Rmu_sc0016606.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016606.1
Physical Location & Seq
Forward (+)
3373 .. 5560
2188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016606.1_g000001.1.cds

Sequence Viewer

Length: 1833 bp
atggctctgttccgaggtcacaacgcctccctttccagatatactacttctccttctggacttgcttatgacgtgttcctgagcttcagaggtgaagacacccgaaagaacttcactgaccacctctacacggccctttcacgaagttctgtcattgtgttttcgaaagactacacctcttccaaatggtgcctggacgagcttgtcatgatccttgaacgcaagaggacctccaatcatgtcgtgttaccggtattctacgacgttaatccatctcaactgaggaaacatgcagaaactcttgcaaaggttcctaagtaccaagaaaatcaatcctcggagaagttgaatggatggcgggcagcacttagagaagttgcagatctagcaggaaatgttttagaaaatgaagctgacgggcacgagtcaaagttcatccaaaaaattgttagagagattcaagacaagctaggtcgtgtgcccctaagtgatgtccagaaggaattagaggataagttgttatctgttaaccctgttcttgatgatgccgaggggaagcaactgaaattccaaacgactgtgaagccatggctccataagcttaaagaggctgtctatgaggctgaggacctgttgcaggagatcaaaacagaagtgttgaggcaaaagaacaatgacgaatatgggagtagcagcagtaaggtacatgagctcatctctactccatctcatgcttttgactcagctttaatatactccagggtagaggaagttcttgaaaaactaaacaacatttcgaagcagacaaaagatgtcctggattcagcagtaaccgctggacacagagtatcacaaacactaccgtcaacttctttggtagaaaagtctgtgtatggaagaggtgaagagaaagaaagattcattaaattattgctatcagatgatgagactggcaatgaaataggtgtgattcctattgtgggtatgggtgggatcggaaagacaacccttgcccagtttctatacaacgatgttagagtcgagcaacattttcacctccaagcatgggtttgcgtttcaaaagaatttgatgtttttaggatcttgcaacacatttatgagtccctcacttcaaaatcttgccaaagcacaaacctagatctgcttctatcaaagttgcaggcaactttgagggggaaaaggttcttctttgttcttgatgacatctggaacaagaattataaccagttggaatgcttattgcgtccccttgggtctggagcacttggaagcaagatcattgttacaacacgtgatgaaaatgttgcacgtatgatgggtagccttgaagctcaccatctcatgccaatgtctgaggaagatagctggtcgttattcgaaaaacatgccttcaaaaatgcaggtgttggtacacactcgcatcttgaaaaaatcggtagacaaattgttcaaaagtgcaatggtcttcctttggctattaagtcccttgggggtctcttatgttctaaattgttagtggaggaatgggaaagtatattgaacagtgacatgtgggagttctcaccggatgagagtgacattctgccgtctctatggttgagctatctagatctgcctctacatctcaagcgttgttttgcctatagttcactgtatcccaagaactatgaatttcaaaaatcagagttggtttacttgtggaaggctgaagatctattgcagcataaaaaaaacaaaatggcagaagaacaagctttgtatctggagaattttgttttaggtgggagggcagtaattcacccaacagtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

610

Amino Acids

69.41

Weight (kDa)

6.16

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1242
AarI CACCTGC 1 cut(s) 1412
AasI GACNNNNNNGTC 1 cut(s) 203
Acc36I ACCTGC 1 cut(s) 1412
AccB1I GGYRCC 1 cut(s) 189
AccI GTMKAC 1 cut(s) 1459
AciI CCGC 2 cut(s) 358, 834
AclWI GGATC 3 cut(s) 205, 1001, 1109
AcsI RAATTY 4 cut(s) 566, 1085, 1691, 1789
AcuI CTGAAG 2 cut(s) 70, 1749
AcvI CACGTG 1 cut(s) 1313
AfaI GTAC 3 cut(s) 320, 705, 1432
AfiI CCNNNNNNNGG 4 cut(s) 130, 637, 980, 1066
AflIII ACRYGT 3 cut(s) 72, 1310, 1569
AgeI ACCGGT 1 cut(s) 250
AjiI CACGTC 1 cut(s) 73
AjnI CCWGG 3 cut(s) 192, 758, 816
Alw21I GWGCWC 2 cut(s) 714, 1285
Alw26I GTCTC 3 cut(s) 941, 1520, 1614
AlwI GGATC 3 cut(s) 205, 1001, 1109
AoxI GGCC 1 cut(s) 132
ApeKI GCWGC 3 cut(s) 362, 693, 1741
ApoI RAATTY 4 cut(s) 566, 1085, 1691, 1789
AsiGI ACCGGT 1 cut(s) 250
Asp700I GAANNNNTTC 1 cut(s) 1202
AspS9I GGNCC 3 cut(s) 133, 228, 628
AsuHPI GGTGA 6 cut(s) 104, 914, 1046, 1346, 1575, 1811
AsuII TTCGAA 3 cut(s) 164, 797, 1398
AvaII GGWCC 2 cut(s) 228, 628
BaeGI GKGCMC 2 cut(s) 423, 483
BanI GGYRCC 1 cut(s) 189
BanII GRGCYC 1 cut(s) 714
BauI CACGAG 1 cut(s) 422
BbrPI CACGTG 1 cut(s) 1313
BbsI GAAGAC 2 cut(s) 102, 1478
Bbv12I GWGCWC 2 cut(s) 714, 1285
BbvCI CCTCAGC 1 cut(s) 624
BbvI GCAGC 3 cut(s) 374, 705, 1753
BccI CCATC 5 cut(s) 280, 348, 733, 1330, 1365
BceAI ACGGC 2 cut(s) 147, 1591
BcgI CGANNNNNNTGC 2 cut(s) 1388, 1422
BciT130I CCWGG 3 cut(s) 194, 760, 818
BciVI GTATCC 1 cut(s) 1686
BcoDI GTCTC 3 cut(s) 941, 1520, 1614
BfaI CTAG 4 cut(s) 386, 470, 1157, 1628
BfmI CTRYAG 1 cut(s) 1663
BfuAI ACCTGC 1 cut(s) 1412
BfuI GTATCC 1 cut(s) 1686
BglII AGATCT 4 cut(s) 382, 1159, 1630, 1732
BisI GCNGC 3 cut(s) 363, 694, 1742
BlsI GCNGC 3 cut(s) 364, 695, 1743
Bme1390I CCNGG 3 cut(s) 194, 760, 818
Bme18I GGWCC 2 cut(s) 228, 628
BmgBI CACGTC 1 cut(s) 73
BmgT120I GGNCC 3 cut(s) 133, 228, 628
BmiI GGNNCC 3 cut(s) 191, 312, 593
BmrFI CCNGG 3 cut(s) 194, 760, 818
BmrI ACTGGG 1 cut(s) 1009
BmsI GCATC 2 cut(s) 535, 1450
BmuI ACTGGG 1 cut(s) 1009
BpiI GAAGAC 2 cut(s) 102, 1478
BplI GAGNNNNNCTC 2 cut(s) 701, 733
BpmI CTGGAG 3 cut(s) 742, 1299, 1805
Bpu10I CCTNAGC 2 cut(s) 80, 624
Bpu14I TTCGAA 3 cut(s) 164, 797, 1398
BpuEI CTTGAG 1 cut(s) 1631
BsaAI YACGTR 2 cut(s) 1313, 1331
BsaI GGTCTC 1 cut(s) 1520
BsaJI CCNNGG 7 cut(s) 13, 336, 549, 587, 759, 1270, 1507
BsaWI WCCGGW 2 cut(s) 250, 1585
BsaXI ACNNNNNCTCC 4 cut(s) 11, 34, 41, 64
Bsc4I CCNNNNNNNGG 4 cut(s) 130, 637, 980, 1066
Bse118I RCCGGY 1 cut(s) 250
Bse1I ACTGG 3 cut(s) 955, 1015, 1246
Bse3DI GCAATG 2 cut(s) 961, 1486
BseBI CCWGG 3 cut(s) 194, 760, 818
BseDI CCNNGG 7 cut(s) 13, 336, 549, 587, 759, 1270, 1507
BseGI GGATG 3 cut(s) 359, 435, 1594
BseLI CCNNNNNNNGG 4 cut(s) 130, 637, 980, 1066
BseMI GCAATG 2 cut(s) 961, 1486
BseMII CTCAG 5 cut(s) 71, 272, 615, 756, 1365
BseNI ACTGG 3 cut(s) 955, 1015, 1246
BseSI GKGCMC 2 cut(s) 423, 483
BseXI GCAGC 3 cut(s) 374, 705, 1753
BshFI GGCC 1 cut(s) 134
BshNI GGYRCC 1 cut(s) 189
BshTI ACCGGT 1 cut(s) 250
BsiHKAI GWGCWC 2 cut(s) 714, 1285
BsiSI CCGG 2 cut(s) 251, 1586
BslFI GGGAC 3 cut(s) 1108, 1251, 1489
BslI CCNNNNNNNGG 4 cut(s) 130, 637, 980, 1066
BsmAI GTCTC 3 cut(s) 941, 1520, 1614
BsmBI CGTCTC 1 cut(s) 1614
BsmFI GGGAC 3 cut(s) 1108, 1251, 1489
BsmI GAATGC 1 cut(s) 1259
BsnI GGCC 1 cut(s) 134
Bso31I GGTCTC 1 cut(s) 1520
Bsp119I TTCGAA 3 cut(s) 164, 797, 1398
Bsp1286I GDGCHC 4 cut(s) 423, 483, 714, 1285
Bsp143I GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
Bsp19I CCATGG 1 cut(s) 587
BspACI CCGC 2 cut(s) 358, 834
BspANI GGCC 1 cut(s) 134
BspCNI CTCAG 5 cut(s) 72, 273, 616, 755, 1366
BspHI TCATGA 1 cut(s) 207
BspLI GGNNCC 3 cut(s) 191, 312, 593
BspMI ACCTGC 1 cut(s) 1412
BspPI GGATC 3 cut(s) 205, 1001, 1109
BspT104I TTCGAA 3 cut(s) 164, 797, 1398
BspT107I GGYRCC 1 cut(s) 189
BspTNI GGTCTC 1 cut(s) 1520
BsrDI GCAATG 2 cut(s) 961, 1486
BsrFI RCCGGY 1 cut(s) 250
BsrI ACTGG 3 cut(s) 955, 1015, 1246
BssAI RCCGGY 1 cut(s) 250
BssECI CCNNGG 7 cut(s) 13, 336, 549, 587, 759, 1270, 1507
BssMI GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
BssSI CACGAG 1 cut(s) 422
BssT1I CCWWGG 3 cut(s) 587, 1270, 1507
Bst2BI CACGAG 1 cut(s) 422
Bst2UI CCWGG 3 cut(s) 194, 760, 818
Bst4CI ACNGT 5 cut(s) 580, 864, 1565, 1674, 1828
Bst6I CTCTTC 3 cut(s) 184, 892, 900
BstBAI YACGTR 2 cut(s) 1313, 1331
BstBI TTCGAA 3 cut(s) 164, 797, 1398
BstC8I GCNNGC 2 cut(s) 360, 1182
BstDEI CTNAG 8 cut(s) 80, 281, 315, 368, 485, 624, 742, 1374
BstDSI CCRYGG 1 cut(s) 587
BstENI CCTNNNNNAGG 1 cut(s) 635
BstF5I GGATG 3 cut(s) 359, 435, 1594
BstKTI GATC 9 cut(s) 213, 385, 645, 996, 1104, 1162, 1299, 1633, 1735
BstMAI GTCTC 3 cut(s) 941, 1520, 1614
BstMBI GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
BstMWI GCNNNNNNNGC 3 cut(s) 386, 598, 833
BstNI CCWGG 3 cut(s) 194, 760, 818
BstNSI RCATGY 3 cut(s) 293, 1409, 1573
BstSCI CCNGG 3 cut(s) 192, 758, 816
BstSFI CTRYAG 1 cut(s) 1663
BstSLI GKGCMC 2 cut(s) 423, 483
BstV1I GCAGC 3 cut(s) 374, 705, 1753
BstV2I GAAGAC 2 cut(s) 102, 1478
BstX2I RGATCY 5 cut(s) 382, 1101, 1159, 1630, 1732
BstYI RGATCY 5 cut(s) 382, 1101, 1159, 1630, 1732
BsuI GTATCC 1 cut(s) 1686
BsuRI GGCC 1 cut(s) 134
BtgI CCRYGG 1 cut(s) 587
BtrI CACGTC 1 cut(s) 73
BtsCI GGATG 3 cut(s) 359, 435, 1594
BtsIMutI CAGTG 3 cut(s) 114, 1570, 1670
BveI ACCTGC 1 cut(s) 1412
Cac8I GCNNGC 2 cut(s) 360, 1182
CciI TCATGA 1 cut(s) 207
Cfr10I RCCGGY 1 cut(s) 250
Cfr13I GGNCC 3 cut(s) 133, 228, 628
CseI GACGC 1 cut(s) 1253
Csp6I GTAC 3 cut(s) 319, 704, 1431
CspAI ACCGGT 1 cut(s) 250
CviQI GTAC 3 cut(s) 319, 704, 1431
DdeI CTNAG 8 cut(s) 80, 281, 315, 368, 485, 624, 742, 1374
DpnI GATC 9 cut(s) 212, 384, 644, 995, 1103, 1161, 1298, 1632, 1734
DpnII GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
DrdI GACNNNNNNGTC 1 cut(s) 203
DseDI GACNNNNNNGTC 1 cut(s) 203
Eam1104I CTCTTC 3 cut(s) 184, 892, 900
EarI CTCTTC 3 cut(s) 184, 892, 900
Ecl136II GAGCTC 1 cut(s) 712
Eco130I CCWWGG 3 cut(s) 587, 1270, 1507
Eco24I GRGCYC 1 cut(s) 714
Eco31I GGTCTC 1 cut(s) 1520
Eco47I GGWCC 2 cut(s) 228, 628
Eco53kI GAGCTC 1 cut(s) 712
Eco57I CTGAAG 2 cut(s) 70, 1749
Eco72I CACGTG 1 cut(s) 1313
EcoICRI GAGCTC 1 cut(s) 712
EcoNI CCTNNNNNAGG 1 cut(s) 635
EcoO109I RGGNCCY 2 cut(s) 228, 628
EcoRII CCWGG 3 cut(s) 192, 758, 816
EcoT14I CCWWGG 3 cut(s) 587, 1270, 1507
EcoT38I GRGCYC 1 cut(s) 714
ErhI CCWWGG 3 cut(s) 587, 1270, 1507
Esp3I CGTCTC 1 cut(s) 1614
FaqI GGGAC 3 cut(s) 1108, 1251, 1489
FauI CCCGC 1 cut(s) 351
FblI GTMKAC 1 cut(s) 1459
Fnu4HI GCNGC 3 cut(s) 363, 694, 1742
FokI GGATG 3 cut(s) 366, 422, 1601
FriOI GRGCYC 1 cut(s) 714
Fsp4HI GCNGC 3 cut(s) 363, 694, 1742
FspBI CTAG 4 cut(s) 386, 470, 1157, 1628
GluI GCNGC 3 cut(s) 363, 694, 1742
GsuI CTGGAG 3 cut(s) 742, 1299, 1805
HaeIII GGCC 1 cut(s) 134
HapII CCGG 2 cut(s) 251, 1586
HgaI GACGC 1 cut(s) 1253
HincII GTYRAC 2 cut(s) 529, 867
HindII GTYRAC 2 cut(s) 529, 867
HindIII AAGCTT 2 cut(s) 599, 1773
HinfI GANTC 8 cut(s) 425, 457, 740, 821, 918, 970, 1038, 1121
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 2 cut(s) 251, 1586
HphI GGTGA 6 cut(s) 104, 914, 1046, 1346, 1575, 1811
Hpy166II GTNNAC 6 cut(s) 529, 867, 1433, 1460, 1670, 1714
Hpy188I TCNGA 7 cut(s) 14, 89, 340, 940, 998, 1375, 1705
Hpy8I GTNNAC 6 cut(s) 529, 867, 1433, 1460, 1670, 1714
Hpy99I CGWCG 1 cut(s) 266
HpyAV CCTTC 4 cut(s) 63, 493, 1420, 1717
HpyCH4III ACNGT 5 cut(s) 580, 864, 1565, 1674, 1828
HpyCH4IV ACGT 4 cut(s) 72, 264, 1312, 1330
HpyF10VI GCNNNNNNNGC 3 cut(s) 386, 598, 833
HpyF3I CTNAG 8 cut(s) 80, 281, 315, 368, 485, 624, 742, 1374
HpySE526I ACGT 4 cut(s) 72, 264, 1312, 1330
KspAI GTTAAC 1 cut(s) 529
Kzo9I GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
LmnI GCTCC 2 cut(s) 597, 1280
Lsp1109I GCAGC 3 cut(s) 374, 705, 1753
LweI GCATC 2 cut(s) 535, 1450
MaeI CTAG 4 cut(s) 386, 470, 1157, 1628
MaeII ACGT 4 cut(s) 72, 264, 1312, 1330
MaeIII GTNAC 6 cut(s) 17, 246, 829, 1303, 1565, 1595
MalI GATC 9 cut(s) 212, 384, 644, 995, 1103, 1161, 1298, 1632, 1734
MboI GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
MboII GAAGA 9 cut(s) 107, 171, 909, 917, 1198, 1391, 1478, 1742, 1778
MflI RGATCY 5 cut(s) 382, 1101, 1159, 1630, 1732
MhlI GDGCHC 4 cut(s) 423, 483, 714, 1285
MlyI GAGTC 4 cut(s) 434, 734, 1047, 1130
MmeI TCCRAC 1 cut(s) 1230
MroXI GAANNNNTTC 1 cut(s) 1202
MseI TTAA 6 cut(s) 267, 528, 603, 749, 924, 1500
MslI CAYNNNNRTG 2 cut(s) 1116, 1367
MspA1I CMGCKG 1 cut(s) 836
MspI CCGG 2 cut(s) 251, 1586
MspR9I CCNGG 3 cut(s) 194, 760, 818
Mva1269I GAATGC 1 cut(s) 1259
MvaI CCWGG 3 cut(s) 194, 760, 818
MwoI GCNNNNNNNGC 3 cut(s) 386, 598, 833
NcoI CCATGG 1 cut(s) 587
NdeII GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
NlaIV GGNNCC 3 cut(s) 191, 312, 593
NmeAIII GCCGAG 1 cut(s) 574
NmuCI GTSAC 3 cut(s) 17, 1565, 1595
NspI RCATGY 3 cut(s) 293, 1409, 1573
NspV TTCGAA 3 cut(s) 164, 797, 1398
PagI TCATGA 1 cut(s) 207
PaqCI CACCTGC 1 cut(s) 1412
PciI ACATGT 1 cut(s) 1569
PctI GAATGC 1 cut(s) 1259
PdmI GAANNNNTTC 1 cut(s) 1202
PfeI GAWTC 4 cut(s) 457, 821, 918, 970
PfoI TCCNGGA 1 cut(s) 816
PinAI ACCGGT 1 cut(s) 250
PkrI GCNGC 3 cut(s) 364, 695, 1743
PleI GAGTC 4 cut(s) 433, 734, 1046, 1129
PmaCI CACGTG 1 cut(s) 1313
PmlI CACGTG 1 cut(s) 1313
PpsI GAGTC 4 cut(s) 433, 734, 1046, 1129
Ppu21I YACGTR 2 cut(s) 1313, 1331
PpuMI RGGWCCY 2 cut(s) 228, 628
PscI ACATGT 1 cut(s) 1569
PsiI TTATAA 1 cut(s) 1242
Psp124BI GAGCTC 1 cut(s) 714
Psp5II RGGWCCY 2 cut(s) 228, 628
Psp6I CCWGG 3 cut(s) 192, 758, 816
PspCI CACGTG 1 cut(s) 1313
PspGI CCWGG 3 cut(s) 192, 758, 816
PspN4I GGNNCC 3 cut(s) 191, 312, 593
PspPI GGNCC 3 cut(s) 133, 228, 628
PspPPI RGGWCCY 2 cut(s) 228, 628
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PsuI RGATCY 5 cut(s) 382, 1101, 1159, 1630, 1732
RsaI GTAC 3 cut(s) 320, 705, 1432
RsaNI GTAC 3 cut(s) 319, 704, 1431
RseI CAYNNNNRTG 2 cut(s) 1116, 1367
SacI GAGCTC 1 cut(s) 714
SaqAI TTAA 6 cut(s) 267, 528, 603, 749, 924, 1500
SatI GCNGC 3 cut(s) 363, 694, 1742
Sau3AI GATC 9 cut(s) 210, 382, 642, 993, 1101, 1159, 1296, 1630, 1732
Sau96I GGNCC 3 cut(s) 133, 228, 628
SchI GAGTC 4 cut(s) 434, 734, 1047, 1130
ScrFI CCNGG 3 cut(s) 194, 760, 818
SduI GDGCHC 4 cut(s) 423, 483, 714, 1285
SfaNI GCATC 2 cut(s) 535, 1450
SfcI CTRYAG 1 cut(s) 1663
SfuI TTCGAA 3 cut(s) 164, 797, 1398
SinI GGWCC 2 cut(s) 228, 628
SmiMI CAYNNNNRTG 2 cut(s) 1116, 1367
SmlI CTYRAG 1 cut(s) 1646
SmoI CTYRAG 1 cut(s) 1646
SsiI CCGC 2 cut(s) 358, 834
SspMI CTAG 4 cut(s) 386, 470, 1157, 1628
SstI GAGCTC 1 cut(s) 714
StyD4I CCNGG 3 cut(s) 192, 758, 816
StyI CCWWGG 3 cut(s) 587, 1270, 1507
TaaI ACNGT 5 cut(s) 580, 864, 1565, 1674, 1828
TaiI ACGT 4 cut(s) 75, 267, 1315, 1333
TaqI TCGA 4 cut(s) 164, 797, 1041, 1398
TfiI GAWTC 4 cut(s) 457, 821, 918, 970
Tru1I TTAA 6 cut(s) 267, 528, 603, 749, 924, 1500
Tru9I TTAA 6 cut(s) 267, 528, 603, 749, 924, 1500
TscAI CASTG 3 cut(s) 121, 1570, 1677
TseFI GTSAC 3 cut(s) 17, 1565, 1595
TseI GCWGC 3 cut(s) 362, 693, 1741
Tsp45I GTSAC 3 cut(s) 17, 1565, 1595
TspDTI ATGAA 6 cut(s) 423, 424, 910, 972, 1332, 1704
TspRI CASTG 3 cut(s) 121, 1570, 1677
VpaK11BI GGWCC 2 cut(s) 228, 628
XagI CCTNNNNNAGG 1 cut(s) 635
XapI RAATTY 4 cut(s) 566, 1085, 1691, 1789
XbaI TCTAGA 1 cut(s) 1627
XceI RCATGY 3 cut(s) 293, 1409, 1573
XcmI CCANNNNNNNNNTGG 1 cut(s) 190
XmiI GTMKAC 1 cut(s) 1459
XmnI GAANNNNTTC 1 cut(s) 1202
XspI CTAG 4 cut(s) 386, 470, 1157, 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.