Rorug05G0216300

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
22264923 .. 22267354
2432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0216300.1

Sequence Viewer

Length: 1749 bp
ATGGCTACTCTATTGCCTCTCCTCTTCTTCCTCCTCCAACCCCTCTTCTCCATTGCCAATGTCCACAAACTCAACCAACTCAGATCAGAGCTCATCTCCCAATCCCCTTCTCTCAATGACACCCCACCCACCCTTGACTTTGAAGTAACCAAACCCATTCCAGTACCCAAAACCAAGCCTTGTTCTGAGCTCATTCTCCAACATGATTTTGCCTACACTTATGGAAAACCACCAGTCTTTGCTAACTACATTCCTCCCTCAAATTGCCCGTCTCAGAAGTTCTCCAAGATTGTTCTTGAATGGAAAGCTACAAGCAAAGGAAGACAATTTGACCGCATTTTTGGGGTTTGGCTTTCTGGTGTTGAGCTTCTCAGGAGCTGCACAGCTGAGCCAAGGACCAATGGGATTGTCTGGAGTGTTGAGAAGGACATCAGCAGGTACTATTCGTTGCTCCAAAAGAAACAGACAGTTGCTGTTTATCTTGGCAGTTTGATTGATTCAACATACACTGGAGTTTACCATGTGAATATAAGTTTTCATTTTTATCCTGCTGAGGAGAGTTTGCATATTTATGATCAAAACGTGGGTGATTTGGCATCTGGATATCATTCTTGGGCGGATTTGATTCTGCCCATTTCGAGAAATCTGCCTTTGACTGATGGGTTGTGGTTTGAAGTTGAGAATTCAACTGATAATGAGTTGAAGGAATTCGAGATTCCTCGAAATGCTTATAGGGCTGTGTTGGAGGTTTATGTTTCATTTCATGAGAATGATGAGTTTTGGTATTCCAATCCTACTAATGAGTACATTGCTGCCAACAACCTTAGTGGCACGCCCGGAAATGGGCCTTTCAGGGAGGTTGTGGTGAGTTTAGATGGTGTGGTTGTTGGTGCTGTTTGGCCTTTTACTGTGATTTACACTGGAGGGATCAATCCTCTTCTGTGGAGTCCCATTACCGGCATTGGTTCATTCGATCTACCTTCTTATGATATCGAAATCACACCGTTTTTAGGTAATATATTGGATGGAAAAAGCCACAAGATTGGGTTTAATGTTACCAATGCCTTGAATGTATGGTACATTGATGCAAATTTGCATATTTGGTTGGACAAACAGGGCACAAGAACTCAAGCACAGCTTGTGAAGCATACTAGCTTGCCCCTTATTATTTCAGTGGTGTCGGATTTTGTGGGTTTAAATGGCACATTTGTGACAAGGGTCAGCAGGTCCGTCTCATCAACTGGGTGGGTGAAGTCCTCTAATGGGAATATCACAACCCAGTCAATTCAAGATTTTTCCTACATTAATAAAATGGTCATGGGGAATGATGGAAATATGCAGACAGTGGACCAGAACATAAATTTCAATGATACCGTTCTTATCAAGACGCCATCCTCCTATGTTCATTCACTGATATCAAACAAAACATTTCTCCTTTCCTTGTACACTGACTTGTTGGAACAAGAAAATGAAACTTCTTTGTATGTGATGAACGTCGATTTGGGATTTATCGAGAAGAAAACTGCAATTGGTGGTTCAAGAGTCTTGGAGAGCTCTCTCAGAAATTTGCAGAATGCAGAGGGTAATAGGGTTGTAAGAAACAATTTGGTAGTTAGCAGAGTGGGGAATACACAGCAAGTATACAGATATCATGGTGGCAGATTCTGTTACTTTAGAAATGTAAGCAGCTCAAACTCCACCATACTTTATGATGAAGTGGAGGATACATGCCACAAAAAAGCCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

582

Amino Acids

65.4

Weight (kDa)

5.93

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PNGaseA PF12222 57 - 383 1e-103 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNGase_A_C PF25156 402 - 478 8.5e-20 PNGase_A C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 426, 1215
AccI GTMKAC 1 cut(s) 1641
AciI CCGC 2 cut(s) 334, 617
AclWI GGATC 1 cut(s) 935
AcsI RAATTY 5 cut(s) 682, 707, 1090, 1360, 1564
AcyI GRCGYC 1 cut(s) 1388
AfaI GTAC 5 cut(s) 165, 440, 806, 1079, 1445
AfiI CCNNNNNNNGG 5 cut(s) 842, 843, 956, 1010, 1263
AjuI GAANNNNNNNTTGG 2 cut(s) 1484, 1516
AleI CACNNNNGTG 1 cut(s) 1208
Alw21I GWGCWC 3 cut(s) 93, 192, 1556
Alw26I GTCTC 2 cut(s) 276, 1237
AlwI GGATC 1 cut(s) 935
AlwNI CAGNNNCTG 3 cut(s) 378, 473, 1665
AoxI GGCC 2 cut(s) 845, 899
ApeKI GCWGC 3 cut(s) 378, 812, 1686
ApoI RAATTY 5 cut(s) 682, 707, 1090, 1360, 1564
ArsI GACNNNNNNTTYG 4 cut(s) 254, 286, 323, 355
AseI ATTAAT 1 cut(s) 1305
Asp700I GAANNNNTTC 1 cut(s) 707
AspS9I GGNCC 4 cut(s) 396, 845, 1227, 1348
AsuC2I CCSGG 1 cut(s) 837
AsuHPI GGTGA 3 cut(s) 599, 877, 1261
AvaII GGWCC 3 cut(s) 396, 1227, 1348
BaeGI GKGCMC 1 cut(s) 1121
BanII GRGCYC 3 cut(s) 93, 192, 1556
BbsI GAAGAC 1 cut(s) 328
Bbv12I GWGCWC 3 cut(s) 93, 192, 1556
BbvCI CCTCAGC 1 cut(s) 552
BbvI GCAGC 3 cut(s) 365, 799, 1698
BccI CCATC 5 cut(s) 653, 869, 1019, 1322, 1399
BcgI CGANNNNNNTGC 2 cut(s) 628, 662
BciVI GTATCC 1 cut(s) 1717
BclI TGATCA 1 cut(s) 574
BcnI CCSGG 1 cut(s) 837
BcoDI GTCTC 2 cut(s) 276, 1237
BfaI CTAG 1 cut(s) 1152
BfuAI ACCTGC 2 cut(s) 426, 1215
BfuI GTATCC 1 cut(s) 1717
BisI GCNGC 3 cut(s) 379, 813, 1687
BlpI GCTNAGC 1 cut(s) 387
BlsI GCNGC 3 cut(s) 380, 814, 1688
Bme1390I CCNGG 1 cut(s) 837
Bme18I GGWCC 3 cut(s) 396, 1227, 1348
BmgT120I GGNCC 4 cut(s) 396, 845, 1227, 1348
BmrFI CCNGG 1 cut(s) 837
BmrI ACTGGG 2 cut(s) 1251, 1273
BmsI GCATC 2 cut(s) 605, 1075
BmuI ACTGGG 2 cut(s) 1251, 1273
BoxI GACNNNNGTC 1 cut(s) 1217
BpiI GAAGAC 1 cut(s) 328
BplI GAGNNNNNCTC 2 cut(s) 80, 112
BpmI CTGGAG 3 cut(s) 433, 531, 942
Bpu10I CCTNAGC 1 cut(s) 552
Bpu1102I GCTNAGC 1 cut(s) 387
BpuEI CTTGAG 1 cut(s) 1113
BpuMI CCSGG 1 cut(s) 837
BsaHI GRCGYC 1 cut(s) 1388
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 5 cut(s) 842, 843, 956, 1010, 1263
Bse118I RCCGGY 1 cut(s) 956
Bse1I ACTGG 6 cut(s) 161, 233, 514, 925, 1246, 1279
Bse3DI GCAATG 2 cut(s) 51, 807
BseDI CCNNGG 1 cut(s) 392
BseGI GGATG 2 cut(s) 1030, 1391
BseLI CCNNNNNNNGG 5 cut(s) 842, 843, 956, 1010, 1263
BseMI GCAATG 2 cut(s) 51, 807
BseMII CTCAG 7 cut(s) 94, 177, 287, 378, 385, 543, 1573
BseNI ACTGG 6 cut(s) 161, 233, 514, 925, 1246, 1279
BseRI GAGGAG 3 cut(s) 11, 23, 569
BseSI GKGCMC 1 cut(s) 1121
BseXI GCAGC 3 cut(s) 365, 799, 1698
BsgI GTGCAG 1 cut(s) 364
BshFI GGCC 2 cut(s) 847, 901
BsiHKAI GWGCWC 3 cut(s) 93, 192, 1556
BsiSI CCGG 2 cut(s) 837, 957
BslFI GGGAC 1 cut(s) 933
BslI CCNNNNNNNGG 5 cut(s) 842, 843, 956, 1010, 1263
BsmAI GTCTC 2 cut(s) 276, 1237
BsmBI CGTCTC 2 cut(s) 276, 1237
BsmFI GGGAC 1 cut(s) 933
BsmI GAATGC 1 cut(s) 1579
BsnI GGCC 2 cut(s) 847, 901
Bsp1286I GDGCHC 4 cut(s) 93, 192, 1121, 1556
Bsp1407I TGTACA 1 cut(s) 1443
Bsp143I GATC 4 cut(s) 83, 574, 927, 973
Bsp1720I GCTNAGC 1 cut(s) 387
BspACI CCGC 2 cut(s) 334, 617
BspANI GGCC 2 cut(s) 847, 901
BspCNI CTCAG 7 cut(s) 93, 178, 286, 379, 384, 544, 1572
BspHI TCATGA 1 cut(s) 763
BspMI ACCTGC 2 cut(s) 426, 1215
BspPI GGATC 1 cut(s) 935
BsrDI GCAATG 2 cut(s) 51, 807
BsrFI RCCGGY 1 cut(s) 956
BsrGI TGTACA 1 cut(s) 1443
BsrI ACTGG 6 cut(s) 161, 233, 514, 925, 1246, 1279
BssAI RCCGGY 1 cut(s) 956
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 4 cut(s) 83, 574, 927, 973
BssNAI GTATAC 1 cut(s) 1642
BssNI GRCGYC 1 cut(s) 1388
BssT1I CCWWGG 1 cut(s) 392
Bst1107I GTATAC 1 cut(s) 1642
Bst4CI ACNGT 5 cut(s) 469, 910, 1005, 1345, 1375
Bst6I CTCTTC 3 cut(s) 29, 50, 942
BstACI GRCGYC 1 cut(s) 1388
BstAUI TGTACA 1 cut(s) 1443
BstC8I GCNNGC 2 cut(s) 833, 1157
BstDEI CTNAG 8 cut(s) 80, 186, 273, 371, 387, 552, 824, 1559
BstF5I GGATG 2 cut(s) 1030, 1391
BstKTI GATC 4 cut(s) 86, 577, 930, 976
BstMAI GTCTC 2 cut(s) 276, 1237
BstMBI GATC 4 cut(s) 83, 574, 927, 973
BstMWI GCNNNNNNNGC 2 cut(s) 734, 1144
BstNSI RCATGY 1 cut(s) 1731
BstPAI GACNNNNGTC 1 cut(s) 1217
BstSCI CCNGG 1 cut(s) 835
BstSLI GKGCMC 1 cut(s) 1121
BstV1I GCAGC 3 cut(s) 365, 799, 1698
BstV2I GAAGAC 1 cut(s) 328
BstXI CCANNNNNNTGG 1 cut(s) 1043
BstZ17I GTATAC 1 cut(s) 1642
BsuI GTATCC 1 cut(s) 1717
BsuRI GGCC 2 cut(s) 847, 901
BtsCI GGATG 2 cut(s) 1030, 1391
BtsIMutI CAGTG 6 cut(s) 507, 918, 1179, 1350, 1409, 1446
BveI ACCTGC 2 cut(s) 426, 1215
Cac8I GCNNGC 2 cut(s) 833, 1157
CaiI CAGNNNCTG 3 cut(s) 378, 473, 1665
CciI TCATGA 1 cut(s) 763
Cfr10I RCCGGY 1 cut(s) 956
Cfr13I GGNCC 4 cut(s) 396, 845, 1227, 1348
CseI GACGC 1 cut(s) 1396
Csp6I GTAC 5 cut(s) 164, 439, 805, 1078, 1444
CspCI CAANNNNNGTGG 2 cut(s) 808, 843
CviAII CATG 6 cut(s) 203, 521, 764, 1318, 1652, 1728
CviQI GTAC 5 cut(s) 164, 439, 805, 1078, 1444
DdeI CTNAG 8 cut(s) 80, 186, 273, 371, 387, 552, 824, 1559
DpnI GATC 4 cut(s) 85, 576, 929, 975
DpnII GATC 4 cut(s) 83, 574, 927, 973
DraI TTTAAA 1 cut(s) 1197
Eam1104I CTCTTC 3 cut(s) 29, 50, 942
EarI CTCTTC 3 cut(s) 29, 50, 942
EciI GGCGGA 1 cut(s) 632
Ecl136II GAGCTC 3 cut(s) 91, 190, 1554
Eco130I CCWWGG 1 cut(s) 392
Eco24I GRGCYC 3 cut(s) 93, 192, 1556
Eco32I GATATC 4 cut(s) 605, 991, 1416, 1649
Eco47I GGWCC 3 cut(s) 396, 1227, 1348
Eco53kI GAGCTC 3 cut(s) 91, 190, 1554
EcoICRI GAGCTC 3 cut(s) 91, 190, 1554
EcoRI GAATTC 2 cut(s) 682, 707
EcoRV GATATC 4 cut(s) 605, 991, 1416, 1649
EcoT14I CCWWGG 1 cut(s) 392
EcoT38I GRGCYC 3 cut(s) 93, 192, 1556
ErhI CCWWGG 1 cut(s) 392
Esp3I CGTCTC 2 cut(s) 276, 1237
FaeI CATG 6 cut(s) 206, 524, 767, 1321, 1655, 1731
FalI AAGNNNNNCTT 2 cut(s) 1122, 1154
FaqI GGGAC 1 cut(s) 933
FatI CATG 6 cut(s) 202, 520, 763, 1317, 1651, 1727
FbaI TGATCA 1 cut(s) 574
FblI GTMKAC 1 cut(s) 1641
Fnu4HI GCNGC 3 cut(s) 379, 813, 1687
FokI GGATG 2 cut(s) 1037, 1378
FriOI GRGCYC 3 cut(s) 93, 192, 1556
Fsp4HI GCNGC 3 cut(s) 379, 813, 1687
FspBI CTAG 1 cut(s) 1152
GluI GCNGC 3 cut(s) 379, 813, 1687
GsuI CTGGAG 3 cut(s) 433, 531, 942
HaeIII GGCC 2 cut(s) 847, 901
HapII CCGG 2 cut(s) 837, 957
HgaI GACGC 1 cut(s) 1396
Hin1I GRCGYC 1 cut(s) 1388
Hin1II CATG 6 cut(s) 206, 524, 767, 1321, 1655, 1731
HinfI GANTC 6 cut(s) 497, 625, 715, 946, 1542, 1662
HpaII CCGG 2 cut(s) 837, 957
HphI GGTGA 3 cut(s) 599, 877, 1261
Hpy166II GTNNAC 5 cut(s) 64, 517, 1348, 1446, 1642
Hpy188I TCNGA 6 cut(s) 83, 88, 187, 276, 1183, 1562
Hpy8I GTNNAC 5 cut(s) 64, 517, 1348, 1446, 1642
Hpy99I CGWCG 1 cut(s) 1499
HpyAV CCTTC 4 cut(s) 117, 418, 697, 990
HpyCH4III ACNGT 5 cut(s) 469, 910, 1005, 1345, 1375
HpyCH4IV ACGT 2 cut(s) 582, 1494
HpyCH4V TGCA 8 cut(s) 381, 565, 1088, 1096, 1339, 1526, 1570, 1577
HpyF10VI GCNNNNNNNGC 2 cut(s) 734, 1144
HpyF3I CTNAG 8 cut(s) 80, 186, 273, 371, 387, 552, 824, 1559
HpySE526I ACGT 2 cut(s) 582, 1494
Hsp92I GRCGYC 1 cut(s) 1388
Hsp92II CATG 6 cut(s) 206, 524, 767, 1321, 1655, 1731
Ksp22I TGATCA 1 cut(s) 574
Kzo9I GATC 4 cut(s) 83, 574, 927, 973
LmnI GCTCC 2 cut(s) 375, 456
Lsp1109I GCAGC 3 cut(s) 365, 799, 1698
LweI GCATC 2 cut(s) 605, 1075
MaeI CTAG 1 cut(s) 1152
MaeII ACGT 2 cut(s) 582, 1494
MaeIII GTNAC 4 cut(s) 145, 1054, 1210, 1667
MalI GATC 4 cut(s) 85, 576, 929, 975
MboI GATC 4 cut(s) 83, 574, 927, 973
MboII GAAGA 6 cut(s) 16, 19, 37, 333, 929, 1528
MfeI CAATTG 1 cut(s) 1527
MhlI GDGCHC 4 cut(s) 93, 192, 1121, 1556
MlyI GAGTC 2 cut(s) 955, 1551
MmeI TCCRAC 6 cut(s) 61, 223, 723, 1086, 1161, 1437
MroXI GAANNNNTTC 1 cut(s) 707
MseI TTAA 3 cut(s) 1050, 1196, 1305
MslI CAYNNNNRTG 3 cut(s) 570, 768, 1208
MspA1I CMGCKG 1 cut(s) 386
MspI CCGG 2 cut(s) 837, 957
MspR9I CCNGG 1 cut(s) 837
MunI CAATTG 1 cut(s) 1527
Mva1269I GAATGC 1 cut(s) 1579
MwoI GCNNNNNNNGC 2 cut(s) 734, 1144
NciI CCSGG 1 cut(s) 837
NdeII GATC 4 cut(s) 83, 574, 927, 973
NlaIII CATG 6 cut(s) 206, 524, 767, 1321, 1655, 1731
NmuCI GTSAC 1 cut(s) 1210
NspI RCATGY 1 cut(s) 1731
OliI CACNNNNGTG 1 cut(s) 1208
PagI TCATGA 1 cut(s) 763
PctI GAATGC 1 cut(s) 1579
PdmI GAANNNNTTC 1 cut(s) 707
PfeI GAWTC 4 cut(s) 497, 625, 715, 1662
PkrI GCNGC 3 cut(s) 380, 814, 1688
PleI GAGTC 2 cut(s) 954, 1550
PpsI GAGTC 2 cut(s) 954, 1550
PshAI GACNNNNGTC 1 cut(s) 1217
PshBI ATTAAT 1 cut(s) 1305
Psp124BI GAGCTC 3 cut(s) 93, 192, 1556
PspPI GGNCC 4 cut(s) 396, 845, 1227, 1348
PstNI CAGNNNCTG 3 cut(s) 378, 473, 1665
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 5 cut(s) 165, 440, 806, 1079, 1445
RsaNI GTAC 5 cut(s) 164, 439, 805, 1078, 1444
RseI CAYNNNNRTG 3 cut(s) 570, 768, 1208
SacI GAGCTC 3 cut(s) 93, 192, 1556
SaqAI TTAA 3 cut(s) 1050, 1196, 1305
SatI GCNGC 3 cut(s) 379, 813, 1687
Sau3AI GATC 4 cut(s) 83, 574, 927, 973
Sau96I GGNCC 4 cut(s) 396, 845, 1227, 1348
SchI GAGTC 2 cut(s) 955, 1551
ScrFI CCNGG 1 cut(s) 837
SduI GDGCHC 4 cut(s) 93, 192, 1121, 1556
SfaNI GCATC 2 cut(s) 605, 1075
SinI GGWCC 3 cut(s) 396, 1227, 1348
SmiMI CAYNNNNRTG 3 cut(s) 570, 768, 1208
SmlI CTYRAG 1 cut(s) 1128
SmoI CTYRAG 1 cut(s) 1128
SsiI CCGC 2 cut(s) 334, 617
SspMI CTAG 1 cut(s) 1152
SstI GAGCTC 3 cut(s) 93, 192, 1556
StyD4I CCNGG 1 cut(s) 835
StyI CCWWGG 1 cut(s) 392
TaaI ACNGT 5 cut(s) 469, 910, 1005, 1345, 1375
TaiI ACGT 2 cut(s) 585, 1497
TaqI TCGA 7 cut(s) 638, 711, 721, 972, 993, 1497, 1512
TatI WGTACW 2 cut(s) 804, 1443
TfiI GAWTC 4 cut(s) 497, 625, 715, 1662
Tru1I TTAA 3 cut(s) 1050, 1196, 1305
Tru9I TTAA 3 cut(s) 1050, 1196, 1305
TscAI CASTG 6 cut(s) 514, 925, 1179, 1350, 1416, 1453
TseFI GTSAC 1 cut(s) 1210
TseI GCWGC 3 cut(s) 378, 812, 1686
Tsp45I GTSAC 1 cut(s) 1210
TspDTI ATGAA 8 cut(s) 527, 747, 752, 957, 1394, 1485, 1505, 1728
TspGWI ACGGA 1 cut(s) 1219
TspRI CASTG 6 cut(s) 514, 925, 1179, 1350, 1416, 1453
VpaK11BI GGWCC 3 cut(s) 396, 1227, 1348
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 5 cut(s) 682, 707, 1090, 1360, 1564
XceI RCATGY 1 cut(s) 1731
XmiI GTMKAC 1 cut(s) 1641
XmnI GAANNNNTTC 1 cut(s) 707
XspI CTAG 1 cut(s) 1152
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.