disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 37 - 102 | 2.7e-15 | Rx N-terminal domain |
| NB-ARC | PF00931 | 175 - 348 | 4.3e-41 | NB-ARC domain |
| WHD_DRP | PF23559 | 431 - 465 | 1.4e-08 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 463 - 524 | 4e-07 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 512 - 634 | 1.1e-32 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 354 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2266 |
| AatII | GACGTC | 2 cut(s) | 198, 2420 |
| Acc36I | ACCTGC | 3 cut(s) | 1729, 1879, 2100 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1859 |
| AccI | GTMKAC | 3 cut(s) | 877, 1474, 2252 |
| AccII | CGCG | 1 cut(s) | 277 |
| AccIII | TCCGGA | 1 cut(s) | 65 |
| AciI | CCGC | 4 cut(s) | 495, 609, 1724, 1761 |
| AclWI | GGATC | 2 cut(s) | 1206, 2203 |
| AcsI | RAATTY | 6 cut(s) | 778, 882, 1572, 1729, 2291, 2450 |
| AcuI | CTGAAG | 4 cut(s) | 146, 288, 1643, 2258 |
| AcyI | GRCGYC | 2 cut(s) | 195, 2417 |
| AfaI | GTAC | 2 cut(s) | 1934, 2132 |
| AflII | CTTAAG | 2 cut(s) | 1141, 2048 |
| AflIII | ACRYGT | 1 cut(s) | 940 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1009 |
| AjiI | CACGTC | 1 cut(s) | 941 |
| AjnI | CCWGG | 3 cut(s) | 39, 114, 309 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 119, 151, 429, 461, 1163, 1195 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2168, 2200 |
| Alw21I | GWGCWC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| Alw26I | GTCTC | 6 cut(s) | 1142, 1782, 1826, 2082, 2237, 2252 |
| Alw44I | GTGCAC | 2 cut(s) | 956, 1053 |
| AlwI | GGATC | 2 cut(s) | 1206, 2203 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 46, 1830 |
| Ama87I | CYCGRG | 1 cut(s) | 2227 |
| Aor13HI | TCCGGA | 1 cut(s) | 65 |
| AoxI | GGCC | 2 cut(s) | 237, 2160 |
| ApaLI | GTGCAC | 2 cut(s) | 956, 1053 |
| ApeKI | GCWGC | 5 cut(s) | 550, 947, 1118, 2005, 2263 |
| ApoI | RAATTY | 6 cut(s) | 778, 882, 1572, 1729, 2291, 2450 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1295, 1327 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1573, 1713 |
| AspLEI | GCGC | 1 cut(s) | 2320 |
| AspS9I | GGNCC | 2 cut(s) | 730, 2160 |
| AsuC2I | CCSGG | 4 cut(s) | 89, 1050, 2228, 2229 |
| AsuHPI | GGTGA | 5 cut(s) | 151, 733, 1747, 1937, 2036 |
| AvaI | CYCGRG | 1 cut(s) | 2227 |
| AvaII | GGWCC | 1 cut(s) | 730 |
| BaeGI | GKGCMC | 2 cut(s) | 960, 1057 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 255, 288 |
| BanII | GRGCYC | 2 cut(s) | 219, 1887 |
| BbsI | GAAGAC | 4 cut(s) | 103, 1008, 1211, 2336 |
| Bbv12I | GWGCWC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| BbvCI | CCTCAGC | 2 cut(s) | 1544, 2057 |
| BbvI | GCAGC | 5 cut(s) | 537, 959, 1105, 2017, 2250 |
| BccI | CCATC | 4 cut(s) | 44, 512, 959, 1754 |
| BceAI | ACGGC | 2 cut(s) | 2234, 2251 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 41, 75 |
| BciT130I | CCWGG | 3 cut(s) | 41, 116, 311 |
| BcnI | CCSGG | 4 cut(s) | 89, 1050, 2228, 2229 |
| BcoDI | GTCTC | 6 cut(s) | 1142, 1782, 1826, 2082, 2237, 2252 |
| BfaI | CTAG | 6 cut(s) | 1115, 1130, 1154, 1970, 2010, 2246 |
| BfmI | CTRYAG | 2 cut(s) | 585, 594 |
| BfrI | CTTAAG | 2 cut(s) | 1141, 2048 |
| BfuAI | ACCTGC | 3 cut(s) | 1729, 1879, 2100 |
| BglII | AGATCT | 2 cut(s) | 541, 1636 |
| BisI | GCNGC | 5 cut(s) | 551, 948, 1119, 2006, 2264 |
| BlsI | GCNGC | 5 cut(s) | 552, 949, 1120, 2007, 2265 |
| Bme1390I | CCNGG | 7 cut(s) | 41, 89, 116, 311, 1050, 2228, 2229 |
| Bme18I | GGWCC | 1 cut(s) | 730 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1009 |
| BmeT110I | CYCGRG | 1 cut(s) | 2227 |
| BmgBI | CACGTC | 1 cut(s) | 941 |
| BmgT120I | GGNCC | 2 cut(s) | 730, 2160 |
| BmiI | GGNNCC | 1 cut(s) | 34 |
| BmrFI | CCNGG | 7 cut(s) | 41, 89, 116, 311, 1050, 2228, 2229 |
| BmrI | ACTGGG | 2 cut(s) | 877, 1533 |
| BmsI | GCATC | 7 cut(s) | 1262, 1446, 1603, 1806, 1974, 2213, 2316 |
| BmuI | ACTGGG | 2 cut(s) | 877, 1533 |
| BpiI | GAAGAC | 4 cut(s) | 103, 1008, 1211, 2336 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1544, 2057 |
| BpuMI | CCSGG | 4 cut(s) | 89, 1050, 2228, 2229 |
| Bsa29I | ATCGAT | 1 cut(s) | 261 |
| BsaAI | YACGTR | 2 cut(s) | 894, 1891 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1188 |
| BsaHI | GRCGYC | 2 cut(s) | 195, 2417 |
| BsaI | GGTCTC | 3 cut(s) | 1142, 2082, 2237 |
| BsaJI | CCNNGG | 5 cut(s) | 240, 309, 1048, 1561, 2227 |
| BsaWI | WCCGGW | 2 cut(s) | 29, 65 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 441, 471, 925, 955, 2045, 2075 |
| Bse118I | RCCGGY | 1 cut(s) | 1459 |
| Bse1I | ACTGG | 5 cut(s) | 872, 1023, 1528, 1856, 2163 |
| Bse3DI | GCAATG | 3 cut(s) | 460, 1389, 1533 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1188 |
| BseAI | TCCGGA | 1 cut(s) | 65 |
| BseBI | CCWGG | 3 cut(s) | 41, 116, 311 |
| BseCI | ATCGAT | 1 cut(s) | 261 |
| BseDI | CCNNGG | 5 cut(s) | 240, 309, 1048, 1561, 2227 |
| BseGI | GGATG | 7 cut(s) | 36, 259, 523, 844, 1003, 1057, 1905 |
| BseJI | GATNNNNATC | 1 cut(s) | 1188 |
| BseMI | GCAATG | 3 cut(s) | 460, 1389, 1533 |
| BseMII | CTCAG | 6 cut(s) | 800, 1535, 1837, 2048, 2072, 2388 |
| BseNI | ACTGG | 5 cut(s) | 872, 1023, 1528, 1856, 2163 |
| BseRI | GAGGAG | 3 cut(s) | 185, 1403, 2100 |
| BseSI | GKGCMC | 2 cut(s) | 960, 1057 |
| BseXI | GCAGC | 5 cut(s) | 537, 959, 1105, 2017, 2250 |
| BsgI | GTGCAG | 1 cut(s) | 171 |
| Bsh1236I | CGCG | 1 cut(s) | 277 |
| BshFI | GGCC | 2 cut(s) | 239, 2162 |
| BshVI | ATCGAT | 1 cut(s) | 261 |
| BsiHKAI | GWGCWC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2227 |
| BsiSI | CCGG | 7 cut(s) | 30, 66, 88, 1050, 1256, 1460, 2228 |
| BslFI | GGGAC | 1 cut(s) | 575 |
| BsmAI | GTCTC | 6 cut(s) | 1142, 1782, 1826, 2082, 2237, 2252 |
| BsmBI | CGTCTC | 2 cut(s) | 1826, 2252 |
| BsmFI | GGGAC | 1 cut(s) | 575 |
| BsnI | GGCC | 2 cut(s) | 239, 2162 |
| Bso31I | GGTCTC | 3 cut(s) | 1142, 2082, 2237 |
| BsoBI | CYCGRG | 1 cut(s) | 2227 |
| Bsp1286I | GDGCHC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| Bsp13I | TCCGGA | 1 cut(s) | 65 |
| Bsp1407I | TGTACA | 1 cut(s) | 2130 |
| Bsp143I | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| BspACI | CCGC | 4 cut(s) | 495, 609, 1724, 1761 |
| BspANI | GGCC | 2 cut(s) | 239, 2162 |
| BspCNI | CTCAG | 6 cut(s) | 801, 1536, 1836, 2049, 2073, 2387 |
| BspDI | ATCGAT | 1 cut(s) | 261 |
| BspEI | TCCGGA | 1 cut(s) | 65 |
| BspFNI | CGCG | 1 cut(s) | 277 |
| BspLI | GGNNCC | 1 cut(s) | 34 |
| BspMI | ACCTGC | 3 cut(s) | 1729, 1879, 2100 |
| BspPI | GGATC | 2 cut(s) | 1206, 2203 |
| BspTI | CTTAAG | 2 cut(s) | 1141, 2048 |
| BspTNI | GGTCTC | 3 cut(s) | 1142, 2082, 2237 |
| BsrDI | GCAATG | 3 cut(s) | 460, 1389, 1533 |
| BsrFI | RCCGGY | 1 cut(s) | 1459 |
| BsrGI | TGTACA | 1 cut(s) | 2130 |
| BsrI | ACTGG | 5 cut(s) | 872, 1023, 1528, 1856, 2163 |
| BssAI | RCCGGY | 1 cut(s) | 1459 |
| BssECI | CCNNGG | 5 cut(s) | 240, 309, 1048, 1561, 2227 |
| BssMI | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| BssNI | GRCGYC | 2 cut(s) | 195, 2417 |
| BssT1I | CCWWGG | 1 cut(s) | 1561 |
| Bst2UI | CCWGG | 3 cut(s) | 41, 116, 311 |
| Bst4CI | ACNGT | 4 cut(s) | 705, 1007, 1106, 1832 |
| BstACI | GRCGYC | 2 cut(s) | 195, 2417 |
| BstAFI | CTTAAG | 2 cut(s) | 1141, 2048 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2326 |
| BstAUI | TGTACA | 1 cut(s) | 2130 |
| BstBAI | YACGTR | 2 cut(s) | 894, 1891 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 511, 737 |
| BstF5I | GGATG | 7 cut(s) | 36, 259, 523, 844, 1003, 1057, 1905 |
| BstFNI | CGCG | 1 cut(s) | 277 |
| BstHHI | GCGC | 1 cut(s) | 2320 |
| BstKTI | GATC | 6 cut(s) | 261, 295, 544, 1201, 1639, 2198 |
| BstMAI | GTCTC | 6 cut(s) | 1142, 1782, 1826, 2082, 2237, 2252 |
| BstMBI | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 214, 1613, 2269, 2278, 2326, 2410 |
| BstNI | CCWGG | 3 cut(s) | 41, 116, 311 |
| BstNSI | RCATGY | 3 cut(s) | 227, 1031, 1095 |
| BstSCI | CCNGG | 7 cut(s) | 39, 87, 114, 309, 1048, 2226, 2227 |
| BstSFI | CTRYAG | 2 cut(s) | 585, 594 |
| BstSLI | GKGCMC | 2 cut(s) | 960, 1057 |
| BstSNI | TACGTA | 1 cut(s) | 1891 |
| BstUI | CGCG | 1 cut(s) | 277 |
| BstV1I | GCAGC | 5 cut(s) | 537, 959, 1105, 2017, 2250 |
| BstV2I | GAAGAC | 4 cut(s) | 103, 1008, 1211, 2336 |
| BstX2I | RGATCY | 4 cut(s) | 541, 1198, 1636, 2195 |
| BstYI | RGATCY | 4 cut(s) | 541, 1198, 1636, 2195 |
| Bsu15I | ATCGAT | 1 cut(s) | 261 |
| BsuRI | GGCC | 2 cut(s) | 239, 2162 |
| BsuTUI | ATCGAT | 1 cut(s) | 261 |
| BtgZI | GCGATG | 1 cut(s) | 2236 |
| BtrI | CACGTC | 1 cut(s) | 941 |
| BtsCI | GGATG | 7 cut(s) | 36, 259, 523, 844, 1003, 1057, 1905 |
| BtsI | GCAGTG | 2 cut(s) | 159, 1847 |
| BtsIMutI | CAGTG | 4 cut(s) | 122, 159, 1493, 1847 |
| BveI | ACCTGC | 3 cut(s) | 1729, 1879, 2100 |
| CaiI | CAGNNNCTG | 2 cut(s) | 46, 1830 |
| CfoI | GCGC | 1 cut(s) | 2320 |
| Cfr10I | RCCGGY | 1 cut(s) | 1459 |
| Cfr13I | GGNCC | 2 cut(s) | 730, 2160 |
| Cfr9I | CCCGGG | 1 cut(s) | 2227 |
| ClaI | ATCGAT | 1 cut(s) | 261 |
| CseI | GACGC | 6 cut(s) | 173, 266, 863, 1409, 1808, 2269 |
| Csp6I | GTAC | 2 cut(s) | 1933, 2131 |
| CviAII | CATG | 8 cut(s) | 224, 361, 680, 1028, 1092, 1399, 1659, 2150 |
| CviQI | GTAC | 2 cut(s) | 1933, 2131 |
| DpnI | GATC | 6 cut(s) | 260, 294, 543, 1200, 1638, 2197 |
| DpnII | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| DraI | TTTAAA | 1 cut(s) | 984 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2266 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1009 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2266 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1009 |
| EciI | GGCGGA | 2 cut(s) | 510, 1776 |
| Ecl136II | GAGCTC | 2 cut(s) | 217, 1885 |
| Eco105I | TACGTA | 1 cut(s) | 1891 |
| Eco130I | CCWWGG | 1 cut(s) | 1561 |
| Eco24I | GRGCYC | 2 cut(s) | 219, 1887 |
| Eco31I | GGTCTC | 3 cut(s) | 1142, 2082, 2237 |
| Eco32I | GATATC | 2 cut(s) | 421, 1432 |
| Eco47I | GGWCC | 1 cut(s) | 730 |
| Eco53kI | GAGCTC | 2 cut(s) | 217, 1885 |
| Eco57I | CTGAAG | 4 cut(s) | 146, 288, 1643, 2258 |
| Eco88I | CYCGRG | 1 cut(s) | 2227 |
| EcoICRI | GAGCTC | 2 cut(s) | 217, 1885 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 511, 737 |
| EcoO109I | RGGNCCY | 1 cut(s) | 730 |
| EcoRI | GAATTC | 2 cut(s) | 778, 882 |
| EcoRII | CCWGG | 3 cut(s) | 39, 114, 309 |
| EcoRV | GATATC | 2 cut(s) | 421, 1432 |
| EcoT14I | CCWWGG | 1 cut(s) | 1561 |
| EcoT22I | ATGCAT | 1 cut(s) | 1033 |
| EcoT38I | GRGCYC | 2 cut(s) | 219, 1887 |
| ErhI | CCWWGG | 1 cut(s) | 1561 |
| Esp3I | CGTCTC | 2 cut(s) | 1826, 2252 |
| FaeI | CATG | 8 cut(s) | 227, 364, 683, 1031, 1095, 1402, 1662, 2153 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2341, 2373 |
| FaqI | GGGAC | 1 cut(s) | 575 |
| FatI | CATG | 8 cut(s) | 223, 360, 679, 1027, 1091, 1398, 1658, 2149 |
| FauI | CCCGC | 1 cut(s) | 602 |
| FauNDI | CATATG | 1 cut(s) | 1467 |
| FblI | GTMKAC | 3 cut(s) | 877, 1474, 2252 |
| Fnu4HI | GCNGC | 5 cut(s) | 551, 948, 1119, 2006, 2264 |
| FokI | GGATG | 7 cut(s) | 23, 266, 530, 851, 1010, 1044, 1912 |
| FriOI | GRGCYC | 2 cut(s) | 219, 1887 |
| Fsp4HI | GCNGC | 5 cut(s) | 551, 948, 1119, 2006, 2264 |
| FspBI | CTAG | 6 cut(s) | 1115, 1130, 1154, 1970, 2010, 2246 |
| GlaI | GCGC | 1 cut(s) | 2319 |
| GluI | GCNGC | 5 cut(s) | 551, 948, 1119, 2006, 2264 |
| HaeIII | GGCC | 2 cut(s) | 239, 2162 |
| HapII | CCGG | 7 cut(s) | 30, 66, 88, 1050, 1256, 1460, 2228 |
| HgaI | GACGC | 6 cut(s) | 173, 266, 863, 1409, 1808, 2269 |
| HhaI | GCGC | 1 cut(s) | 2320 |
| Hin1I | GRCGYC | 2 cut(s) | 195, 2417 |
| Hin1II | CATG | 8 cut(s) | 227, 364, 683, 1031, 1095, 1402, 1662, 2153 |
| Hin6I | GCGC | 1 cut(s) | 2318 |
| HinP1I | GCGC | 1 cut(s) | 2318 |
| HincII | GTYRAC | 3 cut(s) | 187, 1396, 2253 |
| HindII | GTYRAC | 3 cut(s) | 187, 1396, 2253 |
| HindIII | AAGCTT | 1 cut(s) | 2279 |
| HpaII | CCGG | 7 cut(s) | 30, 66, 88, 1050, 1256, 1460, 2228 |
| HphI | GGTGA | 5 cut(s) | 151, 733, 1747, 1937, 2036 |
| Hpy188I | TCNGA | 8 cut(s) | 297, 559, 700, 997, 1878, 2076, 2277, 2474 |
| Hpy99I | CGWCG | 6 cut(s) | 167, 197, 200, 282, 2257, 2272 |
| HpyAV | CCTTC | 5 cut(s) | 1236, 1343, 1618, 1807, 2118 |
| HpyCH4III | ACNGT | 4 cut(s) | 705, 1007, 1106, 1832 |
| HpyCH4IV | ACGT | 5 cut(s) | 195, 893, 940, 1890, 2417 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 214, 1613, 2269, 2278, 2326, 2410 |
| HpySE526I | ACGT | 5 cut(s) | 195, 893, 940, 1890, 2417 |
| Hsp92I | GRCGYC | 2 cut(s) | 195, 2417 |
| Hsp92II | CATG | 8 cut(s) | 227, 364, 683, 1031, 1095, 1402, 1662, 2153 |
| HspAI | GCGC | 1 cut(s) | 2318 |
| Kpn2I | TCCGGA | 1 cut(s) | 65 |
| Kzo9I | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| LmnI | GCTCC | 3 cut(s) | 871, 933, 2053 |
| Lsp1109I | GCAGC | 5 cut(s) | 537, 959, 1105, 2017, 2250 |
| LweI | GCATC | 7 cut(s) | 1262, 1446, 1603, 1806, 1974, 2213, 2316 |
| MaeI | CTAG | 6 cut(s) | 1115, 1130, 1154, 1970, 2010, 2246 |
| MaeII | ACGT | 5 cut(s) | 195, 893, 940, 1890, 2417 |
| MaeIII | GTNAC | 6 cut(s) | 761, 922, 1014, 1241, 2241, 2418 |
| MalI | GATC | 6 cut(s) | 260, 294, 543, 1200, 1638, 2197 |
| MboI | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| MfeI | CAATTG | 1 cut(s) | 2134 |
| MflI | RGATCY | 4 cut(s) | 541, 1198, 1636, 2195 |
| MhlI | GDGCHC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| MlyI | GAGTC | 3 cut(s) | 93, 1784, 2258 |
| MmeI | TCCRAC | 4 cut(s) | 375, 427, 975, 1827 |
| Mph1103I | ATGCAT | 1 cut(s) | 1033 |
| MroI | TCCGGA | 1 cut(s) | 65 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1573, 1713 |
| MslI | CAYNNNNRTG | 3 cut(s) | 41, 1096, 1954 |
| MspA1I | CMGCKG | 1 cut(s) | 2462 |
| MspCI | CTTAAG | 2 cut(s) | 1141, 2048 |
| MspI | CCGG | 7 cut(s) | 30, 66, 88, 1050, 1256, 1460, 2228 |
| MspR9I | CCNGG | 7 cut(s) | 41, 89, 116, 311, 1050, 2228, 2229 |
| MunI | CAATTG | 1 cut(s) | 2134 |
| MvaI | CCWGG | 3 cut(s) | 41, 116, 311 |
| MvnI | CGCG | 1 cut(s) | 277 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 214, 1613, 2269, 2278, 2326, 2410 |
| NciI | CCSGG | 4 cut(s) | 89, 1050, 2228, 2229 |
| NdeI | CATATG | 1 cut(s) | 1467 |
| NdeII | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| NlaIII | CATG | 8 cut(s) | 227, 364, 683, 1031, 1095, 1402, 1662, 2153 |
| NlaIV | GGNNCC | 1 cut(s) | 34 |
| NmeAIII | GCCGAG | 1 cut(s) | 265 |
| NmuCI | GTSAC | 2 cut(s) | 761, 2418 |
| NsiI | ATGCAT | 1 cut(s) | 1033 |
| NspI | RCATGY | 3 cut(s) | 227, 1031, 1095 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1573, 1713 |
| PfeI | GAWTC | 8 cut(s) | 142, 1171, 1411, 1585, 1682, 1764, 2183, 2467 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1859 |
| PfoI | TCCNGGA | 1 cut(s) | 114 |
| PkrI | GCNGC | 5 cut(s) | 552, 949, 1120, 2007, 2265 |
| PleI | GAGTC | 3 cut(s) | 93, 1784, 2257 |
| PpsI | GAGTC | 3 cut(s) | 93, 1784, 2257 |
| Ppu21I | YACGTR | 2 cut(s) | 894, 1891 |
| PpuMI | RGGWCCY | 1 cut(s) | 730 |
| PsiI | TTATAA | 1 cut(s) | 354 |
| Psp124BI | GAGCTC | 2 cut(s) | 219, 1887 |
| Psp5II | RGGWCCY | 1 cut(s) | 730 |
| Psp6I | CCWGG | 3 cut(s) | 39, 114, 309 |
| PspGI | CCWGG | 3 cut(s) | 39, 114, 309 |
| PspN4I | GGNNCC | 1 cut(s) | 34 |
| PspPI | GGNCC | 2 cut(s) | 730, 2160 |
| PspPPI | RGGWCCY | 1 cut(s) | 730 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1828, 1860 |
| PstNI | CAGNNNCTG | 2 cut(s) | 46, 1830 |
| PsuI | RGATCY | 4 cut(s) | 541, 1198, 1636, 2195 |
| PvuII | CAGCTG | 1 cut(s) | 2462 |
| RsaI | GTAC | 2 cut(s) | 1934, 2132 |
| RsaNI | GTAC | 2 cut(s) | 1933, 2131 |
| RseI | CAYNNNNRTG | 3 cut(s) | 41, 1096, 1954 |
| SacI | GAGCTC | 2 cut(s) | 219, 1887 |
| SalI | GTCGAC | 1 cut(s) | 2251 |
| SatI | GCNGC | 5 cut(s) | 551, 948, 1119, 2006, 2264 |
| Sau3AI | GATC | 6 cut(s) | 258, 292, 541, 1198, 1636, 2195 |
| Sau96I | GGNCC | 2 cut(s) | 730, 2160 |
| SchI | GAGTC | 3 cut(s) | 93, 1784, 2258 |
| ScrFI | CCNGG | 7 cut(s) | 41, 89, 116, 311, 1050, 2228, 2229 |
| SduI | GDGCHC | 6 cut(s) | 159, 219, 960, 1057, 1707, 1887 |
| SfaNI | GCATC | 7 cut(s) | 1262, 1446, 1603, 1806, 1974, 2213, 2316 |
| SfcI | CTRYAG | 2 cut(s) | 585, 594 |
| SinI | GGWCC | 1 cut(s) | 730 |
| SmaI | CCCGGG | 1 cut(s) | 2229 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 41, 1096, 1954 |
| SmlI | CTYRAG | 2 cut(s) | 1141, 2048 |
| SmoI | CTYRAG | 2 cut(s) | 1141, 2048 |
| SnaBI | TACGTA | 1 cut(s) | 1891 |
| SsiI | CCGC | 4 cut(s) | 495, 609, 1724, 1761 |
| SspMI | CTAG | 6 cut(s) | 1115, 1130, 1154, 1970, 2010, 2246 |
| SstI | GAGCTC | 2 cut(s) | 219, 1887 |
| StyD4I | CCNGG | 7 cut(s) | 39, 87, 114, 309, 1048, 2226, 2227 |
| StyI | CCWWGG | 1 cut(s) | 1561 |
| TaaI | ACNGT | 4 cut(s) | 705, 1007, 1106, 1832 |
| TaiI | ACGT | 5 cut(s) | 198, 896, 943, 1893, 2420 |
| TaqI | TCGA | 5 cut(s) | 102, 234, 261, 1707, 2252 |
| TatI | WGTACW | 1 cut(s) | 2130 |
| TfiI | GAWTC | 8 cut(s) | 142, 1171, 1411, 1585, 1682, 1764, 2183, 2467 |
| TscAI | CASTG | 4 cut(s) | 129, 159, 1500, 1854 |
| TseFI | GTSAC | 2 cut(s) | 761, 2418 |
| TseI | GCWGC | 5 cut(s) | 550, 947, 1118, 2005, 2263 |
| Tsp45I | GTSAC | 2 cut(s) | 761, 2418 |
| TspGWI | ACGGA | 5 cut(s) | 137, 416, 1675, 2270, 2414 |
| TspMI | CCCGGG | 1 cut(s) | 2227 |
| TspRI | CASTG | 4 cut(s) | 129, 159, 1500, 1854 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1859 |
| Vha464I | CTTAAG | 2 cut(s) | 1141, 2048 |
| VneI | GTGCAC | 2 cut(s) | 956, 1053 |
| VpaK11BI | GGWCC | 1 cut(s) | 730 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 511, 737 |
| XapI | RAATTY | 6 cut(s) | 778, 882, 1572, 1729, 2291, 2450 |
| XceI | RCATGY | 3 cut(s) | 227, 1031, 1095 |
| XmaI | CCCGGG | 1 cut(s) | 2227 |
| XmiI | GTMKAC | 3 cut(s) | 877, 1474, 2252 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1573, 1713 |
| XspI | CTAG | 6 cut(s) | 1115, 1130, 1154, 1970, 2010, 2246 |
| ZraI | GACGTC | 2 cut(s) | 196, 2418 |
| Zsp2I | ATGCAT | 1 cut(s) | 1033 |