RchiOBHm_Chr1g0346211

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
38357842 .. 38361459
3618 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57248

Sequence Viewer

Length: 3336 bp
ATGATTCTTGAACGCAAGAGGACCTCCGATCATGTCGTGTTCCCGGTCTACTATGATATTGGTCCATCTCAATTGAGGAAGCAGGCAGAAACTCTTTCAAAGGTTCCTAAATACCAAGAAAATCAATCGTCGGAGAAGTTGAATGGATGGCGAGCAGTGCTTGGAGAAGTTGCAGATCTAGCAGGAAATGTTTTAAAAAATGAAGCTGACGGGTACGAGTCAAAGTTCATCCAAAAAATTGTTACAGTGATTCAGGACAAGCTAGGTCATGTGCCCCTGACCGATGTCCAGGAGGTGTTACAGAAGAAGTTGTTGTTTATAAACCCTTACCTCGATGACGCCGAGGGGAAGCAACTGAAATTCCCAACTGTGAAGGCATGGCTCAATGAGCTTAAAGAAGCTGTCTATGATACCGAGGACCTATTGCAGGAGATCAAGACAGAAGCATTAAGACAAAAGATGGAACCCGAATCTGGAAGTAGCACGAGTAAGGTAGAAGAGCTCAACTCTAGTCTTCCATTTCATGCTTTTGATTCAACATCAATATACCGGAGGGCAGAGGAATTTCATAAGAAACTAGACTCCATTATGGAGCGGAGAAGAGACGTCTTCGGTATGGAAGCAACTGTTGGATACAAGGTATCACAAACAACATCGTCAACTTCTTTTCTCGAAGACTCTGGTGTGTTTGGTAGAGATGACGAGAAGGAGACACTTATTGAATTGTTGCTATCAGATTATGAGAGTGGCAATAAGATAAGTGTGATTCCTATTGTGGGTATGGGTGGGATTGGAAAGACCACCCTTGCCCAATTTTTGTACAACGATGATAGAGTTGAACAACATTTTGACAAAAAAGCATGGGCTTCTGTTTCTGAAAAATTTGATGTTCTCCAGATCTCAAAAAAAATTTATGAGTCCCTTACATTAAAGGCCTGCGACGTTCAGTACTTAGATCCACTTCAGTCAATATTGAAGGCGGAATTGAAGGGGAAAAAGGTTTTCTTTGTTTTTGATGACGTGTGGAATAAGAGTTATACTGAATGGGAGAAGTTAAGGCGTCCTTTTCAATTTGGAGCACCTGGAAGTAAGATTATTGTCACAACACGCAATCAAGATGTTGCACGTATGGTGTGTACTCTTCAAGCTCACTGTCTCAGGCCACTGTCTGCAGAAGATAGCTGGTCATTATTTGAAAAACATGCCATCAAAAATACAGGTGTTGGTCCACACTCACATCTTGAAGAAATAGGTAGACAAATTGTACAAAAGTGCAATGGTCTTCCTTTGGCTATTAAGTCCCTTGGGGGTCTGTTATGTTCTAAATCAGCTGTGAAGGAATGGGAAAGTATATTGTACAGTGAGATGTGGGAGTTGCCACAGGAGGAGAGTGGCATTCTGCCATCTCTTTGGTTGAGCTATATGTACCTGCCTTCACAACTCAAACATTGTTTTGCATATTGTTCGATATTTCCCAAGAACTATGTGTTCAAAACATCAAAAATATTGGTTTACTTGTGGATGGCTGAAGATCTATTGCAACCTAAAAAACACAAAACTGCAGAAGAAATCGGACAAGATTACTTCAATGATCTAATCTCAATGTCATTTTTTCAAGTTTCATCAAGGTCCGATCAATATATCATGCATGACCTTATCAATGATCTAGCAAGCTTTGTATCAGGAGAATTTTGTTTTAGGTGGGAGGGCAGTGATTCACCCAACAATTTGAGCAAGACTCGTCACTTTTCATGTATGTCGGGATATCTTACTGCAGAGCCTGGTGGCCTAGAGATGTTTGAGGCTTTACAGCAAGCTAAACATTTGCACACCTTTCTACAATTAGATCCATATTCGTCGGTGTTGTCGATAATAGCTCCCTACAAGGCGAACAAAGGACTCTACGAGGCATTGCCAAAGTTTCAATGTTTAAGAATGCTTAAGTTATCATGGTACAAAAACAAGAAATTGCCTGATTCAATTAACAACTTGAAACATCTTAAGCACTTGGACTTGTCTTACAGTTCCATCCGTAAGTTACCTGATACAATTTGTACTTTGTATAACTTGCAAGTATTGTTGTTGTCAGACTGTGGCTACCTTACTGAACTGCCAGCCAACTTGGGAAGATTGATCAACTTGAGCCATCTGGATATTGACTGTACACCCTTGGAAAAGATGCCACCGTACATGGGTAATTTGAAAGACCTCCAGATGCTACCAGAGTTTGTGCTAGACAAACACACTGCTGGGGATAATTTGCCAGAGTTAAAGAATCTTCAAAATTTGCGTGGAAGTCTTCGTATCTCAGGGCTTGGGCATAGCAGCGGTTTGGAGGCCTACATACTGAGGGACAAGAAGTTTCTTAAGGAACTGGTTTTGGATTGGGGAGAAGAAGAGGAAACAGAAGAAGAAGAAGAGTCAAGTGAAGAAGGCAATAATACTGTAGAAGAAGTGCTTGAGAAGCTCCAACCTCACCTGGATTGGGGAGAAGAAGAGGAAACAGAAGAAGAAGAGTCAAGTGAAGAAGGCAATAATACTGTAGAAGAAGTGCTTGAGAAGCTCCAACCTCACCTGAATCTGGAAAGGCTTACAATTATAGATTATGGAGGCAAAATGTTTCCAGGTTGGTCAGAATATTATTCTTCCTCTGCTCTTGTTTATCTTAGACTTTTTAATTGTCAGAATTGTATCTCCTTGCCACCATTGGGACAACTACCTTCCCTCAGAGAGCTTGAAATTCGGGAGTTGAGTGGGTGGCAAGAATGGTCTGATGTTGGAGGTGACGATATTGAAAGTGGGGTTTTTCCTAATCTAGAGAAACTTGACGTGGGTGACTGTCCCAATCTTACTGGGAGATTAGCATCAGACAGTCTCCCATCTCTTTTGTCTTTGAAGTCATGGAAGTGCCCAGAATTTGAATGGTTTCCGGAAGATGGATTCCCGTCAAAGTTAAAATCACTTTGGATCGGGTACTGTAAAAAAGTGAATGCAGAGAGCGTGCAGAATCTGAACAAGGGTCTCCGAACACTCACCTCTCTTGAAGAATTGTCACTTGATTTTGACAGCAGCGAAAAATTAGACTGGTTTGCGGAGGAGCTGTTTCCCAGCACTCTCACATATCTTAAGATTCGCCGTTTGAATTGTGAGACCATCGACGGCGCCAAGTGGTTTGGCCATCTCAACTCTCTTCAAAAATTGGCTATTTGGGACTGCCCTAGACTCCGGTGCTTGCCAGATAGTGGGCTATCCACTTCCCTTCAACACTTGGAGATTCTGGATTGCCCTGCTCTGCAGTGCTTGCCAGATAAAACGGTGCCAAAGAGAGACGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1111

Amino Acids

126.72

Weight (kDa)

5.13

Isoelectric Point (pI)

54.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 94 9.2e-06 TIR domain
Rx_N PF18052 76 - 159 8.2e-15 Rx N-terminal domain
NB-ARC PF00931 233 - 405 1.8e-34 NB-ARC domain
WHD_DRP PF23559 490 - 557 1.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 623 - 967 6.2e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 755 - 827 4.7e-09 R13L1/DRL21 LRRs
LRR_R13L1-DRL21 PF25019 826 - 916 1.6e-21 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 320
AatII GACGTC 1 cut(s) 609
Acc36I ACCTGC 1 cut(s) 1437
AccB1I GGYRCC 2 cut(s) 3161, 3316
AccB7I CCANNNNNTGG 1 cut(s) 3242
AccBSI CCGCTC 1 cut(s) 595
AccI GTMKAC 2 cut(s) 48, 1255
AccIII TCCGGA 1 cut(s) 2929
AciI CCGC 4 cut(s) 595, 980, 2328, 3092
AclWI GGATC 3 cut(s) 950, 1841, 2975
AcoI YGGCCR 1 cut(s) 3175
AcsI RAATTY 8 cut(s) 359, 563, 881, 909, 1688, 2284, 2739, 2915
AcuI CTGAAG 2 cut(s) 947, 1548
AcyI GRCGYC 4 cut(s) 339, 606, 1060, 3162
AfiI CCNNNNNNNGG 9 cut(s) 427, 473, 776, 2192, 2485, 2581, 2708, 2936, 3242
AflII CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
AflIII ACRYGT 1 cut(s) 1020
AjiI CACGTC 2 cut(s) 1021, 2830
AjnI CCWGG 5 cut(s) 288, 1081, 1780, 2478, 2623
AjuI GAANNNNNNNTTGG 2 cut(s) 612, 644
Alw21I GWGCWC 2 cut(s) 504, 1081
Alw26I GTCTC 7 cut(s) 597, 704, 1160, 2879, 3026, 3143, 3321
AlwI GGATC 3 cut(s) 950, 1841, 2975
AlwNI CAGNNNCTG 2 cut(s) 1781, 3010
Aor13HI TCCGGA 1 cut(s) 2929
AoxI GGCC 5 cut(s) 933, 1160, 1786, 2337, 3175
ApeKI GCWGC 2 cut(s) 2325, 3069
ApoI RAATTY 8 cut(s) 359, 563, 881, 909, 1688, 2284, 2739, 2915
Asp700I GAANNNNTTC 1 cut(s) 2925
AspLEI GCGC 1 cut(s) 3164
AspS9I GGNCC 5 cut(s) 21, 62, 418, 1226, 1629
AsuC2I CCSGG 1 cut(s) 44
AsuHPI GGTGA 6 cut(s) 1710, 2468, 2564, 2795, 2846, 3025
AvaII GGWCC 5 cut(s) 21, 62, 418, 1226, 1629
BaeGI GKGCMC 2 cut(s) 276, 2912
BalI TGGCCA 1 cut(s) 3177
BanI GGYRCC 2 cut(s) 3161, 3316
BanII GRGCYC 1 cut(s) 504
BauI CACGAG 1 cut(s) 484
BbsI GAAGAC 5 cut(s) 506, 601, 681, 1274, 2291
Bbv12I GWGCWC 2 cut(s) 504, 1081
BbvI GCAGC 2 cut(s) 2337, 3081
BceAI ACGGC 2 cut(s) 3120, 3175
BcgI CGANNNNNNTGC 2 cut(s) 1446, 1480
BciT130I CCWGG 5 cut(s) 290, 1083, 1782, 2480, 2625
BciVI GTATCC 1 cut(s) 626
BclI TGATCA 1 cut(s) 2133
BcnI CCSGG 1 cut(s) 44
BcoDI GTCTC 7 cut(s) 597, 704, 1160, 2879, 3026, 3143, 3321
BfaI CTAG 9 cut(s) 179, 263, 510, 578, 1667, 1790, 2234, 2816, 3219
BfmI CTRYAG 6 cut(s) 1170, 1560, 1773, 2445, 2541, 3293
BfoI RGCGCY 1 cut(s) 3165
BfrI CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
BfuAI ACCTGC 1 cut(s) 1437
BfuI GTATCC 1 cut(s) 626
BglII AGATCT 3 cut(s) 175, 897, 1531
BisI GCNGC 2 cut(s) 2326, 3070
BlsI GCNGC 2 cut(s) 2327, 3071
BmcAI AGTACT 1 cut(s) 950
Bme1390I CCNGG 6 cut(s) 44, 290, 1083, 1782, 2480, 2625
Bme18I GGWCC 5 cut(s) 21, 62, 418, 1226, 1629
BmgBI CACGTC 2 cut(s) 1021, 2830
BmgT120I GGNCC 5 cut(s) 21, 62, 418, 1226, 1629
BmiI GGNNCC 4 cut(s) 105, 465, 3163, 3318
BmrFI CCNGG 6 cut(s) 44, 290, 1083, 1782, 2480, 2625
BmrI ACTGGG 1 cut(s) 2862
BmsI GCATC 3 cut(s) 2169, 2205, 2873
BmuI ACTGGG 1 cut(s) 2862
BoxI GACNNNNGTC 1 cut(s) 284
BpiI GAAGAC 5 cut(s) 506, 601, 681, 1274, 2291
BplI GAGNNNNNCTC 4 cut(s) 491, 523, 1723, 1755
BpmI CTGGAG 2 cut(s) 878, 2195
BpuEI CTTGAG 3 cut(s) 2161, 2480, 2576
BpuMI CCSGG 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 1127
BsaBI GATNNNNATC 1 cut(s) 2863
BsaHI GRCGYC 4 cut(s) 339, 606, 1060, 3162
BsaI GGTCTC 2 cut(s) 3026, 3143
BsaJI CCNNGG 4 cut(s) 342, 414, 1303, 2169
BsaWI WCCGGW 3 cut(s) 549, 2929, 3225
BsaXI ACNNNNNCTCC 2 cut(s) 3086, 3116
Bsc4I CCNNNNNNNGG 9 cut(s) 427, 473, 776, 2192, 2485, 2581, 2708, 2936, 3242
Bse1I ACTGG 3 cut(s) 2379, 2857, 3089
Bse3DI GCAATG 2 cut(s) 1282, 1910
Bse8I GATNNNNATC 1 cut(s) 2863
BseAI TCCGGA 1 cut(s) 2929
BseBI CCWGG 5 cut(s) 290, 1083, 1782, 2480, 2625
BseDI CCNNGG 4 cut(s) 342, 414, 1303, 2169
BseGI GGATG 4 cut(s) 152, 228, 1527, 2028
BseJI GATNNNNATC 1 cut(s) 2863
BseLI CCNNNNNNNGG 9 cut(s) 427, 473, 776, 2192, 2485, 2581, 2708, 2936, 3242
BseMI GCAATG 2 cut(s) 1282, 1910
BseMII CTCAG 4 cut(s) 1171, 2322, 2339, 2740
BseNI ACTGG 3 cut(s) 2379, 2857, 3089
BseRI GAGGAG 2 cut(s) 1400, 3110
BseSI GKGCMC 2 cut(s) 276, 2912
BseXI GCAGC 2 cut(s) 2337, 3081
BseYI CCCAGC 2 cut(s) 2249, 3107
BsgI GTGCAG 1 cut(s) 3023
BshFI GGCC 5 cut(s) 935, 1162, 1788, 2339, 3177
BshNI GGYRCC 2 cut(s) 3161, 3316
BsiHKAI GWGCWC 2 cut(s) 504, 1081
BsiSI CCGG 4 cut(s) 44, 550, 2930, 3226
BslFI GGGAC 6 cut(s) 904, 1285, 2366, 2724, 2826, 3224
BslI CCNNNNNNNGG 9 cut(s) 427, 473, 776, 2192, 2485, 2581, 2708, 2936, 3242
BsmAI GTCTC 7 cut(s) 597, 704, 1160, 2879, 3026, 3143, 3321
BsmBI CGTCTC 2 cut(s) 597, 3321
BsmFI GGGAC 6 cut(s) 904, 1285, 2366, 2724, 2826, 3224
BsmI GAATGC 3 cut(s) 1395, 1941, 2995
BsnI GGCC 5 cut(s) 935, 1162, 1788, 2339, 3177
Bso31I GGTCTC 2 cut(s) 3026, 3143
Bsp1286I GDGCHC 4 cut(s) 276, 504, 1081, 2912
Bsp13I TCCGGA 1 cut(s) 2929
Bsp1407I TGTACA 4 cut(s) 819, 1264, 1356, 2162
BspACI CCGC 4 cut(s) 595, 980, 2328, 3092
BspANI GGCC 5 cut(s) 935, 1162, 1788, 2339, 3177
BspCNI CTCAG 4 cut(s) 1170, 2321, 2340, 2739
BspEI TCCGGA 1 cut(s) 2929
BspLI GGNNCC 4 cut(s) 105, 465, 3163, 3318
BspMAI CTGCAG 4 cut(s) 1174, 1564, 1777, 3297
BspMI ACCTGC 1 cut(s) 1437
BspPI GGATC 3 cut(s) 950, 1841, 2975
BspQI GCTCTTC 1 cut(s) 492
BspT107I GGYRCC 2 cut(s) 3161, 3316
BspTI CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
BspTNI GGTCTC 2 cut(s) 3026, 3143
BsrBI CCGCTC 1 cut(s) 595
BsrDI GCAATG 2 cut(s) 1282, 1910
BsrGI TGTACA 4 cut(s) 819, 1264, 1356, 2162
BsrI ACTGG 3 cut(s) 2379, 2857, 3089
BssECI CCNNGG 4 cut(s) 342, 414, 1303, 2169
BssNI GRCGYC 4 cut(s) 339, 606, 1060, 3162
BssSI CACGAG 1 cut(s) 484
BssT1I CCWWGG 2 cut(s) 1303, 2169
Bst2BI CACGAG 1 cut(s) 484
Bst2UI CCWGG 5 cut(s) 290, 1083, 1782, 2480, 2625
Bst6I CTCTTC 8 cut(s) 492, 595, 1146, 2391, 2412, 2490, 2508, 3195
BstACI GRCGYC 4 cut(s) 339, 606, 1060, 3162
BstAFI CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
BstAPI GCANNNNNTGC 1 cut(s) 3301
BstAUI TGTACA 4 cut(s) 819, 1264, 1356, 2162
BstBAI YACGTR 1 cut(s) 1127
BstC8I GCNNGC 9 cut(s) 84, 153, 937, 1672, 1815, 2115, 3002, 3233, 3302
BstDEI CTNAG 6 cut(s) 952, 1157, 2308, 2348, 2666, 2726
BstENI CCTNNNNNAGG 1 cut(s) 425
BstF5I GGATG 4 cut(s) 152, 228, 1527, 2028
BstH2I RGCGCY 1 cut(s) 3165
BstHHI GCGC 1 cut(s) 3164
BstMAI GTCTC 7 cut(s) 597, 704, 1160, 2879, 3026, 3143, 3321
BstMWI GCNNNNNNNGC 6 cut(s) 157, 179, 388, 2464, 2560, 3301
BstNI CCWGG 5 cut(s) 290, 1083, 1782, 2480, 2625
BstNSI RCATGY 1 cut(s) 1205
BstPAI GACNNNNGTC 1 cut(s) 284
BstSCI CCNGG 6 cut(s) 42, 288, 1081, 1780, 2478, 2623
BstSFI CTRYAG 6 cut(s) 1170, 1560, 1773, 2445, 2541, 3293
BstSLI GKGCMC 2 cut(s) 276, 2912
BstV1I GCAGC 2 cut(s) 2337, 3081
BstV2I GAAGAC 5 cut(s) 506, 601, 681, 1274, 2291
BstX2I RGATCY 5 cut(s) 175, 897, 955, 1531, 1846
BstXI CCANNNNNNTGG 1 cut(s) 1410
BstYI RGATCY 5 cut(s) 175, 897, 955, 1531, 1846
BsuI GTATCC 1 cut(s) 626
BsuRI GGCC 5 cut(s) 935, 1162, 1788, 2339, 3177
BtrI CACGTC 2 cut(s) 1021, 2830
BtsCI GGATG 4 cut(s) 152, 228, 1527, 2028
BtsI GCAGTG 4 cut(s) 162, 1717, 2244, 3302
BtsIMutI CAGTG 8 cut(s) 162, 252, 1150, 1163, 1366, 1717, 2244, 3302
BveI ACCTGC 1 cut(s) 1437
Cac8I GCNNGC 9 cut(s) 84, 153, 937, 1672, 1815, 2115, 3002, 3233, 3302
CaiI CAGNNNCTG 2 cut(s) 1781, 3010
CfoI GCGC 1 cut(s) 3164
Cfr13I GGNCC 5 cut(s) 21, 62, 418, 1226, 1629
CseI GACGC 2 cut(s) 347, 1049
DdeI CTNAG 6 cut(s) 952, 1157, 2308, 2348, 2666, 2726
DinI GGCGCC 1 cut(s) 3163
DraI TTTAAA 1 cut(s) 195
EaeI YGGCCR 1 cut(s) 3175
Eam1104I CTCTTC 8 cut(s) 492, 595, 1146, 2391, 2412, 2490, 2508, 3195
EarI CTCTTC 8 cut(s) 492, 595, 1146, 2391, 2412, 2490, 2508, 3195
EciI GGCGGA 1 cut(s) 995
Ecl136II GAGCTC 1 cut(s) 502
Eco130I CCWWGG 2 cut(s) 1303, 2169
Eco147I AGGCCT 2 cut(s) 935, 2339
Eco24I GRGCYC 1 cut(s) 504
Eco31I GGTCTC 2 cut(s) 3026, 3143
Eco32I GATATC 1 cut(s) 1766
Eco47I GGWCC 5 cut(s) 21, 62, 418, 1226, 1629
Eco53kI GAGCTC 1 cut(s) 502
Eco57I CTGAAG 2 cut(s) 947, 1548
EcoICRI GAGCTC 1 cut(s) 502
EcoNI CCTNNNNNAGG 1 cut(s) 425
EcoO109I RGGNCCY 2 cut(s) 21, 418
EcoRII CCWGG 5 cut(s) 288, 1081, 1780, 2478, 2623
EcoRV GATATC 1 cut(s) 1766
EcoT14I CCWWGG 2 cut(s) 1303, 2169
EcoT22I ATGCAT 1 cut(s) 1650
EcoT38I GRGCYC 1 cut(s) 504
EgeI GGCGCC 1 cut(s) 3163
EheI GGCGCC 1 cut(s) 3163
ErhI CCWWGG 2 cut(s) 1303, 2169
Esp3I CGTCTC 2 cut(s) 597, 3321
FalI AAGNNNNNCTT 8 cut(s) 989, 1021, 1048, 1080, 2442, 2474, 2538, 2570
FaqI GGGAC 6 cut(s) 904, 1285, 2366, 2724, 2826, 3224
FbaI TGATCA 1 cut(s) 2133
FblI GTMKAC 2 cut(s) 48, 1255
Fnu4HI GCNGC 2 cut(s) 2326, 3070
FokI GGATG 4 cut(s) 159, 215, 1534, 2015
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 2 cut(s) 2326, 3070
FspBI CTAG 9 cut(s) 179, 263, 510, 578, 1667, 1790, 2234, 2816, 3219
GlaI GCGC 1 cut(s) 3163
GluI GCNGC 2 cut(s) 2326, 3070
GsaI CCCAGC 2 cut(s) 2253, 3111
GsuI CTGGAG 2 cut(s) 878, 2195
HaeII RGCGCY 1 cut(s) 3165
HaeIII GGCC 5 cut(s) 935, 1162, 1788, 2339, 3177
HapII CCGG 4 cut(s) 44, 550, 2930, 3226
HgaI GACGC 2 cut(s) 347, 1049
HhaI GCGC 1 cut(s) 3164
Hin1I GRCGYC 4 cut(s) 339, 606, 1060, 3162
Hin6I GCGC 1 cut(s) 3162
HinP1I GCGC 1 cut(s) 3162
HincII GTYRAC 1 cut(s) 660
HindII GTYRAC 1 cut(s) 660
HindIII AAGCTT 1 cut(s) 1672
HpaII CCGG 4 cut(s) 44, 550, 2930, 3226
HphI GGTGA 6 cut(s) 1710, 2468, 2564, 2795, 2846, 3025
Hpy166II GTNNAC 7 cut(s) 49, 660, 1137, 1229, 1256, 1513, 2165
Hpy8I GTNNAC 7 cut(s) 49, 660, 1137, 1229, 1256, 1513, 2165
Hpy99I CGWCG 4 cut(s) 133, 944, 1861, 3161
HpyCH4IV ACGT 5 cut(s) 606, 942, 1020, 1126, 2829
HpyF10VI GCNNNNNNNGC 6 cut(s) 157, 179, 388, 2464, 2560, 3301
HpyF3I CTNAG 6 cut(s) 952, 1157, 2308, 2348, 2666, 2726
HpySE526I ACGT 5 cut(s) 606, 942, 1020, 1126, 2829
Hsp92I GRCGYC 4 cut(s) 339, 606, 1060, 3162
HspAI GCGC 1 cut(s) 3162
KasI GGCGCC 1 cut(s) 3161
Kpn2I TCCGGA 1 cut(s) 2929
Ksp22I TGATCA 1 cut(s) 2133
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 6 cut(s) 592, 1076, 1882, 2472, 2568, 3097
Lsp1109I GCAGC 2 cut(s) 2337, 3081
LweI GCATC 3 cut(s) 2169, 2205, 2873
MaeI CTAG 9 cut(s) 179, 263, 510, 578, 1667, 1790, 2234, 2816, 3219
MaeII ACGT 5 cut(s) 606, 942, 1020, 1126, 2829
MaeIII GTNAC 8 cut(s) 241, 297, 1099, 1742, 2037, 2783, 2834, 3051
MbiI CCGCTC 1 cut(s) 595
MfeI CAATTG 1 cut(s) 71
MflI RGATCY 5 cut(s) 175, 897, 955, 1531, 1846
MhlI GDGCHC 4 cut(s) 276, 504, 1081, 2912
MlsI TGGCCA 1 cut(s) 3177
MluNI TGGCCA 1 cut(s) 3177
Mly113I GGCGCC 1 cut(s) 3162
MlyI GAGTC 9 cut(s) 227, 575, 671, 926, 1732, 1893, 2429, 2525, 3216
MmeI TCCRAC 5 cut(s) 111, 610, 2494, 2590, 2758
Mox20I TGGCCA 1 cut(s) 3177
Mph1103I ATGCAT 1 cut(s) 1650
MroI TCCGGA 1 cut(s) 2929
MroXI GAANNNNTTC 1 cut(s) 2925
MscI TGGCCA 1 cut(s) 3177
MslI CAYNNNNRTG 1 cut(s) 2905
Msp20I TGGCCA 1 cut(s) 3177
MspA1I CMGCKG 2 cut(s) 1331, 2328
MspCI CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
MspI CCGG 4 cut(s) 44, 550, 2930, 3226
MspR9I CCNGG 6 cut(s) 44, 290, 1083, 1782, 2480, 2625
MunI CAATTG 1 cut(s) 71
Mva1269I GAATGC 3 cut(s) 1395, 1941, 2995
MvaI CCWGG 5 cut(s) 290, 1083, 1782, 2480, 2625
MwoI GCNNNNNNNGC 6 cut(s) 157, 179, 388, 2464, 2560, 3301
NarI GGCGCC 1 cut(s) 3162
NciI CCSGG 1 cut(s) 44
NlaIV GGNNCC 4 cut(s) 105, 465, 3163, 3318
NmeAIII GCCGAG 1 cut(s) 367
NmuCI GTSAC 5 cut(s) 1099, 1742, 2783, 2834, 3051
NsiI ATGCAT 1 cut(s) 1650
NspI RCATGY 1 cut(s) 1205
PceI AGGCCT 2 cut(s) 935, 2339
PciSI GCTCTTC 1 cut(s) 492
PcsI WCGNNNNNNNCGW 2 cut(s) 339, 1865
PctI GAATGC 3 cut(s) 1395, 1941, 2995
PdmI GAANNNNTTC 1 cut(s) 2925
PflMI CCANNNNNTGG 1 cut(s) 3242
PfoI TCCNGGA 1 cut(s) 288
PkrI GCNGC 2 cut(s) 2327, 3071
PleI GAGTC 9 cut(s) 226, 575, 671, 925, 1732, 1893, 2428, 2524, 3216
PluTI GGCGCC 1 cut(s) 3165
PpsI GAGTC 9 cut(s) 226, 575, 671, 925, 1732, 1893, 2428, 2524, 3216
Ppu21I YACGTR 1 cut(s) 1127
PpuMI RGGWCCY 2 cut(s) 21, 418
PshAI GACNNNNGTC 1 cut(s) 284
PsiI TTATAA 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 504
Psp5II RGGWCCY 2 cut(s) 21, 418
Psp6I CCWGG 5 cut(s) 288, 1081, 1780, 2478, 2623
PspFI CCCAGC 2 cut(s) 2249, 3107
PspGI CCWGG 5 cut(s) 288, 1081, 1780, 2478, 2623
PspN4I GGNNCC 4 cut(s) 105, 465, 3163, 3318
PspPI GGNCC 5 cut(s) 21, 62, 418, 1226, 1629
PspPPI RGGWCCY 2 cut(s) 21, 418
PstI CTGCAG 4 cut(s) 1174, 1564, 1777, 3297
PstNI CAGNNNCTG 2 cut(s) 1781, 3010
PsuI RGATCY 5 cut(s) 175, 897, 955, 1531, 1846
PvuII CAGCTG 1 cut(s) 1331
RseI CAYNNNNRTG 1 cut(s) 2905
SacI GAGCTC 1 cut(s) 504
SapI GCTCTTC 1 cut(s) 492
SatI GCNGC 2 cut(s) 2326, 3070
Sau96I GGNCC 5 cut(s) 21, 62, 418, 1226, 1629
ScaI AGTACT 1 cut(s) 950
SchI GAGTC 9 cut(s) 227, 575, 671, 926, 1732, 1893, 2429, 2525, 3216
ScrFI CCNGG 6 cut(s) 44, 290, 1083, 1782, 2480, 2625
SduI GDGCHC 4 cut(s) 276, 504, 1081, 2912
SfaNI GCATC 3 cut(s) 2169, 2205, 2873
SfcI CTRYAG 6 cut(s) 1170, 1560, 1773, 2445, 2541, 3293
SfoI GGCGCC 1 cut(s) 3163
SinI GGWCC 5 cut(s) 21, 62, 418, 1226, 1629
SmiMI CAYNNNNRTG 1 cut(s) 2905
SmlI CTYRAG 7 cut(s) 1940, 2000, 2140, 2366, 2459, 2555, 3125
SmoI CTYRAG 7 cut(s) 1940, 2000, 2140, 2366, 2459, 2555, 3125
SseBI AGGCCT 2 cut(s) 935, 2339
SsiI CCGC 4 cut(s) 595, 980, 2328, 3092
SspDI GGCGCC 1 cut(s) 3161
SspI AATATT 3 cut(s) 972, 1506, 2639
SspMI CTAG 9 cut(s) 179, 263, 510, 578, 1667, 1790, 2234, 2816, 3219
SstI GAGCTC 1 cut(s) 504
StuI AGGCCT 2 cut(s) 935, 2339
StyD4I CCNGG 6 cut(s) 42, 288, 1081, 1780, 2478, 2623
StyI CCWWGG 2 cut(s) 1303, 2169
TaiI ACGT 5 cut(s) 609, 945, 1023, 1129, 2832
TaqI TCGA 5 cut(s) 333, 672, 1466, 1868, 3156
TaqII GACCGA 1 cut(s) 296
TatI WGTACW 7 cut(s) 819, 948, 1136, 1264, 1356, 2054, 2162
TscAI CASTG 8 cut(s) 162, 252, 1157, 1170, 1366, 1717, 2251, 3302
TseFI GTSAC 5 cut(s) 1099, 1742, 2783, 2834, 3051
TseI GCWGC 2 cut(s) 2325, 3069
Tsp45I GTSAC 5 cut(s) 1099, 1742, 2783, 2834, 3051
TspDTI ATGAA 6 cut(s) 216, 217, 512, 557, 1611, 1740
TspGWI ACGGA 1 cut(s) 2021
TspRI CASTG 8 cut(s) 162, 252, 1157, 1170, 1366, 1717, 2251, 3302
Van91I CCANNNNNTGG 1 cut(s) 3242
Vha464I CTTAAG 4 cut(s) 1940, 2000, 2366, 3125
VpaK11BI GGWCC 5 cut(s) 21, 62, 418, 1226, 1629
XagI CCTNNNNNAGG 1 cut(s) 425
XapI RAATTY 8 cut(s) 359, 563, 881, 909, 1688, 2284, 2739, 2915
XbaI TCTAGA 1 cut(s) 2815
XceI RCATGY 1 cut(s) 1205
XcmI CCANNNNNNNNNTGG 1 cut(s) 2919
XmiI GTMKAC 2 cut(s) 48, 1255
XmnI GAANNNNTTC 1 cut(s) 2925
XspI CTAG 9 cut(s) 179, 263, 510, 578, 1667, 1790, 2234, 2816, 3219
ZraI GACGTC 1 cut(s) 607
ZrmI AGTACT 1 cut(s) 950
Zsp2I ATGCAT 1 cut(s) 1650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.