Rw1G017700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
39207272 .. 39220238
12967 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G017700.1

Sequence Viewer

Length: 2244 bp
ATGGCTCTGTTCCGAAGTCACAGGGCGTCCCTTTCCAAATATACTACCTCTCCTTATCCATTTCGCTATCACGTGTTCTTGAGCTTCAGAGGTGAGGACACTCGAAATAACTTCACCGATCACCTCTACACGGCTCTGGTCAATGCTGGATATCATACTTTCCGAGATGACCCTGAACTTGAGAAAGGGGAAAATATCAAGGAAAAGCTTGAGAATGCCATTCGACAGTCACGGAGTTCTGTGATTGTGTTTTCGAAAGACTACACCTCTTCCAGATGGTGCCTGGACGAGCTTGTTATGATCCTTCAACTCAAGAGAACCTCCGATCATGTTGTCTTACCGGTCTTCTACGACGTCGATCCATCTCAACTGAGGAAACAGGCAGAAACTCTTTCAAAGGTTCCTAAATACCAAGAAAATCAATCGTCGGAGAAGTTGAATGGATGGCAGGCAGCGCTTAGAGAAGTTGCAGATCTAGCAGGCATGGTTTTACAAAATGAAGCCGACGGGCACGAGTCAAAGTTCATCCAAAAAATTGTTACAGTGATTCAAGACAAGCTAGGTCGTGTGCCCCTGACCGATGTCCAGGAGGTGTTACAGAAGAAGTTGTTGTTTATTAAGCCTCACCTCGATGACGCGGAGGGGAAGCAACTAAACAACCCAACTGTGAAGGCATGGCTCCATGAGCTTAAAGAAGCTGTCTATGATACCGAGGACCTATTGCAGGAGATCAAAACAGAAGCATTAAGACGAAAGATGGAACCCGAATCTGGAAGTAGCACGAGTAAGGTACAAGACCTCAACTCTAGTGTTCCATCTCATGCTTTTGACTCAACATTAAGTTACCTCAAGGTAGAGGAAGTTCTTAATAGACTTGATTCCATTATGGAAAAGAGAAAAGATGTCTTGGGTTTGCAAGGAAGTGCTGGATATAGGGTATCACAAACACTACCGTCAACTTCTTTGCTGGAAGACTCTGGTGTGTGTGGTAGAGATGACGAGAAGGAGACACTTACTGAATTGTTGCTGTCGGCTGATGAAGGTGGCAATAAGATAAGTGTGATTCCTATTGTGGGTCTGGGTGGGATCGGAAAGACCACCCTTGCCCGGCTTTTGTACAATGATGATAGAGTTGAACAACATTTTAACATCAAAGCATGGGTTTGTGTTTCTGAAAAATTTGATGTTCTTCGGATCTCACAACAAATTTATGAGTCCCTTACTTTAGAAGTTTGCACCATTGTGAACTTAGAACTGCTTCAGTCAAAATTGAAGGCGGCTTTGAAGGGGAAAATGATTTTCCTTGTTCTTGATGACGTGTGGAATAAGAATTATATTGAATGGGAGGACTTAAAGCGTCCTTTTCAATTTGGAGCACATGGAAGTAAGATTATTGTCACAACACGCAATCAAGATGTTGCATGTATGGTGGGTACTCTTGAAACTCACTATCTCATGCCAATGCCTGAGGAAGATGGCTGGCAATTATTTGAAAAACATGCCTTCAAAAATGCAGGTGTTGGTGCCCGCACACATCTTGGAGAAATCGGTAGACAAATTGTTCGAAAGTGCAAGGGTCTTCCTTTGGCTATTAAGTCCCTTGCGGGTCTCTTATGTTCTAAATTAAATGTGGGTGAATGGGAAACTATATTGAACAGTGACCTGTGGGAGTTGCCTTTGGAGAGTGACATTCTGCCATCTCTTTGGTTGAGCTATATGCACCTGCCTTCACAACTCAAACATTGTTTTGCATATTGTTCAATATTTCCCAAGAACTATGAGTTCAGCACATCAGAATTGGTTTGCTTGTGGAAGGCTGAAGATCTATTGCAACCTAAAAAAAACAAAACTATAGACGAAATCGGAGAAGATTACTTCAATGATCTAATCTCAATGTCATTTTTTCAAGTTTCATCAAGTTCAGATCAATATTTCATGCATGACCTTATCAATGATTTAGCAAGCTTTGTATCAGGAGAATTTTGTTTTAGGTGGGAAGGCAGTGATTCAAACAACAATTTGAGCAACACTCTTCACTTTTCATATATACTCGTCATTTCTCATATATGGAGAAACACGGTGATAGCTTTGCCAAACTTGAGGTTATACATCAAGCTAAATATTTGCGCACTCTTCTACCTGTACCTCAATATGCATCCTATCTGGGGACATTATTCTATGGAGACAAATTCCAAAAAGTACTACATGAGGTATTGCCAAAACTACAATGTTCAAGAATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

747

Amino Acids

85.65

Weight (kDa)

5.84

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TIR PF01582 23 - 193 3.1e-44 TIR domain
TIR_2 PF13676 25 - 124 4.6e-18 TIR domain
Rx_N PF18052 175 - 258 1.5e-15 Rx N-terminal domain
AAA_16 PF13191 329 - 421 6e-06 AAA ATPase domain
NB-ARC PF00931 332 - 504 2.3e-34 NB-ARC domain
WHD_DRP PF23559 588 - 654 5e-23 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1505, 1731
AatII GACGTC 1 cut(s) 357
Acc16I TGCGCA 1 cut(s) 2128
Acc36I ACCTGC 2 cut(s) 1505, 1731
AccB1I GGYRCC 2 cut(s) 279, 1523
AccI GTMKAC 1 cut(s) 1552
AccII CGCG 1 cut(s) 638
AciI CCGC 4 cut(s) 638, 1277, 1528, 1604
AclWI GGATC 4 cut(s) 295, 353, 1094, 1202
AcsI RAATTY 4 cut(s) 1178, 1206, 1979, 2188
AcuI CTGAAG 3 cut(s) 70, 1244, 1839
AcvI CACGTG 1 cut(s) 73
AcyI GRCGYC 2 cut(s) 26, 354
AfaI GTAC 5 cut(s) 792, 1118, 1435, 2144, 2201
AfeI AGCGCT 1 cut(s) 456
AfiI CCNNNNNNNGG 6 cut(s) 130, 724, 770, 1073, 1107, 2165
AflIII ACRYGT 2 cut(s) 72, 1317
AgeI ACCGGT 1 cut(s) 340
AjiI CACGTC 1 cut(s) 1318
AjnI CCWGG 2 cut(s) 282, 585
AleI CACNNNNGTG 1 cut(s) 1241
Alw21I GWGCWC 1 cut(s) 1378
Alw26I GTCTC 3 cut(s) 1001, 1613, 2177
AlwI GGATC 4 cut(s) 295, 353, 1094, 1202
Aor51HI AGCGCT 1 cut(s) 456
ApeKI GCWGC 1 cut(s) 452
ApoI RAATTY 4 cut(s) 1178, 1206, 1979, 2188
ArsI GACNNNNNNTTYG 2 cut(s) 1545, 1577
AsiGI ACCGGT 1 cut(s) 340
Asp700I GAANNNNTTC 1 cut(s) 1257
AspLEI GCGC 2 cut(s) 457, 2129
AspS9I GGNCC 1 cut(s) 715
AsuC2I CCSGG 1 cut(s) 1108
AsuHPI GGTGA 6 cut(s) 104, 106, 113, 617, 1646, 2092
AsuII TTCGAA 2 cut(s) 254, 1564
AvaII GGWCC 1 cut(s) 715
AxyI CCTNAGG 1 cut(s) 1467
BaeGI GKGCMC 3 cut(s) 513, 573, 1528
BanI GGYRCC 2 cut(s) 279, 1523
BauI CACGAG 2 cut(s) 512, 781
BbrPI CACGTG 1 cut(s) 73
BbsI GAAGAC 3 cut(s) 337, 978, 1571
Bbv12I GWGCWC 1 cut(s) 1378
BbvI GCAGC 1 cut(s) 464
BccI CCATC 7 cut(s) 270, 370, 438, 751, 823, 1469, 1705
BceAI ACGGC 1 cut(s) 147
BciT130I CCWGG 2 cut(s) 284, 587
BcnI CCSGG 1 cut(s) 1108
BcoDI GTCTC 3 cut(s) 1001, 1613, 2177
BfaI CTAG 3 cut(s) 476, 560, 807
BfmI CTRYAG 1 cut(s) 1851
BfoI RGCGCY 1 cut(s) 458
BfuAI ACCTGC 2 cut(s) 1505, 1731
BglII AGATCT 2 cut(s) 472, 1822
BisI GCNGC 2 cut(s) 453, 1278
BlsI GCNGC 2 cut(s) 454, 1279
BmcAI AGTACT 1 cut(s) 2201
Bme1390I CCNGG 3 cut(s) 284, 587, 1108
Bme18I GGWCC 1 cut(s) 715
BmgBI CACGTC 1 cut(s) 1318
BmgT120I GGNCC 1 cut(s) 715
BmiI GGNNCC 5 cut(s) 281, 402, 680, 762, 1525
BmrFI CCNGG 3 cut(s) 284, 587, 1108
BmsI GCATC 1 cut(s) 2164
BoxI GACNNNNGTC 1 cut(s) 581
BpiI GAAGAC 3 cut(s) 337, 978, 1571
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
Bpu14I TTCGAA 2 cut(s) 254, 1564
BpuEI CTTGAG 6 cut(s) 100, 200, 230, 296, 833, 2119
BpuMI CCSGG 1 cut(s) 1108
BsaAI YACGTR 1 cut(s) 73
BsaHI GRCGYC 2 cut(s) 26, 354
BsaI GGTCTC 1 cut(s) 1613
BsaJI CCNNGG 1 cut(s) 711
BsaWI WCCGGW 1 cut(s) 340
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 6 cut(s) 130, 724, 770, 1073, 1107, 2165
Bse118I RCCGGY 1 cut(s) 340
Bse21I CCTNAGG 1 cut(s) 1467
BseBI CCWGG 2 cut(s) 284, 587
BseDI CCNNGG 1 cut(s) 711
BseGI GGATG 3 cut(s) 449, 525, 2155
BseLI CCNNNNNNNGG 6 cut(s) 130, 724, 770, 1073, 1107, 2165
BseMII CTCAG 2 cut(s) 362, 1458
BseSI GKGCMC 3 cut(s) 513, 573, 1528
BseXI GCAGC 1 cut(s) 464
Bsh1236I CGCG 1 cut(s) 638
BshNI GGYRCC 2 cut(s) 279, 1523
BshTI ACCGGT 1 cut(s) 340
BsiHKAI GWGCWC 1 cut(s) 1378
BsiSI CCGG 2 cut(s) 341, 1108
BslFI GGGAC 4 cut(s) 13, 1201, 1582, 2181
BslI CCNNNNNNNGG 6 cut(s) 130, 724, 770, 1073, 1107, 2165
BsmAI GTCTC 3 cut(s) 1001, 1613, 2177
BsmFI GGGAC 4 cut(s) 13, 1201, 1582, 2181
BsmI GAATGC 1 cut(s) 220
Bso31I GGTCTC 1 cut(s) 1613
Bsp119I TTCGAA 2 cut(s) 254, 1564
Bsp1286I GDGCHC 4 cut(s) 513, 573, 1378, 1528
Bsp1407I TGTACA 1 cut(s) 1116
BspACI CCGC 4 cut(s) 638, 1277, 1528, 1604
BspCNI CTCAG 2 cut(s) 363, 1459
BspFNI CGCG 1 cut(s) 638
BspLI GGNNCC 5 cut(s) 281, 402, 680, 762, 1525
BspMI ACCTGC 2 cut(s) 1505, 1731
BspPI GGATC 4 cut(s) 295, 353, 1094, 1202
BspT104I TTCGAA 2 cut(s) 254, 1564
BspT107I GGYRCC 2 cut(s) 279, 1523
BspTNI GGTCTC 1 cut(s) 1613
BsrFI RCCGGY 1 cut(s) 340
BsrGI TGTACA 1 cut(s) 1116
BssAI RCCGGY 1 cut(s) 340
BssECI CCNNGG 1 cut(s) 711
BssNI GRCGYC 2 cut(s) 26, 354
BssSI CACGAG 2 cut(s) 512, 781
Bst2BI CACGAG 2 cut(s) 512, 781
Bst2UI CCWGG 2 cut(s) 284, 587
Bst4CI ACNGT 6 cut(s) 228, 544, 667, 954, 1658, 2080
Bst6I CTCTTC 3 cut(s) 274, 2037, 2138
BstACI GRCGYC 2 cut(s) 26, 354
BstAUI TGTACA 1 cut(s) 1116
BstBAI YACGTR 1 cut(s) 73
BstBI TTCGAA 2 cut(s) 254, 1564
BstC8I GCNNGC 5 cut(s) 450, 481, 1481, 1528, 1963
BstDEI CTNAG 4 cut(s) 371, 458, 1249, 1467
BstENI CCTNNNNNAGG 1 cut(s) 722
BstF5I GGATG 3 cut(s) 449, 525, 2155
BstFNI CGCG 1 cut(s) 638
BstH2I RGCGCY 1 cut(s) 458
BstHHI GCGC 2 cut(s) 457, 2129
BstMAI GTCTC 3 cut(s) 1001, 1613, 2177
BstMWI GCNNNNNNNGC 3 cut(s) 454, 476, 685
BstNI CCWGG 2 cut(s) 284, 587
BstNSI RCATGY 2 cut(s) 1425, 1502
BstPAI GACNNNNGTC 1 cut(s) 581
BstSCI CCNGG 3 cut(s) 282, 585, 1106
BstSFI CTRYAG 1 cut(s) 1851
BstSLI GKGCMC 3 cut(s) 513, 573, 1528
BstUI CGCG 1 cut(s) 638
BstV1I GCAGC 1 cut(s) 464
BstV2I GAAGAC 3 cut(s) 337, 978, 1571
BstX2I RGATCY 3 cut(s) 472, 1194, 1822
BstXI CCANNNNNNTGG 1 cut(s) 1704
BstYI RGATCY 3 cut(s) 472, 1194, 1822
Bsu36I CCTNAGG 1 cut(s) 1467
BtrI CACGTC 1 cut(s) 1318
BtsCI GGATG 3 cut(s) 449, 525, 2155
BtsI GCAGTG 1 cut(s) 2008
BtsIMutI CAGTG 3 cut(s) 549, 1663, 2008
BveI ACCTGC 2 cut(s) 1505, 1731
Cac8I GCNNGC 5 cut(s) 450, 481, 1481, 1528, 1963
CfoI GCGC 2 cut(s) 457, 2129
Cfr10I RCCGGY 1 cut(s) 340
Cfr13I GGNCC 1 cut(s) 715
CseI GACGC 3 cut(s) 15, 644, 1346
Csp6I GTAC 5 cut(s) 791, 1117, 1434, 2143, 2200
CspAI ACCGGT 1 cut(s) 340
CviQI GTAC 5 cut(s) 791, 1117, 1434, 2143, 2200
DdeI CTNAG 4 cut(s) 371, 458, 1249, 1467
Eam1104I CTCTTC 3 cut(s) 274, 2037, 2138
EarI CTCTTC 3 cut(s) 274, 2037, 2138
Eco31I GGTCTC 1 cut(s) 1613
Eco32I GATATC 1 cut(s) 152
Eco47I GGWCC 1 cut(s) 715
Eco47III AGCGCT 1 cut(s) 456
Eco57I CTGAAG 3 cut(s) 70, 1244, 1839
Eco72I CACGTG 1 cut(s) 73
Eco81I CCTNAGG 1 cut(s) 1467
EcoNI CCTNNNNNAGG 1 cut(s) 722
EcoO109I RGGNCCY 1 cut(s) 715
EcoRII CCWGG 2 cut(s) 282, 585
EcoRV GATATC 1 cut(s) 152
EcoT22I ATGCAT 2 cut(s) 1941, 2157
FaqI GGGAC 4 cut(s) 13, 1201, 1582, 2181
FauI CCCGC 2 cut(s) 1535, 1597
FblI GTMKAC 1 cut(s) 1552
Fnu4HI GCNGC 2 cut(s) 453, 1278
FokI GGATG 3 cut(s) 456, 512, 2142
Fsp4HI GCNGC 2 cut(s) 453, 1278
FspBI CTAG 3 cut(s) 476, 560, 807
FspI TGCGCA 1 cut(s) 2128
GlaI GCGC 2 cut(s) 456, 2128
GluI GCNGC 2 cut(s) 453, 1278
HaeII RGCGCY 1 cut(s) 458
HapII CCGG 2 cut(s) 341, 1108
HgaI GACGC 3 cut(s) 15, 644, 1346
HhaI GCGC 2 cut(s) 457, 2129
Hin1I GRCGYC 2 cut(s) 26, 354
Hin6I GCGC 2 cut(s) 455, 2127
HinP1I GCGC 2 cut(s) 455, 2127
HincII GTYRAC 1 cut(s) 957
HindII GTYRAC 1 cut(s) 957
HindIII AAGCTT 2 cut(s) 206, 1963
HinfI GANTC 9 cut(s) 515, 547, 767, 830, 878, 974, 1063, 1214, 2006
HpaII CCGG 2 cut(s) 341, 1108
HphI GGTGA 6 cut(s) 104, 106, 113, 617, 1646, 2092
Hpy166II GTNNAC 3 cut(s) 957, 1246, 1553
Hpy8I GTNNAC 3 cut(s) 957, 1246, 1553
Hpy99I CGWCG 4 cut(s) 356, 359, 430, 509
HpyCH4III ACNGT 6 cut(s) 228, 544, 667, 954, 1658, 2080
HpyCH4IV ACGT 3 cut(s) 72, 354, 1317
HpyF10VI GCNNNNNNNGC 3 cut(s) 454, 476, 685
HpyF3I CTNAG 4 cut(s) 371, 458, 1249, 1467
HpySE526I ACGT 3 cut(s) 72, 354, 1317
Hsp92I GRCGYC 2 cut(s) 26, 354
HspAI GCGC 2 cut(s) 455, 2127
LmnI GCTCC 2 cut(s) 684, 1373
Lsp1109I GCAGC 1 cut(s) 464
LweI GCATC 1 cut(s) 2164
MaeI CTAG 3 cut(s) 476, 560, 807
MaeII ACGT 3 cut(s) 72, 354, 1317
MaeIII GTNAC 8 cut(s) 17, 228, 538, 594, 842, 1396, 1658, 1685
MflI RGATCY 3 cut(s) 472, 1194, 1822
MhlI GDGCHC 4 cut(s) 513, 573, 1378, 1528
MlyI GAGTC 4 cut(s) 524, 824, 968, 1223
MmeI TCCRAC 1 cut(s) 408
Mph1103I ATGCAT 2 cut(s) 1941, 2157
MroXI GAANNNNTTC 1 cut(s) 1257
MseI TTAA 9 cut(s) 618, 690, 746, 839, 867, 1146, 1352, 1593, 1625
MslI CAYNNNNRTG 3 cut(s) 630, 1241, 1460
MspI CCGG 2 cut(s) 341, 1108
MspR9I CCNGG 3 cut(s) 284, 587, 1108
Mva1269I GAATGC 1 cut(s) 220
MvaI CCWGG 2 cut(s) 284, 587
MvnI CGCG 1 cut(s) 638
MwoI GCNNNNNNNGC 3 cut(s) 454, 476, 685
NciI CCSGG 1 cut(s) 1108
NlaIV GGNNCC 5 cut(s) 281, 402, 680, 762, 1525
NmuCI GTSAC 5 cut(s) 17, 228, 1396, 1658, 1685
NsbI TGCGCA 1 cut(s) 2128
NsiI ATGCAT 2 cut(s) 1941, 2157
NspI RCATGY 2 cut(s) 1425, 1502
NspV TTCGAA 2 cut(s) 254, 1564
OliI CACNNNNGTG 1 cut(s) 1241
PaqCI CACCTGC 2 cut(s) 1505, 1731
PctI GAATGC 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 1257
PfeI GAWTC 5 cut(s) 547, 767, 878, 1063, 2006
PfoI TCCNGGA 1 cut(s) 585
PinAI ACCGGT 1 cut(s) 340
PkrI GCNGC 2 cut(s) 454, 1279
PleI GAGTC 4 cut(s) 523, 824, 968, 1222
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 4 cut(s) 523, 824, 968, 1222
Ppu21I YACGTR 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 715
PshAI GACNNNNGTC 1 cut(s) 581
Psp5II RGGWCCY 1 cut(s) 715
Psp6I CCWGG 2 cut(s) 282, 585
PspCI CACGTG 1 cut(s) 73
PspGI CCWGG 2 cut(s) 282, 585
PspN4I GGNNCC 5 cut(s) 281, 402, 680, 762, 1525
PspPI GGNCC 1 cut(s) 715
PspPPI RGGWCCY 1 cut(s) 715
PsrI GAACNNNNNNTAC 2 cut(s) 846, 878
PsuI RGATCY 3 cut(s) 472, 1194, 1822
RsaI GTAC 5 cut(s) 792, 1118, 1435, 2144, 2201
RsaNI GTAC 5 cut(s) 791, 1117, 1434, 2143, 2200
RseI CAYNNNNRTG 3 cut(s) 630, 1241, 1460
SaqAI TTAA 9 cut(s) 618, 690, 746, 839, 867, 1146, 1352, 1593, 1625
SatI GCNGC 2 cut(s) 453, 1278
Sau96I GGNCC 1 cut(s) 715
ScaI AGTACT 1 cut(s) 2201
SchI GAGTC 4 cut(s) 524, 824, 968, 1223
ScrFI CCNGG 3 cut(s) 284, 587, 1108
SduI GDGCHC 4 cut(s) 513, 573, 1378, 1528
SfaNI GCATC 1 cut(s) 2164
SfcI CTRYAG 1 cut(s) 1851
SfuI TTCGAA 2 cut(s) 254, 1564
SinI GGWCC 1 cut(s) 715
SmiMI CAYNNNNRTG 3 cut(s) 630, 1241, 1460
SmlI CTYRAG 6 cut(s) 79, 179, 209, 311, 848, 2098
SmoI CTYRAG 6 cut(s) 79, 179, 209, 311, 848, 2098
SsiI CCGC 4 cut(s) 638, 1277, 1528, 1604
SspI AATATT 3 cut(s) 1764, 1931, 2122
SspMI CTAG 3 cut(s) 476, 560, 807
StyD4I CCNGG 3 cut(s) 282, 585, 1106
TaaI ACNGT 6 cut(s) 228, 544, 667, 954, 1658, 2080
TaiI ACGT 3 cut(s) 75, 357, 1320
TaqI TCGA 6 cut(s) 103, 223, 254, 357, 630, 1564
TaqII GACCGA 1 cut(s) 593
TatI WGTACW 2 cut(s) 1116, 2199
TauI GCSGC 1 cut(s) 1280
TfiI GAWTC 5 cut(s) 547, 767, 878, 1063, 2006
Tru1I TTAA 9 cut(s) 618, 690, 746, 839, 867, 1146, 1352, 1593, 1625
Tru9I TTAA 9 cut(s) 618, 690, 746, 839, 867, 1146, 1352, 1593, 1625
TscAI CASTG 3 cut(s) 549, 1663, 2008
TseFI GTSAC 5 cut(s) 17, 228, 1396, 1658, 1685
TseI GCWGC 1 cut(s) 452
Tsp45I GTSAC 5 cut(s) 17, 228, 1396, 1658, 1685
TspDTI ATGAA 6 cut(s) 513, 514, 1053, 1902, 1924, 2031
TspGWI ACGGA 1 cut(s) 247
TspRI CASTG 3 cut(s) 549, 1663, 2008
VpaK11BI GGWCC 1 cut(s) 715
XagI CCTNNNNNAGG 1 cut(s) 722
XapI RAATTY 4 cut(s) 1178, 1206, 1979, 2188
XceI RCATGY 2 cut(s) 1425, 1502
XcmI CCANNNNNNNNNTGG 1 cut(s) 280
XmiI GTMKAC 1 cut(s) 1552
XmnI GAANNNNTTC 1 cut(s) 1257
XspI CTAG 3 cut(s) 476, 560, 807
ZraI GACGTC 1 cut(s) 355
ZrmI AGTACT 1 cut(s) 2201
Zsp2I ATGCAT 2 cut(s) 1941, 2157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.