disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 100 | 5.9e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 171 - 345 | 5.3e-42 | NB-ARC domain |
| WHD_DRP | PF23559 | 428 - 493 | 1.4e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 573 - 862 | 5.2e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 685 - 807 | 2.4e-31 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 342 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 191, 2785 |
| AatII | GACGTC | 2 cut(s) | 195, 2930 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1655, 2378 |
| AccI | GTMKAC | 3 cut(s) | 183, 868, 1993 |
| AccII | CGCG | 1 cut(s) | 274 |
| AciI | CCGC | 2 cut(s) | 597, 2280 |
| AclI | AACGTT | 1 cut(s) | 1317 |
| AclWI | GGATC | 3 cut(s) | 1197, 1521, 2722 |
| AcoI | YGGCCR | 1 cut(s) | 2982 |
| AcsI | RAATTY | 7 cut(s) | 769, 873, 1522, 1574, 2091, 2248, 2960 |
| AcuI | CTGAAG | 5 cut(s) | 143, 285, 2162, 2777, 2984 |
| AcvI | CACGTG | 1 cut(s) | 2972 |
| AcyI | GRCGYC | 2 cut(s) | 192, 2927 |
| AfaI | GTAC | 5 cut(s) | 1388, 1627, 1852, 2453, 2659 |
| AflII | CTTAAG | 2 cut(s) | 1132, 2567 |
| AflIII | ACRYGT | 1 cut(s) | 931 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1000 |
| AjnI | CCWGG | 1 cut(s) | 297 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 417, 449, 1154, 1186 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2646, 2678, 2687, 2719 |
| Alw21I | GWGCWC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| Alw26I | GTCTC | 5 cut(s) | 1133, 2301, 2345, 2756, 2771 |
| Alw44I | GTGCAC | 3 cut(s) | 947, 1044, 2837 |
| AlwI | GGATC | 3 cut(s) | 1197, 1521, 2722 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2349 |
| Ama87I | CYCGRG | 1 cut(s) | 2746 |
| AoxI | GGCC | 4 cut(s) | 234, 717, 2679, 2982 |
| ApaLI | GTGCAC | 3 cut(s) | 947, 1044, 2837 |
| ApeKI | GCWGC | 5 cut(s) | 538, 938, 1109, 2524, 2782 |
| ApoI | RAATTY | 7 cut(s) | 769, 873, 1522, 1574, 2091, 2248, 2960 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1286, 1318 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2092, 2232 |
| AspS9I | GGNCC | 2 cut(s) | 718, 2679 |
| AsuC2I | CCSGG | 3 cut(s) | 1041, 2747, 2748 |
| AsuHPI | GGTGA | 5 cut(s) | 139, 1391, 2195, 2266, 2555 |
| AvaI | CYCGRG | 1 cut(s) | 2746 |
| BaeGI | GKGCMC | 3 cut(s) | 951, 1048, 2841 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 252, 285 |
| BalI | TGGCCA | 1 cut(s) | 2984 |
| BanII | GRGCYC | 2 cut(s) | 216, 2406 |
| BauI | CACGAG | 1 cut(s) | 110 |
| BbrPI | CACGTG | 1 cut(s) | 2972 |
| BbsI | GAAGAC | 5 cut(s) | 100, 393, 999, 1202, 2846 |
| Bbv12I | GWGCWC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| BbvCI | CCTCAGC | 1 cut(s) | 2063 |
| BbvI | GCAGC | 5 cut(s) | 525, 950, 1096, 2536, 2769 |
| BccI | CCATC | 5 cut(s) | 500, 950, 2273, 2732, 2974 |
| BceAI | ACGGC | 4 cut(s) | 1111, 1836, 2034, 2770 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 25, 59 |
| BciT130I | CCWGG | 1 cut(s) | 299 |
| BciVI | GTATCC | 1 cut(s) | 1739 |
| BcnI | CCSGG | 3 cut(s) | 1041, 2747, 2748 |
| BcoDI | GTCTC | 5 cut(s) | 1133, 2301, 2345, 2756, 2771 |
| BfaI | CTAG | 8 cut(s) | 1106, 1121, 1145, 1694, 1838, 2529, 2765, 3014 |
| BfmI | CTRYAG | 3 cut(s) | 573, 582, 1911 |
| BfrI | CTTAAG | 2 cut(s) | 1132, 2567 |
| BfuI | GTATCC | 1 cut(s) | 1739 |
| BglII | AGATCT | 2 cut(s) | 529, 2155 |
| BisI | GCNGC | 5 cut(s) | 539, 939, 1110, 2525, 2783 |
| BlsI | GCNGC | 5 cut(s) | 540, 940, 1111, 2526, 2784 |
| Bme1390I | CCNGG | 4 cut(s) | 299, 1041, 2747, 2748 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1000 |
| BmeT110I | CYCGRG | 1 cut(s) | 2746 |
| BmgT120I | GGNCC | 2 cut(s) | 718, 2679 |
| BmrFI | CCNGG | 4 cut(s) | 299, 1041, 2747, 2748 |
| BmrI | ACTGGG | 2 cut(s) | 868, 2052 |
| BmsI | GCATC | 6 cut(s) | 151, 1253, 1965, 2122, 2325, 2732 |
| BmuI | ACTGGG | 2 cut(s) | 868, 2052 |
| BpiI | GAAGAC | 5 cut(s) | 100, 393, 999, 1202, 2846 |
| BpmI | CTGGAG | 3 cut(s) | 84, 1512, 2510 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2063 |
| BpuMI | CCSGG | 3 cut(s) | 1041, 2747, 2748 |
| Bsa29I | ATCGAT | 1 cut(s) | 258 |
| BsaAI | YACGTR | 3 cut(s) | 885, 2410, 2972 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1179 |
| BsaHI | GRCGYC | 2 cut(s) | 192, 2927 |
| BsaI | GGTCTC | 2 cut(s) | 1133, 2756 |
| BsaJI | CCNNGG | 5 cut(s) | 237, 297, 1039, 2080, 2746 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 429, 459 |
| Bse1I | ACTGG | 6 cut(s) | 863, 1014, 1637, 2047, 2375, 2682 |
| Bse3DI | GCAATG | 3 cut(s) | 448, 2052, 2366 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1179 |
| BseBI | CCWGG | 1 cut(s) | 299 |
| BseCI | ATCGAT | 1 cut(s) | 258 |
| BseDI | CCNNGG | 5 cut(s) | 237, 297, 1039, 2080, 2746 |
| BseGI | GGATG | 9 cut(s) | 204, 256, 511, 835, 994, 1048, 2424, 2660, 2747 |
| BseJI | GATNNNNATC | 1 cut(s) | 1179 |
| BseMI | GCAATG | 3 cut(s) | 448, 2052, 2366 |
| BseMII | CTCAG | 6 cut(s) | 791, 2054, 2356, 2591, 2824, 3026 |
| BseNI | ACTGG | 6 cut(s) | 863, 1014, 1637, 2047, 2375, 2682 |
| BseRI | GAGGAG | 2 cut(s) | 182, 1385 |
| BseSI | GKGCMC | 3 cut(s) | 951, 1048, 2841 |
| BseXI | GCAGC | 5 cut(s) | 525, 950, 1096, 2536, 2769 |
| Bsh1236I | CGCG | 1 cut(s) | 274 |
| Bsh1285I | CGRYCG | 1 cut(s) | 187 |
| BshFI | GGCC | 4 cut(s) | 236, 719, 2681, 2984 |
| BshVI | ATCGAT | 1 cut(s) | 258 |
| BsiEI | CGRYCG | 1 cut(s) | 187 |
| BsiHKAI | GWGCWC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2746 |
| BsiSI | CCGG | 4 cut(s) | 30, 1041, 1247, 2747 |
| BslFI | GGGAC | 2 cut(s) | 494, 563 |
| BsmAI | GTCTC | 5 cut(s) | 1133, 2301, 2345, 2756, 2771 |
| BsmBI | CGTCTC | 2 cut(s) | 2345, 2771 |
| BsmFI | GGGAC | 2 cut(s) | 494, 563 |
| BsnI | GGCC | 4 cut(s) | 236, 719, 2681, 2984 |
| Bso31I | GGTCTC | 2 cut(s) | 1133, 2756 |
| BsoBI | CYCGRG | 1 cut(s) | 2746 |
| Bsp1286I | GDGCHC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| BspACI | CCGC | 2 cut(s) | 597, 2280 |
| BspANI | GGCC | 4 cut(s) | 236, 719, 2681, 2984 |
| BspCNI | CTCAG | 6 cut(s) | 792, 2055, 2355, 2592, 2823, 3027 |
| BspDI | ATCGAT | 1 cut(s) | 258 |
| BspFNI | CGCG | 1 cut(s) | 274 |
| BspHI | TCATGA | 1 cut(s) | 3041 |
| BspMAI | CTGCAG | 1 cut(s) | 1915 |
| BspPI | GGATC | 3 cut(s) | 1197, 1521, 2722 |
| BspTI | CTTAAG | 2 cut(s) | 1132, 2567 |
| BspTNI | GGTCTC | 2 cut(s) | 1133, 2756 |
| BsrDI | GCAATG | 3 cut(s) | 448, 2052, 2366 |
| BsrI | ACTGG | 6 cut(s) | 863, 1014, 1637, 2047, 2375, 2682 |
| BssECI | CCNNGG | 5 cut(s) | 237, 297, 1039, 2080, 2746 |
| BssNI | GRCGYC | 2 cut(s) | 192, 2927 |
| BssSI | CACGAG | 1 cut(s) | 110 |
| BssT1I | CCWWGG | 1 cut(s) | 2080 |
| Bst2BI | CACGAG | 1 cut(s) | 110 |
| Bst2UI | CCWGG | 1 cut(s) | 299 |
| BstACI | GRCGYC | 2 cut(s) | 192, 2927 |
| BstAFI | CTTAAG | 2 cut(s) | 1132, 2567 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2836 |
| BstBAI | YACGTR | 3 cut(s) | 885, 2410, 2972 |
| BstC8I | GCNNGC | 3 cut(s) | 1100, 1710, 1911 |
| BstDEI | CTNAG | 9 cut(s) | 419, 788, 800, 2063, 2342, 2600, 2729, 2810, 3035 |
| BstEII | GGTNACC | 1 cut(s) | 1781 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 499, 725 |
| BstF5I | GGATG | 9 cut(s) | 204, 256, 511, 835, 994, 1048, 2424, 2660, 2747 |
| BstFNI | CGCG | 1 cut(s) | 274 |
| BstMAI | GTCTC | 5 cut(s) | 1133, 2301, 2345, 2756, 2771 |
| BstMCI | CGRYCG | 1 cut(s) | 187 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 211, 2132, 2788, 2836, 2920 |
| BstNI | CCWGG | 1 cut(s) | 299 |
| BstNSI | RCATGY | 5 cut(s) | 224, 935, 1022, 1086, 1792 |
| BstPI | GGTNACC | 1 cut(s) | 1781 |
| BstSCI | CCNGG | 4 cut(s) | 297, 1039, 2745, 2746 |
| BstSFI | CTRYAG | 3 cut(s) | 573, 582, 1911 |
| BstSLI | GKGCMC | 3 cut(s) | 951, 1048, 2841 |
| BstSNI | TACGTA | 1 cut(s) | 2410 |
| BstUI | CGCG | 1 cut(s) | 274 |
| BstV1I | GCAGC | 5 cut(s) | 525, 950, 1096, 2536, 2769 |
| BstV2I | GAAGAC | 5 cut(s) | 100, 393, 999, 1202, 2846 |
| BstX2I | RGATCY | 4 cut(s) | 529, 1189, 2155, 2714 |
| BstYI | RGATCY | 4 cut(s) | 529, 1189, 2155, 2714 |
| Bsu15I | ATCGAT | 1 cut(s) | 258 |
| BsuI | GTATCC | 1 cut(s) | 1739 |
| BsuRI | GGCC | 4 cut(s) | 236, 719, 2681, 2984 |
| BsuTUI | ATCGAT | 1 cut(s) | 258 |
| BtsCI | GGATG | 9 cut(s) | 204, 256, 511, 835, 994, 1048, 2424, 2660, 2747 |
| BtsI | GCAGTG | 1 cut(s) | 156 |
| BtsIMutI | CAGTG | 4 cut(s) | 156, 1644, 1851, 2012 |
| Cac8I | GCNNGC | 3 cut(s) | 1100, 1710, 1911 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2349 |
| CciI | TCATGA | 1 cut(s) | 3041 |
| Cfr13I | GGNCC | 2 cut(s) | 718, 2679 |
| Cfr9I | CCCGGG | 1 cut(s) | 2746 |
| ClaI | ATCGAT | 1 cut(s) | 258 |
| CseI | GACGC | 6 cut(s) | 263, 854, 1928, 2327, 2788, 2999 |
| Csp6I | GTAC | 5 cut(s) | 1387, 1626, 1851, 2452, 2658 |
| CviQI | GTAC | 5 cut(s) | 1387, 1626, 1851, 2452, 2658 |
| DdeI | CTNAG | 9 cut(s) | 419, 788, 800, 2063, 2342, 2600, 2729, 2810, 3035 |
| DraI | TTTAAA | 1 cut(s) | 975 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 191, 2785 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1000 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 191, 2785 |
| EaeI | YGGCCR | 1 cut(s) | 2982 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1000 |
| EciI | GGCGGA | 1 cut(s) | 2295 |
| Ecl136II | GAGCTC | 2 cut(s) | 214, 2404 |
| Eco105I | TACGTA | 1 cut(s) | 2410 |
| Eco130I | CCWWGG | 1 cut(s) | 2080 |
| Eco24I | GRGCYC | 2 cut(s) | 216, 2406 |
| Eco31I | GGTCTC | 2 cut(s) | 1133, 2756 |
| Eco32I | GATATC | 1 cut(s) | 409 |
| Eco53kI | GAGCTC | 2 cut(s) | 214, 2404 |
| Eco57I | CTGAAG | 5 cut(s) | 143, 285, 2162, 2777, 2984 |
| Eco72I | CACGTG | 1 cut(s) | 2972 |
| Eco88I | CYCGRG | 1 cut(s) | 2746 |
| Eco91I | GGTNACC | 1 cut(s) | 1781 |
| EcoICRI | GAGCTC | 2 cut(s) | 214, 2404 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 499, 725 |
| EcoO109I | RGGNCCY | 1 cut(s) | 718 |
| EcoO65I | GGTNACC | 1 cut(s) | 1781 |
| EcoRI | GAATTC | 2 cut(s) | 769, 2960 |
| EcoRII | CCWGG | 1 cut(s) | 297 |
| EcoRV | GATATC | 1 cut(s) | 409 |
| EcoT14I | CCWWGG | 1 cut(s) | 2080 |
| EcoT22I | ATGCAT | 3 cut(s) | 1024, 1458, 1794 |
| EcoT38I | GRGCYC | 2 cut(s) | 216, 2406 |
| ErhI | CCWWGG | 1 cut(s) | 2080 |
| Esp3I | CGTCTC | 2 cut(s) | 2345, 2771 |
| FaqI | GGGAC | 2 cut(s) | 494, 563 |
| FauI | CCCGC | 1 cut(s) | 590 |
| FauNDI | CATATG | 2 cut(s) | 1654, 1986 |
| FblI | GTMKAC | 3 cut(s) | 183, 868, 1993 |
| Fnu4HI | GCNGC | 5 cut(s) | 539, 939, 1110, 2525, 2783 |
| FokI | GGATG | 9 cut(s) | 211, 263, 518, 842, 1001, 1035, 2431, 2667, 2754 |
| FriOI | GRGCYC | 2 cut(s) | 216, 2406 |
| Fsp4HI | GCNGC | 5 cut(s) | 539, 939, 1110, 2525, 2783 |
| FspBI | CTAG | 8 cut(s) | 1106, 1121, 1145, 1694, 1838, 2529, 2765, 3014 |
| GluI | GCNGC | 5 cut(s) | 539, 939, 1110, 2525, 2783 |
| GsuI | CTGGAG | 3 cut(s) | 84, 1512, 2510 |
| HaeIII | GGCC | 4 cut(s) | 236, 719, 2681, 2984 |
| HapII | CCGG | 4 cut(s) | 30, 1041, 1247, 2747 |
| HgaI | GACGC | 6 cut(s) | 263, 854, 1928, 2327, 2788, 2999 |
| Hin1I | GRCGYC | 2 cut(s) | 192, 2927 |
| HincII | GTYRAC | 2 cut(s) | 184, 2772 |
| HindII | GTYRAC | 2 cut(s) | 184, 2772 |
| HpaII | CCGG | 4 cut(s) | 30, 1041, 1247, 2747 |
| HphI | GGTGA | 5 cut(s) | 139, 1391, 2195, 2266, 2555 |
| Hpy99I | CGWCG | 2 cut(s) | 197, 2791 |
| HpyCH4IV | ACGT | 7 cut(s) | 192, 884, 1317, 1408, 2409, 2927, 2971 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 211, 2132, 2788, 2836, 2920 |
| HpyF3I | CTNAG | 9 cut(s) | 419, 788, 800, 2063, 2342, 2600, 2729, 2810, 3035 |
| HpySE526I | ACGT | 7 cut(s) | 192, 884, 1317, 1408, 2409, 2927, 2971 |
| Hsp92I | GRCGYC | 2 cut(s) | 192, 2927 |
| LmnI | GCTCC | 2 cut(s) | 862, 924 |
| Lsp1109I | GCAGC | 5 cut(s) | 525, 950, 1096, 2536, 2769 |
| LweI | GCATC | 6 cut(s) | 151, 1253, 1965, 2122, 2325, 2732 |
| MaeI | CTAG | 8 cut(s) | 1106, 1121, 1145, 1694, 1838, 2529, 2765, 3014 |
| MaeII | ACGT | 7 cut(s) | 192, 884, 1317, 1408, 2409, 2927, 2971 |
| MfeI | CAATTG | 1 cut(s) | 2587 |
| MflI | RGATCY | 4 cut(s) | 529, 1189, 2155, 2714 |
| MhlI | GDGCHC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| MlsI | TGGCCA | 1 cut(s) | 2984 |
| MluNI | TGGCCA | 1 cut(s) | 2984 |
| MlyI | GAGTC | 3 cut(s) | 90, 2303, 2806 |
| MmeI | TCCRAC | 6 cut(s) | 363, 415, 966, 1491, 1651, 2346 |
| Mox20I | TGGCCA | 1 cut(s) | 2984 |
| Mph1103I | ATGCAT | 3 cut(s) | 1024, 1458, 1794 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2092, 2232 |
| MscI | TGGCCA | 1 cut(s) | 2984 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1087, 1717 |
| Msp20I | TGGCCA | 1 cut(s) | 2984 |
| MspCI | CTTAAG | 2 cut(s) | 1132, 2567 |
| MspI | CCGG | 4 cut(s) | 30, 1041, 1247, 2747 |
| MspR9I | CCNGG | 4 cut(s) | 299, 1041, 2747, 2748 |
| MunI | CAATTG | 1 cut(s) | 2587 |
| MvaI | CCWGG | 1 cut(s) | 299 |
| MvnI | CGCG | 1 cut(s) | 274 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 211, 2132, 2788, 2836, 2920 |
| NciI | CCSGG | 3 cut(s) | 1041, 2747, 2748 |
| NdeI | CATATG | 2 cut(s) | 1654, 1986 |
| NmeAIII | GCCGAG | 1 cut(s) | 262 |
| NmuCI | GTSAC | 4 cut(s) | 188, 275, 752, 2928 |
| NsiI | ATGCAT | 3 cut(s) | 1024, 1458, 1794 |
| NspI | RCATGY | 5 cut(s) | 224, 935, 1022, 1086, 1792 |
| PagI | TCATGA | 1 cut(s) | 3041 |
| PciI | ACATGT | 1 cut(s) | 931 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 189 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2092, 2232 |
| PfeI | GAWTC | 7 cut(s) | 1162, 1772, 1930, 2104, 2201, 2702, 3029 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1655, 2378 |
| PkrI | GCNGC | 5 cut(s) | 540, 940, 1111, 2526, 2784 |
| PleI | GAGTC | 3 cut(s) | 90, 2303, 2805 |
| PmaCI | CACGTG | 1 cut(s) | 2972 |
| PmlI | CACGTG | 1 cut(s) | 2972 |
| PpsI | GAGTC | 3 cut(s) | 90, 2303, 2805 |
| Ppu21I | YACGTR | 3 cut(s) | 885, 2410, 2972 |
| PscI | ACATGT | 1 cut(s) | 931 |
| PsiI | TTATAA | 1 cut(s) | 342 |
| Psp124BI | GAGCTC | 2 cut(s) | 216, 2406 |
| Psp1406I | AACGTT | 1 cut(s) | 1317 |
| Psp6I | CCWGG | 1 cut(s) | 297 |
| PspCI | CACGTG | 1 cut(s) | 2972 |
| PspEI | GGTNACC | 1 cut(s) | 1781 |
| PspGI | CCWGG | 1 cut(s) | 297 |
| PspPI | GGNCC | 2 cut(s) | 718, 2679 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2347, 2379 |
| PstI | CTGCAG | 1 cut(s) | 1915 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2349 |
| PsuI | RGATCY | 4 cut(s) | 529, 1189, 2155, 2714 |
| RsaI | GTAC | 5 cut(s) | 1388, 1627, 1852, 2453, 2659 |
| RsaNI | GTAC | 5 cut(s) | 1387, 1626, 1851, 2452, 2658 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1087, 1717 |
| SacI | GAGCTC | 2 cut(s) | 216, 2406 |
| SalI | GTCGAC | 1 cut(s) | 182 |
| SatI | GCNGC | 5 cut(s) | 539, 939, 1110, 2525, 2783 |
| Sau96I | GGNCC | 2 cut(s) | 718, 2679 |
| SchI | GAGTC | 3 cut(s) | 90, 2303, 2806 |
| ScrFI | CCNGG | 4 cut(s) | 299, 1041, 2747, 2748 |
| SduI | GDGCHC | 7 cut(s) | 156, 216, 951, 1048, 2226, 2406, 2841 |
| SfaNI | GCATC | 6 cut(s) | 151, 1253, 1965, 2122, 2325, 2732 |
| SfcI | CTRYAG | 3 cut(s) | 573, 582, 1911 |
| SmaI | CCCGGG | 1 cut(s) | 2748 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1087, 1717 |
| SmlI | CTYRAG | 2 cut(s) | 1132, 2567 |
| SmoI | CTYRAG | 2 cut(s) | 1132, 2567 |
| SnaBI | TACGTA | 1 cut(s) | 2410 |
| SsiI | CCGC | 2 cut(s) | 597, 2280 |
| SspI | AATATT | 1 cut(s) | 1593 |
| SspMI | CTAG | 8 cut(s) | 1106, 1121, 1145, 1694, 1838, 2529, 2765, 3014 |
| SstI | GAGCTC | 2 cut(s) | 216, 2406 |
| StyD4I | CCNGG | 4 cut(s) | 297, 1039, 2745, 2746 |
| StyI | CCWWGG | 1 cut(s) | 2080 |
| TaiI | ACGT | 7 cut(s) | 195, 887, 1320, 1411, 2412, 2930, 2974 |
| TaqI | TCGA | 6 cut(s) | 35, 99, 183, 231, 258, 2226 |
| TatI | WGTACW | 1 cut(s) | 1850 |
| TfiI | GAWTC | 7 cut(s) | 1162, 1772, 1930, 2104, 2201, 2702, 3029 |
| TscAI | CASTG | 4 cut(s) | 156, 1644, 1851, 2019 |
| TseFI | GTSAC | 4 cut(s) | 188, 275, 752, 2928 |
| TseI | GCWGC | 5 cut(s) | 538, 938, 1109, 2524, 2782 |
| Tsp45I | GTSAC | 4 cut(s) | 188, 275, 752, 2928 |
| TspGWI | ACGGA | 5 cut(s) | 404, 498, 2194, 2714, 2789 |
| TspMI | CCCGGG | 1 cut(s) | 2746 |
| TspRI | CASTG | 4 cut(s) | 156, 1644, 1851, 2019 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1655, 2378 |
| Vha464I | CTTAAG | 2 cut(s) | 1132, 2567 |
| VneI | GTGCAC | 3 cut(s) | 947, 1044, 2837 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 499, 725 |
| XapI | RAATTY | 7 cut(s) | 769, 873, 1522, 1574, 2091, 2248, 2960 |
| XbaI | TCTAGA | 2 cut(s) | 1693, 3013 |
| XceI | RCATGY | 5 cut(s) | 224, 935, 1022, 1086, 1792 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1659 |
| XmaI | CCCGGG | 1 cut(s) | 2746 |
| XmiI | GTMKAC | 3 cut(s) | 183, 868, 1993 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2092, 2232 |
| XspI | CTAG | 8 cut(s) | 1106, 1121, 1145, 1694, 1838, 2529, 2765, 3014 |
| ZraI | GACGTC | 2 cut(s) | 193, 2928 |
| Zsp2I | ATGCAT | 3 cut(s) | 1024, 1458, 1794 |