Rorug01G0180200

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
24729065 .. 24731737
2673 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0180200.1

Sequence Viewer

Length: 1713 bp
ATGTGGGTGAAAGCACGGCAACACAAGAATGGTAACTTCAAAGCAGTTGAGCAAAAGTTAAAGCAGAAAGAGTCTGATGGATCGATTACCACACAAGGTTCTGATGATGTGCTCACTTTGGCGTTGAGGAGACCCGAGCATCCTGGTAGGGTACGAGGAGTTGGAGGTTATATGAAACCAGCTTCATTCTTTGACCTGCCTAAACGGCGAAAGAAAAGTGTTGAAGAGAATGAGGAGAGAGAAAGAGTGGTTGCTGAGGAGTGTGCATATTGGACGGCCAAGTTTGCAGAATTGGCGGCAAAGATTGATGGAAAGAAGCTGCCATTAGAGTTACCAAAACCTGTCACACCCCTTCAATATCCTGGTTCAGGACAAGGGAGTTGTTCCCGACATGCTGAGAAAGTTATGCAGAATAATCCGGACGGTGAGCTCAATGCAGTGAAGAAGAGGTTGATTTTAAATGATGATGCAGCTAGACTGTTAGTTGAAGAGAACCATGAAGTTCCAGAAGGGAACCACAAAGTAACGGCAATAATCGAGGAGGAGGTTAGAGACATCATGGCTCCCAAAACTTCAGCAAATGATGATCTGGAGACGACTGCTGCGGTGCATGAGTGTGAACTGGCAGTAGATAGGGTGGACAACATTGTTGCTATTGGAACAATTATTCAAGTGAATGTTGCATCGAGCGATCAGCTGATACATGGTGTTCCATTGGGAAAGGAAAATATGCGCGTCTCAGTTGTTCGAGCCATTGTTGATGATGCCCTATTACCTATTCCAGTGAAGGATGAAATTGTCACTGTCAGCGACGCCATTGGTACTTGTGTTGCCTGGCCAAGAAACCTGGTTGTTATCCCTGGAGAAAAGGCACCCCCTCAAGCCATTCAGCAGAAGAAAAAAAATCGTGCTAATACCAAGAAGAGAATGAGAGATGTATTTGATGACAATGAAGACCTTGAAAACTTGCCACCGAATCTGCCAATGACATTAAAGGATTTGTGCACGTGGGGGAACAATTTCCTTAGAGACGGGGTCACCATCCACACAACATTTGCTGCGGACCTTTTCGGCCGTTCAAAGAAAGCATGTCTGTTTAGAAGTGATCTCTATGCCATGGCCAACAAGCTAGAAGTATCAAATTGTGTACTTGTGTTTTACATGAGCTACCTTCATGAAGTCTTGAAGAAGTGTAAGATGGTGGATATGGTTGCCTTTGTCGATCCTTATCAGACTGGTACACTTGGGTGTGGAAATCCCACTGAAAGGGCTCGGTCTTTGTCAGATCGCTATAGGCAAGGGAGGTTAGGGCAAATCTTTGTGGTTCCATATAACTCAGGTGCTCATTGGATGTTGACGGTTGTGAACCCAAATGAAGAAGTCGTGCACTTCATGGATCCACTTAAAAGGCGACTCGATACTGGGGAATGGAAATCTATTGTCAACAACTCCATTAAAATGTATAATGCTCACAAGAATCGGAAAGGAAGGAAAGTAATTCAATGGAAGAATCTTGCTGGTATTCCGGAGCAAAAAAATAACAAGACTTGTGGATATTTCATTATGCGTTACATGAAAGAAATTGTGGAGGACAAGAACTTGGATTTTAGTATTAAGTGGGGAACGAGGTCAAATTTGGTTTACACAGACAAGGATATTGATGAGATCCGAGCGGAATGGGCTAAGCATGTTTTGAAGTTTCCAGAAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

570

Amino Acids

64.49

Weight (kDa)

8.76

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 201 - 286 5.2e-13 Domain of unknown function (DUF8039)
Peptidase_C48 PF02902 440 - 563 3e-11 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 204
AccB1I GGYRCC 1 cut(s) 871
AccBSI CCGCTC 1 cut(s) 1673
AccII CGCG 1 cut(s) 735
AccIII TCCGGA 2 cut(s) 418, 1525
AciI CCGC 4 cut(s) 296, 605, 1061, 1673
AclWI GGATC 5 cut(s) 88, 1217, 1391, 1404, 1660
AcoI YGGCCR 4 cut(s) 276, 836, 1072, 1119
AcsI RAATTY 1 cut(s) 1633
AcuI CTGAAG 1 cut(s) 558
AcvI CACGTG 1 cut(s) 1008
AcyI GRCGYC 1 cut(s) 813
AfaI GTAC 4 cut(s) 153, 823, 1149, 1240
AfiI CCNNNNNNNGG 2 cut(s) 368, 1266
AjnI CCWGG 5 cut(s) 142, 361, 833, 846, 859
AleI CACNNNNGTG 1 cut(s) 1246
AluBI AGCT 7 cut(s) 182, 319, 430, 473, 697, 1129, 1167
AluI AGCT 7 cut(s) 182, 319, 430, 473, 697, 1129, 1167
Alw21I GWGCWC 5 cut(s) 114, 432, 1007, 1345, 1389
Alw26I GTCTC 5 cut(s) 124, 546, 587, 742, 1023
Alw44I GTGCAC 2 cut(s) 1003, 1385
AlwI GGATC 5 cut(s) 88, 1217, 1391, 1404, 1660
Ama87I CYCGRG 1 cut(s) 134
Aor13HI TCCGGA 2 cut(s) 418, 1525
AoxI GGCC 4 cut(s) 276, 836, 1072, 1119
ApaLI GTGCAC 2 cut(s) 1003, 1385
ApeKI GCWGC 4 cut(s) 319, 470, 602, 1058
ApoI RAATTY 1 cut(s) 1633
Asp700I GAANNNNTTC 1 cut(s) 1019
AspLEI GCGC 1 cut(s) 735
AspS9I GGNCC 1 cut(s) 1063
AsuHPI GGTGA 3 cut(s) 19, 437, 1030
AvaI CYCGRG 1 cut(s) 134
AvaII GGWCC 1 cut(s) 1063
BaeGI GKGCMC 2 cut(s) 1007, 1389
BaeI ACNNNNGTAYC 2 cut(s) 813, 846
BalI TGGCCA 2 cut(s) 838, 1121
BamHI GGATCC 1 cut(s) 1396
BanI GGYRCC 1 cut(s) 871
BanII GRGCYC 2 cut(s) 432, 1273
BbrPI CACGTG 1 cut(s) 1008
BbsI GAAGAC 1 cut(s) 960
Bbv12I GWGCWC 5 cut(s) 114, 432, 1007, 1345, 1389
BbvCI CCTCAGC 1 cut(s) 255
BbvI GCAGC 4 cut(s) 306, 482, 589, 1045
BccI CCATC 4 cut(s) 71, 302, 1049, 1192
BceAI ACGGC 5 cut(s) 32, 221, 291, 543, 1059
BciT130I CCWGG 5 cut(s) 144, 363, 835, 848, 861
BcoDI GTCTC 5 cut(s) 124, 546, 587, 742, 1023
BfaI CTAG 2 cut(s) 474, 1130
BfmI CTRYAG 1 cut(s) 1291
BfuAI ACCTGC 1 cut(s) 204
BglI GCCNNNNNGGC 1 cut(s) 205
BisI GCNGC 5 cut(s) 297, 320, 471, 603, 1059
BlpI GCTNAGC 1 cut(s) 1683
BlsI GCNGC 5 cut(s) 298, 321, 472, 604, 1060
Bme1390I CCNGG 5 cut(s) 144, 363, 835, 848, 861
Bme18I GGWCC 1 cut(s) 1063
BmeT110I CYCGRG 1 cut(s) 134
BmgT120I GGNCC 1 cut(s) 1063
BmiI GGNNCC 5 cut(s) 515, 564, 873, 1326, 1398
BmrFI CCNGG 5 cut(s) 144, 363, 835, 848, 861
BmrI ACTGGG 1 cut(s) 1431
BmsI GCATC 4 cut(s) 148, 457, 692, 754
BmuI ACTGGG 1 cut(s) 1431
BpiI GAAGAC 1 cut(s) 960
BpmI CTGGAG 2 cut(s) 611, 882
Bpu10I CCTNAGC 1 cut(s) 255
Bpu1102I GCTNAGC 1 cut(s) 1683
BpuEI CTTGAG 1 cut(s) 864
Bsa29I ATCGAT 1 cut(s) 83
BsaAI YACGTR 1 cut(s) 1008
BsaBI GATNNNNATC 1 cut(s) 1227
BsaHI GRCGYC 1 cut(s) 813
BsaI GGTCTC 1 cut(s) 124
BsaJI CCNNGG 2 cut(s) 859, 1116
BsaWI WCCGGW 2 cut(s) 418, 1525
Bsc4I CCNNNNNNNGG 2 cut(s) 368, 1266
Bse1I ACTGG 4 cut(s) 627, 782, 1240, 1426
Bse8I GATNNNNATC 1 cut(s) 1227
BseAI TCCGGA 2 cut(s) 418, 1525
BseBI CCWGG 5 cut(s) 144, 363, 835, 848, 861
BseCI ATCGAT 1 cut(s) 83
BseDI CCNNGG 2 cut(s) 859, 1116
BseGI GGATG 4 cut(s) 139, 796, 1041, 1356
BseJI GATNNNNATC 1 cut(s) 1227
BseLI CCNNNNNNNGG 2 cut(s) 368, 1266
BseMII CTCAG 4 cut(s) 246, 387, 753, 1350
BseNI ACTGG 4 cut(s) 627, 782, 1240, 1426
BseRI GAGGAG 6 cut(s) 142, 171, 248, 272, 554, 557
BseSI GKGCMC 2 cut(s) 1007, 1389
BseX3I CGGCCG 1 cut(s) 1072
BseXI GCAGC 4 cut(s) 306, 482, 589, 1045
Bsh1236I CGCG 1 cut(s) 735
Bsh1285I CGRYCG 1 cut(s) 1075
BshFI GGCC 4 cut(s) 278, 838, 1074, 1121
BshNI GGYRCC 1 cut(s) 871
BshVI ATCGAT 1 cut(s) 83
BsiEI CGRYCG 1 cut(s) 1075
BsiHKAI GWGCWC 5 cut(s) 114, 432, 1007, 1345, 1389
BsiHKCI CYCGRG 1 cut(s) 134
BsiSI CCGG 2 cut(s) 419, 1526
BslI CCNNNNNNNGG 2 cut(s) 368, 1266
BsmAI GTCTC 5 cut(s) 124, 546, 587, 742, 1023
BsmBI CGTCTC 3 cut(s) 587, 742, 1023
BsnI GGCC 4 cut(s) 278, 838, 1074, 1121
Bso31I GGTCTC 1 cut(s) 124
BsoBI CYCGRG 1 cut(s) 134
Bsp1286I GDGCHC 6 cut(s) 114, 432, 1007, 1273, 1345, 1389
Bsp13I TCCGGA 2 cut(s) 418, 1525
Bsp143I GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
Bsp1720I GCTNAGC 1 cut(s) 1683
Bsp19I CCATGG 1 cut(s) 1116
BspACI CCGC 4 cut(s) 296, 605, 1061, 1673
BspANI GGCC 4 cut(s) 278, 838, 1074, 1121
BspCNI CTCAG 4 cut(s) 247, 388, 752, 1349
BspDI ATCGAT 1 cut(s) 83
BspEI TCCGGA 2 cut(s) 418, 1525
BspFNI CGCG 1 cut(s) 735
BspHI TCATGA 1 cut(s) 1174
BspLI GGNNCC 5 cut(s) 515, 564, 873, 1326, 1398
BspMI ACCTGC 1 cut(s) 204
BspPI GGATC 5 cut(s) 88, 1217, 1391, 1404, 1660
BspT107I GGYRCC 1 cut(s) 871
BspTNI GGTCTC 1 cut(s) 124
BsrBI CCGCTC 1 cut(s) 1673
BsrI ACTGG 4 cut(s) 627, 782, 1240, 1426
BssECI CCNNGG 2 cut(s) 859, 1116
BssMI GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
BssNI GRCGYC 1 cut(s) 813
BssT1I CCWWGG 1 cut(s) 1116
Bst2UI CCWGG 5 cut(s) 144, 363, 835, 848, 861
Bst4CI ACNGT 4 cut(s) 425, 480, 805, 1360
Bst6I CTCTTC 4 cut(s) 219, 440, 483, 917
BstACI GRCGYC 1 cut(s) 813
BstBAI YACGTR 1 cut(s) 1008
BstDEI CTNAG 6 cut(s) 255, 396, 739, 1025, 1336, 1683
BstDSI CCRYGG 1 cut(s) 1116
BstEII GGTNACC 1 cut(s) 1036
BstENI CCTNNNNNAGG 1 cut(s) 366
BstF5I GGATG 4 cut(s) 139, 796, 1041, 1356
BstFNI CGCG 1 cut(s) 735
BstHHI GCGC 1 cut(s) 735
BstKTI GATC 8 cut(s) 83, 589, 694, 1108, 1225, 1288, 1399, 1668
BstMAI GTCTC 5 cut(s) 124, 546, 587, 742, 1023
BstMBI GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
BstMCI CGRYCG 1 cut(s) 1075
BstMWI GCNNNNNNNGC 4 cut(s) 205, 284, 293, 1679
BstNI CCWGG 5 cut(s) 144, 363, 835, 848, 861
BstNSI RCATGY 3 cut(s) 395, 1092, 1691
BstPI GGTNACC 1 cut(s) 1036
BstSCI CCNGG 5 cut(s) 142, 361, 833, 846, 859
BstSFI CTRYAG 1 cut(s) 1291
BstSLI GKGCMC 2 cut(s) 1007, 1389
BstUI CGCG 1 cut(s) 735
BstV1I GCAGC 4 cut(s) 306, 482, 589, 1045
BstV2I GAAGAC 1 cut(s) 960
BstX2I RGATCY 2 cut(s) 1396, 1665
BstYI RGATCY 2 cut(s) 1396, 1665
BstZI CGGCCG 1 cut(s) 1072
Bsu15I ATCGAT 1 cut(s) 83
BsuRI GGCC 4 cut(s) 278, 838, 1074, 1121
BsuTUI ATCGAT 1 cut(s) 83
BtgI CCRYGG 1 cut(s) 1116
BtsCI GGATG 4 cut(s) 139, 796, 1041, 1356
BtsI GCAGTG 1 cut(s) 444
BtsIMutI CAGTG 4 cut(s) 444, 789, 801, 1260
BveI ACCTGC 1 cut(s) 204
CciI TCATGA 1 cut(s) 1174
CfoI GCGC 1 cut(s) 735
Cfr13I GGNCC 1 cut(s) 1063
ClaI ATCGAT 1 cut(s) 83
CseI GACGC 2 cut(s) 724, 821
CsiI ACCWGGT 1 cut(s) 846
Csp6I GTAC 4 cut(s) 152, 822, 1148, 1239
CspCI CAANNNNNGTGG 2 cut(s) 1531, 1566
CviQI GTAC 4 cut(s) 152, 822, 1148, 1239
DdeI CTNAG 6 cut(s) 255, 396, 739, 1025, 1336, 1683
DpnI GATC 8 cut(s) 82, 588, 693, 1107, 1224, 1287, 1398, 1667
DpnII GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
DraI TTTAAA 1 cut(s) 459
EaeI YGGCCR 4 cut(s) 276, 836, 1072, 1119
EagI CGGCCG 1 cut(s) 1072
Eam1104I CTCTTC 4 cut(s) 219, 440, 483, 917
EarI CTCTTC 4 cut(s) 219, 440, 483, 917
Ecl136II GAGCTC 1 cut(s) 430
EclXI CGGCCG 1 cut(s) 1072
Eco130I CCWWGG 1 cut(s) 1116
Eco24I GRGCYC 2 cut(s) 432, 1273
Eco31I GGTCTC 1 cut(s) 124
Eco47I GGWCC 1 cut(s) 1063
Eco52I CGGCCG 1 cut(s) 1072
Eco53kI GAGCTC 1 cut(s) 430
Eco57I CTGAAG 1 cut(s) 558
Eco72I CACGTG 1 cut(s) 1008
Eco88I CYCGRG 1 cut(s) 134
Eco91I GGTNACC 1 cut(s) 1036
EcoICRI GAGCTC 1 cut(s) 430
EcoNI CCTNNNNNAGG 1 cut(s) 366
EcoO65I GGTNACC 1 cut(s) 1036
EcoRII CCWGG 5 cut(s) 142, 361, 833, 846, 859
EcoT14I CCWWGG 1 cut(s) 1116
EcoT38I GRGCYC 2 cut(s) 432, 1273
ErhI CCWWGG 1 cut(s) 1116
Esp3I CGTCTC 3 cut(s) 587, 742, 1023
Fnu4HI GCNGC 5 cut(s) 297, 320, 471, 603, 1059
FokI GGATG 4 cut(s) 126, 803, 1028, 1363
FriOI GRGCYC 2 cut(s) 432, 1273
Fsp4HI GCNGC 5 cut(s) 297, 320, 471, 603, 1059
FspBI CTAG 2 cut(s) 474, 1130
GlaI GCGC 1 cut(s) 734
GluI GCNGC 5 cut(s) 297, 320, 471, 603, 1059
GsuI CTGGAG 2 cut(s) 611, 882
HaeIII GGCC 4 cut(s) 278, 838, 1074, 1121
HapII CCGG 2 cut(s) 419, 1526
HgaI GACGC 2 cut(s) 724, 821
HhaI GCGC 1 cut(s) 735
Hin1I GRCGYC 1 cut(s) 813
Hin6I GCGC 1 cut(s) 733
HinP1I GCGC 1 cut(s) 733
HincII GTYRAC 2 cut(s) 1356, 1444
HindII GTYRAC 2 cut(s) 1356, 1444
HinfI GANTC 5 cut(s) 71, 976, 1413, 1477, 1510
HpaII CCGG 2 cut(s) 419, 1526
HphI GGTGA 3 cut(s) 19, 437, 1030
Hpy188I TCNGA 6 cut(s) 76, 103, 1233, 1285, 1482, 1670
Hpy188III TCNNGA 9 cut(s) 369, 387, 419, 506, 590, 1175, 1183, 1526, 1703
Hpy99I CGWCG 1 cut(s) 815
HpyAV CCTTC 5 cut(s) 362, 503, 781, 1181, 1482
HpyCH4III ACNGT 4 cut(s) 425, 480, 805, 1360
HpyCH4IV ACGT 1 cut(s) 1007
HpyCH4V TGCA 9 cut(s) 266, 287, 409, 437, 470, 610, 683, 1005, 1387
HpyF10VI GCNNNNNNNGC 4 cut(s) 205, 284, 293, 1679
HpyF3I CTNAG 6 cut(s) 255, 396, 739, 1025, 1336, 1683
HpySE526I ACGT 1 cut(s) 1007
Hsp92I GRCGYC 1 cut(s) 813
HspAI GCGC 1 cut(s) 733
Kpn2I TCCGGA 2 cut(s) 418, 1525
Kzo9I GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
LmnI GCTCC 2 cut(s) 568, 1528
Lsp1109I GCAGC 4 cut(s) 306, 482, 589, 1045
LweI GCATC 4 cut(s) 148, 457, 692, 754
MabI ACCWGGT 1 cut(s) 846
MaeI CTAG 2 cut(s) 474, 1130
MaeII ACGT 1 cut(s) 1007
MaeIII GTNAC 7 cut(s) 32, 330, 343, 523, 799, 1036, 1568
MalI GATC 8 cut(s) 82, 588, 693, 1107, 1224, 1287, 1398, 1667
MbiI CCGCTC 1 cut(s) 1673
MboI GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
MflI RGATCY 2 cut(s) 1396, 1665
MhlI GDGCHC 6 cut(s) 114, 432, 1007, 1273, 1345, 1389
MlsI TGGCCA 2 cut(s) 838, 1121
MluCI AATT 9 cut(s) 290, 663, 795, 1018, 1141, 1497, 1581, 1633, 1708
MluNI TGGCCA 2 cut(s) 838, 1121
MlyI GAGTC 2 cut(s) 80, 1407
MmeI TCCRAC 1 cut(s) 142
Mox20I TGGCCA 2 cut(s) 838, 1121
MroI TCCGGA 2 cut(s) 418, 1525
MroXI GAANNNNTTC 1 cut(s) 1019
MscI TGGCCA 2 cut(s) 838, 1121
MseI TTAA 7 cut(s) 59, 458, 992, 1404, 1455, 1614, 1711
MslI CAYNNNNRTG 4 cut(s) 27, 615, 1246, 1457
Msp20I TGGCCA 2 cut(s) 838, 1121
MspA1I CMGCKG 1 cut(s) 697
MspI CCGG 2 cut(s) 419, 1526
MspR9I CCNGG 5 cut(s) 144, 363, 835, 848, 861
MvaI CCWGG 5 cut(s) 144, 363, 835, 848, 861
MvnI CGCG 1 cut(s) 735
MwoI GCNNNNNNNGC 4 cut(s) 205, 284, 293, 1679
NcoI CCATGG 1 cut(s) 1116
NdeII GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
NlaIV GGNNCC 5 cut(s) 515, 564, 873, 1326, 1398
NmuCI GTSAC 3 cut(s) 343, 799, 1036
NspI RCATGY 3 cut(s) 395, 1092, 1691
OliI CACNNNNGTG 1 cut(s) 1246
PagI TCATGA 1 cut(s) 1174
PdmI GAANNNNTTC 1 cut(s) 1019
PfeI GAWTC 3 cut(s) 976, 1477, 1510
PflFI GACNNNGTC 1 cut(s) 1034
PkrI GCNGC 5 cut(s) 298, 321, 472, 604, 1060
PleI GAGTC 2 cut(s) 79, 1407
PmaCI CACGTG 1 cut(s) 1008
PmlI CACGTG 1 cut(s) 1008
PpsI GAGTC 2 cut(s) 79, 1407
Ppu21I YACGTR 1 cut(s) 1008
Psp124BI GAGCTC 1 cut(s) 432
Psp6I CCWGG 5 cut(s) 142, 361, 833, 846, 859
PspCI CACGTG 1 cut(s) 1008
PspEI GGTNACC 1 cut(s) 1036
PspGI CCWGG 5 cut(s) 142, 361, 833, 846, 859
PspN4I GGNNCC 5 cut(s) 515, 564, 873, 1326, 1398
PspPI GGNCC 1 cut(s) 1063
PsuI RGATCY 2 cut(s) 1396, 1665
PsyI GACNNNGTC 1 cut(s) 1034
PvuII CAGCTG 1 cut(s) 697
RsaI GTAC 4 cut(s) 153, 823, 1149, 1240
RsaNI GTAC 4 cut(s) 152, 822, 1148, 1239
RseI CAYNNNNRTG 4 cut(s) 27, 615, 1246, 1457
SacI GAGCTC 1 cut(s) 432
SaqAI TTAA 7 cut(s) 59, 458, 992, 1404, 1455, 1614, 1711
SatI GCNGC 5 cut(s) 297, 320, 471, 603, 1059
Sau3AI GATC 8 cut(s) 80, 586, 691, 1105, 1222, 1285, 1396, 1665
Sau96I GGNCC 1 cut(s) 1063
SchI GAGTC 2 cut(s) 80, 1407
ScrFI CCNGG 5 cut(s) 144, 363, 835, 848, 861
SduI GDGCHC 6 cut(s) 114, 432, 1007, 1273, 1345, 1389
SexAI ACCWGGT 1 cut(s) 846
SfaNI GCATC 4 cut(s) 148, 457, 692, 754
SfcI CTRYAG 1 cut(s) 1291
SinI GGWCC 1 cut(s) 1063
SmiMI CAYNNNNRTG 4 cut(s) 27, 615, 1246, 1457
SmlI CTYRAG 1 cut(s) 879
SmoI CTYRAG 1 cut(s) 879
Sse9I AATT 9 cut(s) 290, 663, 795, 1018, 1141, 1497, 1581, 1633, 1708
SsiI CCGC 4 cut(s) 296, 605, 1061, 1673
SspMI CTAG 2 cut(s) 474, 1130
SstI GAGCTC 1 cut(s) 432
StyD4I CCNGG 5 cut(s) 142, 361, 833, 846, 859
StyI CCWWGG 1 cut(s) 1116
TaaI ACNGT 4 cut(s) 425, 480, 805, 1360
TaiI ACGT 1 cut(s) 1010
TaqI TCGA 6 cut(s) 83, 537, 686, 748, 1221, 1416
TaqII GACCGA 1 cut(s) 1263
TasI AATT 9 cut(s) 290, 663, 795, 1018, 1141, 1497, 1581, 1633, 1708
TatI WGTACW 1 cut(s) 1147
TauI GCSGC 1 cut(s) 299
TfiI GAWTC 3 cut(s) 976, 1477, 1510
Tru1I TTAA 7 cut(s) 59, 458, 992, 1404, 1455, 1614, 1711
Tru9I TTAA 7 cut(s) 59, 458, 992, 1404, 1455, 1614, 1711
TscAI CASTG 4 cut(s) 444, 789, 808, 1267
TseFI GTSAC 3 cut(s) 343, 799, 1036
TseI GCWGC 4 cut(s) 319, 470, 602, 1058
Tsp45I GTSAC 3 cut(s) 343, 799, 1036
TspRI CASTG 4 cut(s) 444, 789, 808, 1267
Tth111I GACNNNGTC 1 cut(s) 1034
VneI GTGCAC 2 cut(s) 1003, 1385
VpaK11BI GGWCC 1 cut(s) 1063
XagI CCTNNNNNAGG 1 cut(s) 366
XapI RAATTY 1 cut(s) 1633
XceI RCATGY 3 cut(s) 395, 1092, 1691
XmnI GAANNNNTTC 1 cut(s) 1019
XspI CTAG 2 cut(s) 474, 1130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.