s) | 2489, 2877, 3354 |
| SchI | GAGTC | 7 cut(s) | 383, 804, 917, 1553, 2960, 3011, 3045 |
| ScrFI | CCNGG | 2 cut(s) | 921, 2342 |
| SduI | GDGCHC | 1 cut(s) | 3207 |
| SfaNI | GCATC | 8 cut(s) | 160, 232, 877, 971, 1645, 2004, 2883, 3227 |
| SfcI | CTRYAG | 5 cut(s) | 912, 1392, 2079, 2114, 3248 |
| SfuI | TTCGAA | 1 cut(s) | 2553 |
| SinI | GGWCC | 2 cut(s) | 2489, 2877 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 410, 855, 2738 |
| SmlI | CTYRAG | 4 cut(s) | 44, 812, 892, 1432 |
| SmoI | CTYRAG | 4 cut(s) | 44, 812, 892, 1432 |
| SpeI | ACTAGT | 1 cut(s) | 2218 |
| SphI | GCATGC | 2 cut(s) | 2831, 3034 |
| SseBI | AGGCCT | 2 cut(s) | 1116, 3123 |
| SsiI | CCGC | 5 cut(s) | 2021, 2127, 2563, 2641, 3028 |
| SspI | AATATT | 2 cut(s) | 1168, 2158 |
| SspMI | CTAG | 5 cut(s) | 419, 2219, 2426, 3074, 3293 |
| SstI | GAGCTC | 1 cut(s) | 3207 |
| StuI | AGGCCT | 2 cut(s) | 1116, 3123 |
| StyD4I | CCNGG | 2 cut(s) | 919, 2340 |
| StyI | CCWWGG | 2 cut(s) | 94, 359 |
| TaaI | ACNGT | 8 cut(s) | 878, 1556, 1713, 1833, 2408, 2792, 3308, 3327 |
| TaiI | ACGT | 2 cut(s) | 1285, 1895 |
| TaqI | TCGA | 9 cut(s) | 165, 581, 1270, 1419, 1930, 2263, 2553, 2772, 3063 |
| TatI | WGTACW | 1 cut(s) | 2353 |
| TfiI | GAWTC | 7 cut(s) | 578, 604, 1160, 1696, 2212, 2249, 2337 |
| TscAI | CASTG | 5 cut(s) | 390, 1561, 2821, 3041, 3257 |
| TseFI | GTSAC | 4 cut(s) | 756, 937, 1556, 3374 |
| TseI | GCWGC | 7 cut(s) | 679, 914, 1127, 1747, 2078, 2824, 3247 |
| Tsp45I | GTSAC | 4 cut(s) | 756, 937, 1556, 3374 |
| TspDTI | ATGAA | 7 cut(s) | 79, 356, 1400, 1625, 2141, 2615, 3096 |
| TspGWI | ACGGA | 1 cut(s) | 2258 |
| TspRI | CASTG | 5 cut(s) | 390, 1561, 2821, 3041, 3257 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2923 |
| Vha464I | CTTAAG | 1 cut(s) | 892 |
| VpaK11BI | GGWCC | 2 cut(s) | 2489, 2877 |
| XapI | RAATTY | 7 cut(s) | 302, 335, 422, 719, 1637, 2549, 2797 |
| XbaI | TCTAGA | 1 cut(s) | 3292 |
| XceI | RCATGY | 5 cut(s) | 1043, 1852, 2782, 2831, 3034 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 616 |
| XmiI | GTMKAC | 1 cut(s) | 657 |
| XmnI | GAANNNNTTC | 2 cut(s) | 836, 839 |
| XspI | CTAG | 5 cut(s) | 419, 2219, 2426, 3074, 3293 |
| Zsp2I | ATGCAT | 1 cut(s) | 1494 |