Rmu_sc0000907.1_g000034

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000907.1
Physical Location & Seq
Reverse (-)
162129 .. 166014
3886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000907.1_g000034.1.cds

Sequence Viewer

Length: 3726 bp
atggctctgtcccgagttcacaaggcctcccattccagatctacttcttcttctccatctggacttggttatgacgtgttcctgagcttcagaggtgaagacacccgaaagaacttcactgatcacctctacacggcccttgtcaacgcccgatttcgaactttccgggatgaccctgaactcgagagaggggaaaatatcaaggaaaagctcgagaatgccattcgacagtcacggagttctgtgattgtgttttcgaaagactacacctcttccagatggtgtctggacgagcttgtcatgatccttgaactcaagaggagctccgatcatgttgtgttaccggtcttctacgacgtcgatccatcccacgtgaggaagcaggcagaaactctttcaaaggttcctaaataccaagaaaatcaatcctcggagaagttgaatggatggcgggcagcacttctagaagttgcagatctagcaggaatggttttacaaaatgaagccgacgggcatgagtcaaagttcatccaaaagattgttaaagtgattcaagacaagctaggttgtgtgtccctaagtgatgttcagaaggaattagaggagaagttgttgtctgttaaccctgttcttgatgacgccgaggggaagcaactgaaattccaaaccactgtgaagccatggctccataagcttaaagaggccgtctatgaggctgaggacctgttgcaggagatcaaaactgaagcattgaggcaaaagatagaacacgaatatgggagtagcacgagtaaggtacaagagcccatctctactccatctcatgctcttgactcagctttaatatactccagggcagagcaagttcttgaaagactagacaacatttcaaagcagacaaaagatgccctggattggaaagcaaccgctggacacagagtatcacaaacactaccgtcaacttctttggtagaaaagtctgtatatggaagagatgaagagaaagaaagattgattaaattattgctatcagatgatgagactggcaatgaaataggtgtgattcctattgtgggtatgggtggaatcgggaagaccacccttgcccagtttgtatacaatgatgttagagtgaaggaacattttcacctccaagcatgggcttgcgtttcaaaagaatttgatgtttttaggatctggcaacacatttatgagtccctcaccccagaacgttgccaaagcacaaacctagatctgcttctatcaaagttgcaggcaactttgagggggaaaagggtcttctttgttcttgatgacatctggaacgagaattataaccagttggaattcttaatgcgtccccttgagtttggagcacatggaagcaagattattgtcacaacacgcagtcaagatgttgcacgtatgatgggtagccttgaagctcagcatctcaggccaatgtctgaggaagatagctggtcgttattcgaaaaacatgccttaaaaaatgcagctgttggtgcacactcgaatcttgaaaaaatcggtagacaagttgttcaaaagtgcaatggtcttcctttggctattaagtcccttgggggtctcttactatctaaattgttagtggaggaatgggaaagtatattgaacagcgacatgtgggagttctcaccggatgagagtgacattctgccatctctatggttgagctatctagatctgcctctacatctcaagcgttgttttgcctattgttcactatatcccaagaactatgaatttgaaagatcagagttggtttacttgtggaaggctgaagatctattgcaacataaaaaaaacaaaacggcagaagaagtcggacaagactacttcaatgatctaatctcaagatcattttttcaactttcatcaatttctgatcgatatttcatcatgcatgaccttatcaatgatatagcaagctttgtatctggagaattttgttttaggtgggagggcagtgattcacctgacagtttgagcaagactcgtcatttttcagataatcatgatggagctaatagcgtcgagatgtttgaggctttacagcaagctaaatgtttgcgcacctttctatcaataaaaccacgttggagatggatgttcgaaaaaaaatgtgatatattgccaaaatcacaatgtttaagagtgctcaagttagatgggtacgatattaaggaattgcctgattcaattaacaacttcaaacatcttacgtacttgaacttgtctcggactttcatcaaaaggttacctgatacagtttgtactttgtataacttgcaagcattgttgttgtcacagtgctgggaccttactgagctgccagccaacttgggaagattgatcaacttgagccatctggatgtatcatttacagggataaaaaagatgccaccacaaatgggtaagttgaaagatctccagatgctacccgagtttgtgctggacaaacacaatgctggggagaatttggcagagttacggaagcttgaaaaattgcgtggaactctttgtatctcagggcttgtgcacagcagcggtttggaggcctacatactgagggacaagaagtttcttaaggaattggttttgatttggagaggaagggattcaagtgaagaaggcaataatactgtagaagaaagagaagtgcttgagaagcttcaacctcacatgaacctggaaaggcttacaattgaaggttatggaggcaaaatgtttgcaggttggtcggaatatttttcttcctctgctcttgttcatcttaaacttgctaattgtgagaattgtatctccttgccaccattgggacagctaccttccctcacagaacttgatatttctgggtttcatggagtggtgtccataggttccgaattcttttgtggtgagggcaatactactacctgtgtgaataaaccatttagatatctacgggttttagaattctatgatatgagtgagtggcaagaatggtcttatgttggaggtgaggaaaatgaaggtgggatttttcctaatcttgagaagcttgttctatcatcatgtcccaatcttaccggtaggttaatgtcagacagtctcccatctctcgtgtctttggtggtatggcattgcccagaattcgaatgttttccaacagatggattccagtcaaagttaaaatcacttgacatcagcgactgtaaaggtgtgaatgcaaagagtatgcagaatctgaacaagggtctccgaacactcacctctcttcggtctcttgaaagattgtcacttgaatttgactgcgacgaaaatgtagattggtttgcggaggagcaggaggggctgtttcccagcactctcacatatctcgagatcagccgtctgagttgtgagaccatcaactgcgccaagtggtttggccatctcaactctcttcaagaattggttattgacgactgctctgcgctccggtgcttgccagatagtgggctacccacttctctgaaaaccttgaagattacgggttgccctgctctgtgttgcttgccagatagtggactaccctcttctctttctgatctacgtatcattcaatgtcctttgcttgagaaacggtgccaaagagagacgggtgaagattggcccaagattgctcacatcaagcacaaaaggatcaatttcaaaatgatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1241

Amino Acids

141.46

Weight (kDa)

5.75

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1335
AasI GACNNNNNNGTC 1 cut(s) 296
AatII GACGTC 1 cut(s) 360
Acc16I TGCGCA 1 cut(s) 2114
Acc36I ACCTGC 1 cut(s) 2765
AccB1I GGYRCC 1 cut(s) 3648
AccB7I CCANNNNNTGG 3 cut(s) 3194, 3518, 3587
AccI GTMKAC 2 cut(s) 1116, 1552
AciI CCGC 4 cut(s) 451, 927, 2589, 3359
AclI AACGTT 1 cut(s) 1231
AclWI GGATC 4 cut(s) 298, 356, 1202, 3713
AcoI YGGCCR 1 cut(s) 3451
AcuI CTGAAG 3 cut(s) 73, 765, 1842
AcvI CACGTG 1 cut(s) 373
AcyI GRCGYC 2 cut(s) 357, 639
AfaI GTAC 4 cut(s) 798, 2216, 2267, 2317
AflII CTTAAG 1 cut(s) 2627
AflIII ACRYGT 2 cut(s) 75, 1662
AgeI ACCGGT 2 cut(s) 343, 3110
AjiI CACGTC 1 cut(s) 76
AjnI CCWGG 3 cut(s) 851, 909, 2730
Alw21I GWGCWC 5 cut(s) 326, 1378, 1528, 2202, 2583
Alw26I GTCTC 8 cut(s) 1034, 1613, 2283, 3137, 3284, 3309, 3419, 3653
Alw44I GTGCAC 2 cut(s) 1524, 2579
AlwI GGATC 4 cut(s) 298, 356, 1202, 3713
AlwNI CAGNNNCTG 2 cut(s) 3234, 3268
Ama87I CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
AoxI GGCC 7 cut(s) 24, 135, 702, 1457, 2598, 3451, 3674
ApaLI GTGCAC 2 cut(s) 1524, 2579
ApeKI GCWGC 4 cut(s) 455, 1514, 2371, 2586
AsiGI ACCGGT 2 cut(s) 343, 3110
Asp700I GAANNNNTTC 3 cut(s) 1143, 2659, 3183
AspLEI GCGC 3 cut(s) 2115, 3440, 3499
AspS9I GGNCC 4 cut(s) 136, 721, 2359, 3675
AsuC2I CCSGG 1 cut(s) 167
AsuII TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
AvaI CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
AvaII GGWCC 2 cut(s) 721, 2359
BaeGI GKGCMC 2 cut(s) 1528, 2583
BalI TGGCCA 1 cut(s) 3453
BanI GGYRCC 1 cut(s) 3648
BanII GRGCYC 2 cut(s) 326, 807
BauI CACGAG 2 cut(s) 787, 3143
BbrPI CACGTG 1 cut(s) 373
BbsI GAAGAC 5 cut(s) 105, 340, 1100, 1291, 1571
Bbv12I GWGCWC 5 cut(s) 326, 1378, 1528, 2202, 2583
BbvCI CCTCAGC 1 cut(s) 717
BbvI GCAGC 4 cut(s) 467, 1526, 2358, 2598
BceAI ACGGC 4 cut(s) 150, 689, 1869, 3396
BcgI CGANNNNNNTGC 6 cut(s) 1481, 1515, 2763, 2797, 3476, 3510
BciT130I CCWGG 3 cut(s) 853, 911, 2732
BclI TGATCA 2 cut(s) 121, 2394
BcnI CCSGG 1 cut(s) 167
BcoDI GTCTC 8 cut(s) 1034, 1613, 2283, 3137, 3284, 3309, 3419, 3653
BfaI CTAG 6 cut(s) 464, 479, 563, 878, 1250, 1721
BfmI CTRYAG 1 cut(s) 2685
BfrI CTTAAG 1 cut(s) 2627
BfuAI ACCTGC 1 cut(s) 2765
BglII AGATCT 6 cut(s) 38, 475, 1252, 1723, 1825, 2467
BisI GCNGC 4 cut(s) 456, 1515, 2372, 2587
BlpI GCTNAGC 1 cut(s) 1446
BlsI GCNGC 4 cut(s) 457, 1516, 2373, 2588
Bme1390I CCNGG 4 cut(s) 167, 853, 911, 2732
Bme18I GGWCC 2 cut(s) 721, 2359
BmeT110I CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
BmgBI CACGTC 1 cut(s) 76
BmgT120I GGNCC 4 cut(s) 136, 721, 2359, 3675
BmiI GGNNCC 5 cut(s) 405, 686, 2360, 2923, 3650
BmrFI CCNGG 4 cut(s) 167, 853, 911, 2732
BmrI ACTGGG 1 cut(s) 1102
BmsI GCATC 4 cut(s) 895, 1459, 2430, 2466
BmuI ACTGGG 1 cut(s) 1102
BpiI GAAGAC 5 cut(s) 105, 340, 1100, 1291, 1571
BplI GAGNNNNNCTC 4 cut(s) 794, 826, 2020, 2052
BpmI CTGGAG 3 cut(s) 835, 2001, 2456
Bpu10I CCTNAGC 2 cut(s) 83, 717
Bpu1102I GCTNAGC 1 cut(s) 1446
Bpu14I TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
BpuEI CTTGAG 9 cut(s) 299, 1385, 1724, 1879, 2186, 2422, 2726, 3095, 3659
BpuMI CCSGG 1 cut(s) 167
Bsa29I ATCGAT 1 cut(s) 1930
BsaAI YACGTR 4 cut(s) 373, 1424, 2265, 3617
BsaHI GRCGYC 2 cut(s) 357, 639
BsaI GGTCTC 4 cut(s) 1613, 3284, 3309, 3419
BsaJI CCNNGG 6 cut(s) 429, 642, 680, 852, 909, 1600
BsaWI WCCGGW 4 cut(s) 343, 1678, 3110, 3501
BsaXI ACNNNNNCTCC 6 cut(s) 11, 41, 596, 626, 3362, 3392
Bse118I RCCGGY 2 cut(s) 343, 3110
Bse1I ACTGG 4 cut(s) 1048, 1108, 1339, 3202
Bse3DI GCAATG 3 cut(s) 1054, 1579, 3163
BseBI CCWGG 3 cut(s) 853, 911, 2732
BseCI ATCGAT 1 cut(s) 1930
BseDI CCNNGG 6 cut(s) 429, 642, 680, 852, 909, 1600
BseGI GGATG 7 cut(s) 175, 365, 452, 528, 1687, 2154, 2419
BseMI GCAATG 3 cut(s) 1054, 1579, 3163
BseNI ACTGG 4 cut(s) 1048, 1108, 1339, 3202
BseRI GAGGAG 3 cut(s) 334, 617, 3377
BseSI GKGCMC 2 cut(s) 1528, 2583
BseXI GCAGC 4 cut(s) 467, 1526, 2358, 2598
BseYI CCCAGC 3 cut(s) 2355, 2510, 3383
BshFI GGCC 7 cut(s) 26, 137, 704, 1459, 2600, 3453, 3676
BshNI GGYRCC 1 cut(s) 3648
BshTI ACCGGT 2 cut(s) 343, 3110
BshVI ATCGAT 1 cut(s) 1930
BsiHKAI GWGCWC 5 cut(s) 326, 1378, 1528, 2202, 2583
BsiHKCI CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
BsiSI CCGG 5 cut(s) 166, 344, 1679, 3111, 3502
BslFI GGGAC 8 cut(s) 559, 1201, 1344, 1582, 2372, 2627, 2874, 3084
BsmAI GTCTC 8 cut(s) 1034, 1613, 2283, 3137, 3284, 3309, 3419, 3653
BsmBI CGTCTC 1 cut(s) 3653
BsmFI GGGAC 8 cut(s) 559, 1201, 1344, 1582, 2372, 2627, 2874, 3084
BsmI GAATGC 2 cut(s) 223, 3253
BsnI GGCC 7 cut(s) 26, 137, 704, 1459, 2600, 3453, 3676
Bso31I GGTCTC 4 cut(s) 1613, 3284, 3309, 3419
BsoBI CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
Bsp119I TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
Bsp1286I GDGCHC 6 cut(s) 326, 807, 1378, 1528, 2202, 2583
Bsp1720I GCTNAGC 1 cut(s) 1446
Bsp19I CCATGG 1 cut(s) 680
BspACI CCGC 4 cut(s) 451, 927, 2589, 3359
BspANI GGCC 7 cut(s) 26, 137, 704, 1459, 2600, 3453, 3676
BspDI ATCGAT 1 cut(s) 1930
BspHI TCATGA 2 cut(s) 300, 2056
BspLI GGNNCC 5 cut(s) 405, 686, 2360, 2923, 3650
BspMI ACCTGC 1 cut(s) 2765
BspPI GGATC 4 cut(s) 298, 356, 1202, 3713
BspT104I TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
BspT107I GGYRCC 1 cut(s) 3648
BspTI CTTAAG 1 cut(s) 2627
BspTNI GGTCTC 4 cut(s) 1613, 3284, 3309, 3419
BsrDI GCAATG 3 cut(s) 1054, 1579, 3163
BsrFI RCCGGY 2 cut(s) 343, 3110
BsrI ACTGG 4 cut(s) 1048, 1108, 1339, 3202
BssAI RCCGGY 2 cut(s) 343, 3110
BssECI CCNNGG 6 cut(s) 429, 642, 680, 852, 909, 1600
BssNAI GTATAC 1 cut(s) 1117
BssNI GRCGYC 2 cut(s) 357, 639
BssSI CACGAG 2 cut(s) 787, 3143
BssT1I CCWWGG 2 cut(s) 680, 1600
Bst1107I GTATAC 1 cut(s) 1117
Bst2BI CACGAG 2 cut(s) 787, 3143
Bst2UI CCWGG 3 cut(s) 853, 911, 2732
Bst6I CTCTTC 6 cut(s) 277, 985, 993, 3303, 3471, 3604
BstACI GRCGYC 2 cut(s) 357, 639
BstAFI CTTAAG 1 cut(s) 2627
BstBAI YACGTR 4 cut(s) 373, 1424, 2265, 3617
BstBI TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
BstDSI CCRYGG 1 cut(s) 680
BstEII GGTNACC 1 cut(s) 2298
BstENI CCTNNNNNAGG 1 cut(s) 728
BstF5I GGATG 7 cut(s) 175, 365, 452, 528, 1687, 2154, 2419
BstHHI GCGC 3 cut(s) 2115, 3440, 3499
BstMAI GTCTC 8 cut(s) 1034, 1613, 2283, 3137, 3284, 3309, 3419, 3653
BstMWI GCNNNNNNNGC 6 cut(s) 479, 691, 1456, 1523, 2710, 3373
BstNI CCWGG 3 cut(s) 853, 911, 2732
BstNSI RCATGY 2 cut(s) 1502, 1666
BstPI GGTNACC 1 cut(s) 2298
BstSCI CCNGG 4 cut(s) 165, 851, 909, 2730
BstSFI CTRYAG 1 cut(s) 2685
BstSLI GKGCMC 2 cut(s) 1528, 2583
BstSNI TACGTA 2 cut(s) 2265, 3617
BstV1I GCAGC 4 cut(s) 467, 1526, 2358, 2598
BstV2I GAAGAC 5 cut(s) 105, 340, 1100, 1291, 1571
BstX2I RGATCY 7 cut(s) 38, 475, 1194, 1252, 1723, 1825, 2467
BstXI CCANNNNNNTGG 1 cut(s) 1707
BstYI RGATCY 7 cut(s) 38, 475, 1194, 1252, 1723, 1825, 2467
BstZ17I GTATAC 1 cut(s) 1117
Bsu15I ATCGAT 1 cut(s) 1930
BsuRI GGCC 7 cut(s) 26, 137, 704, 1459, 2600, 3453, 3676
BsuTUI ATCGAT 1 cut(s) 1930
BtgI CCRYGG 1 cut(s) 680
BtrI CACGTC 1 cut(s) 76
BtsCI GGATG 7 cut(s) 175, 365, 452, 528, 1687, 2154, 2419
BtsI GCAGTG 1 cut(s) 2014
BtsIMutI CAGTG 4 cut(s) 117, 669, 2014, 2357
BveI ACCTGC 1 cut(s) 2765
CaiI CAGNNNCTG 2 cut(s) 3234, 3268
CciI TCATGA 2 cut(s) 300, 2056
CfoI GCGC 3 cut(s) 2115, 3440, 3499
Cfr10I RCCGGY 2 cut(s) 343, 3110
Cfr13I GGNCC 4 cut(s) 136, 721, 2359, 3675
ClaI ATCGAT 1 cut(s) 1930
CseI GACGC 3 cut(s) 647, 1346, 2062
Csp6I GTAC 4 cut(s) 797, 2215, 2266, 2316
CspAI ACCGGT 2 cut(s) 343, 3110
CviQI GTAC 4 cut(s) 797, 2215, 2266, 2316
DrdI GACNNNNNNGTC 1 cut(s) 296
DseDI GACNNNNNNGTC 1 cut(s) 296
EaeI YGGCCR 1 cut(s) 3451
Eam1104I CTCTTC 6 cut(s) 277, 985, 993, 3303, 3471, 3604
EarI CTCTTC 6 cut(s) 277, 985, 993, 3303, 3471, 3604
Ecl136II GAGCTC 1 cut(s) 324
Eco105I TACGTA 2 cut(s) 2265, 3617
Eco130I CCWWGG 2 cut(s) 680, 1600
Eco147I AGGCCT 2 cut(s) 26, 2600
Eco24I GRGCYC 2 cut(s) 326, 807
Eco31I GGTCTC 4 cut(s) 1613, 3284, 3309, 3419
Eco32I GATATC 1 cut(s) 2981
Eco47I GGWCC 2 cut(s) 721, 2359
Eco53kI GAGCTC 1 cut(s) 324
Eco57I CTGAAG 3 cut(s) 73, 765, 1842
Eco72I CACGTG 1 cut(s) 373
Eco88I CYCGRG 5 cut(s) 12, 182, 212, 2483, 3401
Eco91I GGTNACC 1 cut(s) 2298
EcoICRI GAGCTC 1 cut(s) 324
EcoNI CCTNNNNNAGG 1 cut(s) 728
EcoO109I RGGNCCY 2 cut(s) 721, 2359
EcoO65I GGTNACC 1 cut(s) 2298
EcoRI GAATTC 4 cut(s) 1346, 2927, 2996, 3173
EcoRII CCWGG 3 cut(s) 851, 909, 2730
EcoRV GATATC 1 cut(s) 2981
EcoT14I CCWWGG 2 cut(s) 680, 1600
EcoT22I ATGCAT 1 cut(s) 1947
EcoT38I GRGCYC 2 cut(s) 326, 807
ErhI CCWWGG 2 cut(s) 680, 1600
Esp3I CGTCTC 1 cut(s) 3653
FaqI GGGAC 8 cut(s) 559, 1201, 1344, 1582, 2372, 2627, 2874, 3084
FauI CCCGC 1 cut(s) 444
FbaI TGATCA 2 cut(s) 121, 2394
FblI GTMKAC 2 cut(s) 1116, 1552
Fnu4HI GCNGC 4 cut(s) 456, 1515, 2372, 2587
FokI GGATG 7 cut(s) 182, 352, 459, 515, 1694, 2161, 2426
FriOI GRGCYC 2 cut(s) 326, 807
Fsp4HI GCNGC 4 cut(s) 456, 1515, 2372, 2587
FspBI CTAG 6 cut(s) 464, 479, 563, 878, 1250, 1721
FspI TGCGCA 1 cut(s) 2114
GlaI GCGC 3 cut(s) 2114, 3439, 3498
GluI GCNGC 4 cut(s) 456, 1515, 2372, 2587
GsaI CCCAGC 3 cut(s) 2359, 2514, 3387
GsuI CTGGAG 3 cut(s) 835, 2001, 2456
HaeIII GGCC 7 cut(s) 26, 137, 704, 1459, 2600, 3453, 3676
HapII CCGG 5 cut(s) 166, 344, 1679, 3111, 3502
HgaI GACGC 3 cut(s) 647, 1346, 2062
HhaI GCGC 3 cut(s) 2115, 3440, 3499
Hin1I GRCGYC 2 cut(s) 357, 639
Hin6I GCGC 3 cut(s) 2113, 3438, 3497
HinP1I GCGC 3 cut(s) 2113, 3438, 3497
HincII GTYRAC 3 cut(s) 145, 622, 960
HindII GTYRAC 3 cut(s) 145, 622, 960
HindIII AAGCTT 5 cut(s) 692, 1969, 2537, 2711, 3080
HpaI GTTAAC 1 cut(s) 622
HpaII CCGG 5 cut(s) 166, 344, 1679, 3111, 3502
Hpy99I CGWCG 5 cut(s) 359, 362, 512, 2078, 3341
HpyAV CCTTC 8 cut(s) 586, 1129, 1810, 2649, 2666, 2744, 2880, 3047
HpyCH4IV ACGT 8 cut(s) 75, 357, 372, 1231, 1423, 2137, 2264, 3616
HpyF10VI GCNNNNNNNGC 6 cut(s) 479, 691, 1456, 1523, 2710, 3373
HpySE526I ACGT 8 cut(s) 75, 357, 372, 1231, 1423, 2137, 2264, 3616
Hsp92I GRCGYC 2 cut(s) 357, 639
HspAI GCGC 3 cut(s) 2113, 3438, 3497
Ksp22I TGATCA 2 cut(s) 121, 2394
KspAI GTTAAC 1 cut(s) 622
LmnI GCTCC 7 cut(s) 321, 329, 690, 1373, 2063, 3364, 3504
Lsp1109I GCAGC 4 cut(s) 467, 1526, 2358, 2598
LweI GCATC 4 cut(s) 895, 1459, 2430, 2466
MaeI CTAG 6 cut(s) 464, 479, 563, 878, 1250, 1721
MaeII ACGT 8 cut(s) 75, 357, 372, 1231, 1423, 2137, 2264, 3616
MaeIII GTNAC 8 cut(s) 231, 339, 1396, 1688, 2298, 2346, 2529, 3318
MfeI CAATTG 1 cut(s) 2745
MflI RGATCY 7 cut(s) 38, 475, 1194, 1252, 1723, 1825, 2467
MhlI GDGCHC 6 cut(s) 326, 807, 1378, 1528, 2202, 2583
MlsI TGGCCA 1 cut(s) 3453
MluNI TGGCCA 1 cut(s) 3453
MlyI GAGTC 4 cut(s) 527, 827, 1223, 2029
MmeI TCCRAC 6 cut(s) 1323, 1846, 2120, 2763, 3016, 3212
Mox20I TGGCCA 1 cut(s) 3453
Mph1103I ATGCAT 1 cut(s) 1947
MroXI GAANNNNTTC 3 cut(s) 1143, 2659, 3183
MscI TGGCCA 1 cut(s) 3453
MslI CAYNNNNRTG 4 cut(s) 774, 1209, 1705, 2412
Msp20I TGGCCA 1 cut(s) 3453
MspA1I CMGCKG 3 cut(s) 929, 1517, 2589
MspCI CTTAAG 1 cut(s) 2627
MspI CCGG 5 cut(s) 166, 344, 1679, 3111, 3502
MspR9I CCNGG 4 cut(s) 167, 853, 911, 2732
MunI CAATTG 1 cut(s) 2745
Mva1269I GAATGC 2 cut(s) 223, 3253
MvaI CCWGG 3 cut(s) 853, 911, 2732
MwoI GCNNNNNNNGC 6 cut(s) 479, 691, 1456, 1523, 2710, 3373
NciI CCSGG 1 cut(s) 167
NcoI CCATGG 1 cut(s) 680
NlaIV GGNNCC 5 cut(s) 405, 686, 2360, 2923, 3650
NmeAIII GCCGAG 1 cut(s) 667
NmuCI GTSAC 5 cut(s) 231, 1396, 1688, 2346, 3318
NsbI TGCGCA 1 cut(s) 2114
NsiI ATGCAT 1 cut(s) 1947
NspI RCATGY 2 cut(s) 1502, 1666
NspV TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
PaeR7I CTCGAG 3 cut(s) 182, 212, 3401
PagI TCATGA 2 cut(s) 300, 2056
PceI AGGCCT 2 cut(s) 26, 2600
PciI ACATGT 1 cut(s) 1662
PctI GAATGC 2 cut(s) 223, 3253
PdmI GAANNNNTTC 3 cut(s) 1143, 2659, 3183
PfeI GAWTC 9 cut(s) 550, 1063, 1086, 1534, 2012, 2237, 2660, 3198, 3265
PflMI CCANNNNNTGG 3 cut(s) 3194, 3518, 3587
PfoI TCCNGGA 1 cut(s) 165
PinAI ACCGGT 2 cut(s) 343, 3110
PkrI GCNGC 4 cut(s) 457, 1516, 2373, 2588
PleI GAGTC 4 cut(s) 526, 827, 1222, 2029
PmaCI CACGTG 1 cut(s) 373
PmlI CACGTG 1 cut(s) 373
PpsI GAGTC 4 cut(s) 526, 827, 1222, 2029
Ppu21I YACGTR 4 cut(s) 373, 1424, 2265, 3617
PpuMI RGGWCCY 2 cut(s) 721, 2359
PscI ACATGT 1 cut(s) 1662
PsiI TTATAA 1 cut(s) 1335
Psp124BI GAGCTC 1 cut(s) 326
Psp1406I AACGTT 1 cut(s) 1231
Psp5II RGGWCCY 2 cut(s) 721, 2359
Psp6I CCWGG 3 cut(s) 851, 909, 2730
PspCI CACGTG 1 cut(s) 373
PspEI GGTNACC 1 cut(s) 2298
PspFI CCCAGC 3 cut(s) 2355, 2510, 3383
PspGI CCWGG 3 cut(s) 851, 909, 2730
PspN4I GGNNCC 5 cut(s) 405, 686, 2360, 2923, 3650
PspPI GGNCC 4 cut(s) 136, 721, 2359, 3675
PspPPI RGGWCCY 2 cut(s) 721, 2359
PstNI CAGNNNCTG 2 cut(s) 3234, 3268
PsuI RGATCY 7 cut(s) 38, 475, 1194, 1252, 1723, 1825, 2467
PvuII CAGCTG 1 cut(s) 1517
RsaI GTAC 4 cut(s) 798, 2216, 2267, 2317
RsaNI GTAC 4 cut(s) 797, 2215, 2266, 2316
RseI CAYNNNNRTG 4 cut(s) 774, 1209, 1705, 2412
SacI GAGCTC 1 cut(s) 326
SatI GCNGC 4 cut(s) 456, 1515, 2372, 2587
Sau96I GGNCC 4 cut(s) 136, 721, 2359, 3675
SchI GAGTC 4 cut(s) 527, 827, 1223, 2029
ScrFI CCNGG 4 cut(s) 167, 853, 911, 2732
SduI GDGCHC 6 cut(s) 326, 807, 1378, 1528, 2202, 2583
SfaNI GCATC 4 cut(s) 895, 1459, 2430, 2466
SfcI CTRYAG 1 cut(s) 2685
Sfr274I CTCGAG 3 cut(s) 182, 212, 3401
SfuI TTCGAA 5 cut(s) 157, 257, 1491, 2154, 3177
SinI GGWCC 2 cut(s) 721, 2359
SlaI CTCGAG 3 cut(s) 182, 212, 3401
SmiMI CAYNNNNRTG 4 cut(s) 774, 1209, 1705, 2412
SnaBI TACGTA 2 cut(s) 2265, 3617
SseBI AGGCCT 2 cut(s) 26, 2600
SsiI CCGC 4 cut(s) 451, 927, 2589, 3359
SspI AATATT 1 cut(s) 2789
SspMI CTAG 6 cut(s) 464, 479, 563, 878, 1250, 1721
SstI GAGCTC 1 cut(s) 326
StuI AGGCCT 2 cut(s) 26, 2600
StyD4I CCNGG 4 cut(s) 165, 851, 909, 2730
StyI CCWWGG 2 cut(s) 680, 1600
TaiI ACGT 8 cut(s) 78, 360, 375, 1234, 1426, 2140, 2267, 3619
TaqII GACCGA 1 cut(s) 3291
TatI WGTACW 1 cut(s) 2315
TfiI GAWTC 9 cut(s) 550, 1063, 1086, 1534, 2012, 2237, 2660, 3198, 3265
TscAI CASTG 4 cut(s) 124, 676, 2014, 2357
TseFI GTSAC 5 cut(s) 231, 1396, 1688, 2346, 3318
TseI GCWGC 4 cut(s) 455, 1514, 2371, 2586
Tsp45I GTSAC 5 cut(s) 231, 1396, 1688, 2346, 3318
TspGWI ACGGA 2 cut(s) 250, 2548
TspRI CASTG 4 cut(s) 124, 676, 2014, 2357
Van91I CCANNNNNTGG 3 cut(s) 3194, 3518, 3587
Vha464I CTTAAG 1 cut(s) 2627
VneI GTGCAC 2 cut(s) 1524, 2579
VpaK11BI GGWCC 2 cut(s) 721, 2359
XagI CCTNNNNNAGG 1 cut(s) 728
XbaI TCTAGA 2 cut(s) 463, 1720
XceI RCATGY 2 cut(s) 1502, 1666
XcmI CCANNNNNNNNNTGG 2 cut(s) 283, 2142
XhoI CTCGAG 3 cut(s) 182, 212, 3401
XmiI GTMKAC 2 cut(s) 1116, 1552
XmnI GAANNNNTTC 3 cut(s) 1143, 2659, 3183
XspI CTAG 6 cut(s) 464, 479, 563, 878, 1250, 1721
ZraI GACGTC 1 cut(s) 358
Zsp2I ATGCAT 1 cut(s) 1947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.