Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 25 - 198 | 7.6e-50 | TIR domain |
| TIR_2 | PF13676 | 27 - 129 | 4.8e-17 | TIR domain |
| Rx_N | PF18052 | 179 - 263 | 7.6e-13 | Rx N-terminal domain |
| NB-ARC | PF00931 | 335 - 507 | 2.2e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 591 - 658 | 3.4e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 732 - 1044 | 4.9e-24 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 854 - 979 | 5.4e-30 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1341 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 299 |
| Acc16I | TGCGCA | 1 cut(s) | 2153 |
| Acc36I | ACCTGC | 1 cut(s) | 2804 |
| AccB1I | GGYRCC | 2 cut(s) | 285, 3687 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 3233, 3626 |
| AccI | GTMKAC | 2 cut(s) | 1122, 1558 |
| AccII | CGCG | 2 cut(s) | 238, 2592 |
| AciI | CCGC | 5 cut(s) | 457, 933, 2592, 2628, 3398 |
| AclI | AACGTT | 1 cut(s) | 1237 |
| AclWI | GGATC | 4 cut(s) | 301, 359, 1208, 3752 |
| AcoI | YGGCCR | 1 cut(s) | 3490 |
| AcsI | RAATTY | 9 cut(s) | 496, 665, 1184, 1352, 1790, 1991, 2557, 2966, 3212 |
| AcuI | CTGAAG | 3 cut(s) | 771, 1848, 3323 |
| AcyI | GRCGYC | 1 cut(s) | 645 |
| AfaI | GTAC | 4 cut(s) | 804, 2255, 2306, 2356 |
| AflII | CTTAAG | 1 cut(s) | 2666 |
| AflIII | ACRYGT | 3 cut(s) | 78, 1668, 3434 |
| AgeI | ACCGGT | 1 cut(s) | 3149 |
| AjiI | CACGTC | 2 cut(s) | 79, 3127 |
| AjnI | CCWGG | 5 cut(s) | 168, 857, 915, 2608, 2769 |
| Alw21I | GWGCWC | 3 cut(s) | 1534, 2241, 2622 |
| Alw26I | GTCTC | 9 cut(s) | 1040, 1619, 2322, 3176, 3323, 3348, 3443, 3458, 3692 |
| Alw44I | GTGCAC | 2 cut(s) | 1530, 2618 |
| AlwI | GGATC | 4 cut(s) | 301, 359, 1208, 3752 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 3273, 3307 |
| Ama87I | CYCGRG | 1 cut(s) | 3440 |
| AoxI | GGCC | 8 cut(s) | 24, 138, 222, 708, 1463, 2637, 3490, 3713 |
| ApaLI | GTGCAC | 2 cut(s) | 1530, 2618 |
| ApeKI | GCWGC | 5 cut(s) | 461, 1520, 2105, 2410, 2625 |
| ApoI | RAATTY | 9 cut(s) | 496, 665, 1184, 1352, 1790, 1991, 2557, 2966, 3212 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1551, 1583 |
| AsiGI | ACCGGT | 1 cut(s) | 3149 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1149, 2698, 3222 |
| AspLEI | GCGC | 4 cut(s) | 2154, 2592, 3479, 3538 |
| AspS9I | GGNCC | 5 cut(s) | 139, 324, 727, 2398, 3714 |
| AsuC2I | CCSGG | 1 cut(s) | 2551 |
| AsuII | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| AvaI | CYCGRG | 1 cut(s) | 3440 |
| AvaII | GGWCC | 3 cut(s) | 324, 727, 2398 |
| BaeGI | GKGCMC | 3 cut(s) | 582, 1534, 2622 |
| BalI | TGGCCA | 1 cut(s) | 3492 |
| BanI | GGYRCC | 2 cut(s) | 285, 3687 |
| BanII | GRGCYC | 1 cut(s) | 813 |
| BauI | CACGAG | 1 cut(s) | 793 |
| BbsI | GAAGAC | 3 cut(s) | 108, 343, 1577 |
| Bbv12I | GWGCWC | 3 cut(s) | 1534, 2241, 2622 |
| BbvCI | CCTCAGC | 1 cut(s) | 723 |
| BbvI | GCAGC | 5 cut(s) | 473, 1532, 2092, 2397, 2637 |
| BceAI | ACGGC | 4 cut(s) | 153, 695, 1875, 3435 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3515, 3549 |
| BciT130I | CCWGG | 5 cut(s) | 170, 859, 917, 2610, 2771 |
| BciVI | GTATCC | 1 cut(s) | 2615 |
| BclI | TGATCA | 2 cut(s) | 124, 2433 |
| BcnI | CCSGG | 1 cut(s) | 2551 |
| BcoDI | GTCTC | 9 cut(s) | 1040, 1619, 2322, 3176, 3323, 3348, 3443, 3458, 3692 |
| BfaI | CTAG | 8 cut(s) | 311, 485, 569, 884, 1256, 1727, 2534, 3653 |
| BfmI | CTRYAG | 1 cut(s) | 2724 |
| BfrI | CTTAAG | 1 cut(s) | 2666 |
| BfuAI | ACCTGC | 1 cut(s) | 2804 |
| BfuI | GTATCC | 1 cut(s) | 2615 |
| BglII | AGATCT | 6 cut(s) | 38, 481, 1258, 1729, 1831, 2506 |
| BisI | GCNGC | 5 cut(s) | 462, 1521, 2106, 2411, 2626 |
| BlpI | GCTNAGC | 1 cut(s) | 1452 |
| BlsI | GCNGC | 5 cut(s) | 463, 1522, 2107, 2412, 2627 |
| Bme1390I | CCNGG | 6 cut(s) | 170, 859, 917, 2551, 2610, 2771 |
| Bme18I | GGWCC | 3 cut(s) | 324, 727, 2398 |
| BmeT110I | CYCGRG | 1 cut(s) | 3440 |
| BmgBI | CACGTC | 2 cut(s) | 79, 3127 |
| BmgT120I | GGNCC | 5 cut(s) | 139, 324, 727, 2398, 3714 |
| BmiI | GGNNCC | 5 cut(s) | 287, 692, 2399, 2962, 3689 |
| BmrFI | CCNGG | 6 cut(s) | 170, 859, 917, 2551, 2610, 2771 |
| BmrI | ACTGGG | 1 cut(s) | 1108 |
| BmsI | GCATC | 6 cut(s) | 901, 1379, 1465, 1549, 2469, 2505 |
| BmuI | ACTGGG | 1 cut(s) | 1108 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3470 |
| BpiI | GAAGAC | 3 cut(s) | 108, 343, 1577 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 800, 832, 2026, 2058 |
| BpmI | CTGGAG | 3 cut(s) | 841, 2007, 2495 |
| Bpu10I | CCTNAGC | 2 cut(s) | 584, 723 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1452 |
| Bpu14I | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| BpuEI | CTTGAG | 8 cut(s) | 236, 1391, 1730, 1885, 2225, 2461, 2765, 3698 |
| BpuMI | CCSGG | 1 cut(s) | 2551 |
| Bsa29I | ATCGAT | 1 cut(s) | 1936 |
| BsaAI | YACGTR | 2 cut(s) | 1430, 2304 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2094 |
| BsaHI | GRCGYC | 1 cut(s) | 645 |
| BsaI | GGTCTC | 3 cut(s) | 1619, 3323, 3458 |
| BsaJI | CCNNGG | 8 cut(s) | 648, 686, 858, 915, 1606, 2550, 2608, 2609 |
| BsaWI | WCCGGW | 2 cut(s) | 3149, 3540 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 602, 632, 3156, 3186, 3401, 3431 |
| Bse118I | RCCGGY | 1 cut(s) | 3149 |
| Bse1I | ACTGG | 5 cut(s) | 347, 1054, 1114, 1345, 3241 |
| Bse3DI | GCAATG | 3 cut(s) | 1060, 1585, 3209 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2094 |
| BseBI | CCWGG | 5 cut(s) | 170, 859, 917, 2610, 2771 |
| BseCI | ATCGAT | 1 cut(s) | 1936 |
| BseDI | CCNNGG | 8 cut(s) | 648, 686, 858, 915, 1606, 2550, 2608, 2609 |
| BseGI | GGATG | 7 cut(s) | 458, 534, 1394, 1693, 2124, 2193, 2458 |
| BseJI | GATNNNNATC | 1 cut(s) | 2094 |
| BseMI | GCAATG | 3 cut(s) | 1060, 1585, 3209 |
| BseNI | ACTGG | 5 cut(s) | 347, 1054, 1114, 1345, 3241 |
| BseRI | GAGGAG | 2 cut(s) | 623, 3416 |
| BseSI | GKGCMC | 3 cut(s) | 582, 1534, 2622 |
| BseXI | GCAGC | 5 cut(s) | 473, 1532, 2092, 2397, 2637 |
| BseYI | CCCAGC | 2 cut(s) | 2394, 3422 |
| BsgI | GTGCAG | 1 cut(s) | 1160 |
| Bsh1236I | CGCG | 2 cut(s) | 238, 2592 |
| BshFI | GGCC | 8 cut(s) | 26, 140, 224, 710, 1465, 2639, 3492, 3715 |
| BshNI | GGYRCC | 2 cut(s) | 285, 3687 |
| BshTI | ACCGGT | 1 cut(s) | 3149 |
| BshVI | ATCGAT | 1 cut(s) | 1936 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1534, 2241, 2622 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3440 |
| BsiSI | CCGG | 4 cut(s) | 1685, 2550, 3150, 3541 |
| BslFI | GGGAC | 8 cut(s) | 355, 1207, 1350, 1588, 2411, 2666, 2913, 3123 |
| BsmAI | GTCTC | 9 cut(s) | 1040, 1619, 2322, 3176, 3323, 3348, 3443, 3458, 3692 |
| BsmBI | CGTCTC | 1 cut(s) | 3692 |
| BsmFI | GGGAC | 8 cut(s) | 355, 1207, 1350, 1588, 2411, 2666, 2913, 3123 |
| BsmI | GAATGC | 1 cut(s) | 3292 |
| BsnI | GGCC | 8 cut(s) | 26, 140, 224, 710, 1465, 2639, 3492, 3715 |
| Bso31I | GGTCTC | 3 cut(s) | 1619, 3323, 3458 |
| BsoBI | CYCGRG | 1 cut(s) | 3440 |
| Bsp119I | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| Bsp1286I | GDGCHC | 5 cut(s) | 582, 813, 1534, 2241, 2622 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1452 |
| Bsp19I | CCATGG | 1 cut(s) | 686 |
| Bsp68I | TCGCGA | 1 cut(s) | 238 |
| BspACI | CCGC | 5 cut(s) | 457, 933, 2592, 2628, 3398 |
| BspANI | GGCC | 8 cut(s) | 26, 140, 224, 710, 1465, 2639, 3492, 3715 |
| BspDI | ATCGAT | 1 cut(s) | 1936 |
| BspFNI | CGCG | 2 cut(s) | 238, 2592 |
| BspHI | TCATGA | 3 cut(s) | 303, 2080, 2098 |
| BspLI | GGNNCC | 5 cut(s) | 287, 692, 2399, 2962, 3689 |
| BspMI | ACCTGC | 1 cut(s) | 2804 |
| BspPI | GGATC | 4 cut(s) | 301, 359, 1208, 3752 |
| BspQI | GCTCTTC | 1 cut(s) | 204 |
| BspT104I | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| BspT107I | GGYRCC | 2 cut(s) | 285, 3687 |
| BspTI | CTTAAG | 1 cut(s) | 2666 |
| BspTNI | GGTCTC | 3 cut(s) | 1619, 3323, 3458 |
| BsrDI | GCAATG | 3 cut(s) | 1060, 1585, 3209 |
| BsrFI | RCCGGY | 1 cut(s) | 3149 |
| BsrI | ACTGG | 5 cut(s) | 347, 1054, 1114, 1345, 3241 |
| BssAI | RCCGGY | 1 cut(s) | 3149 |
| BssECI | CCNNGG | 8 cut(s) | 648, 686, 858, 915, 1606, 2550, 2608, 2609 |
| BssNAI | GTATAC | 1 cut(s) | 1123 |
| BssNI | GRCGYC | 1 cut(s) | 645 |
| BssSI | CACGAG | 1 cut(s) | 793 |
| BssT1I | CCWWGG | 2 cut(s) | 686, 1606 |
| Bst1107I | GTATAC | 1 cut(s) | 1123 |
| Bst2BI | CACGAG | 1 cut(s) | 793 |
| Bst2UI | CCWGG | 5 cut(s) | 170, 859, 917, 2610, 2771 |
| Bst6I | CTCTTC | 7 cut(s) | 204, 280, 991, 999, 3342, 3510, 3643 |
| BstACI | GRCGYC | 1 cut(s) | 645 |
| BstAFI | CTTAAG | 1 cut(s) | 2666 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 398 |
| BstBAI | YACGTR | 2 cut(s) | 1430, 2304 |
| BstBI | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| BstC8I | GCNNGC | 9 cut(s) | 459, 1171, 1281, 1975, 2064, 2139, 2373, 2415, 3617 |
| BstDSI | CCRYGG | 1 cut(s) | 686 |
| BstEII | GGTNACC | 1 cut(s) | 2337 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 734 |
| BstF5I | GGATG | 7 cut(s) | 458, 534, 1394, 1693, 2124, 2193, 2458 |
| BstFNI | CGCG | 2 cut(s) | 238, 2592 |
| BstHHI | GCGC | 4 cut(s) | 2154, 2592, 3479, 3538 |
| BstMAI | GTCTC | 9 cut(s) | 1040, 1619, 2322, 3176, 3323, 3348, 3443, 3458, 3692 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 398, 485, 697, 1462, 1529, 3412, 3616 |
| BstNI | CCWGG | 5 cut(s) | 170, 859, 917, 2610, 2771 |
| BstNSI | RCATGY | 4 cut(s) | 1508, 1672, 2070, 3438 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3470 |
| BstPI | GGTNACC | 1 cut(s) | 2337 |
| BstSCI | CCNGG | 6 cut(s) | 168, 857, 915, 2549, 2608, 2769 |
| BstSFI | CTRYAG | 1 cut(s) | 2724 |
| BstSLI | GKGCMC | 3 cut(s) | 582, 1534, 2622 |
| BstSNI | TACGTA | 1 cut(s) | 2304 |
| BstUI | CGCG | 2 cut(s) | 238, 2592 |
| BstV1I | GCAGC | 5 cut(s) | 473, 1532, 2092, 2397, 2637 |
| BstV2I | GAAGAC | 3 cut(s) | 108, 343, 1577 |
| BstX2I | RGATCY | 7 cut(s) | 38, 481, 1200, 1258, 1729, 1831, 2506 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1713 |
| BstYI | RGATCY | 7 cut(s) | 38, 481, 1200, 1258, 1729, 1831, 2506 |
| BstZ17I | GTATAC | 1 cut(s) | 1123 |
| Bsu15I | ATCGAT | 1 cut(s) | 1936 |
| BsuI | GTATCC | 1 cut(s) | 2615 |
| BsuRI | GGCC | 8 cut(s) | 26, 140, 224, 710, 1465, 2639, 3492, 3715 |
| BsuTUI | ATCGAT | 1 cut(s) | 1936 |
| BtgI | CCRYGG | 1 cut(s) | 686 |
| BtgZI | GCGATG | 1 cut(s) | 603 |
| BtrI | CACGTC | 2 cut(s) | 79, 3127 |
| BtsCI | GGATG | 7 cut(s) | 458, 534, 1394, 1693, 2124, 2193, 2458 |
| BtsI | GCAGTG | 1 cut(s) | 2020 |
| BtsIMutI | CAGTG | 3 cut(s) | 120, 558, 2020 |
| BtuMI | TCGCGA | 1 cut(s) | 238 |
| BveI | ACCTGC | 1 cut(s) | 2804 |
| Cac8I | GCNNGC | 9 cut(s) | 459, 1171, 1281, 1975, 2064, 2139, 2373, 2415, 3617 |
| CaiI | CAGNNNCTG | 2 cut(s) | 3273, 3307 |
| CciI | TCATGA | 3 cut(s) | 303, 2080, 2098 |
| CfoI | GCGC | 4 cut(s) | 2154, 2592, 3479, 3538 |
| Cfr10I | RCCGGY | 1 cut(s) | 3149 |
| Cfr13I | GGNCC | 5 cut(s) | 139, 324, 727, 2398, 3714 |
| ClaI | ATCGAT | 1 cut(s) | 1936 |
| CseI | GACGC | 3 cut(s) | 653, 1352, 3150 |
| Csp6I | GTAC | 4 cut(s) | 803, 2254, 2305, 2355 |
| CspAI | ACCGGT | 1 cut(s) | 3149 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3031, 3066 |
| CviQI | GTAC | 4 cut(s) | 803, 2254, 2305, 2355 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 299 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 299 |
| EaeI | YGGCCR | 1 cut(s) | 3490 |
| Eam1104I | CTCTTC | 7 cut(s) | 204, 280, 991, 999, 3342, 3510, 3643 |
| EarI | CTCTTC | 7 cut(s) | 204, 280, 991, 999, 3342, 3510, 3643 |
| Eco105I | TACGTA | 1 cut(s) | 2304 |
| Eco130I | CCWWGG | 2 cut(s) | 686, 1606 |
| Eco147I | AGGCCT | 2 cut(s) | 26, 2639 |
| Eco24I | GRGCYC | 1 cut(s) | 813 |
| Eco31I | GGTCTC | 3 cut(s) | 1619, 3323, 3458 |
| Eco32I | GATATC | 2 cut(s) | 3020, 3658 |
| Eco47I | GGWCC | 3 cut(s) | 324, 727, 2398 |
| Eco57I | CTGAAG | 3 cut(s) | 771, 1848, 3323 |
| Eco88I | CYCGRG | 1 cut(s) | 3440 |
| Eco91I | GGTNACC | 1 cut(s) | 2337 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 734 |
| EcoO109I | RGGNCCY | 3 cut(s) | 324, 727, 2398 |
| EcoO65I | GGTNACC | 1 cut(s) | 2337 |
| EcoRI | GAATTC | 2 cut(s) | 2966, 3212 |
| EcoRII | CCWGG | 5 cut(s) | 168, 857, 915, 2608, 2769 |
| EcoRV | GATATC | 2 cut(s) | 3020, 3658 |
| EcoT14I | CCWWGG | 2 cut(s) | 686, 1606 |
| EcoT22I | ATGCAT | 1 cut(s) | 1953 |
| EcoT38I | GRGCYC | 1 cut(s) | 813 |
| ErhI | CCWWGG | 2 cut(s) | 686, 1606 |
| Esp3I | CGTCTC | 1 cut(s) | 3692 |
| FaqI | GGGAC | 8 cut(s) | 355, 1207, 1350, 1588, 2411, 2666, 2913, 3123 |
| FauI | CCCGC | 1 cut(s) | 450 |
| FauNDI | CATATG | 1 cut(s) | 1384 |
| FbaI | TGATCA | 2 cut(s) | 124, 2433 |
| FblI | GTMKAC | 2 cut(s) | 1122, 1558 |
| Fnu4HI | GCNGC | 5 cut(s) | 462, 1521, 2106, 2411, 2626 |
| FokI | GGATG | 7 cut(s) | 465, 521, 1401, 1700, 2131, 2200, 2465 |
| FriOI | GRGCYC | 1 cut(s) | 813 |
| Fsp4HI | GCNGC | 5 cut(s) | 462, 1521, 2106, 2411, 2626 |
| FspBI | CTAG | 8 cut(s) | 311, 485, 569, 884, 1256, 1727, 2534, 3653 |
| FspI | TGCGCA | 1 cut(s) | 2153 |
| GlaI | GCGC | 4 cut(s) | 2153, 2591, 3478, 3537 |
| GluI | GCNGC | 5 cut(s) | 462, 1521, 2106, 2411, 2626 |
| GsaI | CCCAGC | 2 cut(s) | 2398, 3426 |
| GsuI | CTGGAG | 3 cut(s) | 841, 2007, 2495 |
| HaeIII | GGCC | 8 cut(s) | 26, 140, 224, 710, 1465, 2639, 3492, 3715 |
| HapII | CCGG | 4 cut(s) | 1685, 2550, 3150, 3541 |
| HgaI | GACGC | 3 cut(s) | 653, 1352, 3150 |
| HhaI | GCGC | 4 cut(s) | 2154, 2592, 3479, 3538 |
| Hin1I | GRCGYC | 1 cut(s) | 645 |
| Hin6I | GCGC | 4 cut(s) | 2152, 2590, 3477, 3536 |
| HinP1I | GCGC | 4 cut(s) | 2152, 2590, 3477, 3536 |
| HincII | GTYRAC | 3 cut(s) | 148, 628, 966 |
| HindII | GTYRAC | 3 cut(s) | 148, 628, 966 |
| HindIII | AAGCTT | 3 cut(s) | 698, 1975, 2576 |
| HpaI | GTTAAC | 1 cut(s) | 628 |
| HpaII | CCGG | 4 cut(s) | 1685, 2550, 3150, 3541 |
| Hpy99I | CGWCG | 3 cut(s) | 296, 362, 3380 |
| HpyAV | CCTTC | 9 cut(s) | 37, 214, 337, 1519, 1816, 2688, 2705, 2783, 2919 |
| HpyCH4IV | ACGT | 8 cut(s) | 78, 360, 1237, 1429, 1621, 2176, 2303, 3126 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 398, 485, 697, 1462, 1529, 3412, 3616 |
| HpySE526I | ACGT | 8 cut(s) | 78, 360, 1237, 1429, 1621, 2176, 2303, 3126 |
| Hsp92I | GRCGYC | 1 cut(s) | 645 |
| HspAI | GCGC | 4 cut(s) | 2152, 2590, 3477, 3536 |
| Ksp22I | TGATCA | 2 cut(s) | 124, 2433 |
| KspAI | GTTAAC | 1 cut(s) | 628 |
| LguI | GCTCTTC | 1 cut(s) | 204 |
| LmnI | GCTCC | 4 cut(s) | 696, 1379, 3403, 3543 |
| Lsp1109I | GCAGC | 5 cut(s) | 473, 1532, 2092, 2397, 2637 |
| LweI | GCATC | 6 cut(s) | 901, 1379, 1465, 1549, 2469, 2505 |
| MaeI | CTAG | 8 cut(s) | 311, 485, 569, 884, 1256, 1727, 2534, 3653 |
| MaeII | ACGT | 8 cut(s) | 78, 360, 1237, 1429, 1621, 2176, 2303, 3126 |
| MaeIII | GTNAC | 7 cut(s) | 547, 928, 1402, 1694, 2337, 3162, 3357 |
| MfeI | CAATTG | 1 cut(s) | 2784 |
| MflI | RGATCY | 7 cut(s) | 38, 481, 1200, 1258, 1729, 1831, 2506 |
| MhlI | GDGCHC | 5 cut(s) | 582, 813, 1534, 2241, 2622 |
| MlsI | TGGCCA | 1 cut(s) | 3492 |
| MluNI | TGGCCA | 1 cut(s) | 3492 |
| MlyI | GAGTC | 4 cut(s) | 533, 833, 1229, 2035 |
| MmeI | TCCRAC | 4 cut(s) | 1852, 2159, 3055, 3251 |
| Mox20I | TGGCCA | 1 cut(s) | 3492 |
| Mph1103I | ATGCAT | 1 cut(s) | 1953 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1149, 2698, 3222 |
| MscI | TGGCCA | 1 cut(s) | 3492 |
| MslI | CAYNNNNRTG | 6 cut(s) | 780, 1215, 1387, 1711, 2117, 2451 |
| Msp20I | TGGCCA | 1 cut(s) | 3492 |
| MspA1I | CMGCKG | 2 cut(s) | 1523, 2628 |
| MspCI | CTTAAG | 1 cut(s) | 2666 |
| MspI | CCGG | 4 cut(s) | 1685, 2550, 3150, 3541 |
| MspR9I | CCNGG | 6 cut(s) | 170, 859, 917, 2551, 2610, 2771 |
| MunI | CAATTG | 1 cut(s) | 2784 |
| Mva1269I | GAATGC | 1 cut(s) | 3292 |
| MvaI | CCWGG | 5 cut(s) | 170, 859, 917, 2610, 2771 |
| MvnI | CGCG | 2 cut(s) | 238, 2592 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 398, 485, 697, 1462, 1529, 3412, 3616 |
| NciI | CCSGG | 1 cut(s) | 2551 |
| NcoI | CCATGG | 1 cut(s) | 686 |
| NdeI | CATATG | 1 cut(s) | 1384 |
| NlaIV | GGNNCC | 5 cut(s) | 287, 692, 2399, 2962, 3689 |
| NmeAIII | GCCGAG | 1 cut(s) | 673 |
| NmuCI | GTSAC | 4 cut(s) | 1402, 1694, 3162, 3357 |
| NruI | TCGCGA | 1 cut(s) | 238 |
| NsbI | TGCGCA | 1 cut(s) | 2153 |
| NsiI | ATGCAT | 1 cut(s) | 1953 |
| NspI | RCATGY | 4 cut(s) | 1508, 1672, 2070, 3438 |
| NspV | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| PaeR7I | CTCGAG | 1 cut(s) | 3440 |
| PagI | TCATGA | 3 cut(s) | 303, 2080, 2098 |
| PasI | CCCWGGG | 1 cut(s) | 2609 |
| PceI | AGGCCT | 2 cut(s) | 26, 2639 |
| PciI | ACATGT | 2 cut(s) | 1668, 3434 |
| PciSI | GCTCTTC | 1 cut(s) | 204 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 235 |
| PctI | GAATGC | 1 cut(s) | 3292 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1149, 2698, 3222 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 3233, 3626 |
| PfoI | TCCNGGA | 1 cut(s) | 168 |
| PinAI | ACCGGT | 1 cut(s) | 3149 |
| PkrI | GCNGC | 5 cut(s) | 463, 1522, 2107, 2412, 2627 |
| PleI | GAGTC | 4 cut(s) | 532, 833, 1228, 2035 |
| PpsI | GAGTC | 4 cut(s) | 532, 833, 1228, 2035 |
| Ppu21I | YACGTR | 2 cut(s) | 1430, 2304 |
| PpuMI | RGGWCCY | 3 cut(s) | 324, 727, 2398 |
| PscI | ACATGT | 2 cut(s) | 1668, 3434 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3470 |
| PsiI | TTATAA | 1 cut(s) | 1341 |
| Psp1406I | AACGTT | 1 cut(s) | 1237 |
| Psp5II | RGGWCCY | 3 cut(s) | 324, 727, 2398 |
| Psp6I | CCWGG | 5 cut(s) | 168, 857, 915, 2608, 2769 |
| PspEI | GGTNACC | 1 cut(s) | 2337 |
| PspFI | CCCAGC | 2 cut(s) | 2394, 3422 |
| PspGI | CCWGG | 5 cut(s) | 168, 857, 915, 2608, 2769 |
| PspN4I | GGNNCC | 5 cut(s) | 287, 692, 2399, 2962, 3689 |
| PspPI | GGNCC | 5 cut(s) | 139, 324, 727, 2398, 3714 |
| PspPPI | RGGWCCY | 3 cut(s) | 324, 727, 2398 |
| PstNI | CAGNNNCTG | 2 cut(s) | 3273, 3307 |
| PsuI | RGATCY | 7 cut(s) | 38, 481, 1200, 1258, 1729, 1831, 2506 |
| PvuII | CAGCTG | 1 cut(s) | 1523 |
| RruI | TCGCGA | 1 cut(s) | 238 |
| RsaI | GTAC | 4 cut(s) | 804, 2255, 2306, 2356 |
| RsaNI | GTAC | 4 cut(s) | 803, 2254, 2305, 2355 |
| RseI | CAYNNNNRTG | 6 cut(s) | 780, 1215, 1387, 1711, 2117, 2451 |
| SapI | GCTCTTC | 1 cut(s) | 204 |
| SatI | GCNGC | 5 cut(s) | 462, 1521, 2106, 2411, 2626 |
| Sau96I | GGNCC | 5 cut(s) | 139, 324, 727, 2398, 3714 |
| SchI | GAGTC | 4 cut(s) | 533, 833, 1229, 2035 |
| ScrFI | CCNGG | 6 cut(s) | 170, 859, 917, 2551, 2610, 2771 |
| SduI | GDGCHC | 5 cut(s) | 582, 813, 1534, 2241, 2622 |
| SfaNI | GCATC | 6 cut(s) | 901, 1379, 1465, 1549, 2469, 2505 |
| SfcI | CTRYAG | 1 cut(s) | 2724 |
| Sfr274I | CTCGAG | 1 cut(s) | 3440 |
| SfuI | TTCGAA | 5 cut(s) | 160, 260, 1570, 2193, 3216 |
| SinI | GGWCC | 3 cut(s) | 324, 727, 2398 |
| SlaI | CTCGAG | 1 cut(s) | 3440 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 780, 1215, 1387, 1711, 2117, 2451 |
| SnaBI | TACGTA | 1 cut(s) | 2304 |
| SseBI | AGGCCT | 2 cut(s) | 26, 2639 |
| SsiI | CCGC | 5 cut(s) | 457, 933, 2592, 2628, 3398 |
| SspI | AATATT | 1 cut(s) | 2828 |
| SspMI | CTAG | 8 cut(s) | 311, 485, 569, 884, 1256, 1727, 2534, 3653 |
| StuI | AGGCCT | 2 cut(s) | 26, 2639 |
| StyD4I | CCNGG | 6 cut(s) | 168, 857, 915, 2549, 2608, 2769 |
| StyI | CCWWGG | 2 cut(s) | 686, 1606 |
| TaiI | ACGT | 8 cut(s) | 81, 363, 1240, 1432, 1624, 2179, 2306, 3129 |
| TatI | WGTACW | 1 cut(s) | 2354 |
| TscAI | CASTG | 3 cut(s) | 127, 558, 2020 |
| TseFI | GTSAC | 4 cut(s) | 1402, 1694, 3162, 3357 |
| TseI | GCWGC | 5 cut(s) | 461, 1520, 2105, 2410, 2625 |
| Tsp45I | GTSAC | 4 cut(s) | 1402, 1694, 3162, 3357 |
| TspGWI | ACGGA | 2 cut(s) | 357, 3757 |
| TspRI | CASTG | 3 cut(s) | 127, 558, 2020 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 3233, 3626 |
| Vha464I | CTTAAG | 1 cut(s) | 2666 |
| VneI | GTGCAC | 2 cut(s) | 1530, 2618 |
| VpaK11BI | GGWCC | 3 cut(s) | 324, 727, 2398 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 734 |
| XapI | RAATTY | 9 cut(s) | 496, 665, 1184, 1352, 1790, 1991, 2557, 2966, 3212 |
| XbaI | TCTAGA | 2 cut(s) | 1726, 3652 |
| XceI | RCATGY | 4 cut(s) | 1508, 1672, 2070, 3438 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2181 |
| XhoI | CTCGAG | 1 cut(s) | 3440 |
| XmiI | GTMKAC | 2 cut(s) | 1122, 1558 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1149, 2698, 3222 |
| XspI | CTAG | 8 cut(s) | 311, 485, 569, 884, 1256, 1727, 2534, 3653 |
| Zsp2I | ATGCAT | 1 cut(s) | 1953 |