Rw1G013830

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
30825935 .. 30827979
2045 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G013830.1

Sequence Viewer

Length: 1824 bp
ATGGCTCTGTTCCGAGGTCACAAGGCCTCCCTTTCCAGATATACTACTTCTCCTTCTGGACTTGCTTATGACGTGTTCCTGAGCTTCAGAGGTGAAGACACCCGAAAGAACTTCACTGACCACCTCTACACGGCCCTTGTCAACGCCCGATTTCGAACTTTCCGGGATGACGGACTCGAGAAAGGGAAAAATATCAAGGAAGAGCTTGAGAATGCCATTCGACAGTCACGAAGTTCTGTCATTGTGTTTTCGAAAGACTACACCTCTTCCAAATGGTGCCTGGACGAGCTTGTCATGATCCTTGAACGCAAGAGGACCTCCAATCATGTCGTGTTACCGGTATTCTACGACGTTAATCCATCTCAACTGAGGAAACATGCAGAAACTCTTGCAAAGGTTCCTAAGTACCAAGAAAATCAATCCTCCGAGAAGTTGAATGGATGGCGGGCAGCACTTAGAGAAGTTGCAGATCTAGCAGGAAATGTTTTAGAAAATGAAGCTGACGGGCACGAGTCAAAGTTCATCCAAAAAATTGTTAGAGAGATTCAAGACAAGCTAGGTCGTGTGCCCCTAAGTGATGTCCAGAAGGAATTAGAGGATAAGTTGTTATCTGTTAACCCTGTTCTTGATGATGCCGAGGGGAAGCAACTGAAATTCCAAACGACTGTGAAGCCATGGCTCCATAAGCTTAAAGAGGCTGTCTATGAGGCTGAGGACCTGTTGCAGGAGATCAAAACAGAAGTGTTGAGGCACAAGAACAATGACGAATATGGGAGTAGCAGCAGTAAGGTACATGAGCTCATCTCTACTCCATCTCATGCTTTTGACTCAGCTTTAATATACTCCAGGGTAGAGGAAGTTCTTGAAAAACTAAACAACATTTCGAAGCAGACAAAAGATGTCCTGGATTCAGCATCTGTGTATGGAAGAGGTGAAGAGAAAGAAAGATTCATTAAATTATTGCTATCAGATGATGAGACTGGCAATGAAATAGGTGTGATTCCTATTGTGGGTATGGGTGGGATCGGAAAGACAACCCTTGCCCAGTTTCTATACAACGATGTTAGAGTCGAGCAACATTTTCACCTCCAAGCATGGGTTTGTGTTTCAAAAGAATTTGATGTTTTTAGGATCTCGCAACACATTTATGAGTCCCGCACTTCAAAATCTTGCCAAAGCACAAACCTAGATCTGCTTCTATCAAAGTTGCAGGCAACTTTGAGGGGGAAAAGGTTCTTCTTTGTTCTTGATGACATCTGGAACAAGAATTATAACCAGTTGGAATTCTTAATGCGTCCCCTTGAGTCTGGAGCACTTGGAAGCAAGATCATTGTTACAACACGTGATGAAAATGTTGCACGTCTGATGGGTAGCCTTGAAGCTCACCATCTCATGCCAATGTCTGAGGAAGATAGCTGGTCGTTATTCGAAAAACATGCCTTCAAAAATGCAGGTGTTGGTACACACTCGCATCTTGAAAAAATCGGTAGACAAATTGTTCAAAAGTGCAATGGTCTTCCTTTGGCTATTAAGTCCCTTGGGGGTCTCTTATGTTCTAAATTGTTAGTGGAGGAATGGGAAAGTATATTGAACAGTGACATGTGGGAGTTCTCACCGGATGAGAGTGACATTCTGCCGTCTCTATGGTTGAGCTATCTAGATCTGCCTCTACATCTCAAGCGTTGTTTTGCCTATAGTTCACTGTATCCCAAGAACTATGAATTTCAAAAATCAGAGTTGGTTTACTTGTGGAAGGCTGAAGATCTATTGCAGCATAAAAAAAAACAAAATGGCAGAAGAAGTCGGGCAAGACTACTTCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

607

Amino Acids

69.69

Weight (kDa)

6.85

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 22 - 195 1.1e-43 TIR domain
TIR_2 PF13676 25 - 123 9.6e-17 TIR domain
Rx_N PF18052 194 - 259 1.5e-13 Rx N-terminal domain
NB-ARC PF00931 314 - 483 5.2e-37 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1272
AarI CACCTGC 1 cut(s) 1442
AasI GACNNNNNNGTC 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 1442
AccB1I GGYRCC 1 cut(s) 276
AccI GTMKAC 1 cut(s) 1489
AciI CCGC 2 cut(s) 445, 1156
AclWI GGATC 3 cut(s) 292, 1031, 1139
AcsI RAATTY 4 cut(s) 653, 1115, 1283, 1721
AcuI CTGAAG 2 cut(s) 70, 1779
AcvI CACGTG 1 cut(s) 1343
AfaI GTAC 3 cut(s) 407, 792, 1462
AfiI CCNNNNNNNGG 4 cut(s) 130, 724, 1010, 1096
AflIII ACRYGT 3 cut(s) 72, 1340, 1599
AgeI ACCGGT 1 cut(s) 337
AjiI CACGTC 2 cut(s) 73, 1361
AjnI CCWGG 3 cut(s) 279, 845, 903
Alw21I GWGCWC 2 cut(s) 801, 1315
Alw26I GTCTC 3 cut(s) 971, 1550, 1644
AlwI GGATC 3 cut(s) 292, 1031, 1139
AlwNI CAGNNNCTG 1 cut(s) 917
Ama87I CYCGRG 1 cut(s) 176
AoxI GGCC 2 cut(s) 24, 132
ApeKI GCWGC 3 cut(s) 449, 780, 1771
ApoI RAATTY 4 cut(s) 653, 1115, 1283, 1721
AsiGI ACCGGT 1 cut(s) 337
Asp700I GAANNNNTTC 1 cut(s) 1232
AspS9I GGNCC 3 cut(s) 133, 315, 715
AsuC2I CCSGG 1 cut(s) 164
AsuHPI GGTGA 5 cut(s) 104, 944, 1076, 1376, 1605
AsuII TTCGAA 4 cut(s) 154, 251, 884, 1428
AvaI CYCGRG 1 cut(s) 176
AvaII GGWCC 2 cut(s) 315, 715
BaeGI GKGCMC 2 cut(s) 510, 570
BanI GGYRCC 1 cut(s) 276
BanII GRGCYC 1 cut(s) 801
BauI CACGAG 1 cut(s) 509
BbrPI CACGTG 1 cut(s) 1343
BbsI GAAGAC 2 cut(s) 102, 1508
Bbv12I GWGCWC 2 cut(s) 801, 1315
BbvCI CCTCAGC 1 cut(s) 711
BbvI GCAGC 3 cut(s) 461, 792, 1783
BccI CCATC 5 cut(s) 367, 435, 820, 1360, 1395
BceAI ACGGC 2 cut(s) 147, 1621
BcgI CGANNNNNNTGC 2 cut(s) 1418, 1452
BciT130I CCWGG 3 cut(s) 281, 847, 905
BciVI GTATCC 1 cut(s) 1716
BcnI CCSGG 1 cut(s) 164
BcoDI GTCTC 3 cut(s) 971, 1550, 1644
BfaI CTAG 4 cut(s) 473, 557, 1187, 1658
BfmI CTRYAG 1 cut(s) 1693
BfuAI ACCTGC 1 cut(s) 1442
BfuI GTATCC 1 cut(s) 1716
BglII AGATCT 4 cut(s) 469, 1189, 1660, 1762
BisI GCNGC 3 cut(s) 450, 781, 1772
BlsI GCNGC 3 cut(s) 451, 782, 1773
Bme1390I CCNGG 4 cut(s) 164, 281, 847, 905
Bme18I GGWCC 2 cut(s) 315, 715
BmeT110I CYCGRG 1 cut(s) 176
BmgBI CACGTC 2 cut(s) 73, 1361
BmgT120I GGNCC 3 cut(s) 133, 315, 715
BmiI GGNNCC 3 cut(s) 278, 399, 680
BmrFI CCNGG 4 cut(s) 164, 281, 847, 905
BmrI ACTGGG 1 cut(s) 1039
BmsI GCATC 3 cut(s) 622, 923, 1480
BmuI ACTGGG 1 cut(s) 1039
BpiI GAAGAC 2 cut(s) 102, 1508
BplI GAGNNNNNCTC 2 cut(s) 788, 820
BpmI CTGGAG 2 cut(s) 829, 1329
Bpu10I CCTNAGC 2 cut(s) 80, 711
Bpu14I TTCGAA 4 cut(s) 154, 251, 884, 1428
BpuEI CTTGAG 3 cut(s) 227, 1322, 1661
BpuMI CCSGG 1 cut(s) 164
BsaAI YACGTR 1 cut(s) 1343
BsaI GGTCTC 1 cut(s) 1550
BsaJI CCNNGG 5 cut(s) 13, 636, 674, 846, 1537
BsaWI WCCGGW 2 cut(s) 337, 1615
BsaXI ACNNNNNCTCC 4 cut(s) 11, 34, 41, 64
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 724, 1010, 1096
Bse118I RCCGGY 1 cut(s) 337
Bse1I ACTGG 3 cut(s) 985, 1045, 1276
Bse3DI GCAATG 2 cut(s) 991, 1516
BseBI CCWGG 3 cut(s) 281, 847, 905
BseDI CCNNGG 5 cut(s) 13, 636, 674, 846, 1537
BseGI GGATG 4 cut(s) 172, 446, 522, 1624
BseLI CCNNNNNNNGG 4 cut(s) 130, 724, 1010, 1096
BseMI GCAATG 2 cut(s) 991, 1516
BseMII CTCAG 5 cut(s) 71, 359, 702, 843, 1395
BseNI ACTGG 3 cut(s) 985, 1045, 1276
BseSI GKGCMC 2 cut(s) 510, 570
BseXI GCAGC 3 cut(s) 461, 792, 1783
BshFI GGCC 2 cut(s) 26, 134
BshNI GGYRCC 1 cut(s) 276
BshTI ACCGGT 1 cut(s) 337
BsiHKAI GWGCWC 2 cut(s) 801, 1315
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 3 cut(s) 163, 338, 1616
BslFI GGGAC 3 cut(s) 1138, 1281, 1519
BslI CCNNNNNNNGG 4 cut(s) 130, 724, 1010, 1096
BsmAI GTCTC 3 cut(s) 971, 1550, 1644
BsmBI CGTCTC 1 cut(s) 1644
BsmFI GGGAC 3 cut(s) 1138, 1281, 1519
BsmI GAATGC 1 cut(s) 217
BsnI GGCC 2 cut(s) 26, 134
Bso31I GGTCTC 1 cut(s) 1550
BsoBI CYCGRG 1 cut(s) 176
Bsp119I TTCGAA 4 cut(s) 154, 251, 884, 1428
Bsp1286I GDGCHC 4 cut(s) 510, 570, 801, 1315
Bsp143I GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
Bsp19I CCATGG 1 cut(s) 674
BspACI CCGC 2 cut(s) 445, 1156
BspANI GGCC 2 cut(s) 26, 134
BspCNI CTCAG 5 cut(s) 72, 360, 703, 842, 1396
BspHI TCATGA 1 cut(s) 294
BspLI GGNNCC 3 cut(s) 278, 399, 680
BspMI ACCTGC 1 cut(s) 1442
BspPI GGATC 3 cut(s) 292, 1031, 1139
BspQI GCTCTTC 1 cut(s) 195
BspT104I TTCGAA 4 cut(s) 154, 251, 884, 1428
BspT107I GGYRCC 1 cut(s) 276
BspTNI GGTCTC 1 cut(s) 1550
BsrDI GCAATG 2 cut(s) 991, 1516
BsrFI RCCGGY 1 cut(s) 337
BsrI ACTGG 3 cut(s) 985, 1045, 1276
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 5 cut(s) 13, 636, 674, 846, 1537
BssMI GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
BssSI CACGAG 1 cut(s) 509
BssT1I CCWWGG 2 cut(s) 674, 1537
Bst2BI CACGAG 1 cut(s) 509
Bst2UI CCWGG 3 cut(s) 281, 847, 905
Bst4CI ACNGT 4 cut(s) 225, 667, 1595, 1704
Bst6I CTCTTC 4 cut(s) 195, 271, 922, 930
BstBAI YACGTR 1 cut(s) 1343
BstBI TTCGAA 4 cut(s) 154, 251, 884, 1428
BstC8I GCNNGC 2 cut(s) 447, 1212
BstDEI CTNAG 8 cut(s) 80, 368, 402, 455, 572, 711, 829, 1404
BstDSI CCRYGG 1 cut(s) 674
BstENI CCTNNNNNAGG 1 cut(s) 722
BstF5I GGATG 4 cut(s) 172, 446, 522, 1624
BstKTI GATC 9 cut(s) 300, 472, 732, 1026, 1134, 1192, 1329, 1663, 1765
BstMAI GTCTC 3 cut(s) 971, 1550, 1644
BstMBI GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
BstMWI GCNNNNNNNGC 2 cut(s) 473, 685
BstNI CCWGG 3 cut(s) 281, 847, 905
BstNSI RCATGY 3 cut(s) 380, 1439, 1603
BstSCI CCNGG 4 cut(s) 162, 279, 845, 903
BstSFI CTRYAG 1 cut(s) 1693
BstSLI GKGCMC 2 cut(s) 510, 570
BstV1I GCAGC 3 cut(s) 461, 792, 1783
BstV2I GAAGAC 2 cut(s) 102, 1508
BstX2I RGATCY 5 cut(s) 469, 1131, 1189, 1660, 1762
BstYI RGATCY 5 cut(s) 469, 1131, 1189, 1660, 1762
BsuI GTATCC 1 cut(s) 1716
BsuRI GGCC 2 cut(s) 26, 134
BtgI CCRYGG 1 cut(s) 674
BtrI CACGTC 2 cut(s) 73, 1361
BtsCI GGATG 4 cut(s) 172, 446, 522, 1624
BtsIMutI CAGTG 3 cut(s) 114, 1600, 1700
BveI ACCTGC 1 cut(s) 1442
Cac8I GCNNGC 2 cut(s) 447, 1212
CaiI CAGNNNCTG 1 cut(s) 917
CciI TCATGA 1 cut(s) 294
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 3 cut(s) 133, 315, 715
CseI GACGC 1 cut(s) 1283
Csp6I GTAC 3 cut(s) 406, 791, 1461
CspAI ACCGGT 1 cut(s) 337
CviQI GTAC 3 cut(s) 406, 791, 1461
DdeI CTNAG 8 cut(s) 80, 368, 402, 455, 572, 711, 829, 1404
DpnI GATC 9 cut(s) 299, 471, 731, 1025, 1133, 1191, 1328, 1662, 1764
DpnII GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
DrdI GACNNNNNNGTC 1 cut(s) 290
DseDI GACNNNNNNGTC 1 cut(s) 290
Eam1104I CTCTTC 4 cut(s) 195, 271, 922, 930
EarI CTCTTC 4 cut(s) 195, 271, 922, 930
Ecl136II GAGCTC 1 cut(s) 799
Eco130I CCWWGG 2 cut(s) 674, 1537
Eco147I AGGCCT 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 801
Eco31I GGTCTC 1 cut(s) 1550
Eco47I GGWCC 2 cut(s) 315, 715
Eco53kI GAGCTC 1 cut(s) 799
Eco57I CTGAAG 2 cut(s) 70, 1779
Eco72I CACGTG 1 cut(s) 1343
Eco88I CYCGRG 1 cut(s) 176
EcoICRI GAGCTC 1 cut(s) 799
EcoNI CCTNNNNNAGG 1 cut(s) 722
EcoO109I RGGNCCY 2 cut(s) 315, 715
EcoRI GAATTC 1 cut(s) 1283
EcoRII CCWGG 3 cut(s) 279, 845, 903
EcoT14I CCWWGG 2 cut(s) 674, 1537
EcoT38I GRGCYC 1 cut(s) 801
ErhI CCWWGG 2 cut(s) 674, 1537
Esp3I CGTCTC 1 cut(s) 1644
FaqI GGGAC 3 cut(s) 1138, 1281, 1519
FauI CCCGC 2 cut(s) 438, 1163
FblI GTMKAC 1 cut(s) 1489
Fnu4HI GCNGC 3 cut(s) 450, 781, 1772
FokI GGATG 4 cut(s) 179, 453, 509, 1631
FriOI GRGCYC 1 cut(s) 801
Fsp4HI GCNGC 3 cut(s) 450, 781, 1772
FspBI CTAG 4 cut(s) 473, 557, 1187, 1658
GluI GCNGC 3 cut(s) 450, 781, 1772
GsuI CTGGAG 2 cut(s) 829, 1329
HaeIII GGCC 2 cut(s) 26, 134
HapII CCGG 3 cut(s) 163, 338, 1616
HgaI GACGC 1 cut(s) 1283
HincII GTYRAC 2 cut(s) 142, 616
HindII GTYRAC 2 cut(s) 142, 616
HindIII AAGCTT 1 cut(s) 686
HpaI GTTAAC 1 cut(s) 616
HpaII CCGG 3 cut(s) 163, 338, 1616
HphI GGTGA 5 cut(s) 104, 944, 1076, 1376, 1605
Hpy166II GTNNAC 6 cut(s) 142, 616, 1463, 1490, 1700, 1744
Hpy188I TCNGA 8 cut(s) 14, 89, 427, 970, 1028, 1365, 1405, 1735
Hpy8I GTNNAC 6 cut(s) 142, 616, 1463, 1490, 1700, 1744
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 4 cut(s) 63, 580, 1450, 1747
HpyCH4III ACNGT 4 cut(s) 225, 667, 1595, 1704
HpyCH4IV ACGT 4 cut(s) 72, 351, 1342, 1360
HpyCH4V TGCA 9 cut(s) 380, 392, 467, 724, 1210, 1358, 1451, 1509, 1771
HpyF10VI GCNNNNNNNGC 2 cut(s) 473, 685
HpyF3I CTNAG 8 cut(s) 80, 368, 402, 455, 572, 711, 829, 1404
HpySE526I ACGT 4 cut(s) 72, 351, 1342, 1360
KspAI GTTAAC 1 cut(s) 616
Kzo9I GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
LguI GCTCTTC 1 cut(s) 195
LmnI GCTCC 2 cut(s) 684, 1310
Lsp1109I GCAGC 3 cut(s) 461, 792, 1783
LweI GCATC 3 cut(s) 622, 923, 1480
MaeI CTAG 4 cut(s) 473, 557, 1187, 1658
MaeII ACGT 4 cut(s) 72, 351, 1342, 1360
MaeIII GTNAC 6 cut(s) 17, 225, 333, 1333, 1595, 1625
MalI GATC 9 cut(s) 299, 471, 731, 1025, 1133, 1191, 1328, 1662, 1764
MboI GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
MflI RGATCY 5 cut(s) 469, 1131, 1189, 1660, 1762
MhlI GDGCHC 4 cut(s) 510, 570, 801, 1315
MlyI GAGTC 6 cut(s) 168, 521, 821, 1077, 1160, 1313
MmeI TCCRAC 1 cut(s) 1260
MroXI GAANNNNTTC 1 cut(s) 1232
MseI TTAA 7 cut(s) 354, 615, 690, 836, 954, 1289, 1530
MslI CAYNNNNRTG 2 cut(s) 1146, 1397
MspI CCGG 3 cut(s) 163, 338, 1616
MspR9I CCNGG 4 cut(s) 164, 281, 847, 905
Mva1269I GAATGC 1 cut(s) 217
MvaI CCWGG 3 cut(s) 281, 847, 905
MwoI GCNNNNNNNGC 2 cut(s) 473, 685
NciI CCSGG 1 cut(s) 164
NcoI CCATGG 1 cut(s) 674
NdeII GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
NlaIV GGNNCC 3 cut(s) 278, 399, 680
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 4 cut(s) 17, 225, 1595, 1625
NspI RCATGY 3 cut(s) 380, 1439, 1603
NspV TTCGAA 4 cut(s) 154, 251, 884, 1428
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 294
PaqCI CACCTGC 1 cut(s) 1442
PceI AGGCCT 1 cut(s) 26
PciI ACATGT 1 cut(s) 1599
PciSI GCTCTTC 1 cut(s) 195
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 1232
PfeI GAWTC 4 cut(s) 544, 908, 948, 1000
PfoI TCCNGGA 2 cut(s) 162, 903
PinAI ACCGGT 1 cut(s) 337
PkrI GCNGC 3 cut(s) 451, 782, 1773
PleI GAGTC 6 cut(s) 168, 520, 821, 1076, 1159, 1312
PmaCI CACGTG 1 cut(s) 1343
PmlI CACGTG 1 cut(s) 1343
PpsI GAGTC 6 cut(s) 168, 520, 821, 1076, 1159, 1312
Ppu21I YACGTR 1 cut(s) 1343
PpuMI RGGWCCY 2 cut(s) 315, 715
PscI ACATGT 1 cut(s) 1599
PsiI TTATAA 1 cut(s) 1272
Psp124BI GAGCTC 1 cut(s) 801
Psp5II RGGWCCY 2 cut(s) 315, 715
Psp6I CCWGG 3 cut(s) 279, 845, 903
PspCI CACGTG 1 cut(s) 1343
PspGI CCWGG 3 cut(s) 279, 845, 903
PspN4I GGNNCC 3 cut(s) 278, 399, 680
PspPI GGNCC 3 cut(s) 133, 315, 715
PspPPI RGGWCCY 2 cut(s) 315, 715
PsrI GAACNNNNNNTAC 2 cut(s) 843, 875
PstNI CAGNNNCTG 1 cut(s) 917
PsuI RGATCY 5 cut(s) 469, 1131, 1189, 1660, 1762
RsaI GTAC 3 cut(s) 407, 792, 1462
RsaNI GTAC 3 cut(s) 406, 791, 1461
RseI CAYNNNNRTG 2 cut(s) 1146, 1397
SacI GAGCTC 1 cut(s) 801
SapI GCTCTTC 1 cut(s) 195
SaqAI TTAA 7 cut(s) 354, 615, 690, 836, 954, 1289, 1530
SatI GCNGC 3 cut(s) 450, 781, 1772
Sau3AI GATC 9 cut(s) 297, 469, 729, 1023, 1131, 1189, 1326, 1660, 1762
Sau96I GGNCC 3 cut(s) 133, 315, 715
SchI GAGTC 6 cut(s) 168, 521, 821, 1077, 1160, 1313
ScrFI CCNGG 4 cut(s) 164, 281, 847, 905
SduI GDGCHC 4 cut(s) 510, 570, 801, 1315
SfaNI GCATC 3 cut(s) 622, 923, 1480
SfcI CTRYAG 1 cut(s) 1693
Sfr274I CTCGAG 1 cut(s) 176
SfuI TTCGAA 4 cut(s) 154, 251, 884, 1428
SinI GGWCC 2 cut(s) 315, 715
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 2 cut(s) 1146, 1397
SmlI CTYRAG 4 cut(s) 176, 206, 1301, 1676
SmoI CTYRAG 4 cut(s) 176, 206, 1301, 1676
SseBI AGGCCT 1 cut(s) 26
SsiI CCGC 2 cut(s) 445, 1156
SspMI CTAG 4 cut(s) 473, 557, 1187, 1658
SstI GAGCTC 1 cut(s) 801
StuI AGGCCT 1 cut(s) 26
StyD4I CCNGG 4 cut(s) 162, 279, 845, 903
StyI CCWWGG 2 cut(s) 674, 1537
TaaI ACNGT 4 cut(s) 225, 667, 1595, 1704
TaiI ACGT 4 cut(s) 75, 354, 1345, 1363
TaqI TCGA 7 cut(s) 154, 177, 220, 251, 884, 1071, 1428
TfiI GAWTC 4 cut(s) 544, 908, 948, 1000
Tru1I TTAA 7 cut(s) 354, 615, 690, 836, 954, 1289, 1530
Tru9I TTAA 7 cut(s) 354, 615, 690, 836, 954, 1289, 1530
TscAI CASTG 3 cut(s) 121, 1600, 1707
TseFI GTSAC 4 cut(s) 17, 225, 1595, 1625
TseI GCWGC 3 cut(s) 449, 780, 1771
Tsp45I GTSAC 4 cut(s) 17, 225, 1595, 1625
TspDTI ATGAA 6 cut(s) 510, 511, 940, 1002, 1362, 1734
TspGWI ACGGA 1 cut(s) 186
TspRI CASTG 3 cut(s) 121, 1600, 1707
VpaK11BI GGWCC 2 cut(s) 315, 715
XagI CCTNNNNNAGG 1 cut(s) 722
XapI RAATTY 4 cut(s) 653, 1115, 1283, 1721
XbaI TCTAGA 1 cut(s) 1657
XceI RCATGY 3 cut(s) 380, 1439, 1603
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 1 cut(s) 1489
XmnI GAANNNNTTC 1 cut(s) 1232
XspI CTAG 4 cut(s) 473, 557, 1187, 1658
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.