Rmu_sc0016836.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016836.1
Physical Location & Seq
Reverse (-)
3795 .. 7217
3423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016836.1_g000001.1.cds

Sequence Viewer

Length: 3144 bp
atggctctggtccgaggtcacaaggcctccctttccagatataccacttctccttatccatttaggtatcacgtattcttgagctttagaggtgaagacacacgaaagaacttcgctgatcacctctacactgcccttgtcaatgccggatttcatactttccgggatgacggactcgagaaaggggagaatatcaagcaagagattgagaatgccattcgagagtcacgaacttctgtcattgtgttttcgaaagactacgcctcttccatatggtgtctggaggagcttgtcacgatccttgaacgcaagaggacctccaatcatttcgttttaccagtcttctacgacgttgatccatcccatctgaggaaccagactgcaagtgttgcagaaacacttactagacaccagaaaactcaatcgtcgagtaaagtgagaagatggcgggcagcacttaaacaagttgcagatctagcaggaatgaatttacaaaatgaagctgacgggcatgagtcaaagtttatccagaagattgttggagtgattcatgacaagctaggtcgtgtccccctaagcgatgtccagaaggaattagaggataagttgttatctgttaaccctgttcttgatgacgccgaggggaagcaactgaaattccaaacgactgtgaagccatggctccagaagcttaaagaggctgtctatgaggctgaggacctgttgcaggagatcaaaacgcgagtgttgaggcaaaagaagaatgacaaatatgggagtagcaccagtaaggtacaagagctcatctctactccatctcatgcttttgactcagctttaatatactccagggtagatgaagttcttgaaaaactagacaacatttcgaagcagacaaaagatgtccttgattcggaaataaccactggacacagagtatcacaaccactgccgtcaatttctttggtcgaaaactctgtgtatggaagagatgaagagaaagaaagattcgttaaattattgctatcagatgatgagactggcaatgaaacaggtgtgattcctattgtgggtatgggtgggatcggaaagaccacccttgcccagtttgtatacaacgatgttagagtgaagcaacattttcacctacaagcatgggtatgtgtttcaaaagaatttgatgtttttaggatctcgcaacacatttatgagtccctcacctcagaagcttgccaaagcacaaacctagatctgcttctatcaaagttgcaggcaactttgagggggaaaaggttcttctttgttcttgatgacatctggaacaagaattataaccagttggaactcttaaggcgtccccttgagtctggagcacatggaagcaagatcattgtcacaacacgagatgaaaatgttgcacgtatgatgggtagccttaaagctcacagtctcatgccaatgtctgaggaagatagctggtcgttatttgaaaaacatgccttgaaaaatggaggtgttcctacacactcacatcttgaaaaaatcggtagacaaattgttcgaaagtgcaatggtcttcctttggctattaagtcccttgggggtctcttatgttctaaattaactgtgggggaatgggaaagtattttgaatagtgagatgtgggacttgccacaggaggagagtgacattctgccatctctttggttgagctacaagcatctgcctgcacatctcaggcgttgttttgcatattgttcgatatttcccaagaactatgcgttcaaaacatcaacattggttttgttgtggaaggctgtagatctattgcaacctaaaaaaatcaaaatggcagaagaaatcggaaaagactacatcaatgatctatactcaaggtgggagggcagtgattcacccaacattttgagcaagactcgtcatttttcatatatgctggaatattatgatgaggctgatggcttagagatgtttgaggctttacagcgagctaaaagtttgcgcacctttctaccattacaatgttcaagttatgagaggtcgaaactgttgggcaaaggacttgagttattgtcaaaattacaatatttaagagcactcacgttatcagggcacgatactgaagaattgcctgattcaattaacaatttgaaacaacttaggtacttggacttgtcttcgacacctatcaaaaagttacctgatagaatttatactctgtataacttgcaagtgttgttgtcacgttgttctgctcttactgaactgccagccaacttgggaagattgatcaacttgagccatctggatacttttggtacaataaggttaaagaagatgccacctcttatgggcaatttgaaagacctccagattttaactgtatttgtggtagacaagcacactgcacgggataatttgctagagttgaagaagcttcaaaatttgcgcggaagcctttgtatttcagggcttggtgatgttgtgcatggcagcgctttggaggcccacattctgaggaacaagaagtttcttagttatctagttttgaattggggaggaaggcatgttagtgaagtaggcaataatactgtagacgaaatagaagtgcttgagaagctccaacctcacccgaaccttaaaaaccttagagttacagattatggaggcagactgtttccaggttggtcaggatattatacttccttgacaccaagaaaagctctagtttctcttgaaattgttgattgtgtgaattgtgtctccttgccactattgggacagctaccttgcctcagagagcttgatatttctgggttacatggagtgctgtccattggttccgagttttattatggtgacaatactactcgtgcaaacagaccatttagatctctacaatcgttgagattctatgatatgagcgggtggcaagaatggtgtcatgttggaggtgaggaggatgaaggtggggtttttcctagtcttgttcagctttatgtatcagactgtcctaatctttccgggagattagcattagacagcttcccgatgctaaaagaggtcgacttgatcaggactaacctatccctagtcaccaggtcacggactctaaattatccctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1047

Amino Acids

119.0

Weight (kDa)

8.14

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1332
Acc16I TGCGCA 1 cut(s) 2021
AccBSI CCGCTC 1 cut(s) 2943
AccI GTMKAC 5 cut(s) 1113, 1549, 2412, 2613, 3084
AccII CGCG 2 cut(s) 742, 2469
AciI CCGC 3 cut(s) 448, 2469, 2943
AclWI GGATC 4 cut(s) 292, 350, 1091, 1199
AcsI RAATTY 5 cut(s) 487, 656, 1175, 2226, 2461
AcuI CTGAAG 1 cut(s) 2160
AcyI GRCGYC 2 cut(s) 636, 1354
AfaI GTAC 3 cut(s) 795, 2183, 2338
AfeI AGCGCT 1 cut(s) 2515
AfiI CCNNNNNNNGG 7 cut(s) 369, 727, 913, 1070, 2369, 2795, 3123
AflII CTTAAG 1 cut(s) 1348
AjnI CCWGG 3 cut(s) 848, 2698, 3116
Alw21I GWGCWC 3 cut(s) 804, 1375, 2116
Alw26I GTCTC 4 cut(s) 1031, 1454, 1610, 2785
AlwI GGATC 4 cut(s) 292, 350, 1091, 1199
Ama87I CYCGRG 1 cut(s) 176
Aor51HI AGCGCT 1 cut(s) 2515
AoxI GGCC 2 cut(s) 24, 2523
ApeKI GCWGC 2 cut(s) 452, 2511
ApoI RAATTY 5 cut(s) 487, 656, 1175, 2226, 2461
ArsI GACNNNNNNTTYG 2 cut(s) 1542, 1574
Asp700I GAANNNNTTC 1 cut(s) 1292
AspLEI GCGC 3 cut(s) 2022, 2469, 2516
AspS9I GGNCC 4 cut(s) 10, 315, 718, 2524
AsuC2I CCSGG 2 cut(s) 164, 3043
AsuII TTCGAA 3 cut(s) 251, 887, 1561
AvaI CYCGRG 1 cut(s) 176
AvaII GGWCC 3 cut(s) 10, 315, 718
BaeGI GKGCMC 1 cut(s) 2133
BanII GRGCYC 1 cut(s) 804
BauI CACGAG 2 cut(s) 1401, 2889
BbsI GAAGAC 4 cut(s) 102, 334, 1568, 2187
Bbv12I GWGCWC 3 cut(s) 804, 1375, 2116
BbvCI CCTCAGC 1 cut(s) 714
BbvI GCAGC 2 cut(s) 464, 2523
BccI CCATC 8 cut(s) 367, 372, 438, 823, 1420, 1705, 1970, 2328
BceAI ACGGC 1 cut(s) 937
BcgI CGANNNNNNTGC 2 cut(s) 1740, 1774
BciT130I CCWGG 3 cut(s) 850, 2700, 3118
BciVI GTATCC 1 cut(s) 2320
BclI TGATCA 3 cut(s) 118, 2307, 3090
BcnI CCSGG 2 cut(s) 164, 3043
BcoDI GTCTC 4 cut(s) 1031, 1454, 1610, 2785
BfmI CTRYAG 2 cut(s) 1818, 2610
BfoI RGCGCY 1 cut(s) 2517
BfrI CTTAAG 1 cut(s) 1348
BfuI GTATCC 1 cut(s) 2320
BglII AGATCT 4 cut(s) 472, 1249, 1822, 2909
BisI GCNGC 2 cut(s) 453, 2512
BlsI GCNGC 2 cut(s) 454, 2513
Bme1390I CCNGG 5 cut(s) 164, 850, 2700, 3043, 3118
Bme18I GGWCC 3 cut(s) 10, 315, 718
BmeT110I CYCGRG 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 10, 315, 718, 2524
BmiI GGNNCC 3 cut(s) 374, 683, 2860
BmrFI CCNGG 5 cut(s) 164, 850, 2700, 3043, 3118
BmrI ACTGGG 1 cut(s) 1099
BmsI GCATC 3 cut(s) 1729, 2346, 3060
BmuI ACTGGG 1 cut(s) 1099
BpiI GAAGAC 4 cut(s) 102, 334, 1568, 2187
BplI GAGNNNNNCTC 4 cut(s) 791, 823, 1918, 1950
BpmI CTGGAG 5 cut(s) 302, 668, 832, 1389, 2372
Bpu10I CCTNAGC 2 cut(s) 575, 714
Bpu14I TTCGAA 3 cut(s) 251, 887, 1561
BpuEI CTTGAG 6 cut(s) 100, 1382, 1876, 2102, 2335, 2651
BpuMI CCSGG 2 cut(s) 164, 3043
BsaAI YACGTR 2 cut(s) 73, 1421
BsaHI GRCGYC 2 cut(s) 636, 1354
BsaI GGTCTC 1 cut(s) 1610
BsaJI CCNNGG 5 cut(s) 13, 639, 677, 849, 1597
BsaXI ACNNNNNCTCC 4 cut(s) 11, 34, 41, 64
Bsc4I CCNNNNNNNGG 7 cut(s) 369, 727, 913, 1070, 2369, 2795, 3123
Bse1I ACTGG 6 cut(s) 338, 786, 931, 1045, 1105, 1336
Bse3DI GCAATG 2 cut(s) 1051, 1576
BseBI CCWGG 3 cut(s) 850, 2700, 3118
BseDI CCNNGG 5 cut(s) 13, 639, 677, 849, 1597
BseGI GGATG 3 cut(s) 172, 359, 2986
BseLI CCNNNNNNNGG 7 cut(s) 369, 727, 913, 1070, 2369, 2795, 3123
BseMI GCAATG 2 cut(s) 1051, 1576
BseMII CTCAG 8 cut(s) 359, 705, 846, 1236, 1455, 1750, 2525, 2827
BseNI ACTGG 6 cut(s) 338, 786, 931, 1045, 1105, 1336
BseRI GAGGAG 3 cut(s) 299, 1694, 2990
BseSI GKGCMC 1 cut(s) 2133
BseXI GCAGC 2 cut(s) 464, 2523
BsgI GTGCAG 2 cut(s) 1713, 2409
Bsh1236I CGCG 2 cut(s) 742, 2469
BshFI GGCC 2 cut(s) 26, 2525
BsiHKAI GWGCWC 3 cut(s) 804, 1375, 2116
BsiHKCI CYCGRG 1 cut(s) 176
BsiSI CCGG 3 cut(s) 147, 163, 3042
BslFI GGGAC 6 cut(s) 554, 1198, 1341, 1579, 1679, 2811
BslI CCNNNNNNNGG 7 cut(s) 369, 727, 913, 1070, 2369, 2795, 3123
BsmAI GTCTC 4 cut(s) 1031, 1454, 1610, 2785
BsmFI GGGAC 6 cut(s) 554, 1198, 1341, 1579, 1679, 2811
BsmI GAATGC 1 cut(s) 217
BsnI GGCC 2 cut(s) 26, 2525
Bso31I GGTCTC 1 cut(s) 1610
BsoBI CYCGRG 1 cut(s) 176
Bsp119I TTCGAA 3 cut(s) 251, 887, 1561
Bsp1286I GDGCHC 4 cut(s) 804, 1375, 2116, 2133
Bsp19I CCATGG 1 cut(s) 677
BspACI CCGC 3 cut(s) 448, 2469, 2943
BspANI GGCC 2 cut(s) 26, 2525
BspCNI CTCAG 8 cut(s) 360, 706, 845, 1235, 1456, 1749, 2526, 2826
BspFNI CGCG 2 cut(s) 742, 2469
BspHI TCATGA 1 cut(s) 550
BspLI GGNNCC 3 cut(s) 374, 683, 2860
BspPI GGATC 4 cut(s) 292, 350, 1091, 1199
BspT104I TTCGAA 3 cut(s) 251, 887, 1561
BspTI CTTAAG 1 cut(s) 1348
BspTNI GGTCTC 1 cut(s) 1610
BsrBI CCGCTC 1 cut(s) 2943
BsrDI GCAATG 2 cut(s) 1051, 1576
BsrI ACTGG 6 cut(s) 338, 786, 931, 1045, 1105, 1336
BssECI CCNNGG 5 cut(s) 13, 639, 677, 849, 1597
BssNAI GTATAC 1 cut(s) 1114
BssNI GRCGYC 2 cut(s) 636, 1354
BssSI CACGAG 2 cut(s) 1401, 2889
BssT1I CCWWGG 2 cut(s) 677, 1597
Bst1107I GTATAC 1 cut(s) 1114
Bst2BI CACGAG 2 cut(s) 1401, 2889
Bst2UI CCWGG 3 cut(s) 850, 2700, 3118
Bst4CI ACNGT 8 cut(s) 670, 1448, 1627, 2067, 2401, 2611, 2694, 3029
Bst6I CTCTTC 3 cut(s) 271, 982, 990
BstACI GRCGYC 2 cut(s) 636, 1354
BstAFI CTTAAG 1 cut(s) 1348
BstAPI GCANNNNNTGC 1 cut(s) 389
BstBAI YACGTR 2 cut(s) 73, 1421
BstBI TTCGAA 3 cut(s) 251, 887, 1561
BstC8I GCNNGC 6 cut(s) 450, 1231, 1272, 1728, 2007, 2289
BstDSI CCRYGG 1 cut(s) 677
BstENI CCTNNNNNAGG 1 cut(s) 725
BstF5I GGATG 3 cut(s) 172, 359, 2986
BstFNI CGCG 2 cut(s) 742, 2469
BstH2I RGCGCY 1 cut(s) 2517
BstHHI GCGC 3 cut(s) 2022, 2469, 2516
BstMAI GTCTC 4 cut(s) 1031, 1454, 1610, 2785
BstMWI GCNNNNNNNGC 5 cut(s) 389, 476, 688, 2522, 2635
BstNI CCWGG 3 cut(s) 850, 2700, 3118
BstNSI RCATGY 2 cut(s) 1499, 2588
BstSCI CCNGG 5 cut(s) 162, 848, 2698, 3041, 3116
BstSFI CTRYAG 2 cut(s) 1818, 2610
BstSLI GKGCMC 1 cut(s) 2133
BstUI CGCG 2 cut(s) 742, 2469
BstV1I GCAGC 2 cut(s) 464, 2523
BstV2I GAAGAC 4 cut(s) 102, 334, 1568, 2187
BstX2I RGATCY 5 cut(s) 472, 1191, 1249, 1822, 2909
BstXI CCANNNNNNTGG 1 cut(s) 1704
BstYI RGATCY 5 cut(s) 472, 1191, 1249, 1822, 2909
BstZ17I GTATAC 1 cut(s) 1114
BsuI GTATCC 1 cut(s) 2320
BsuRI GGCC 2 cut(s) 26, 2525
BtgI CCRYGG 1 cut(s) 677
BtgZI GCGATG 1 cut(s) 594
BtsCI GGATG 3 cut(s) 172, 359, 2986
BtsI GCAGTG 4 cut(s) 129, 947, 1912, 2421
BtsIMutI CAGTG 5 cut(s) 129, 924, 947, 1912, 2421
Cac8I GCNNGC 6 cut(s) 450, 1231, 1272, 1728, 2007, 2289
CciI TCATGA 1 cut(s) 550
CfoI GCGC 3 cut(s) 2022, 2469, 2516
Cfr13I GGNCC 4 cut(s) 10, 315, 718, 2524
CseI GACGC 2 cut(s) 644, 1343
CsiI ACCWGGT 1 cut(s) 3116
Csp6I GTAC 3 cut(s) 794, 2182, 2337
CviQI GTAC 3 cut(s) 794, 2182, 2337
Eam1104I CTCTTC 3 cut(s) 271, 982, 990
EarI CTCTTC 3 cut(s) 271, 982, 990
Ecl136II GAGCTC 1 cut(s) 802
Eco130I CCWWGG 2 cut(s) 677, 1597
Eco147I AGGCCT 1 cut(s) 26
Eco24I GRGCYC 1 cut(s) 804
Eco31I GGTCTC 1 cut(s) 1610
Eco47I GGWCC 3 cut(s) 10, 315, 718
Eco47III AGCGCT 1 cut(s) 2515
Eco53kI GAGCTC 1 cut(s) 802
Eco57I CTGAAG 1 cut(s) 2160
Eco88I CYCGRG 1 cut(s) 176
EcoICRI GAGCTC 1 cut(s) 802
EcoNI CCTNNNNNAGG 1 cut(s) 725
EcoO109I RGGNCCY 2 cut(s) 315, 718
EcoRII CCWGG 3 cut(s) 848, 2698, 3116
EcoT14I CCWWGG 2 cut(s) 677, 1597
EcoT38I GRGCYC 1 cut(s) 804
ErhI CCWWGG 2 cut(s) 677, 1597
FalI AAGNNNNNCTT 2 cut(s) 891, 923
FaqI GGGAC 6 cut(s) 554, 1198, 1341, 1579, 1679, 2811
FauI CCCGC 2 cut(s) 441, 2936
FauNDI CATATG 1 cut(s) 272
FbaI TGATCA 3 cut(s) 118, 2307, 3090
FblI GTMKAC 5 cut(s) 1113, 1549, 2412, 2613, 3084
Fnu4HI GCNGC 2 cut(s) 453, 2512
FokI GGATG 3 cut(s) 179, 346, 2993
FriOI GRGCYC 1 cut(s) 804
Fsp4HI GCNGC 2 cut(s) 453, 2512
FspI TGCGCA 1 cut(s) 2021
GlaI GCGC 3 cut(s) 2021, 2468, 2515
GluI GCNGC 2 cut(s) 453, 2512
GsuI CTGGAG 5 cut(s) 302, 668, 832, 1389, 2372
HaeII RGCGCY 1 cut(s) 2517
HaeIII GGCC 2 cut(s) 26, 2525
HapII CCGG 3 cut(s) 147, 163, 3042
HgaI GACGC 2 cut(s) 644, 1343
HhaI GCGC 3 cut(s) 2022, 2469, 2516
Hin1I GRCGYC 2 cut(s) 636, 1354
Hin6I GCGC 3 cut(s) 2020, 2467, 2514
HinP1I GCGC 3 cut(s) 2020, 2467, 2514
HincII GTYRAC 2 cut(s) 619, 3085
HindII GTYRAC 2 cut(s) 619, 3085
HindIII AAGCTT 3 cut(s) 689, 1227, 2453
HpaI GTTAAC 1 cut(s) 619
HpaII CCGG 3 cut(s) 147, 163, 3042
Hpy166II GTNNAC 6 cut(s) 619, 1114, 1550, 2413, 2614, 3085
Hpy8I GTNNAC 6 cut(s) 619, 1114, 1550, 2413, 2614, 3085
Hpy99I CGWCG 2 cut(s) 353, 430
HpyAV CCTTC 4 cut(s) 583, 1807, 2574, 2978
HpyCH4III ACNGT 8 cut(s) 670, 1448, 1627, 2067, 2401, 2611, 2694, 3029
HpyCH4IV ACGT 5 cut(s) 72, 351, 1420, 2120, 2263
HpyF10VI GCNNNNNNNGC 5 cut(s) 389, 476, 688, 2522, 2635
HpySE526I ACGT 5 cut(s) 72, 351, 1420, 2120, 2263
Hsp92I GRCGYC 2 cut(s) 636, 1354
HspAI GCGC 3 cut(s) 2020, 2467, 2514
Ksp22I TGATCA 3 cut(s) 118, 2307, 3090
KspAI GTTAAC 1 cut(s) 619
LmnI GCTCC 4 cut(s) 286, 687, 1370, 2643
Lsp1109I GCAGC 2 cut(s) 464, 2523
LweI GCATC 3 cut(s) 1729, 2346, 3060
MabI ACCWGGT 1 cut(s) 3116
MaeII ACGT 5 cut(s) 72, 351, 1420, 2120, 2263
MbiI CCGCTC 1 cut(s) 2943
MflI RGATCY 5 cut(s) 472, 1191, 1249, 1822, 2909
MhlI GDGCHC 4 cut(s) 804, 1375, 2116, 2133
MlyI GAGTC 8 cut(s) 168, 233, 524, 824, 1220, 1373, 1927, 3121
MmeI TCCRAC 4 cut(s) 520, 1320, 2665, 2947
MroXI GAANNNNTTC 1 cut(s) 1292
MslI CAYNNNNRTG 5 cut(s) 1159, 1206, 1457, 2038, 2589
MspCI CTTAAG 1 cut(s) 1348
MspI CCGG 3 cut(s) 147, 163, 3042
MspR9I CCNGG 5 cut(s) 164, 850, 2700, 3043, 3118
Mva1269I GAATGC 1 cut(s) 217
MvaI CCWGG 3 cut(s) 850, 2700, 3118
MvnI CGCG 2 cut(s) 742, 2469
MwoI GCNNNNNNNGC 5 cut(s) 389, 476, 688, 2522, 2635
NciI CCSGG 2 cut(s) 164, 3043
NcoI CCATGG 1 cut(s) 677
NdeI CATATG 1 cut(s) 272
NlaIV GGNNCC 3 cut(s) 374, 683, 2860
NmeAIII GCCGAG 1 cut(s) 664
NmuCI GTSAC 9 cut(s) 17, 225, 292, 1393, 1685, 2259, 2876, 3112, 3120
NsbI TGCGCA 1 cut(s) 2021
NspI RCATGY 2 cut(s) 1499, 2588
NspV TTCGAA 3 cut(s) 251, 887, 1561
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 550
PceI AGGCCT 1 cut(s) 26
PcsI WCGNNNNNNNCGW 1 cut(s) 226
PctI GAATGC 1 cut(s) 217
PdmI GAANNNNTTC 1 cut(s) 1292
PfeI GAWTC 7 cut(s) 547, 911, 1008, 1060, 1910, 2153, 2928
PfoI TCCNGGA 2 cut(s) 162, 3041
PkrI GCNGC 2 cut(s) 454, 2513
PleI GAGTC 8 cut(s) 168, 232, 523, 824, 1219, 1372, 1927, 3121
PpsI GAGTC 8 cut(s) 168, 232, 523, 824, 1219, 1372, 1927, 3121
Ppu21I YACGTR 2 cut(s) 73, 1421
PpuMI RGGWCCY 2 cut(s) 315, 718
PsiI TTATAA 1 cut(s) 1332
Psp124BI GAGCTC 1 cut(s) 804
Psp5II RGGWCCY 2 cut(s) 315, 718
Psp6I CCWGG 3 cut(s) 848, 2698, 3116
PspGI CCWGG 3 cut(s) 848, 2698, 3116
PspN4I GGNNCC 3 cut(s) 374, 683, 2860
PspPI GGNCC 4 cut(s) 10, 315, 718, 2524
PspPPI RGGWCCY 2 cut(s) 315, 718
PsrI GAACNNNNNNTAC 2 cut(s) 846, 878
PsuI RGATCY 5 cut(s) 472, 1191, 1249, 1822, 2909
RsaI GTAC 3 cut(s) 795, 2183, 2338
RsaNI GTAC 3 cut(s) 794, 2182, 2337
RseI CAYNNNNRTG 5 cut(s) 1159, 1206, 1457, 2038, 2589
SacI GAGCTC 1 cut(s) 804
SalI GTCGAC 1 cut(s) 3083
SatI GCNGC 2 cut(s) 453, 2512
Sau96I GGNCC 4 cut(s) 10, 315, 718, 2524
SchI GAGTC 8 cut(s) 168, 233, 524, 824, 1220, 1373, 1927, 3121
ScrFI CCNGG 5 cut(s) 164, 850, 2700, 3043, 3118
SduI GDGCHC 4 cut(s) 804, 1375, 2116, 2133
SexAI ACCWGGT 1 cut(s) 3116
SfaNI GCATC 3 cut(s) 1729, 2346, 3060
SfcI CTRYAG 2 cut(s) 1818, 2610
Sfr274I CTCGAG 1 cut(s) 176
SfuI TTCGAA 3 cut(s) 251, 887, 1561
SinI GGWCC 3 cut(s) 10, 315, 718
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 5 cut(s) 1159, 1206, 1457, 2038, 2589
SmlI CTYRAG 8 cut(s) 79, 176, 1348, 1361, 1891, 2081, 2314, 2630
SmoI CTYRAG 8 cut(s) 79, 176, 1348, 1361, 1891, 2081, 2314, 2630
SseBI AGGCCT 1 cut(s) 26
SsiI CCGC 3 cut(s) 448, 2469, 2943
SspI AATATT 2 cut(s) 1961, 2105
SstI GAGCTC 1 cut(s) 804
StuI AGGCCT 1 cut(s) 26
StyD4I CCNGG 5 cut(s) 162, 848, 2698, 3041, 3116
StyI CCWWGG 2 cut(s) 677, 1597
TaaI ACNGT 8 cut(s) 670, 1448, 1627, 2067, 2401, 2611, 2694, 3029
TaiI ACGT 5 cut(s) 75, 354, 1423, 2123, 2266
TfiI GAWTC 7 cut(s) 547, 911, 1008, 1060, 1910, 2153, 2928
TscAI CASTG 5 cut(s) 136, 931, 954, 1912, 2428
TseFI GTSAC 9 cut(s) 17, 225, 292, 1393, 1685, 2259, 2876, 3112, 3120
TseI GCWGC 2 cut(s) 452, 2511
Tsp45I GTSAC 9 cut(s) 17, 225, 292, 1393, 1685, 2259, 2876, 3112, 3120
TspGWI ACGGA 2 cut(s) 186, 3139
TspRI CASTG 5 cut(s) 136, 931, 954, 1912, 2428
Vha464I CTTAAG 1 cut(s) 1348
VpaK11BI GGWCC 3 cut(s) 10, 315, 718
XagI CCTNNNNNAGG 1 cut(s) 725
XapI RAATTY 5 cut(s) 487, 656, 1175, 2226, 2461
XceI RCATGY 2 cut(s) 1499, 2588
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 536
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 5 cut(s) 1113, 1549, 2412, 2613, 3084
XmnI GAANNNNTTC 1 cut(s) 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.