FvH4_6g39860

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
31487964 .. 31490447
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39860.t1

Sequence Viewer

Length: 1983 bp
ATGATCCTTGAATGCAGGAGGATCTCTGATCATTTCGTTTTACCAGTCTTCTACGATGTTGACCCATCTCATGTGAGGAAGCAGACAGAAAGTCTTGCACAAGCATTTGCTATACATCAAGAAAATCAATCCTTCGACAAGGTAAAAGGATGGAGGGCAGCACTTACAGAAGTTGCTGATCTAGCAGGGATGGTCTTGGATAATGAAGCTCATGGGCATGAATCAAAGTTCATCCAAGATGTTGTTAATGTGATTGGAGACAATCTAGGCGGTGTCCCCTTAAGCCCTGCAAATCAAAAGAAAATCATGGCTTTAAAGATTATGGCTTCTTGGGAGGTCAAAGACTTGACAGATAGATCACTGGACACACTGCAGATGAAGCTGTTGTCTGCTAAGGCTTGTCTCGATGATGCCGAGGGGAAGCTACTGACTAAGCCAACTGTGAAGGAGTGTGTTGATGAGCTTAGAGACGCCATTTATAATGCTGAGGACCTGTTGGACGAGATCAAAACTGAAGCACTAAGGCGCGAGTTGGAAGGCGAATATGCAAGAAGTTTCACAGATAAGGTACAAGAGCTGAATTCTAGTCCATTTCATGCCTTTGACACAACATTAATATACTCCAGGATTAAGGAAGTTCATGGGAGACTAAACTCTATTACCCAACAGATAGATGTCATGGGTTTGAAAACAGGTGTTGGAAGCAGTACAGTATATCAAACTGTACCTTCAACTTCGTTGGTAGAAGACTCTGTGTATGGAAGAGATGAGAAGAAGGAGACGGTAGTTAAACTATTGCTACACAGTTGGCCAGATAAACAATTAAGTGACTACTGCTGTGTGATTTACCCAAGGCGGAAGACACGATTACTACACGATGATGAGAGTGGCAATAAGATGAGTGTGATTCCTATTGTGGGCATGGGAGGGATTGGGAAAACCACATTTGCTCAGCTCATATTCAATGATGGGAGAGTGAGACAACAATATGATCTCTTTGCATGGATTTGTGTTTCAGAGAATTTTGATGTGCTTAGAATAACACAAATTATTGATGAGCAAATCAATTCAACAACTTGTGATGTCAGGAACCTAGATCTGCTTCAGGCAAAAGTGAAGATGACCTTAACAGGAAAGAAATTTTTCTTTGTTCTGGATGATGTCTGGAACGATAATTATCTCCATTGGGATTCTTTAAGGCGTCCATTTGAGTCTGGAGCACATGGAAGTATGATCTTTGTCACAACACGCAGTGAAGGTGTCGCATCCATGATGGGTACATTTCAAGCTTTCCATCTAAAGCAAATATCTGATAAACATTCCTGGTTATTGTTTGAAAAACATGCCTTCAATAGGAAAGGTGTTCCCGCACTCTCAAATCTCGAAGAAATAGGAAGACAAGTTGCTAGGAAGTGTCAAGGTCTTCCTTTGGCTATTAAAGCACTTGGGGGTCTCTTACGTTCTTACAGAAGTGAGGAGGAATGGAAAAGTATTTTAAATAGTGATATATGGGAGGTTGAAAGGAATGTTATGCCAGCATTGCTGTTGAGCTACCGCTATTTGCCTCAATATCTGAAACGTTGCTTTGCCTATTGTTCGATGTTTCCCAGAGGTTATATATTTGAAAGAGCTGAACTGATTTCCTTATGGAAGGCTGAAGACCTCATTCCATCCACCAACAAGAAAAGCATGGAAGAAGTTGGAGTAGAGTACTTCAACGATCTAGTCTCAAAGTCGTTTTTCCAACCATATCAGTTACGAGCGACAGACAACAAAGCATATCATATAATGCATGACCTAATCAATGCTTTAGCAAAATTCATTTCTGGAGAATTTTGTGTCAGGTGGGAAGACAGCGACTCCTCCACCGTTGCGGCCAAGACTCGTCATTTTTCATATATGAAAAGATATGCTCAAAGCAATGCAATGAGAAATTTGAGGCCTTATGTGAAGCTATATCTTTGCGCACCTTCCTACCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

661

Amino Acids

75.59

Weight (kDa)

6.8

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 2 - 100 4.2e-14 TIR domain
Rx_N PF18052 119 - 179 1.3e-13 Rx N-terminal domain
NB-ARC PF00931 290 - 453 1.7e-34 NB-ARC domain
WHD_DRP PF23559 534 - 605 2.1e-21 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 480
Acc16I TGCGCA 1 cut(s) 1966
AccII CGCG 1 cut(s) 528
AciI CCGC 5 cut(s) 270, 856, 1368, 1555, 1874
AclI AACGTT 1 cut(s) 1579
AclWI GGATC 1 cut(s) 29
AcoI YGGCCR 2 cut(s) 809, 1875
AcsI RAATTY 6 cut(s) 580, 1021, 1139, 1817, 1832, 1933
AcuI CTGAAG 3 cut(s) 534, 1088, 1677
AcyI GRCGYC 2 cut(s) 471, 1201
AdeI CACNNNGTG 1 cut(s) 1253
AfaI GTAC 5 cut(s) 570, 709, 726, 1279, 1712
AfiI CCNNNNNNNGG 2 cut(s) 917, 1353
AflII CTTAAG 1 cut(s) 280
AhdI GACNNNNNGTC 1 cut(s) 90
AjnI CCWGG 2 cut(s) 623, 1322
Alw21I GWGCWC 1 cut(s) 1222
Alw26I GTCTC 8 cut(s) 252, 407, 462, 640, 773, 973, 1457, 1732
AlwI GGATC 1 cut(s) 29
AoxI GGCC 3 cut(s) 809, 1875, 1940
ApeKI GCWGC 1 cut(s) 158
ApoI RAATTY 6 cut(s) 580, 1021, 1139, 1817, 1832, 1933
AseI ATTAAT 1 cut(s) 614
Asp700I GAANNNNTTC 1 cut(s) 1142
AspLEI GCGC 2 cut(s) 528, 1967
AspS9I GGNCC 1 cut(s) 490
AvaII GGWCC 1 cut(s) 490
BalI TGGCCA 1 cut(s) 811
BbsI GAAGAC 7 cut(s) 40, 753, 866, 1402, 1415, 1665, 1857
Bbv12I GWGCWC 1 cut(s) 1222
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 1 cut(s) 170
BccI CCATC 7 cut(s) 73, 144, 184, 962, 1267, 1302, 1678
BciT130I CCWGG 2 cut(s) 625, 1324
BclI TGATCA 1 cut(s) 28
BcoDI GTCTC 8 cut(s) 252, 407, 462, 640, 773, 973, 1457, 1732
BfaI CTAG 6 cut(s) 182, 266, 585, 1094, 1407, 1724
BfmI CTRYAG 1 cut(s) 371
BfrI CTTAAG 1 cut(s) 280
BglII AGATCT 1 cut(s) 1096
BisI GCNGC 2 cut(s) 159, 1875
BlpI GCTNAGC 1 cut(s) 951
BlsI GCNGC 2 cut(s) 160, 1876
BmcAI AGTACT 1 cut(s) 1712
Bme1390I CCNGG 2 cut(s) 625, 1324
Bme18I GGWCC 1 cut(s) 490
BmeRI GACNNNNNGTC 1 cut(s) 90
BmgT120I GGNCC 1 cut(s) 490
BmiI GGNNCC 1 cut(s) 1091
BmrFI CCNGG 2 cut(s) 625, 1324
BmsI GCATC 2 cut(s) 400, 1274
BpiI GAAGAC 7 cut(s) 40, 753, 866, 1402, 1415, 1665, 1857
BpmI CTGGAG 3 cut(s) 607, 1236, 1848
Bpu10I CCTNAGC 2 cut(s) 393, 486
Bpu1102I GCTNAGC 1 cut(s) 951
BsaBI GATNNNNATC 1 cut(s) 1176
BsaHI GRCGYC 2 cut(s) 471, 1201
BsaI GGTCTC 1 cut(s) 1457
BsaJI CCNNGG 2 cut(s) 414, 851
BsaXI ACNNNNNCTCC 2 cut(s) 1844, 1874
Bsc4I CCNNNNNNNGG 2 cut(s) 917, 1353
Bse1I ACTGG 2 cut(s) 44, 366
Bse3DI GCAATG 3 cut(s) 1538, 1927, 1932
Bse8I GATNNNNATC 1 cut(s) 1176
BseBI CCWGG 2 cut(s) 625, 1324
BseDI CCNNGG 2 cut(s) 414, 851
BseGI GGATG 6 cut(s) 155, 195, 231, 1162, 1265, 1670
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 2 cut(s) 917, 1353
BseMI GCAATG 3 cut(s) 1538, 1927, 1932
BseMII CTCAG 2 cut(s) 477, 965
BseNI ACTGG 2 cut(s) 44, 366
BseRI GAGGAG 2 cut(s) 1490, 1852
BseXI GCAGC 1 cut(s) 170
Bsh1236I CGCG 1 cut(s) 528
BshFI GGCC 3 cut(s) 811, 1877, 1942
BsiHKAI GWGCWC 1 cut(s) 1222
BslFI GGGAC 1 cut(s) 260
BslI CCNNNNNNNGG 2 cut(s) 917, 1353
BsmAI GTCTC 8 cut(s) 252, 407, 462, 640, 773, 973, 1457, 1732
BsmBI CGTCTC 2 cut(s) 462, 773
BsmFI GGGAC 1 cut(s) 260
BsmI GAATGC 1 cut(s) 17
BsnI GGCC 3 cut(s) 811, 1877, 1942
Bso31I GGTCTC 1 cut(s) 1457
Bsp1286I GDGCHC 1 cut(s) 1222
Bsp1720I GCTNAGC 1 cut(s) 951
BspACI CCGC 5 cut(s) 270, 856, 1368, 1555, 1874
BspANI GGCC 3 cut(s) 811, 1877, 1942
BspCNI CTCAG 2 cut(s) 478, 964
BspFNI CGCG 1 cut(s) 528
BspLI GGNNCC 1 cut(s) 1091
BspMAI CTGCAG 1 cut(s) 375
BspPI GGATC 1 cut(s) 29
BspTI CTTAAG 1 cut(s) 280
BspTNI GGTCTC 1 cut(s) 1457
BsrDI GCAATG 3 cut(s) 1538, 1927, 1932
BsrI ACTGG 2 cut(s) 44, 366
BssECI CCNNGG 2 cut(s) 414, 851
BssNI GRCGYC 2 cut(s) 471, 1201
BssT1I CCWWGG 1 cut(s) 851
Bst2UI CCWGG 2 cut(s) 625, 1324
Bst4CI ACNGT 7 cut(s) 442, 712, 724, 784, 806, 1870, 1979
Bst6I CTCTTC 1 cut(s) 757
BstACI GRCGYC 2 cut(s) 471, 1201
BstAFI CTTAAG 1 cut(s) 280
BstC8I GCNNGC 1 cut(s) 1536
BstDEI CTNAG 7 cut(s) 393, 432, 464, 486, 521, 951, 1034
BstENI CCTNNNNNAGG 1 cut(s) 1351
BstF5I GGATG 6 cut(s) 155, 195, 231, 1162, 1265, 1670
BstFNI CGCG 1 cut(s) 528
BstHHI GCGC 2 cut(s) 528, 1967
BstMAI GTCTC 8 cut(s) 252, 407, 462, 640, 773, 973, 1457, 1732
BstMWI GCNNNNNNNGC 4 cut(s) 182, 379, 1439, 1540
BstNI CCWGG 2 cut(s) 625, 1324
BstNSI RCATGY 1 cut(s) 1346
BstSCI CCNGG 2 cut(s) 623, 1322
BstSFI CTRYAG 1 cut(s) 371
BstUI CGCG 1 cut(s) 528
BstV1I GCAGC 1 cut(s) 170
BstV2I GAAGAC 7 cut(s) 40, 753, 866, 1402, 1415, 1665, 1857
BstX2I RGATCY 2 cut(s) 21, 1096
BstYI RGATCY 2 cut(s) 21, 1096
BsuRI GGCC 3 cut(s) 811, 1877, 1942
BtsCI GGATG 6 cut(s) 155, 195, 231, 1162, 1265, 1670
BtsI GCAGTG 2 cut(s) 368, 1258
BtsIMutI CAGTG 3 cut(s) 359, 368, 1258
Cac8I GCNNGC 1 cut(s) 1536
CfoI GCGC 2 cut(s) 528, 1967
Cfr13I GGNCC 1 cut(s) 490
CseI GACGC 2 cut(s) 479, 1190
Csp6I GTAC 5 cut(s) 569, 708, 725, 1278, 1711
CviQI GTAC 5 cut(s) 569, 708, 725, 1278, 1711
DdeI CTNAG 7 cut(s) 393, 432, 464, 486, 521, 951, 1034
DraI TTTAAA 2 cut(s) 315, 1497
DraIII CACNNNGTG 1 cut(s) 1253
DriI GACNNNNNGTC 1 cut(s) 90
EaeI YGGCCR 2 cut(s) 809, 1875
Eam1104I CTCTTC 1 cut(s) 757
Eam1105I GACNNNNNGTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 757
EciI GGCGGA 1 cut(s) 871
Eco130I CCWWGG 1 cut(s) 851
Eco147I AGGCCT 1 cut(s) 1942
Eco31I GGTCTC 1 cut(s) 1457
Eco47I GGWCC 1 cut(s) 490
Eco57I CTGAAG 3 cut(s) 534, 1088, 1677
EcoNI CCTNNNNNAGG 1 cut(s) 1351
EcoO109I RGGNCCY 1 cut(s) 490
EcoRI GAATTC 1 cut(s) 580
EcoRII CCWGG 2 cut(s) 623, 1322
EcoT14I CCWWGG 1 cut(s) 851
EcoT22I ATGCAT 1 cut(s) 1794
ErhI CCWWGG 1 cut(s) 851
Esp3I CGTCTC 2 cut(s) 462, 773
FalI AAGNNNNNCTT 2 cut(s) 1109, 1141
FaqI GGGAC 1 cut(s) 260
FauI CCCGC 1 cut(s) 1375
FbaI TGATCA 1 cut(s) 28
Fnu4HI GCNGC 2 cut(s) 159, 1875
FokI GGATG 6 cut(s) 162, 202, 218, 1169, 1252, 1657
Fsp4HI GCNGC 2 cut(s) 159, 1875
FspBI CTAG 6 cut(s) 182, 266, 585, 1094, 1407, 1724
FspI TGCGCA 1 cut(s) 1966
GlaI GCGC 2 cut(s) 527, 1966
GluI GCNGC 2 cut(s) 159, 1875
GsuI CTGGAG 3 cut(s) 607, 1236, 1848
HaeIII GGCC 3 cut(s) 811, 1877, 1942
HgaI GACGC 2 cut(s) 479, 1190
HhaI GCGC 2 cut(s) 528, 1967
Hin1I GRCGYC 2 cut(s) 471, 1201
Hin6I GCGC 2 cut(s) 526, 1965
HinP1I GCGC 2 cut(s) 526, 1965
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HindIII AAGCTT 1 cut(s) 1287
HinfI GANTC 7 cut(s) 221, 749, 907, 1190, 1211, 1859, 1882
Hpy166II GTNNAC 1 cut(s) 61
Hpy188I TCNGA 4 cut(s) 28, 1018, 1312, 1575
Hpy188III TCNNGA 8 cut(s) 119, 404, 1087, 1154, 1165, 1215, 1382, 1827
Hpy8I GTNNAC 1 cut(s) 61
HpyAV CCTTC 9 cut(s) 142, 439, 530, 738, 769, 1250, 1357, 1645, 1980
HpyCH4III ACNGT 7 cut(s) 442, 712, 724, 784, 806, 1870, 1979
HpyCH4IV ACGT 2 cut(s) 1459, 1579
HpyCH4V TGCA 8 cut(s) 15, 98, 290, 373, 548, 1001, 1792, 1925
HpyF10VI GCNNNNNNNGC 4 cut(s) 182, 379, 1439, 1540
HpyF3I CTNAG 7 cut(s) 393, 432, 464, 486, 521, 951, 1034
HpySE526I ACGT 2 cut(s) 1459, 1579
Hsp92I GRCGYC 2 cut(s) 471, 1201
HspAI GCGC 2 cut(s) 526, 1965
Ksp22I TGATCA 1 cut(s) 28
LmnI GCTCC 1 cut(s) 1217
Lsp1109I GCAGC 1 cut(s) 170
LweI GCATC 2 cut(s) 400, 1274
MaeI CTAG 6 cut(s) 182, 266, 585, 1094, 1407, 1724
MaeII ACGT 2 cut(s) 1459, 1579
MaeIII GTNAC 3 cut(s) 827, 1240, 1755
MflI RGATCY 2 cut(s) 21, 1096
MhlI GDGCHC 1 cut(s) 1222
MlsI TGGCCA 1 cut(s) 811
MluNI TGGCCA 1 cut(s) 811
MlyI GAGTC 4 cut(s) 743, 1220, 1853, 1876
MmeI TCCRAC 5 cut(s) 477, 513, 679, 1681, 1768
Mox20I TGGCCA 1 cut(s) 811
Mph1103I ATGCAT 1 cut(s) 1794
MroXI GAANNNNTTC 1 cut(s) 1142
MscI TGGCCA 1 cut(s) 811
MslI CAYNNNNRTG 2 cut(s) 216, 879
Msp20I TGGCCA 1 cut(s) 811
MspCI CTTAAG 1 cut(s) 280
MspR9I CCNGG 2 cut(s) 625, 1324
Mva1269I GAATGC 1 cut(s) 17
MvaI CCWGG 2 cut(s) 625, 1324
MvnI CGCG 1 cut(s) 528
MwoI GCNNNNNNNGC 4 cut(s) 182, 379, 1439, 1540
NlaIV GGNNCC 1 cut(s) 1091
NmeAIII GCCGAG 1 cut(s) 439
NmuCI GTSAC 2 cut(s) 827, 1240
NsbI TGCGCA 1 cut(s) 1966
NsiI ATGCAT 1 cut(s) 1794
NspI RCATGY 1 cut(s) 1346
PceI AGGCCT 1 cut(s) 1942
PcsI WCGNNNNNNNCGW 1 cut(s) 411
PctI GAATGC 1 cut(s) 17
PdmI GAANNNNTTC 1 cut(s) 1142
PfeI GAWTC 3 cut(s) 221, 907, 1190
PfoI TCCNGGA 1 cut(s) 623
PkrI GCNGC 2 cut(s) 160, 1876
PleI GAGTC 4 cut(s) 743, 1219, 1853, 1876
PpsI GAGTC 4 cut(s) 743, 1219, 1853, 1876
PpuMI RGGWCCY 1 cut(s) 490
PshBI ATTAAT 1 cut(s) 614
PsiI TTATAA 1 cut(s) 480
Psp1406I AACGTT 1 cut(s) 1579
Psp5II RGGWCCY 1 cut(s) 490
Psp6I CCWGG 2 cut(s) 623, 1322
PspGI CCWGG 2 cut(s) 623, 1322
PspN4I GGNNCC 1 cut(s) 1091
PspPI GGNCC 1 cut(s) 490
PspPPI RGGWCCY 1 cut(s) 490
PstI CTGCAG 1 cut(s) 375
PsuI RGATCY 2 cut(s) 21, 1096
RsaI GTAC 5 cut(s) 570, 709, 726, 1279, 1712
RsaNI GTAC 5 cut(s) 569, 708, 725, 1278, 1711
RseI CAYNNNNRTG 2 cut(s) 216, 879
SatI GCNGC 2 cut(s) 159, 1875
Sau96I GGNCC 1 cut(s) 490
ScaI AGTACT 1 cut(s) 1712
SchI GAGTC 4 cut(s) 743, 1220, 1853, 1876
ScrFI CCNGG 2 cut(s) 625, 1324
SduI GDGCHC 1 cut(s) 1222
SfaNI GCATC 2 cut(s) 400, 1274
SfcI CTRYAG 1 cut(s) 371
SinI GGWCC 1 cut(s) 490
SmiMI CAYNNNNRTG 2 cut(s) 216, 879
SmlI CTYRAG 1 cut(s) 280
SmoI CTYRAG 1 cut(s) 280
SseBI AGGCCT 1 cut(s) 1942
SsiI CCGC 5 cut(s) 270, 856, 1368, 1555, 1874
SspMI CTAG 6 cut(s) 182, 266, 585, 1094, 1407, 1724
StuI AGGCCT 1 cut(s) 1942
StyD4I CCNGG 2 cut(s) 623, 1322
StyI CCWWGG 1 cut(s) 851
TaaI ACNGT 7 cut(s) 442, 712, 724, 784, 806, 1870, 1979
TaiI ACGT 2 cut(s) 1462, 1582
TaqI TCGA 4 cut(s) 135, 405, 1383, 1598
TatI WGTACW 2 cut(s) 707, 1710
TauI GCSGC 1 cut(s) 1877
TfiI GAWTC 3 cut(s) 221, 907, 1190
TscAI CASTG 3 cut(s) 366, 375, 1258
TseFI GTSAC 2 cut(s) 827, 1240
TseI GCWGC 1 cut(s) 158
Tsp45I GTSAC 2 cut(s) 827, 1240
TspDTI ATGAA 9 cut(s) 219, 220, 234, 392, 584, 629, 1810, 1884, 1916
TspRI CASTG 3 cut(s) 366, 375, 1258
Vha464I CTTAAG 1 cut(s) 280
VpaK11BI GGWCC 1 cut(s) 490
VspI ATTAAT 1 cut(s) 614
XagI CCTNNNNNAGG 1 cut(s) 1351
XapI RAATTY 6 cut(s) 580, 1021, 1139, 1817, 1832, 1933
XceI RCATGY 1 cut(s) 1346
XmnI GAANNNNTTC 1 cut(s) 1142
XspI CTAG 6 cut(s) 182, 266, 585, 1094, 1407, 1724
ZrmI AGTACT 1 cut(s) 1712
Zsp2I ATGCAT 1 cut(s) 1794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.