Rmu_sc0005008.1_g000026

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005008.1
OG0000035
Physical Location & Seq
Reverse (-)
105273 .. 109161
3889 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005008.1_g000026.1.cds

Sequence Viewer

Length: 3744 bp
atggctctgttccgaagtcagaaggcctccctttccaaatatactgcctctccttacccatttcgctatcacgtgttcttgagcttcagaggtgacactcgaaagaacttcactgatcacctctacgcggctctggtcaatgccggatttcatactttccgagatgaccctcaactcgagaggggcgaaaatatcaaggaaaagcttgaggatgccattcgacagtcacaaagttctgtgattgtgttttcgaaagactacacctcttccagatggtgtctggacgagcttgtcatgatccttgaacgcaagaggacctcccatcatgttgtgttaccggtcttctacgacgtcgatccaacccatgtgaggaagcaggcagaggctctttcaaaggttcctaaataccaagaaaatcaatcgtcggagaagttgaatggatggcgggcagcgcttagagaagttgcagatctagcaggcatggttttacaaaatgaagctgacgggcacgagtcaaagttcatccataatatcgttacagtgattcaagacaaactaggtcgtgtgcccctgaccgatgtccaggaggtgttacaaaagaaattgttttttattaacccttacctcgatgacgccgaggggaagcaactgaacaacccaactgtgaaggcatggctcagtgaacttgaagaagctgtctatgataccgaggacctattgcaggagatcaagacagaagcattaagactaaagatggaacccgaatctggaagtagcacgagtaaggtacgtgcagacctcaactcaagtcctctatcccaggcttttgactcaacattaatttacctcagggtagaggaggttcttaatacactagatttcattatggagaagagaaaagatgtctggggtttggaagcaacagctggatacagggtatcacaaacactacagtcttctttgctcgaagactctggtgtgtgtggtagagatgacgaaaaggagacactaattaaattgttgctatcagatgatgagggtggcaataagataagtgtgattcctattatgggtatgggtgggatcggaaagaccacccttgcccagtttttgtacaatgatgttagagttgaacaacattttgacatccaagcatgggcttgtgtttctgaaaactttgatgttctttggatctcacaacaaatttgtgagtcccttacttcagacgcttgcttcatcttgaatttaaatctgcttcagtcaaaactgaaggctgcattgatggggaaaaagtttttcttggttgttgatgacatttggaccaagaattatactgaatgggaggtcttaaggcgtccttttcaatttggagcgcagggaagtaagattattgtcacaacacgcaatcaagatgttgcatgtatggtgggtactcttgaagctcactatctcatgccaatgcctgagaaagatggctggcaattatttgaaaaacatgccttcaaaaatgcaggtgttggtgtgcgcgcacatcttggagaaatcggtagacaaattgttcgaaagtgcaagggtcttcctttggctattaagtcccttgcgggtctcttatgttctaaattaaatgtgggtgaatgggaaactatattgaacagtgacctgtgggagttgcctttggagagtgacattctgccatctctatggttgagctatctagatttgcctctacatctcaagcgttgttttgcctattgttcactgtatcccaagaactataaatttcaaaaatcagagttgatttacttgtggatggctgaagatctattgcaacataaaaaaaacaaagaggcagaagaagtcggccaagactatttcaacgatctaatctcaagatcaatttttcaactttcatcaaattccggtaaatatttcatcatgcatggccttatcaatgatttagcaagctttgtatcaggagaattttgttttaggtggaagggcagtgattcacccaaaaatttgagcaagactcgtcgcttttcatgtgtgccggaatatcaagataaggctaatagcctagagatgtttgaggctttacggcaagctgaatgtttgcacacctttctatcattgaatggatccccaatttatatggccaagctaaatgtgcggtcgaagttgtcgaataaaggactctacgaagcattgccaaagtttcaatgtttaagaatgctcaagttatcatggtacgatattaaggaattgcctgattcaattaacaacttgaaacatcttaagcacttggacttgtcttacagttccatcgtaaagttacctgagacaatttgtactttgtataacttgcaagcattgttgttggcagagtgttcgtatcttactgagctgccagccaacttgggaagattgatcaacttgagccatctggatattacagagacaaggttaaaaaagatgccaccacaaatgggtaagttgaaggacctccagatgctacccgagtttgtgctagacaaacacactgccatggataatttggcagagttaaagaagcttgaaaaattgcgtagaagacttcgtatttcagggcttgtgcatggcagcggtttggaggcctacatactgagggacaagaagtttcttaaggaactggttttggattggagaagatgggattcaagtgaagaaggcaataatactgtagaagaaagagaagtgctagagaagctccaacctcacctgaacctggaaaggcttaaaattgaaggttatggtggcaaaatgtttccaggttggtcagaatattattcttcccctgctcttgtttctgttaaacttgttaattgtcagaattgtatctccttgccaccattgggacagctaccttccctcagagagctttatattgatgggttaaatgaagtggtgtccataggttctgaattctattatggtgacggcaatactactacttgtgtaaacaaaccatttagatctctacggactttaatattctccggtatgagtgggtggaaagaatggtcttatgttggaggtggcaataatgaagatggggtttttcctaatcttgaggagcttgatctatcatggtgtcccaatcttaccgggggattagcgtcaggcagtcttccatctcttgtgtctctgtgggtgaaagattgcccagaattcgaatgtattccgcaaggtggattcccgtcaaagttaaaaacacttatcagcgactgtaaaaaagtgaatgcaaagagcatgcagaatctgaaaaagggtctccgaacactcacctctcttgaagaattgacacttgattttgactgcgacgaaaaagtagattggtttgcggaagaggggctgtttcccagcactctcacatatctcaagatctgccgtctgaattgtaagaccatcgacggcgccaagtggtttggccatctcaactctcttcaacaattggttatctgcgactgctctgccctccggtgcttgccagatagtgggctacccacttctcttcaactcttgcagatttggagttgccctgctctgcagtgcttgccagatagtggactaccctcttctctttctggtctacaaatctgtcaatgtccaagattgcttgtgagacggtgccaaagagagacgggtgaagattggcccaagattgctcacatcaagcacatagagatcaatttcaaaacgatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1247

Amino Acids

141.86

Weight (kDa)

6.27

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1502
AasI GACNNNNNNGTC 1 cut(s) 290
AatII GACGTC 1 cut(s) 354
Acc36I ACCTGC 1 cut(s) 1502
AccB1I GGYRCC 2 cut(s) 3452, 3666
AccB7I CCANNNNNTGG 2 cut(s) 3533, 3602
AccI GTMKAC 2 cut(s) 1549, 3628
AccII CGCG 2 cut(s) 128, 1527
AciI CCGC 7 cut(s) 128, 445, 1601, 2170, 2622, 3221, 3380
AclWI GGATC 6 cut(s) 292, 350, 1091, 1199, 2133, 2146
AcoI YGGCCR 3 cut(s) 1861, 2154, 3466
AcsI RAATTY 8 cut(s) 1203, 1243, 1778, 1915, 1979, 2017, 2960, 3206
AcuI CTGAAG 5 cut(s) 70, 1206, 1241, 1289, 1836
AcvI CACGTG 1 cut(s) 73
AcyI GRCGYC 4 cut(s) 351, 633, 1354, 3453
AfaI GTAC 5 cut(s) 789, 1115, 1432, 2249, 2350
AfeI AGCGCT 1 cut(s) 453
AflII CTTAAG 3 cut(s) 1348, 2294, 2660
AflIII ACRYGT 1 cut(s) 72
AgeI ACCGGT 1 cut(s) 337
AjnI CCWGG 4 cut(s) 582, 819, 2763, 2806
Alw26I GTCTC 8 cut(s) 998, 1610, 2333, 2450, 3186, 3314, 3655, 3671
AlwI GGATC 6 cut(s) 292, 350, 1091, 1199, 2133, 2146
AlwNI CAGNNNCTG 2 cut(s) 3264, 3298
Ama87I CYCGRG 2 cut(s) 176, 2516
Aor51HI AGCGCT 1 cut(s) 453
AoxI GGCC 7 cut(s) 24, 1861, 1942, 2154, 2631, 3466, 3692
ApeKI GCWGC 4 cut(s) 449, 1274, 2404, 2619
ApoI RAATTY 8 cut(s) 1203, 1243, 1778, 1915, 1979, 2017, 2960, 3206
ArsI GACNNNNNNTTYG 2 cut(s) 1542, 1574
AseI ATTAAT 1 cut(s) 839
AsiGI ACCGGT 1 cut(s) 337
Asp700I GAANNNNTTC 1 cut(s) 3216
AspLEI GCGC 5 cut(s) 454, 1375, 1527, 1529, 3455
AspS9I GGNCC 5 cut(s) 315, 712, 1320, 2500, 3693
AsuC2I CCSGG 1 cut(s) 3145
AsuHPI GGTGA 9 cut(s) 104, 110, 1643, 2001, 2747, 2984, 3202, 3313, 3695
AsuII TTCGAA 3 cut(s) 251, 1561, 3210
AvaI CYCGRG 2 cut(s) 176, 2516
AvaII GGWCC 4 cut(s) 315, 712, 1320, 2500
AxyI CCTNAGG 1 cut(s) 848
BaeGI GKGCMC 2 cut(s) 510, 570
BalI TGGCCA 2 cut(s) 2156, 3468
BamHI GGATCC 1 cut(s) 2138
BanI GGYRCC 2 cut(s) 3452, 3666
BauI CACGAG 2 cut(s) 509, 778
BbrPI CACGTG 1 cut(s) 73
BbsI GAAGAC 6 cut(s) 334, 948, 975, 1568, 2596, 3158
BbvI GCAGC 4 cut(s) 461, 1261, 2391, 2631
BceAI ACGGC 4 cut(s) 2114, 2992, 3411, 3466
BcgI CGANNNNNNTGC 4 cut(s) 2370, 2404, 3491, 3525
BciT130I CCWGG 4 cut(s) 584, 821, 2765, 2808
BciVI GTATCC 2 cut(s) 923, 1773
BclI TGATCA 2 cut(s) 115, 2427
BcnI CCSGG 1 cut(s) 3145
BcoDI GTCTC 8 cut(s) 998, 1610, 2333, 2450, 3186, 3314, 3655, 3671
BfaI CTAG 7 cut(s) 473, 557, 875, 1715, 2078, 2528, 2738
BfmI CTRYAG 3 cut(s) 950, 2718, 3584
BfoI RGCGCY 2 cut(s) 455, 3456
BfrI CTTAAG 3 cut(s) 1348, 2294, 2660
BfuAI ACCTGC 1 cut(s) 1502
BfuI GTATCC 2 cut(s) 923, 1773
BglII AGATCT 4 cut(s) 469, 1819, 3011, 3420
BisI GCNGC 5 cut(s) 129, 450, 1275, 2405, 2620
BlsI GCNGC 5 cut(s) 130, 451, 1276, 2406, 2621
Bme1390I CCNGG 5 cut(s) 584, 821, 2765, 2808, 3145
Bme18I GGWCC 4 cut(s) 315, 712, 1320, 2500
BmeT110I CYCGRG 2 cut(s) 176, 2516
BmgT120I GGNCC 5 cut(s) 315, 712, 1320, 2500, 3693
BmiI GGNNCC 5 cut(s) 399, 759, 2140, 3454, 3668
BmrFI CCNGG 5 cut(s) 584, 821, 2765, 2808, 3145
BmrI ACTGGG 1 cut(s) 1099
BmsI GCATC 3 cut(s) 202, 2463, 2499
BmuI ACTGGG 1 cut(s) 1099
BoxI GACNNNNGTC 1 cut(s) 578
BpiI GAAGAC 6 cut(s) 334, 948, 975, 1568, 2596, 3158
BplI GAGNNNNNCTC 2 cut(s) 2014, 2046
BpmI CTGGAG 1 cut(s) 2489
Bpu14I TTCGAA 3 cut(s) 251, 1561, 3210
BpuEI CTTGAG 9 cut(s) 100, 227, 790, 1718, 1873, 2219, 2455, 3128, 3401
BpuMI CCSGG 1 cut(s) 3145
BsaAI YACGTR 2 cut(s) 73, 791
BsaHI GRCGYC 4 cut(s) 351, 633, 1354, 3453
BsaI GGTCTC 2 cut(s) 1610, 3314
BsaJI CCNNGG 5 cut(s) 636, 708, 819, 2544, 3144
BsaWI WCCGGW 4 cut(s) 337, 1919, 3035, 3516
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bse118I RCCGGY 1 cut(s) 337
Bse1I ACTGG 2 cut(s) 1105, 2673
Bse21I CCTNAGG 1 cut(s) 848
Bse3DI GCAATG 1 cut(s) 2204
BseBI CCWGG 4 cut(s) 584, 821, 2765, 2808
BseDI CCNNGG 5 cut(s) 636, 708, 819, 2544, 3144
BseGI GGATG 5 cut(s) 217, 446, 522, 1146, 1815
BseMI GCAATG 1 cut(s) 2204
BseMII CTCAG 7 cut(s) 691, 862, 1455, 2328, 2391, 2633, 2923
BseNI ACTGG 2 cut(s) 1105, 2673
BsePI GCGCGC 1 cut(s) 1525
BseRI GAGGAG 2 cut(s) 872, 3125
BseSI GKGCMC 2 cut(s) 510, 570
BseXI GCAGC 4 cut(s) 461, 1261, 2391, 2631
BseYI CCCAGC 1 cut(s) 3398
BsgI GTGCAG 1 cut(s) 813
Bsh1236I CGCG 2 cut(s) 128, 1527
Bsh1285I CGRYCG 1 cut(s) 2174
BshFI GGCC 7 cut(s) 26, 1863, 1944, 2156, 2633, 3468, 3694
BshNI GGYRCC 2 cut(s) 3452, 3666
BshTI ACCGGT 1 cut(s) 337
BsiEI CGRYCG 1 cut(s) 2174
BsiHKCI CYCGRG 2 cut(s) 176, 2516
BsiSI CCGG 7 cut(s) 144, 338, 1920, 2051, 3036, 3144, 3517
BslFI GGGAC 5 cut(s) 1198, 1579, 2660, 2907, 3117
BsmAI GTCTC 8 cut(s) 998, 1610, 2333, 2450, 3186, 3314, 3655, 3671
BsmBI CGTCTC 2 cut(s) 3655, 3671
BsmFI GGGAC 5 cut(s) 1198, 1579, 2660, 2907, 3117
BsmI GAATGC 2 cut(s) 2235, 3283
BsnI GGCC 7 cut(s) 26, 1863, 1944, 2156, 2633, 3468, 3694
Bso31I GGTCTC 2 cut(s) 1610, 3314
BsoBI CYCGRG 2 cut(s) 176, 2516
Bsp119I TTCGAA 3 cut(s) 251, 1561, 3210
Bsp1286I GDGCHC 2 cut(s) 510, 570
Bsp1407I TGTACA 1 cut(s) 1113
Bsp19I CCATGG 1 cut(s) 2544
BspACI CCGC 7 cut(s) 128, 445, 1601, 2170, 2622, 3221, 3380
BspANI GGCC 7 cut(s) 26, 1863, 1944, 2156, 2633, 3468, 3694
BspCNI CTCAG 7 cut(s) 690, 861, 1456, 2329, 2392, 2634, 2922
BspFNI CGCG 2 cut(s) 128, 1527
BspHI TCATGA 1 cut(s) 294
BspLI GGNNCC 5 cut(s) 399, 759, 2140, 3454, 3668
BspMAI CTGCAG 1 cut(s) 3588
BspMI ACCTGC 1 cut(s) 1502
BspPI GGATC 6 cut(s) 292, 350, 1091, 1199, 2133, 2146
BspT104I TTCGAA 3 cut(s) 251, 1561, 3210
BspT107I GGYRCC 2 cut(s) 3452, 3666
BspTI CTTAAG 3 cut(s) 1348, 2294, 2660
BspTNI GGTCTC 2 cut(s) 1610, 3314
BsrDI GCAATG 1 cut(s) 2204
BsrFI RCCGGY 1 cut(s) 337
BsrGI TGTACA 1 cut(s) 1113
BsrI ACTGG 2 cut(s) 1105, 2673
BssAI RCCGGY 1 cut(s) 337
BssECI CCNNGG 5 cut(s) 636, 708, 819, 2544, 3144
BssHII GCGCGC 1 cut(s) 1525
BssNI GRCGYC 4 cut(s) 351, 633, 1354, 3453
BssSI CACGAG 2 cut(s) 509, 778
BssT1I CCWWGG 1 cut(s) 2544
Bst2BI CACGAG 2 cut(s) 509, 778
Bst2UI CCWGG 4 cut(s) 584, 821, 2765, 2808
Bst6I CTCTTC 6 cut(s) 271, 887, 3378, 3486, 3555, 3619
BstACI GRCGYC 4 cut(s) 351, 633, 1354, 3453
BstAFI CTTAAG 3 cut(s) 1348, 2294, 2660
BstAPI GCANNNNNTGC 1 cut(s) 3592
BstAUI TGTACA 1 cut(s) 1113
BstBAI YACGTR 2 cut(s) 73, 791
BstBI TTCGAA 3 cut(s) 251, 1561, 3210
BstDEI CTNAG 8 cut(s) 455, 677, 848, 1464, 2337, 2400, 2642, 2909
BstDSI CCRYGG 1 cut(s) 2544
BstENI CCTNNNNNAGG 1 cut(s) 719
BstF5I GGATG 5 cut(s) 217, 446, 522, 1146, 1815
BstFNI CGCG 2 cut(s) 128, 1527
BstH2I RGCGCY 2 cut(s) 455, 3456
BstHHI GCGC 5 cut(s) 454, 1375, 1527, 1529, 3455
BstMAI GTCTC 8 cut(s) 998, 1610, 2333, 2450, 3186, 3314, 3655, 3671
BstMCI CGRYCG 1 cut(s) 2174
BstMWI GCNNNNNNNGC 5 cut(s) 451, 473, 2167, 2743, 3592
BstNI CCWGG 4 cut(s) 584, 821, 2765, 2808
BstNSI RCATGY 3 cut(s) 1422, 1499, 3292
BstPAI GACNNNNGTC 1 cut(s) 578
BstSCI CCNGG 5 cut(s) 582, 819, 2763, 2806, 3143
BstSFI CTRYAG 3 cut(s) 950, 2718, 3584
BstSLI GKGCMC 2 cut(s) 510, 570
BstUI CGCG 2 cut(s) 128, 1527
BstV1I GCAGC 4 cut(s) 461, 1261, 2391, 2631
BstV2I GAAGAC 6 cut(s) 334, 948, 975, 1568, 2596, 3158
BstX2I RGATCY 6 cut(s) 469, 1191, 1819, 2138, 3011, 3420
BstXI CCANNNNNNTGG 1 cut(s) 1701
BstYI RGATCY 6 cut(s) 469, 1191, 1819, 2138, 3011, 3420
Bsu36I CCTNAGG 1 cut(s) 848
BsuI GTATCC 2 cut(s) 923, 1773
BsuRI GGCC 7 cut(s) 26, 1863, 1944, 2156, 2633, 3468, 3694
BtgI CCRYGG 1 cut(s) 2544
BtsCI GGATG 5 cut(s) 217, 446, 522, 1146, 1815
BtsI GCAGTG 3 cut(s) 2008, 2538, 3593
BtsIMutI CAGTG 8 cut(s) 111, 546, 685, 1660, 1757, 2008, 2538, 3593
BveI ACCTGC 1 cut(s) 1502
CaiI CAGNNNCTG 2 cut(s) 3264, 3298
CciI TCATGA 1 cut(s) 294
CfoI GCGC 5 cut(s) 454, 1375, 1527, 1529, 3455
Cfr10I RCCGGY 1 cut(s) 337
Cfr13I GGNCC 5 cut(s) 315, 712, 1320, 2500, 3693
CseI GACGC 4 cut(s) 641, 1235, 1343, 3144
Csp6I GTAC 5 cut(s) 788, 1114, 1431, 2248, 2349
CspAI ACCGGT 1 cut(s) 337
CviQI GTAC 5 cut(s) 788, 1114, 1431, 2248, 2349
DdeI CTNAG 8 cut(s) 455, 677, 848, 1464, 2337, 2400, 2642, 2909
DinI GGCGCC 1 cut(s) 3454
DraI TTTAAA 1 cut(s) 1248
DrdI GACNNNNNNGTC 1 cut(s) 290
DseDI GACNNNNNNGTC 1 cut(s) 290
EaeI YGGCCR 3 cut(s) 1861, 2154, 3466
Eam1104I CTCTTC 6 cut(s) 271, 887, 3378, 3486, 3555, 3619
EarI CTCTTC 6 cut(s) 271, 887, 3378, 3486, 3555, 3619
Eco130I CCWWGG 1 cut(s) 2544
Eco147I AGGCCT 2 cut(s) 26, 2633
Eco31I GGTCTC 2 cut(s) 1610, 3314
Eco47I GGWCC 4 cut(s) 315, 712, 1320, 2500
Eco47III AGCGCT 1 cut(s) 453
Eco57I CTGAAG 5 cut(s) 70, 1206, 1241, 1289, 1836
Eco72I CACGTG 1 cut(s) 73
Eco81I CCTNAGG 1 cut(s) 848
Eco88I CYCGRG 2 cut(s) 176, 2516
EcoNI CCTNNNNNAGG 1 cut(s) 719
EcoO109I RGGNCCY 3 cut(s) 315, 712, 2500
EcoRI GAATTC 2 cut(s) 2960, 3206
EcoRII CCWGG 4 cut(s) 582, 819, 2763, 2806
EcoT14I CCWWGG 1 cut(s) 2544
EcoT22I ATGCAT 1 cut(s) 1941
EgeI GGCGCC 1 cut(s) 3454
EheI GGCGCC 1 cut(s) 3454
ErhI CCWWGG 1 cut(s) 2544
Esp3I CGTCTC 2 cut(s) 3655, 3671
FalI AAGNNNNNCTT 4 cut(s) 1283, 1315, 1342, 1374
FaqI GGGAC 5 cut(s) 1198, 1579, 2660, 2907, 3117
FauI CCCGC 2 cut(s) 438, 1594
FbaI TGATCA 2 cut(s) 115, 2427
FblI GTMKAC 2 cut(s) 1549, 3628
Fnu4HI GCNGC 5 cut(s) 129, 450, 1275, 2405, 2620
FokI GGATG 5 cut(s) 224, 453, 509, 1133, 1822
Fsp4HI GCNGC 5 cut(s) 129, 450, 1275, 2405, 2620
FspBI CTAG 7 cut(s) 473, 557, 875, 1715, 2078, 2528, 2738
GlaI GCGC 5 cut(s) 453, 1374, 1526, 1528, 3454
GluI GCNGC 5 cut(s) 129, 450, 1275, 2405, 2620
GsaI CCCAGC 1 cut(s) 3402
GsuI CTGGAG 1 cut(s) 2489
HaeII RGCGCY 2 cut(s) 455, 3456
HaeIII GGCC 7 cut(s) 26, 1863, 1944, 2156, 2633, 3468, 3694
HapII CCGG 7 cut(s) 144, 338, 1920, 2051, 3036, 3144, 3517
HgaI GACGC 4 cut(s) 641, 1235, 1343, 3144
HhaI GCGC 5 cut(s) 454, 1375, 1527, 1529, 3455
Hin1I GRCGYC 4 cut(s) 351, 633, 1354, 3453
Hin6I GCGC 5 cut(s) 452, 1373, 1525, 1527, 3453
HinP1I GCGC 5 cut(s) 452, 1373, 1525, 1527, 3453
HindIII AAGCTT 3 cut(s) 203, 1963, 2570
HpaII CCGG 7 cut(s) 144, 338, 1920, 2051, 3036, 3144, 3517
HphI GGTGA 9 cut(s) 104, 110, 1643, 2001, 2747, 2984, 3202, 3313, 3695
Hpy166II GTNNAC 6 cut(s) 683, 1550, 1757, 2998, 3605, 3629
Hpy8I GTNNAC 6 cut(s) 683, 1550, 1757, 2998, 3605, 3629
Hpy99I CGWCG 6 cut(s) 353, 356, 427, 2037, 3362, 3452
HpyAV CCTTC 9 cut(s) 16, 661, 1264, 1510, 1990, 2491, 2699, 2777, 2913
HpyCH4IV ACGT 3 cut(s) 72, 351, 790
HpyF10VI GCNNNNNNNGC 5 cut(s) 451, 473, 2167, 2743, 3592
HpyF3I CTNAG 8 cut(s) 455, 677, 848, 1464, 2337, 2400, 2642, 2909
HpySE526I ACGT 3 cut(s) 72, 351, 790
Hsp92I GRCGYC 4 cut(s) 351, 633, 1354, 3453
HspAI GCGC 5 cut(s) 452, 1373, 1525, 1527, 3453
KasI GGCGCC 1 cut(s) 3452
Ksp22I TGATCA 2 cut(s) 115, 2427
LmnI GCTCC 3 cut(s) 1370, 2751, 3112
Lsp1109I GCAGC 4 cut(s) 461, 1261, 2391, 2631
LweI GCATC 3 cut(s) 202, 2463, 2499
MaeI CTAG 7 cut(s) 473, 557, 875, 1715, 2078, 2528, 2738
MaeII ACGT 3 cut(s) 72, 351, 790
MfeI CAATTG 1 cut(s) 3488
MflI RGATCY 6 cut(s) 469, 1191, 1819, 2138, 3011, 3420
MhlI GDGCHC 2 cut(s) 510, 570
MlsI TGGCCA 2 cut(s) 2156, 3468
MluNI TGGCCA 2 cut(s) 2156, 3468
Mly113I GGCGCC 1 cut(s) 3453
MlyI GAGTC 6 cut(s) 521, 824, 965, 1220, 2023, 2187
MmeI TCCRAC 4 cut(s) 383, 405, 2773, 3049
Mox20I TGGCCA 2 cut(s) 2156, 3468
Mph1103I ATGCAT 1 cut(s) 1941
MroXI GAANNNNTTC 1 cut(s) 3216
MscI TGGCCA 2 cut(s) 2156, 3468
MslI CAYNNNNRTG 3 cut(s) 1457, 1699, 2543
Msp20I TGGCCA 2 cut(s) 2156, 3468
MspA1I CMGCKG 2 cut(s) 926, 2622
MspCI CTTAAG 3 cut(s) 1348, 2294, 2660
MspI CCGG 7 cut(s) 144, 338, 1920, 2051, 3036, 3144, 3517
MspR9I CCNGG 5 cut(s) 584, 821, 2765, 2808, 3145
MunI CAATTG 1 cut(s) 3488
Mva1269I GAATGC 2 cut(s) 2235, 3283
MvaI CCWGG 4 cut(s) 584, 821, 2765, 2808
MvnI CGCG 2 cut(s) 128, 1527
MwoI GCNNNNNNNGC 5 cut(s) 451, 473, 2167, 2743, 3592
NarI GGCGCC 1 cut(s) 3453
NciI CCSGG 1 cut(s) 3145
NcoI CCATGG 1 cut(s) 2544
NlaIV GGNNCC 5 cut(s) 399, 759, 2140, 3454, 3668
NmeAIII GCCGAG 1 cut(s) 661
NmuCI GTSAC 6 cut(s) 92, 225, 1393, 1655, 1682, 2972
NsiI ATGCAT 1 cut(s) 1941
NspI RCATGY 3 cut(s) 1422, 1499, 3292
NspV TTCGAA 3 cut(s) 251, 1561, 3210
PaeI GCATGC 1 cut(s) 3292
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 294
PaqCI CACCTGC 1 cut(s) 1502
PauI GCGCGC 1 cut(s) 1525
PceI AGGCCT 2 cut(s) 26, 2633
PcsI WCGNNNNNNNCGW 3 cut(s) 183, 633, 2180
PctI GAATGC 2 cut(s) 2235, 3283
PdmI GAANNNNTTC 1 cut(s) 3216
PfeI GAWTC 8 cut(s) 544, 764, 1060, 2006, 2270, 2693, 3231, 3295
PflMI CCANNNNNTGG 2 cut(s) 3533, 3602
PfoI TCCNGGA 1 cut(s) 582
PinAI ACCGGT 1 cut(s) 337
PkrI GCNGC 5 cut(s) 130, 451, 1276, 2406, 2621
PleI GAGTC 6 cut(s) 520, 824, 965, 1219, 2023, 2187
PluTI GGCGCC 1 cut(s) 3456
PmaCI CACGTG 1 cut(s) 73
PmlI CACGTG 1 cut(s) 73
PpsI GAGTC 6 cut(s) 520, 824, 965, 1219, 2023, 2187
Ppu21I YACGTR 2 cut(s) 73, 791
PpuMI RGGWCCY 3 cut(s) 315, 712, 2500
PshAI GACNNNNGTC 1 cut(s) 578
PshBI ATTAAT 1 cut(s) 839
Psp5II RGGWCCY 3 cut(s) 315, 712, 2500
Psp6I CCWGG 4 cut(s) 582, 819, 2763, 2806
PspCI CACGTG 1 cut(s) 73
PspFI CCCAGC 1 cut(s) 3398
PspGI CCWGG 4 cut(s) 582, 819, 2763, 2806
PspN4I GGNNCC 5 cut(s) 399, 759, 2140, 3454, 3668
PspPI GGNCC 5 cut(s) 315, 712, 1320, 2500, 3693
PspPPI RGGWCCY 3 cut(s) 315, 712, 2500
PsrI GAACNNNNNNTAC 2 cut(s) 846, 878
PstI CTGCAG 1 cut(s) 3588
PstNI CAGNNNCTG 2 cut(s) 3264, 3298
PsuI RGATCY 6 cut(s) 469, 1191, 1819, 2138, 3011, 3420
PteI GCGCGC 1 cut(s) 1525
PvuII CAGCTG 1 cut(s) 926
RsaI GTAC 5 cut(s) 789, 1115, 1432, 2249, 2350
RsaNI GTAC 5 cut(s) 788, 1114, 1431, 2248, 2349
RseI CAYNNNNRTG 3 cut(s) 1457, 1699, 2543
SatI GCNGC 5 cut(s) 129, 450, 1275, 2405, 2620
Sau96I GGNCC 5 cut(s) 315, 712, 1320, 2500, 3693
SchI GAGTC 6 cut(s) 521, 824, 965, 1220, 2023, 2187
ScrFI CCNGG 5 cut(s) 584, 821, 2765, 2808, 3145
SduI GDGCHC 2 cut(s) 510, 570
SfaNI GCATC 3 cut(s) 202, 2463, 2499
SfcI CTRYAG 3 cut(s) 950, 2718, 3584
SfoI GGCGCC 1 cut(s) 3454
Sfr274I CTCGAG 1 cut(s) 176
SfuI TTCGAA 3 cut(s) 251, 1561, 3210
SinI GGWCC 4 cut(s) 315, 712, 1320, 2500
SlaI CTCGAG 1 cut(s) 176
SmiI ATTTAAAT 1 cut(s) 1248
SmiMI CAYNNNNRTG 3 cut(s) 1457, 1699, 2543
SphI GCATGC 1 cut(s) 3292
SseBI AGGCCT 2 cut(s) 26, 2633
SsiI CCGC 7 cut(s) 128, 445, 1601, 2170, 2622, 3221, 3380
SspDI GGCGCC 1 cut(s) 3452
SspI AATATT 3 cut(s) 1928, 2822, 3030
SspMI CTAG 7 cut(s) 473, 557, 875, 1715, 2078, 2528, 2738
StuI AGGCCT 2 cut(s) 26, 2633
StyD4I CCNGG 5 cut(s) 582, 819, 2763, 2806, 3143
StyI CCWWGG 1 cut(s) 2544
SwaI ATTTAAAT 1 cut(s) 1248
TaiI ACGT 3 cut(s) 75, 354, 793
TaqII GACCGA 1 cut(s) 590
TatI WGTACW 2 cut(s) 1113, 2348
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 8 cut(s) 544, 764, 1060, 2006, 2270, 2693, 3231, 3295
TscAI CASTG 8 cut(s) 118, 546, 685, 1660, 1764, 2008, 2545, 3593
TseFI GTSAC 6 cut(s) 92, 225, 1393, 1655, 1682, 2972
TseI GCWGC 4 cut(s) 449, 1274, 2404, 2619
Tsp45I GTSAC 6 cut(s) 92, 225, 1393, 1655, 1682, 2972
TspGWI ACGGA 1 cut(s) 3034
TspRI CASTG 8 cut(s) 118, 546, 685, 1660, 1764, 2008, 2545, 3593
Van91I CCANNNNNTGG 2 cut(s) 3533, 3602
Vha464I CTTAAG 3 cut(s) 1348, 2294, 2660
VpaK11BI GGWCC 4 cut(s) 315, 712, 1320, 2500
VspI ATTAAT 1 cut(s) 839
XagI CCTNNNNNAGG 1 cut(s) 719
XapI RAATTY 8 cut(s) 1203, 1243, 1778, 1915, 1979, 2017, 2960, 3206
XbaI TCTAGA 1 cut(s) 1714
XceI RCATGY 3 cut(s) 1422, 1499, 3292
XcmI CCANNNNNNNNNTGG 2 cut(s) 277, 2551
XhoI CTCGAG 1 cut(s) 176
XmiI GTMKAC 2 cut(s) 1549, 3628
XmnI GAANNNNTTC 1 cut(s) 3216
XspI CTAG 7 cut(s) 473, 557, 875, 1715, 2078, 2528, 2738
ZraI GACGTC 1 cut(s) 352
Zsp2I ATGCAT 1 cut(s) 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.