Rh5DG316800

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
40673620 .. 40703872
30253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG316800.1

Sequence Viewer

Length: 1302 bp
ATGGCTCTGGAAATTGTGGGTGGTGCTTTTCTCTCTTCTGCTCTTGGTGTTCTGTTTGATAGGATGGCTTCCCGTCCGGTTGTTGACTTCATCCGAGGAAAGAAGATCACCGCTGGGCTGCTCCATAAGTTGAAGATTAAGTTGTTGTTGGTTAATAAGTTGCTCGATGATGCAGAGGAGAAGCAACTCAGAAACTCTAGAGTCAGGGAATGGCTTGATGAGCTTAAAGATGTTCTCTATCATGCAGACGACCTGTTGGATGAGATAAAGACTGAAGCTCTGCGTTGCAAGATGGAACAAGAAGATTCTGGAAGCAGCAGCACAAATCAGGTACTCAAGTTTAGTTCTATTTCCATTCAAGAACTTGACAAAAGTCTGGAACCCAGGATACTGGACGTTCTTGACAGATTAGAAGTTATTGTCAACGAAAAAGATGTGCTTGATTTGAAAGAGGGTGTTCAGGATAGACCACAAGCAAGACTGCCTACAACTTCTTTGGTAGAAGAGTCTAGTGTATATGGAAGGGATGAAGAAAAGGAGGCCATTATCAAGTTATTGTTAGCGGATGCTAATGCAGGGCTGGGTGATGCCGAAGAGAAGCAAACTGAAAAGAAAGCGGTTAAGGCATGGCTTGGTGAGCTTAAAGAGACTCTTAATGAAGCAGATAGCCTGCTCAATGAGATAGGCAGTGAAGCTCGGCAACGCATGCTGGAAGAAGGTGAATTTGGAAGCAGCAGCACAAATGAAAAGAAAGCGCTTGGTTTGAGAGATGAGTTAACATTTGGCCTAGAAGAAAGCTTACCCACAACATCTTTCCAAGAGGACTCTGGTGTGTTGTATGGAAGGGACGAAGCCAAGGAGATCATTGTCAAGTTACTATTATCAGATGATGCGTCGACATCCACCTTAAATCGTGTAAGGTTTTTGGGTGGTGGTCTGTTTAAGATTTGTGGTGGCATACCGGTGCTGAGGTACGATCTTACAGATCCGGCAGGAGAGGATGTAGATGGTTGGATCGCGAGGGAAGATGATGGCTACGGGGGTTTGGATCAGCACAGCTTTCTTCTTTTTTTTTATCAGCACGGTGGTTTGGGTCTTCTCTGTGGTGGCGATGTCGTCTTGCGCAGTAGGTGGCTTTTGACCGGTGAGTCTGATTCTGTTGCTGTCGGCAGCCTTAGTCTGTCTGGGTCCATCGGTGGTGCAGATAGCAGAGGTTTCTCTTCTTTGGAGCTGCGACATCGGTGGGCTGGAAAGCTGCTTTCGAGTCGGCGGTGGACATGGTGGATGAGCCACATGCACTGA

Protein Analysis

433

Amino Acids

48.01

Weight (kDa)

4.88

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 102 4.8e-18 Rx N-terminal domain
Rx_N PF18052 174 - 236 3.8e-07 Rx N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1147
Acc16I TGCGCA 1 cut(s) 1124
AccI GTMKAC 1 cut(s) 896
AccII CGCG 1 cut(s) 1019
AciI CCGC 4 cut(s) 111, 563, 617, 1270
AclWI GGATC 3 cut(s) 980, 1022, 1056
AcsI RAATTY 1 cut(s) 722
AcuI CTGAAG 1 cut(s) 294
AfaI GTAC 2 cut(s) 333, 974
AfeI AGCGCT 1 cut(s) 756
AgeI ACCGGT 2 cut(s) 961, 1142
AgsI TTSAA 3 cut(s) 133, 359, 448
AjnI CCWGG 1 cut(s) 383
AjuI GAANNNNNNNTTGG 2 cut(s) 708, 740
AluBI AGCT 8 cut(s) 223, 278, 640, 695, 798, 1059, 1231, 1255
AluI AGCT 8 cut(s) 223, 278, 640, 695, 798, 1059, 1231, 1255
Alw26I GTCTC 1 cut(s) 641
AlwI GGATC 3 cut(s) 980, 1022, 1056
Aor51HI AGCGCT 1 cut(s) 756
AoxI GGCC 2 cut(s) 540, 784
ApeKI GCWGC 8 cut(s) 118, 315, 318, 732, 735, 1170, 1231, 1255
ApoI RAATTY 1 cut(s) 722
AsiGI ACCGGT 2 cut(s) 961, 1142
AspLEI GCGC 2 cut(s) 757, 1125
AspS9I GGNCC 1 cut(s) 1188
AsuHPI GGTGA 5 cut(s) 100, 596, 647, 731, 1157
AvaII GGWCC 1 cut(s) 1188
BaeI ACNNNNGTAYC 2 cut(s) 323, 356
BarI GAAGNNNNNNTAC 2 cut(s) 783, 815
BbsI GAAGAC 1 cut(s) 1088
BbvCI CCTCAGC 1 cut(s) 968
BbvI GCAGC 8 cut(s) 105, 327, 330, 744, 747, 1182, 1218, 1242
BccI CCATC 5 cut(s) 58, 286, 1001, 1025, 1199
BciT130I CCWGG 1 cut(s) 385
BciVI GTATCC 1 cut(s) 381
BcoDI GTCTC 1 cut(s) 641
BfaI CTAG 3 cut(s) 198, 510, 788
BfoI RGCGCY 1 cut(s) 758
BfuI GTATCC 1 cut(s) 381
BisI GCNGC 8 cut(s) 119, 316, 319, 733, 736, 1171, 1232, 1256
BlsI GCNGC 8 cut(s) 120, 317, 320, 734, 737, 1172, 1233, 1257
Bme1390I CCNGG 1 cut(s) 385
Bme18I GGWCC 1 cut(s) 1188
BmgT120I GGNCC 1 cut(s) 1188
BmiI GGNNCC 2 cut(s) 381, 1189
BmrFI CCNGG 1 cut(s) 385
BmsI GCATC 4 cut(s) 160, 556, 577, 880
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 1 cut(s) 1088
Bpu10I CCTNAGC 1 cut(s) 968
BpuEI CTTGAG 1 cut(s) 320
BsaJI CCNNGG 3 cut(s) 94, 383, 855
BsaWI WCCGGW 3 cut(s) 76, 961, 1142
BsaXI ACNNNNNCTCC 2 cut(s) 987, 1017
Bse118I RCCGGY 2 cut(s) 961, 1142
Bse1I ACTGG 1 cut(s) 396
BseBI CCWGG 1 cut(s) 385
BseDI CCNNGG 3 cut(s) 94, 383, 855
BseGI GGATG 8 cut(s) 69, 90, 265, 532, 571, 899, 1006, 1290
BseMII CTCAG 2 cut(s) 202, 959
BseNI ACTGG 1 cut(s) 396
BseRI GAGGAG 1 cut(s) 191
BseXI GCAGC 8 cut(s) 105, 327, 330, 744, 747, 1182, 1218, 1242
BseYI CCCAGC 2 cut(s) 113, 580
BsgI GTGCAG 1 cut(s) 1221
Bsh1236I CGCG 1 cut(s) 1019
BshFI GGCC 2 cut(s) 542, 786
BshTI ACCGGT 2 cut(s) 961, 1142
BsiSI CCGG 4 cut(s) 77, 962, 989, 1143
BslFI GGGAC 1 cut(s) 860
BsmAI GTCTC 1 cut(s) 641
BsmFI GGGAC 1 cut(s) 860
BsnI GGCC 2 cut(s) 542, 786
Bsp143I GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
Bsp68I TCGCGA 1 cut(s) 1019
BspACI CCGC 4 cut(s) 111, 563, 617, 1270
BspANI GGCC 2 cut(s) 542, 786
BspCNI CTCAG 2 cut(s) 201, 960
BspFNI CGCG 1 cut(s) 1019
BspLI GGNNCC 2 cut(s) 381, 1189
BspPI GGATC 3 cut(s) 980, 1022, 1056
BsrFI RCCGGY 2 cut(s) 961, 1142
BsrI ACTGG 1 cut(s) 396
BssAI RCCGGY 2 cut(s) 961, 1142
BssECI CCNNGG 3 cut(s) 94, 383, 855
BssMI GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
BssT1I CCWWGG 1 cut(s) 855
Bst2UI CCWGG 1 cut(s) 385
Bst4CI ACNGT 1 cut(s) 1085
Bst6I CTCTTC 4 cut(s) 40, 498, 588, 1225
BstAPI GCANNNNNTGC 1 cut(s) 706
BstC8I GCNNGC 2 cut(s) 671, 707
BstDEI CTNAG 3 cut(s) 188, 968, 1175
BstF5I GGATG 8 cut(s) 69, 90, 265, 532, 571, 899, 1006, 1290
BstFNI CGCG 1 cut(s) 1019
BstH2I RGCGCY 1 cut(s) 758
BstHHI GCGC 2 cut(s) 757, 1125
BstKTI GATC 6 cut(s) 108, 864, 979, 988, 1017, 1051
BstMAI GTCTC 1 cut(s) 641
BstMBI GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
BstMWI GCNNNNNNNGC 4 cut(s) 220, 623, 637, 706
BstNI CCWGG 1 cut(s) 385
BstNSI RCATGY 2 cut(s) 709, 1297
BstPAI GACNNNNGTC 1 cut(s) 372
BstSCI CCNGG 1 cut(s) 383
BstUI CGCG 1 cut(s) 1019
BstV1I GCAGC 8 cut(s) 105, 327, 330, 744, 747, 1182, 1218, 1242
BstV2I GAAGAC 1 cut(s) 1088
BstX2I RGATCY 1 cut(s) 985
BstXI CCANNNNNNTGG 1 cut(s) 391
BstYI RGATCY 1 cut(s) 985
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 2 cut(s) 542, 786
BtgZI GCGATG 1 cut(s) 1125
BtsCI GGATG 8 cut(s) 69, 90, 265, 532, 571, 899, 1006, 1290
BtsI GCAGTG 1 cut(s) 694
BtsIMutI CAGTG 2 cut(s) 694, 1297
BtuMI TCGCGA 1 cut(s) 1019
Cac8I GCNNGC 2 cut(s) 671, 707
CfoI GCGC 2 cut(s) 757, 1125
Cfr10I RCCGGY 2 cut(s) 961, 1142
Cfr13I GGNCC 1 cut(s) 1188
CseI GACGC 1 cut(s) 882
Csp6I GTAC 2 cut(s) 332, 973
CspAI ACCGGT 2 cut(s) 961, 1142
CviAII CATG 5 cut(s) 242, 627, 706, 1278, 1294
CviQI GTAC 2 cut(s) 332, 973
DdeI CTNAG 3 cut(s) 188, 968, 1175
DpnI GATC 6 cut(s) 107, 863, 978, 987, 1016, 1050
DpnII GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
DrdI GACNNNNNNGTC 1 cut(s) 1147
DseDI GACNNNNNNGTC 1 cut(s) 1147
Eam1104I CTCTTC 4 cut(s) 40, 498, 588, 1225
EarI CTCTTC 4 cut(s) 40, 498, 588, 1225
Eco130I CCWWGG 1 cut(s) 855
Eco47I GGWCC 1 cut(s) 1188
Eco47III AGCGCT 1 cut(s) 756
Eco57I CTGAAG 1 cut(s) 294
EcoRII CCWGG 1 cut(s) 383
EcoT14I CCWWGG 1 cut(s) 855
ErhI CCWWGG 1 cut(s) 855
FaeI CATG 5 cut(s) 245, 630, 709, 1281, 1297
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 636, 668
FaqI GGGAC 1 cut(s) 860
FatI CATG 5 cut(s) 241, 626, 705, 1277, 1293
FblI GTMKAC 1 cut(s) 896
Fnu4HI GCNGC 8 cut(s) 119, 316, 319, 733, 736, 1171, 1232, 1256
FokI GGATG 8 cut(s) 76, 77, 272, 539, 578, 886, 1013, 1297
Fsp4HI GCNGC 8 cut(s) 119, 316, 319, 733, 736, 1171, 1232, 1256
FspBI CTAG 3 cut(s) 198, 510, 788
FspI TGCGCA 1 cut(s) 1124
GlaI GCGC 2 cut(s) 756, 1124
GluI GCNGC 8 cut(s) 119, 316, 319, 733, 736, 1171, 1232, 1256
GsaI CCCAGC 2 cut(s) 117, 584
HaeII RGCGCY 1 cut(s) 758
HaeIII GGCC 2 cut(s) 542, 786
HapII CCGG 4 cut(s) 77, 962, 989, 1143
HgaI GACGC 1 cut(s) 882
HhaI GCGC 2 cut(s) 757, 1125
Hin1II CATG 5 cut(s) 245, 630, 709, 1281, 1297
Hin6I GCGC 2 cut(s) 755, 1123
HinP1I GCGC 2 cut(s) 755, 1123
HincII GTYRAC 4 cut(s) 85, 424, 777, 897
HindII GTYRAC 4 cut(s) 85, 424, 777, 897
HindIII AAGCTT 1 cut(s) 796
HinfI GANTC 8 cut(s) 201, 305, 506, 649, 824, 1148, 1154, 1264
HpaI GTTAAC 1 cut(s) 777
HpaII CCGG 4 cut(s) 77, 962, 989, 1143
HphI GGTGA 5 cut(s) 100, 596, 647, 731, 1157
Hpy166II GTNNAC 5 cut(s) 85, 424, 777, 897, 1275
Hpy188I TCNGA 4 cut(s) 95, 191, 886, 1153
Hpy188III TCNNGA 8 cut(s) 8, 198, 309, 359, 377, 401, 461, 1018
Hpy8I GTNNAC 5 cut(s) 85, 424, 777, 897, 1275
Hpy99I CGWCG 1 cut(s) 898
HpyAV CCTTC 3 cut(s) 516, 710, 837
HpyCH4III ACNGT 1 cut(s) 1085
HpyCH4IV ACGT 1 cut(s) 396
HpyCH4V TGCA 6 cut(s) 173, 245, 288, 575, 1202, 1297
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 623, 637, 706
HpyF3I CTNAG 3 cut(s) 188, 968, 1175
HpySE526I ACGT 1 cut(s) 396
Hsp92II CATG 5 cut(s) 245, 630, 709, 1281, 1297
HspAI GCGC 2 cut(s) 755, 1123
KspAI GTTAAC 1 cut(s) 777
Kzo9I GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
LmnI GCTCC 2 cut(s) 126, 1228
Lsp1109I GCAGC 8 cut(s) 105, 327, 330, 744, 747, 1182, 1218, 1242
LweI GCATC 4 cut(s) 160, 556, 577, 880
MaeI CTAG 3 cut(s) 198, 510, 788
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 1 cut(s) 873
MalI GATC 6 cut(s) 107, 863, 978, 987, 1016, 1050
MboI GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
MflI RGATCY 1 cut(s) 985
MluCI AATT 2 cut(s) 12, 722
MlyI GAGTC 6 cut(s) 210, 515, 643, 818, 1157, 1273
MmeI TCCRAC 2 cut(s) 237, 992
MnlI CCTC 9 cut(s) 89, 169, 445, 532, 814, 963, 991, 1014, 1205
MseI TTAA 9 cut(s) 138, 153, 225, 621, 642, 654, 776, 908, 942
MslI CAYNNNNRTG 1 cut(s) 962
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 4 cut(s) 77, 962, 989, 1143
MspR9I CCNGG 1 cut(s) 385
MvaI CCWGG 1 cut(s) 385
MvnI CGCG 1 cut(s) 1019
MwoI GCNNNNNNNGC 4 cut(s) 220, 623, 637, 706
NdeII GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
NlaIII CATG 5 cut(s) 245, 630, 709, 1281, 1297
NlaIV GGNNCC 2 cut(s) 381, 1189
NmeAIII GCCGAG 1 cut(s) 676
NruI TCGCGA 1 cut(s) 1019
NsbI TGCGCA 1 cut(s) 1124
NspI RCATGY 2 cut(s) 709, 1297
PaeI GCATGC 1 cut(s) 709
PfeI GAWTC 2 cut(s) 305, 1154
PinAI ACCGGT 2 cut(s) 961, 1142
PkrI GCNGC 8 cut(s) 120, 317, 320, 734, 737, 1172, 1233, 1257
PleI GAGTC 6 cut(s) 209, 514, 643, 818, 1156, 1272
PpsI GAGTC 6 cut(s) 209, 514, 643, 818, 1156, 1272
PshAI GACNNNNGTC 1 cut(s) 372
Psp6I CCWGG 1 cut(s) 383
PspFI CCCAGC 2 cut(s) 113, 580
PspGI CCWGG 1 cut(s) 383
PspN4I GGNNCC 2 cut(s) 381, 1189
PspPI GGNCC 1 cut(s) 1188
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
PsuI RGATCY 1 cut(s) 985
RruI TCGCGA 1 cut(s) 1019
RsaI GTAC 2 cut(s) 333, 974
RsaNI GTAC 2 cut(s) 332, 973
RseI CAYNNNNRTG 1 cut(s) 962
SalI GTCGAC 1 cut(s) 895
SaqAI TTAA 9 cut(s) 138, 153, 225, 621, 642, 654, 776, 908, 942
SatI GCNGC 8 cut(s) 119, 316, 319, 733, 736, 1171, 1232, 1256
Sau3AI GATC 6 cut(s) 105, 861, 976, 985, 1014, 1048
Sau96I GGNCC 1 cut(s) 1188
SchI GAGTC 6 cut(s) 210, 515, 643, 818, 1157, 1273
ScrFI CCNGG 1 cut(s) 385
SfaNI GCATC 4 cut(s) 160, 556, 577, 880
SinI GGWCC 1 cut(s) 1188
SmiMI CAYNNNNRTG 1 cut(s) 962
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
SphI GCATGC 1 cut(s) 709
Sse9I AATT 2 cut(s) 12, 722
SsiI CCGC 4 cut(s) 111, 563, 617, 1270
SspMI CTAG 3 cut(s) 198, 510, 788
StyD4I CCNGG 1 cut(s) 383
StyI CCWWGG 1 cut(s) 855
TaaI ACNGT 1 cut(s) 1085
TaiI ACGT 1 cut(s) 399
TaqI TCGA 3 cut(s) 165, 896, 1262
TasI AATT 2 cut(s) 12, 722
TfiI GAWTC 2 cut(s) 305, 1154
Tru1I TTAA 9 cut(s) 138, 153, 225, 621, 642, 654, 776, 908, 942
Tru9I TTAA 9 cut(s) 138, 153, 225, 621, 642, 654, 776, 908, 942
TscAI CASTG 1 cut(s) 694
TseI GCWGC 8 cut(s) 118, 315, 318, 732, 735, 1170, 1231, 1255
TspDTI ATGAA 4 cut(s) 79, 543, 672, 759
TspRI CASTG 1 cut(s) 694
VpaK11BI GGWCC 1 cut(s) 1188
XapI RAATTY 1 cut(s) 722
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 2 cut(s) 709, 1297
XcmI CCANNNNNNNNNTGG 1 cut(s) 824
XmiI GTMKAC 1 cut(s) 896
XspI CTAG 3 cut(s) 198, 510, 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.