Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 102 | 9.7e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 179 - 348 | 2.7e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 432 - 502 | 2.3e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 548 - 859 | 1.8e-30 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 681 - 806 | 9.2e-36 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| Acc16I | TGCGCA | 1 cut(s) | 2825 |
| Acc65I | GGTACC | 2 cut(s) | 971, 1734 |
| AccB1I | GGYRCC | 2 cut(s) | 971, 1734 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3170 |
| AccI | GTMKAC | 2 cut(s) | 432, 2872 |
| AccII | CGCG | 2 cut(s) | 531, 2073 |
| AccIII | TCCGGA | 1 cut(s) | 1517 |
| AciI | CCGC | 9 cut(s) | 111, 319, 569, 755, 1204, 2073, 2602, 2714, 2960 |
| AclI | AACGTT | 1 cut(s) | 3229 |
| AclWI | GGATC | 3 cut(s) | 1052, 2093, 2930 |
| AcsI | RAATTY | 5 cut(s) | 371, 716, 833, 868, 2626 |
| AcuI | CTGAAG | 6 cut(s) | 294, 1289, 1371, 1718, 2045, 2321 |
| AcvI | CACGTG | 1 cut(s) | 944 |
| AfaI | GTAC | 5 cut(s) | 973, 1557, 1736, 1837, 3131 |
| AfeI | AGCGCT | 1 cut(s) | 1274 |
| AflIII | ACRYGT | 1 cut(s) | 941 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1018 |
| AjnI | CCWGG | 2 cut(s) | 392, 2290 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 131, 163, 1441, 1473 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2984, 3016 |
| Alw26I | GTCTC | 6 cut(s) | 334, 1519, 2483, 2678, 2745, 3236 |
| AlwI | GGATC | 3 cut(s) | 1052, 2093, 2930 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2344 |
| Ama87I | CYCGRG | 2 cut(s) | 2089, 2492 |
| Aor13HI | TCCGGA | 1 cut(s) | 1517 |
| Aor51HI | AGCGCT | 1 cut(s) | 1274 |
| AoxI | GGCC | 2 cut(s) | 546, 3257 |
| ApeKI | GCWGC | 6 cut(s) | 118, 315, 1118, 1750, 2383, 2956 |
| ApoI | RAATTY | 5 cut(s) | 371, 716, 833, 868, 2626 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2690, 2722 |
| AseI | ATTAAT | 2 cut(s) | 1913, 2424 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2784 |
| Asp718I | GGTACC | 2 cut(s) | 971, 1734 |
| AspLEI | GCGC | 3 cut(s) | 1275, 2073, 2826 |
| AspS9I | GGNCC | 3 cut(s) | 74, 1647, 3258 |
| AsuC2I | CCSGG | 1 cut(s) | 2503 |
| AsuHPI | GGTGA | 5 cut(s) | 2045, 2195, 2251, 2446, 3034 |
| AsuII | TTCGAA | 1 cut(s) | 3011 |
| AsuNHI | GCTAGC | 1 cut(s) | 2386 |
| AvaI | CYCGRG | 2 cut(s) | 2089, 2492 |
| AvaII | GGWCC | 2 cut(s) | 74, 1647 |
| BaeGI | GKGCMC | 1 cut(s) | 2282 |
| BanI | GGYRCC | 2 cut(s) | 971, 1734 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1344, 1376 |
| BbrPI | CACGTG | 1 cut(s) | 944 |
| BbsI | GAAGAC | 3 cut(s) | 110, 1017, 2327 |
| BbvI | GCAGC | 6 cut(s) | 105, 327, 1105, 1737, 2395, 2943 |
| BccI | CCATC | 9 cut(s) | 58, 286, 566, 961, 1339, 1966, 2380, 2639, 3164 |
| BceAI | ACGGC | 4 cut(s) | 1687, 2788, 2983, 3037 |
| BciT130I | CCWGG | 2 cut(s) | 394, 2292 |
| BciVI | GTATCC | 1 cut(s) | 390 |
| BclI | TGATCA | 1 cut(s) | 1609 |
| BcnI | CCSGG | 1 cut(s) | 2503 |
| BcoDI | GTCTC | 6 cut(s) | 334, 1519, 2483, 2678, 2745, 3236 |
| BfaI | CTAG | 9 cut(s) | 198, 516, 788, 1418, 1755, 2018, 2313, 2387, 3221 |
| BfoI | RGCGCY | 1 cut(s) | 1276 |
| BfuI | GTATCC | 1 cut(s) | 390 |
| BglII | AGATCT | 3 cut(s) | 784, 1354, 1987 |
| BisI | GCNGC | 9 cut(s) | 119, 316, 319, 1119, 1751, 2384, 2714, 2957, 2960 |
| BlsI | GCNGC | 9 cut(s) | 120, 317, 320, 1120, 1752, 2385, 2715, 2958, 2961 |
| BmcAI | AGTACT | 1 cut(s) | 1557 |
| Bme1390I | CCNGG | 3 cut(s) | 394, 2292, 2503 |
| Bme18I | GGWCC | 2 cut(s) | 74, 1647 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1018 |
| BmeT110I | CYCGRG | 2 cut(s) | 2089, 2492 |
| BmgT120I | GGNCC | 3 cut(s) | 74, 1647, 3258 |
| BmiI | GGNNCC | 4 cut(s) | 390, 973, 1736, 2446 |
| BmrFI | CCNGG | 3 cut(s) | 394, 2292, 2503 |
| BmrI | ACTGGG | 2 cut(s) | 889, 1568 |
| BmsI | GCATC | 7 cut(s) | 160, 1786, 1950, 2110, 2152, 2647, 2835 |
| BmtI | GCTAGC | 1 cut(s) | 2390 |
| BmuI | ACTGGG | 2 cut(s) | 889, 1568 |
| BoxI | GACNNNNGTC | 1 cut(s) | 381 |
| BpiI | GAAGAC | 3 cut(s) | 110, 1017, 2327 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 15, 47 |
| BpmI | CTGGAG | 1 cut(s) | 2243 |
| Bpu14I | TTCGAA | 1 cut(s) | 3011 |
| BpuEI | CTTGAG | 6 cut(s) | 329, 910, 1287, 1484, 2426, 2689 |
| BpuMI | CCSGG | 1 cut(s) | 2503 |
| BsaAI | YACGTR | 1 cut(s) | 944 |
| BsaJI | CCNNGG | 5 cut(s) | 94, 392, 1967, 2493, 2502 |
| BsaWI | WCCGGW | 5 cut(s) | 71, 76, 1517, 3084, 3153 |
| Bse1I | ACTGG | 7 cut(s) | 586, 884, 1329, 1563, 2035, 2658, 3003 |
| Bse3DI | GCAATG | 1 cut(s) | 2708 |
| BseAI | TCCGGA | 1 cut(s) | 1517 |
| BseBI | CCWGG | 2 cut(s) | 394, 2292 |
| BseDI | CCNNGG | 5 cut(s) | 94, 392, 1967, 2493, 2502 |
| BseMI | GCAATG | 1 cut(s) | 2708 |
| BseMII | CTCAG | 6 cut(s) | 202, 1566, 2693, 2758, 2905, 3090 |
| BseNI | ACTGG | 7 cut(s) | 586, 884, 1329, 1563, 2035, 2658, 3003 |
| BseRI | GAGGAG | 5 cut(s) | 191, 1068, 1226, 2579, 2972 |
| BseSI | GKGCMC | 1 cut(s) | 2282 |
| BseXI | GCAGC | 6 cut(s) | 105, 327, 1105, 1737, 2395, 2943 |
| BseYI | CCCAGC | 1 cut(s) | 113 |
| BsgI | GTGCAG | 1 cut(s) | 3182 |
| Bsh1236I | CGCG | 2 cut(s) | 531, 2073 |
| BshFI | GGCC | 2 cut(s) | 548, 3259 |
| BshNI | GGYRCC | 2 cut(s) | 971, 1734 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2089, 2492 |
| BsiSI | CCGG | 6 cut(s) | 72, 77, 1518, 2502, 3085, 3154 |
| BslFI | GGGAC | 2 cut(s) | 1631, 2475 |
| BsmAI | GTCTC | 6 cut(s) | 334, 1519, 2483, 2678, 2745, 3236 |
| BsmBI | CGTCTC | 1 cut(s) | 2745 |
| BsmFI | GGGAC | 2 cut(s) | 1631, 2475 |
| BsmI | GAATGC | 1 cut(s) | 2507 |
| BsnI | GGCC | 2 cut(s) | 548, 3259 |
| BsoBI | CYCGRG | 2 cut(s) | 2089, 2492 |
| Bsp119I | TTCGAA | 1 cut(s) | 3011 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2282 |
| Bsp13I | TCCGGA | 1 cut(s) | 1517 |
| Bsp1407I | TGTACA | 1 cut(s) | 3129 |
| BspACI | CCGC | 9 cut(s) | 111, 319, 569, 755, 1204, 2073, 2602, 2714, 2960 |
| BspANI | GGCC | 2 cut(s) | 548, 3259 |
| BspCNI | CTCAG | 6 cut(s) | 201, 1565, 2694, 2757, 2904, 3089 |
| BspEI | TCCGGA | 1 cut(s) | 1517 |
| BspFNI | CGCG | 2 cut(s) | 531, 2073 |
| BspLI | GGNNCC | 4 cut(s) | 390, 973, 1736, 2446 |
| BspOI | GCTAGC | 1 cut(s) | 2390 |
| BspPI | GGATC | 3 cut(s) | 1052, 2093, 2930 |
| BspT104I | TTCGAA | 1 cut(s) | 3011 |
| BspT107I | GGYRCC | 2 cut(s) | 971, 1734 |
| BsrDI | GCAATG | 1 cut(s) | 2708 |
| BsrGI | TGTACA | 1 cut(s) | 3129 |
| BsrI | ACTGG | 7 cut(s) | 586, 884, 1329, 1563, 2035, 2658, 3003 |
| BssECI | CCNNGG | 5 cut(s) | 94, 392, 1967, 2493, 2502 |
| BssT1I | CCWWGG | 1 cut(s) | 1967 |
| Bst2UI | CCWGG | 2 cut(s) | 394, 2292 |
| Bst4CI | ACNGT | 7 cut(s) | 1289, 1600, 1874, 2760, 2820, 2858, 3057 |
| Bst6I | CTCTTC | 2 cut(s) | 40, 504 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2722 |
| BstAUI | TGTACA | 1 cut(s) | 3129 |
| BstBAI | YACGTR | 1 cut(s) | 944 |
| BstBI | TTCGAA | 1 cut(s) | 3011 |
| BstC8I | GCNNGC | 6 cut(s) | 961, 1230, 2388, 2521, 3092, 3161 |
| BstEII | GGTNACC | 1 cut(s) | 2497 |
| BstFNI | CGCG | 2 cut(s) | 531, 2073 |
| BstH2I | RGCGCY | 1 cut(s) | 1276 |
| BstHHI | GCGC | 3 cut(s) | 1275, 2073, 2826 |
| BstMAI | GTCTC | 6 cut(s) | 334, 1519, 2483, 2678, 2745, 3236 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 220, 650, 1578, 1783, 2722, 2830 |
| BstNI | CCWGG | 2 cut(s) | 394, 2292 |
| BstNSI | RCATGY | 4 cut(s) | 796, 1040, 2114, 2725 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 381 |
| BstPI | GGTNACC | 1 cut(s) | 2497 |
| BstSCI | CCNGG | 3 cut(s) | 392, 2290, 2501 |
| BstSLI | GKGCMC | 1 cut(s) | 2282 |
| BstUI | CGCG | 2 cut(s) | 531, 2073 |
| BstV1I | GCAGC | 6 cut(s) | 105, 327, 1105, 1737, 2395, 2943 |
| BstV2I | GAAGAC | 3 cut(s) | 110, 1017, 2327 |
| BstX2I | RGATCY | 6 cut(s) | 784, 1057, 1354, 1987, 2085, 2935 |
| BstYI | RGATCY | 6 cut(s) | 784, 1057, 1354, 1987, 2085, 2935 |
| BsuI | GTATCC | 1 cut(s) | 390 |
| BsuRI | GGCC | 2 cut(s) | 548, 3259 |
| BtgZI | GCGATG | 1 cut(s) | 546 |
| BtsIMutI | CAGTG | 1 cut(s) | 2028 |
| Cac8I | GCNNGC | 6 cut(s) | 961, 1230, 2388, 2521, 3092, 3161 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2344 |
| CfoI | GCGC | 3 cut(s) | 1275, 2073, 2826 |
| Cfr13I | GGNCC | 3 cut(s) | 74, 1647, 3258 |
| CpoI | CGGWCCG | 1 cut(s) | 74 |
| CseI | GACGC | 2 cut(s) | 537, 1913 |
| Csp6I | GTAC | 5 cut(s) | 972, 1556, 1735, 1836, 3130 |
| CspI | CGGWCCG | 1 cut(s) | 74 |
| CviQI | GTAC | 5 cut(s) | 972, 1556, 1735, 1836, 3130 |
| DraI | TTTAAA | 1 cut(s) | 873 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1018 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2192 |
| Eam1104I | CTCTTC | 2 cut(s) | 40, 504 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1018 |
| EarI | CTCTTC | 2 cut(s) | 40, 504 |
| EciI | GGCGGA | 1 cut(s) | 2591 |
| Eco130I | CCWWGG | 1 cut(s) | 1967 |
| Eco47I | GGWCC | 2 cut(s) | 74, 1647 |
| Eco47III | AGCGCT | 1 cut(s) | 1274 |
| Eco57I | CTGAAG | 6 cut(s) | 294, 1289, 1371, 1718, 2045, 2321 |
| Eco72I | CACGTG | 1 cut(s) | 944 |
| Eco88I | CYCGRG | 2 cut(s) | 2089, 2492 |
| Eco91I | GGTNACC | 1 cut(s) | 2497 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1647 |
| EcoO65I | GGTNACC | 1 cut(s) | 2497 |
| EcoRII | CCWGG | 2 cut(s) | 392, 2290 |
| EcoT14I | CCWWGG | 1 cut(s) | 1967 |
| EcoT22I | ATGCAT | 1 cut(s) | 1485 |
| ErhI | CCWWGG | 1 cut(s) | 1967 |
| Esp3I | CGTCTC | 1 cut(s) | 2745 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 432, 464, 474, 506 |
| FaqI | GGGAC | 2 cut(s) | 1631, 2475 |
| FauI | CCCGC | 1 cut(s) | 1197 |
| FauNDI | CATATG | 1 cut(s) | 1193 |
| FbaI | TGATCA | 1 cut(s) | 1609 |
| FblI | GTMKAC | 2 cut(s) | 432, 2872 |
| Fnu4HI | GCNGC | 9 cut(s) | 119, 316, 319, 1119, 1751, 2384, 2714, 2957, 2960 |
| Fsp4HI | GCNGC | 9 cut(s) | 119, 316, 319, 1119, 1751, 2384, 2714, 2957, 2960 |
| FspBI | CTAG | 9 cut(s) | 198, 516, 788, 1418, 1755, 2018, 2313, 2387, 3221 |
| FspI | TGCGCA | 1 cut(s) | 2825 |
| GlaI | GCGC | 3 cut(s) | 1274, 2072, 2825 |
| GluI | GCNGC | 9 cut(s) | 119, 316, 319, 1119, 1751, 2384, 2714, 2957, 2960 |
| GsaI | CCCAGC | 1 cut(s) | 117 |
| GsuI | CTGGAG | 1 cut(s) | 2243 |
| HaeII | RGCGCY | 1 cut(s) | 1276 |
| HaeIII | GGCC | 2 cut(s) | 548, 3259 |
| HapII | CCGG | 6 cut(s) | 72, 77, 1518, 2502, 3085, 3154 |
| HgaI | GACGC | 2 cut(s) | 537, 1913 |
| HhaI | GCGC | 3 cut(s) | 1275, 2073, 2826 |
| Hin6I | GCGC | 3 cut(s) | 1273, 2071, 2824 |
| HinP1I | GCGC | 3 cut(s) | 1273, 2071, 2824 |
| HincII | GTYRAC | 2 cut(s) | 85, 433 |
| HindII | GTYRAC | 2 cut(s) | 85, 433 |
| HindIII | AAGCTT | 3 cut(s) | 1700, 2471, 2531 |
| HpaII | CCGG | 6 cut(s) | 72, 77, 1518, 2502, 3085, 3154 |
| HphI | GGTGA | 5 cut(s) | 2045, 2195, 2251, 2446, 3034 |
| Hpy166II | GTNNAC | 5 cut(s) | 85, 433, 1836, 2873, 2924 |
| Hpy8I | GTNNAC | 5 cut(s) | 85, 433, 1836, 2873, 2924 |
| Hpy99I | CGWCG | 3 cut(s) | 437, 1066, 1929 |
| HpyCH4III | ACNGT | 7 cut(s) | 1289, 1600, 1874, 2760, 2820, 2858, 3057 |
| HpyCH4IV | ACGT | 3 cut(s) | 943, 1144, 3229 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 220, 650, 1578, 1783, 2722, 2830 |
| HpySE526I | ACGT | 3 cut(s) | 943, 1144, 3229 |
| HspAI | GCGC | 3 cut(s) | 1273, 2071, 2824 |
| Kpn2I | TCCGGA | 1 cut(s) | 1517 |
| KpnI | GGTACC | 2 cut(s) | 975, 1738 |
| Ksp22I | TGATCA | 1 cut(s) | 1609 |
| LmnI | GCTCC | 2 cut(s) | 23, 126 |
| Lsp1109I | GCAGC | 6 cut(s) | 105, 327, 1105, 1737, 2395, 2943 |
| LweI | GCATC | 7 cut(s) | 160, 1786, 1950, 2110, 2152, 2647, 2835 |
| MaeI | CTAG | 9 cut(s) | 198, 516, 788, 1418, 1755, 2018, 2313, 2387, 3221 |
| MaeII | ACGT | 3 cut(s) | 943, 1144, 3229 |
| MaeIII | GTNAC | 8 cut(s) | 757, 773, 934, 1667, 1818, 2113, 2183, 2497 |
| MfeI | CAATTG | 3 cut(s) | 606, 1809, 3063 |
| MflI | RGATCY | 6 cut(s) | 784, 1057, 1354, 1987, 2085, 2935 |
| MhlI | GDGCHC | 1 cut(s) | 2282 |
| MlyI | GAGTC | 9 cut(s) | 210, 336, 521, 678, 1101, 1544, 1585, 2680, 2691 |
| MmeI | TCCRAC | 6 cut(s) | 237, 1518, 1848, 2257, 2280, 2793 |
| Mph1103I | ATGCAT | 1 cut(s) | 1485 |
| MroI | TCCGGA | 1 cut(s) | 1517 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2784 |
| MslI | CAYNNNNRTG | 3 cut(s) | 246, 1743, 2148 |
| MspA1I | CMGCKG | 1 cut(s) | 113 |
| MspI | CCGG | 6 cut(s) | 72, 77, 1518, 2502, 3085, 3154 |
| MspR9I | CCNGG | 3 cut(s) | 394, 2292, 2503 |
| MunI | CAATTG | 3 cut(s) | 606, 1809, 3063 |
| Mva1269I | GAATGC | 1 cut(s) | 2507 |
| MvaI | CCWGG | 2 cut(s) | 394, 2292 |
| MvnI | CGCG | 2 cut(s) | 531, 2073 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 220, 650, 1578, 1783, 2722, 2830 |
| NciI | CCSGG | 1 cut(s) | 2503 |
| NdeI | CATATG | 1 cut(s) | 1193 |
| NheI | GCTAGC | 1 cut(s) | 2386 |
| NlaIV | GGNNCC | 4 cut(s) | 390, 973, 1736, 2446 |
| NmuCI | GTSAC | 5 cut(s) | 757, 934, 1667, 2113, 2183 |
| NsbI | TGCGCA | 1 cut(s) | 2825 |
| NsiI | ATGCAT | 1 cut(s) | 1485 |
| NspI | RCATGY | 4 cut(s) | 796, 1040, 2114, 2725 |
| NspV | TTCGAA | 1 cut(s) | 3011 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 657 |
| PctI | GAATGC | 1 cut(s) | 2507 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2784 |
| PfeI | GAWTC | 5 cut(s) | 305, 2461, 2567, 2780, 2895 |
| PflFI | GACNNNGTC | 1 cut(s) | 668 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3170 |
| PkrI | GCNGC | 9 cut(s) | 120, 317, 320, 1120, 1752, 2385, 2715, 2958, 2961 |
| PleI | GAGTC | 9 cut(s) | 209, 336, 520, 677, 1101, 1544, 1584, 2679, 2690 |
| PmaCI | CACGTG | 1 cut(s) | 944 |
| PmlI | CACGTG | 1 cut(s) | 944 |
| PpsI | GAGTC | 9 cut(s) | 209, 336, 520, 677, 1101, 1544, 1584, 2679, 2690 |
| Ppu21I | YACGTR | 1 cut(s) | 944 |
| PpuMI | RGGWCCY | 1 cut(s) | 1647 |
| PshAI | GACNNNNGTC | 1 cut(s) | 381 |
| PshBI | ATTAAT | 2 cut(s) | 1913, 2424 |
| Psp1406I | AACGTT | 1 cut(s) | 3229 |
| Psp5II | RGGWCCY | 1 cut(s) | 1647 |
| Psp6I | CCWGG | 2 cut(s) | 392, 2290 |
| PspCI | CACGTG | 1 cut(s) | 944 |
| PspEI | GGTNACC | 1 cut(s) | 2497 |
| PspFI | CCCAGC | 1 cut(s) | 113 |
| PspGI | CCWGG | 2 cut(s) | 392, 2290 |
| PspN4I | GGNNCC | 4 cut(s) | 390, 973, 1736, 2446 |
| PspPI | GGNCC | 3 cut(s) | 74, 1647, 3258 |
| PspPPI | RGGWCCY | 1 cut(s) | 1647 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 381, 413 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2344 |
| PsuI | RGATCY | 6 cut(s) | 784, 1057, 1354, 1987, 2085, 2935 |
| PsyI | GACNNNGTC | 1 cut(s) | 668 |
| RsaI | GTAC | 5 cut(s) | 973, 1557, 1736, 1837, 3131 |
| RsaNI | GTAC | 5 cut(s) | 972, 1556, 1735, 1836, 3130 |
| RseI | CAYNNNNRTG | 3 cut(s) | 246, 1743, 2148 |
| Rsr2I | CGGWCCG | 1 cut(s) | 74 |
| RsrII | CGGWCCG | 1 cut(s) | 74 |
| SalI | GTCGAC | 1 cut(s) | 431 |
| SatI | GCNGC | 9 cut(s) | 119, 316, 319, 1119, 1751, 2384, 2714, 2957, 2960 |
| Sau96I | GGNCC | 3 cut(s) | 74, 1647, 3258 |
| ScaI | AGTACT | 1 cut(s) | 1557 |
| SchI | GAGTC | 9 cut(s) | 210, 336, 521, 678, 1101, 1544, 1585, 2680, 2691 |
| ScrFI | CCNGG | 3 cut(s) | 394, 2292, 2503 |
| SduI | GDGCHC | 1 cut(s) | 2282 |
| SfaNI | GCATC | 7 cut(s) | 160, 1786, 1950, 2110, 2152, 2647, 2835 |
| SfuI | TTCGAA | 1 cut(s) | 3011 |
| SinI | GGWCC | 2 cut(s) | 74, 1647 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 246, 1743, 2148 |
| SmlI | CTYRAG | 6 cut(s) | 344, 889, 1302, 1463, 2405, 2668 |
| SmoI | CTYRAG | 6 cut(s) | 344, 889, 1302, 1463, 2405, 2668 |
| SsiI | CCGC | 9 cut(s) | 111, 319, 569, 755, 1204, 2073, 2602, 2714, 2960 |
| SspI | AATATT | 1 cut(s) | 1179 |
| SspMI | CTAG | 9 cut(s) | 198, 516, 788, 1418, 1755, 2018, 2313, 2387, 3221 |
| StyD4I | CCNGG | 3 cut(s) | 392, 2290, 2501 |
| StyI | CCWWGG | 1 cut(s) | 1967 |
| TaaI | ACNGT | 7 cut(s) | 1289, 1600, 1874, 2760, 2820, 2858, 3057 |
| TaiI | ACGT | 3 cut(s) | 946, 1147, 3232 |
| TaqI | TCGA | 7 cut(s) | 165, 432, 1373, 2196, 2266, 2973, 3011 |
| TatI | WGTACW | 3 cut(s) | 1555, 1835, 3129 |
| TauI | GCSGC | 3 cut(s) | 321, 2716, 2962 |
| TfiI | GAWTC | 5 cut(s) | 305, 2461, 2567, 2780, 2895 |
| TscAI | CASTG | 1 cut(s) | 2035 |
| TseFI | GTSAC | 5 cut(s) | 757, 934, 1667, 2113, 2183 |
| TseI | GCWGC | 6 cut(s) | 118, 315, 1118, 1750, 2383, 2956 |
| Tsp45I | GTSAC | 5 cut(s) | 757, 934, 1667, 2113, 2183 |
| TspGWI | ACGGA | 2 cut(s) | 450, 1050 |
| TspRI | CASTG | 1 cut(s) | 2035 |
| Tth111I | GACNNNGTC | 1 cut(s) | 668 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3170 |
| VpaK11BI | GGWCC | 2 cut(s) | 74, 1647 |
| VspI | ATTAAT | 2 cut(s) | 1913, 2424 |
| XapI | RAATTY | 5 cut(s) | 371, 716, 833, 868, 2626 |
| XbaI | TCTAGA | 2 cut(s) | 197, 787 |
| XceI | RCATGY | 4 cut(s) | 796, 1040, 2114, 2725 |
| XmiI | GTMKAC | 2 cut(s) | 432, 2872 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2784 |
| XspI | CTAG | 9 cut(s) | 198, 516, 788, 1418, 1755, 2018, 2313, 2387, 3221 |
| ZrmI | AGTACT | 1 cut(s) | 1557 |
| Zsp2I | ATGCAT | 1 cut(s) | 1485 |