Rw5G027740

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
41265315 .. 41268560
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G027740.1

Sequence Viewer

Length: 3174 bp
ATGGCTCTGGAAATTGTGGGTGGTGCTTTTCTCTCTTCTGCTCTTGGTGTTCTGTTTGATAGGATGGCTTCCCGTCCGGTTGTTGACTTCATCCGAGGAAAGAAGATCACCGCTGGGCTGCTCCGTAAGTTGAAGATTAAGTTGTTGTTGGTTAATAAGTTGCTCGATGATGCAGAGGAGAAGCAACTCAGAAACTCTAGAGTCAGGGAATGGCTTGATGAGCTTAAAGATGTTCTCTATCATGCAGACGACCTGTTGGATGAGATAAAGACTGAAGCTCTGCGTTGCAAGATGGAACAAGAAGATTCTGGAAGCAACAGCACAAATCAGGTACTCAAGTTTAGTTCTATTTCCATTCAAGAACTTGACAAAAGTCTGGAACCCAGGATACTGGACGTTCTTGACAGATTAGAACTTATTGTCAACGAAAAAGATGTGCTTGATTTGAAAGAGGGTGTTCAGAATAGACCACAAGCAAGACTGCCTACAACTTCTTTGGTAGAAGAGTCTAGTGTATATGGAAGGGATGAAGAAAAGGAGGCCATTATCAAGTTATTGTTAGCGGATGGTATGACTGGAAATAAGAAAGATGTGCTTCCAATTGTGGGCATGGGTGGGGTTGGAAAGACCACCCTTGCTCAACTCGTATACAACGATGACAGAGTCAAGCAACATTTTGACCATCAATCATGGTCCTGTGTTTCAGAAGAATTTGATGTTATCAAAATAACACAGACAATTTATGGGGCAGTCACTTCACAAACTTGTAATATCACAGATTTAGACATGCTTCAAGTTAAACTAAAGCAGACGTTGTCAGGGAAGAAATTTCTCTTTGTTCTTGATGATGTTTGGAATGTGAATTTAATGAAGTGGGATCTCTTGAGTCGACCCTTTGAGAGTGGAGGTCATGGAATGCAACTATCTGAGGAAAACTGCTGGTTGTTGTTCTCAAAACATGCCTTCAAAAATGCAGGTGTTACTGCAGATCCTTCGCATGAAGTGATTGGAAAACAGATTGCTCAAAAGTGTAAAGGACTCCCTTTAGCTGCAAAATCACTTGGGGGTCTTTTATGTTCTGAACCAAATATTGAGAAATGGGAAGAAATATTGAACAACGACATATGGGAGTTGCGAGATAAAGAGAACGACATTTTGCCAGCTCTATGGTTGAGCTACCATTATCTACCTCCACATCTGAAGCGTTGTTTTGCTTACTGTTCCATATTTCCTCAAGATCATAAGTTTAACAAACCAGATCTGGTTTTACTGTGGATGGCTGAAGATCTCTTATCGTCAAAATCGAAGACTACAATTGAAGAAGTTGGAGATAACTACTTTGATGATCTAGTGTCAAGGTCATTTTTCCAACGTGTACCAGATCATTTTTCTGGTAAGCCAATTTTCACAATGCATGACCTTATCCATGACTTAGCAAACTTTGTCTCCGGAGAGTTTTGTGTTAGGTTGGAGGACAATGACCCAGTACTGGAAAATGCCGGCAACAGTCGCCACTTTTCATGTGTAACCGGCAGTTTTGATCAATGGGACAGTTTGTATGAAGCCAAGTATTTGAGGACCTTTCTAGTGGTATCAGATTACATAAACCGTCCCAACTTAGATTTTGATATATTCCTGAAGCTTCAGTGTTTAAGAATGCTCAATTTGTCAGGGTACAGGATTGGTGAGCTGCCTAGTTCAATTAGCAAGTTGAAGCATCTAAGGCACTTGGACTTGTCTGACACATCAATTAAGAAGTTACCTGATGAAATATGTACTTTATATAATTTGCAAACGTTATTGTTGTCGTATTGTTATTCTCTAGTTGAGTTGCCAACTGATTTTGGAAGATTAATCAACCTGCGTCATCTTGATATCAGATACACACAGATAGAAAAGATGCCACCAAAGATGGGCAAAATGAAAGATCTCCAAACATTAAGAGGTAAGTTTGTCCTAGACAAATACACTGGTGATAACATTGTCGAGATTAAAGTGCTTCAGCAGTTGCGCGGAACGCTTTGTATATCTGGGCTTCGCCATATTGTGCATGCCACGGATGCCTTGGAGACCGATATGAGAAAGAAGAAGCATCTGGATGAATTAGTTTTGGAATGGGGAGGCAAGTCTGGTGACACCGACGATACACAAAAAGAGAGAGATGTGCTGGAGAACCTCCAACCTCATACAAACCTAAAAGAACTCACGATTCGATCTTACGGGGGCACAAGATTTCCAGGTTGGTTGGAAGATCATTCTCGTTTATCTAATCTGGTTCGTCTTCAACTTCTGGATTGTGGAAATTGTTGGTTGTTGGCATCAGTTGAGCAGCTACCCTCCCTACAAGAGCTTGAGATTGAAGGATTTAATGGAGTGGTGAATGTGGGTTCCAAGCCTTTTCCGAATCTTCGTAAGCTTAGTCTGAGGTCCTGTCCCAAGGTAACCCGGACCTTCATTTTAGCCTGCTTCCCAAAGCTTGAAAGCCTCGAATTGAAGGATGTTAATGTAGAATCTCTTAGTTCCTCTACACTCCTCTCCCTTGTCAAACTTTCAATAGCTTCATGCCCAAATTTTGTTTGTTTTCCCGATGGAGGGCTGAATGCGCCGAACTTGGAGACCATAGCAGTCCATACCTGTCTGAAACTGAGGTCATTGCCGCAACACATGCACAACCTTCTCCCATCTCTCAGGCGCTTGTTCGTATATTGTCCAGAATTGGAATCATTTCCCGAAGGGAGATTGCCGTCTAAGTTGGAATACCTGGGCATCTGGCGTTGCAAGAAACTCCTCATTGGAAACCCCCGTATGCAGTGGGGTCTACGAACACTCACCTCTCTCAAATTCTTGAGCGTCGGCTTTGAGGAATGTGAACAAGTTGTGGATTCATTTCCAGACGAGGGGCTGCTGCCCACCACTATCTCACGACTCGAGATCTACTGTATTTCGAAGCTGGACGGCAAGGGGTTTAGACAACTCACCTCTCTTAAAGAGATGGAAATTGGCAATTGCCCTGAACTCCGGTGCTTGCCAGATGAAGGGCTACCCACTTCTCTTTCTGATCTGAACATCTATGATTGTCCTTTACTAGAACAACGTTGCCAGAGAGAGACGGGGGAAGATTGGCCCAAGATTGCTCACATCAAGACCATTCGAATCAATAACAAAGAAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1057

Amino Acids

120.36

Weight (kDa)

5.86

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 102 8.7e-18 Rx N-terminal domain
NB-ARC PF00931 177 - 307 1.8e-24 NB-ARC domain
WHD_DRP PF23559 409 - 479 3.5e-25 Disease resistance protein Winged helix domain
LRR_14 PF23598 546 - 841 2.4e-31 Leucine-rich repeat region
LRR_8 PF13855 551 - 605 5.7e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 661 - 788 1.7e-37 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 965
Acc36I ACCTGC 2 cut(s) 965, 1869
AccI GTMKAC 3 cut(s) 648, 889, 2818
AccII CGCG 1 cut(s) 2013
AccIII TCCGGA 1 cut(s) 1448
AciI CCGC 4 cut(s) 111, 563, 2013, 2657
AclI AACGTT 2 cut(s) 1796, 3094
AclWI GGATC 2 cut(s) 885, 983
AcsI RAATTY 5 cut(s) 710, 827, 862, 2569, 2840
AcuI CTGAAG 6 cut(s) 294, 1220, 1302, 1628, 1658, 1985
AfaI GTAC 5 cut(s) 333, 1377, 1488, 1676, 1777
AfiI CCNNNNNNNGG 7 cut(s) 605, 1489, 1913, 2591, 2592, 2897, 3035
AflIII ACRYGT 1 cut(s) 1372
AjnI CCWGG 3 cut(s) 383, 2236, 2760
Alw26I GTCTC 4 cut(s) 1450, 2063, 2609, 3101
AlwI GGATC 2 cut(s) 885, 983
Ama87I CYCGRG 1 cut(s) 2927
Aor13HI TCCGGA 1 cut(s) 1448
AoxI GGCC 2 cut(s) 540, 3122
ApeKI GCWGC 6 cut(s) 118, 1049, 1690, 2329, 2902, 2905
ApoI RAATTY 5 cut(s) 710, 827, 862, 2569, 2840
AseI ATTAAT 1 cut(s) 1853
Asp700I GAANNNNTTC 1 cut(s) 2724
AspLEI GCGC 3 cut(s) 2013, 2605, 2694
AspS9I GGNCC 5 cut(s) 693, 1578, 2427, 2448, 3123
AsuC2I CCSGG 1 cut(s) 2446
AsuHPI GGTGA 7 cut(s) 100, 1697, 1985, 2144, 2389, 2821, 2968
AsuII TTCGAA 2 cut(s) 2945, 3151
AvaI CYCGRG 1 cut(s) 2927
AvaII GGWCC 4 cut(s) 693, 1578, 2427, 2448
BaeGI GKGCMC 1 cut(s) 2228
BaeI ACNNNNGTAYC 2 cut(s) 323, 356
BbsI GAAGAC 2 cut(s) 1313, 2273
BbvI GCAGC 6 cut(s) 105, 1036, 1677, 2341, 2889, 2892
BccI CCATC 9 cut(s) 58, 286, 560, 690, 1270, 1906, 2582, 2689, 2986
BceAI ACGGC 2 cut(s) 2728, 2971
BcgI CGANNNNNNTGC 2 cut(s) 975, 1009
BciT130I CCWGG 3 cut(s) 385, 2238, 2762
BciVI GTATCC 1 cut(s) 381
BclI TGATCA 1 cut(s) 1540
BcnI CCSGG 1 cut(s) 2446
BcoDI GTCTC 4 cut(s) 1450, 2063, 2609, 3101
BfaI CTAG 8 cut(s) 198, 510, 1349, 1586, 1695, 1823, 1958, 3086
BfmI CTRYAG 1 cut(s) 984
BfoI RGCGCY 1 cut(s) 2695
BfuAI ACCTGC 2 cut(s) 965, 1869
BfuI GTATCC 1 cut(s) 381
BglII AGATCT 4 cut(s) 1258, 1285, 1927, 2931
BisI GCNGC 7 cut(s) 119, 1050, 1691, 2330, 2657, 2903, 2906
BlsI GCNGC 7 cut(s) 120, 1051, 1692, 2331, 2658, 2904, 2907
BmcAI AGTACT 1 cut(s) 1488
Bme1390I CCNGG 4 cut(s) 385, 2238, 2446, 2762
Bme18I GGWCC 4 cut(s) 693, 1578, 2427, 2448
BmeT110I CYCGRG 1 cut(s) 2927
BmgT120I GGNCC 5 cut(s) 693, 1578, 2427, 2448, 3123
BmiI GGNNCC 2 cut(s) 381, 2389
BmrFI CCNGG 4 cut(s) 385, 2238, 2446, 2762
BmrI ACTGGG 1 cut(s) 1478
BmsI GCATC 7 cut(s) 160, 1726, 1890, 2050, 2101, 2327, 2775
BmuI ACTGGG 1 cut(s) 1478
BoxI GACNNNNGTC 1 cut(s) 372
BpiI GAAGAC 2 cut(s) 1313, 2273
BpmI CTGGAG 1 cut(s) 2189
Bpu14I TTCGAA 2 cut(s) 2945, 3151
BpuEI CTTGAG 5 cut(s) 320, 904, 1218, 2372, 2866
BpuMI CCSGG 1 cut(s) 2446
BsaI GGTCTC 2 cut(s) 2063, 2609
BsaJI CCNNGG 6 cut(s) 94, 383, 2055, 2064, 2436, 2761
BsaWI WCCGGW 3 cut(s) 76, 1448, 3018
BsaXI ACNNNNNCTCC 2 cut(s) 1430, 1460
Bsc4I CCNNNNNNNGG 7 cut(s) 605, 1489, 1913, 2591, 2592, 2897, 3035
Bse118I RCCGGY 2 cut(s) 1499, 1529
Bse1I ACTGG 5 cut(s) 396, 580, 1484, 1494, 1975
Bse3DI GCAATG 1 cut(s) 2651
BseAI TCCGGA 1 cut(s) 1448
BseBI CCWGG 3 cut(s) 385, 2238, 2762
BseDI CCNNGG 6 cut(s) 94, 383, 2055, 2064, 2436, 2761
BseGI GGATG 9 cut(s) 69, 90, 265, 532, 571, 1281, 2065, 2104, 2503
BseLI CCNNNNNNNGG 7 cut(s) 605, 1489, 1913, 2591, 2592, 2897, 3035
BseMI GCAATG 1 cut(s) 2651
BseMII CTCAG 5 cut(s) 202, 918, 2414, 2636, 2701
BseNI ACTGG 5 cut(s) 396, 580, 1484, 1494, 1975
BseRI GAGGAG 3 cut(s) 191, 2522, 2777
BseSI GKGCMC 1 cut(s) 2228
BseXI GCAGC 6 cut(s) 105, 1036, 1677, 2341, 2889, 2892
BseYI CCCAGC 1 cut(s) 113
Bsh1236I CGCG 1 cut(s) 2013
BshFI GGCC 2 cut(s) 542, 3124
BsiHKCI CYCGRG 1 cut(s) 2927
BsiSI CCGG 6 cut(s) 77, 1449, 1500, 1530, 2446, 3019
BslFI GGGAC 3 cut(s) 1562, 1596, 2418
BslI CCNNNNNNNGG 7 cut(s) 605, 1489, 1913, 2591, 2592, 2897, 3035
BsmAI GTCTC 4 cut(s) 1450, 2063, 2609, 3101
BsmBI CGTCTC 1 cut(s) 3101
BsmFI GGGAC 3 cut(s) 1562, 1596, 2418
BsmI GAATGC 3 cut(s) 921, 1662, 2605
BsnI GGCC 2 cut(s) 542, 3124
Bso31I GGTCTC 2 cut(s) 2063, 2609
BsoBI CYCGRG 1 cut(s) 2927
Bsp119I TTCGAA 2 cut(s) 2945, 3151
Bsp1286I GDGCHC 1 cut(s) 2228
Bsp13I TCCGGA 1 cut(s) 1448
BspACI CCGC 4 cut(s) 111, 563, 2013, 2657
BspANI GGCC 2 cut(s) 542, 3124
BspCNI CTCAG 5 cut(s) 201, 919, 2415, 2637, 2700
BspEI TCCGGA 1 cut(s) 1448
BspFNI CGCG 1 cut(s) 2013
BspLI GGNNCC 2 cut(s) 381, 2389
BspMAI CTGCAG 1 cut(s) 988
BspMI ACCTGC 2 cut(s) 965, 1869
BspPI GGATC 2 cut(s) 885, 983
BspT104I TTCGAA 2 cut(s) 2945, 3151
BspTNI GGTCTC 2 cut(s) 2063, 2609
BsrDI GCAATG 1 cut(s) 2651
BsrFI RCCGGY 2 cut(s) 1499, 1529
BsrI ACTGG 5 cut(s) 396, 580, 1484, 1494, 1975
BssAI RCCGGY 2 cut(s) 1499, 1529
BssECI CCNNGG 6 cut(s) 94, 383, 2055, 2064, 2436, 2761
BssNAI GTATAC 1 cut(s) 649
BssT1I CCWWGG 2 cut(s) 2064, 2436
Bst1107I GTATAC 1 cut(s) 649
Bst2UI CCWGG 3 cut(s) 385, 2238, 2762
Bst4CI ACNGT 6 cut(s) 1220, 1272, 1508, 1553, 1610, 2939
Bst6I CTCTTC 2 cut(s) 40, 498
BstAPI GCANNNNNTGC 1 cut(s) 2665
BstBI TTCGAA 2 cut(s) 2945, 3151
BstC8I GCNNGC 5 cut(s) 1161, 1501, 2052, 2464, 3026
BstDSI CCRYGG 1 cut(s) 2055
BstEII GGTNACC 1 cut(s) 2440
BstF5I GGATG 9 cut(s) 69, 90, 265, 532, 571, 1281, 2065, 2104, 2503
BstFNI CGCG 1 cut(s) 2013
BstH2I RGCGCY 1 cut(s) 2695
BstHHI GCGC 3 cut(s) 2013, 2605, 2694
BstMAI GTCTC 4 cut(s) 1450, 2063, 2609, 3101
BstMWI GCNNNNNNNGC 7 cut(s) 220, 1509, 1723, 2017, 2060, 2602, 2665
BstNI CCWGG 3 cut(s) 385, 2238, 2762
BstNSI RCATGY 4 cut(s) 790, 962, 2054, 2668
BstPAI GACNNNNGTC 1 cut(s) 372
BstPI GGTNACC 1 cut(s) 2440
BstSCI CCNGG 4 cut(s) 383, 2236, 2444, 2760
BstSFI CTRYAG 1 cut(s) 984
BstSLI GKGCMC 1 cut(s) 2228
BstUI CGCG 1 cut(s) 2013
BstV1I GCAGC 6 cut(s) 105, 1036, 1677, 2341, 2889, 2892
BstV2I GAAGAC 2 cut(s) 1313, 2273
BstX2I RGATCY 6 cut(s) 877, 988, 1258, 1285, 1927, 2931
BstXI CCANNNNNNTGG 2 cut(s) 391, 1167
BstYI RGATCY 6 cut(s) 877, 988, 1258, 1285, 1927, 2931
BstZ17I GTATAC 1 cut(s) 649
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 2 cut(s) 542, 3124
BtgI CCRYGG 1 cut(s) 2055
BtsCI GGATG 9 cut(s) 69, 90, 265, 532, 571, 1281, 2065, 2104, 2503
BtsI GCAGTG 1 cut(s) 2816
BtsIMutI CAGTG 3 cut(s) 1652, 1968, 2816
BveI ACCTGC 2 cut(s) 965, 1869
Cac8I GCNNGC 5 cut(s) 1161, 1501, 2052, 2464, 3026
CfoI GCGC 3 cut(s) 2013, 2605, 2694
Cfr10I RCCGGY 2 cut(s) 1499, 1529
Cfr13I GGNCC 5 cut(s) 693, 1578, 2427, 2448, 3123
CseI GACGC 2 cut(s) 1853, 2839
Csp6I GTAC 5 cut(s) 332, 1376, 1487, 1675, 1776
CviQI GTAC 5 cut(s) 332, 1376, 1487, 1675, 1776
Eam1104I CTCTTC 2 cut(s) 40, 498
EarI CTCTTC 2 cut(s) 40, 498
Eco130I CCWWGG 2 cut(s) 2064, 2436
Eco31I GGTCTC 2 cut(s) 2063, 2609
Eco32I GATATC 1 cut(s) 1876
Eco47I GGWCC 4 cut(s) 693, 1578, 2427, 2448
Eco57I CTGAAG 6 cut(s) 294, 1220, 1302, 1628, 1658, 1985
Eco88I CYCGRG 1 cut(s) 2927
Eco91I GGTNACC 1 cut(s) 2440
EcoO109I RGGNCCY 2 cut(s) 1578, 2427
EcoO65I GGTNACC 1 cut(s) 2440
EcoRII CCWGG 3 cut(s) 383, 2236, 2760
EcoRV GATATC 1 cut(s) 1876
EcoT14I CCWWGG 2 cut(s) 2064, 2436
EcoT22I ATGCAT 1 cut(s) 1416
ErhI CCWWGG 2 cut(s) 2064, 2436
Esp3I CGTCTC 1 cut(s) 3101
FalI AAGNNNNNCTT 4 cut(s) 423, 455, 579, 611
FaqI GGGAC 3 cut(s) 1562, 1596, 2418
FauNDI CATATG 1 cut(s) 1124
FbaI TGATCA 1 cut(s) 1540
FblI GTMKAC 3 cut(s) 648, 889, 2818
Fnu4HI GCNGC 7 cut(s) 119, 1050, 1691, 2330, 2657, 2903, 2906
FokI GGATG 9 cut(s) 76, 77, 272, 539, 578, 1288, 2072, 2111, 2510
Fsp4HI GCNGC 7 cut(s) 119, 1050, 1691, 2330, 2657, 2903, 2906
FspBI CTAG 8 cut(s) 198, 510, 1349, 1586, 1695, 1823, 1958, 3086
GlaI GCGC 3 cut(s) 2012, 2604, 2693
GluI GCNGC 7 cut(s) 119, 1050, 1691, 2330, 2657, 2903, 2906
GsaI CCCAGC 1 cut(s) 117
GsuI CTGGAG 1 cut(s) 2189
HaeII RGCGCY 1 cut(s) 2695
HaeIII GGCC 2 cut(s) 542, 3124
HapII CCGG 6 cut(s) 77, 1449, 1500, 1530, 2446, 3019
HgaI GACGC 2 cut(s) 1853, 2839
HhaI GCGC 3 cut(s) 2013, 2605, 2694
Hin6I GCGC 3 cut(s) 2011, 2603, 2692
HinP1I GCGC 3 cut(s) 2011, 2603, 2692
HincII GTYRAC 3 cut(s) 85, 424, 890
HindII GTYRAC 3 cut(s) 85, 424, 890
HindIII AAGCTT 3 cut(s) 1640, 2414, 2474
HpaII CCGG 6 cut(s) 77, 1449, 1500, 1530, 2446, 3019
HphI GGTGA 7 cut(s) 100, 1697, 1985, 2144, 2389, 2821, 2968
Hpy166II GTNNAC 7 cut(s) 85, 424, 649, 890, 1376, 2819, 2870
Hpy8I GTNNAC 7 cut(s) 85, 424, 649, 890, 1376, 2819, 2870
Hpy99I CGWCG 2 cut(s) 2144, 2855
HpyAV CCTTC 9 cut(s) 516, 973, 1002, 2354, 2461, 2488, 2684, 2726, 3029
HpyCH4III ACNGT 6 cut(s) 1220, 1272, 1508, 1553, 1610, 2939
HpyCH4IV ACGT 5 cut(s) 396, 812, 1372, 1796, 3094
HpyF10VI GCNNNNNNNGC 7 cut(s) 220, 1509, 1723, 2017, 2060, 2602, 2665
HpySE526I ACGT 5 cut(s) 396, 812, 1372, 1796, 3094
HspAI GCGC 3 cut(s) 2011, 2603, 2692
Kpn2I TCCGGA 1 cut(s) 1448
KroI GCCGGC 1 cut(s) 1499
KroNI GCCGGC 1 cut(s) 1501
Ksp22I TGATCA 1 cut(s) 1540
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 6 cut(s) 105, 1036, 1677, 2341, 2889, 2892
LweI GCATC 7 cut(s) 160, 1726, 1890, 2050, 2101, 2327, 2775
MaeI CTAG 8 cut(s) 198, 510, 1349, 1586, 1695, 1823, 1958, 3086
MaeII ACGT 5 cut(s) 396, 812, 1372, 1796, 3094
MaeIII GTNAC 6 cut(s) 751, 979, 1525, 1758, 2132, 2440
MfeI CAATTG 3 cut(s) 600, 1314, 3004
MflI RGATCY 6 cut(s) 877, 988, 1258, 1285, 1927, 2931
MhlI GDGCHC 1 cut(s) 2228
MlyI GAGTC 6 cut(s) 210, 515, 672, 895, 1032, 2919
MmeI TCCRAC 8 cut(s) 237, 601, 1306, 1393, 1449, 2203, 2226, 2733
Mph1103I ATGCAT 1 cut(s) 1416
MroI TCCGGA 1 cut(s) 1448
MroNI GCCGGC 1 cut(s) 1499
MroXI GAANNNNTTC 1 cut(s) 2724
MslI CAYNNNNRTG 1 cut(s) 2097
MspA1I CMGCKG 1 cut(s) 113
MspI CCGG 6 cut(s) 77, 1449, 1500, 1530, 2446, 3019
MspR9I CCNGG 4 cut(s) 385, 2238, 2446, 2762
MunI CAATTG 3 cut(s) 600, 1314, 3004
Mva1269I GAATGC 3 cut(s) 921, 1662, 2605
MvaI CCWGG 3 cut(s) 385, 2238, 2762
MvnI CGCG 1 cut(s) 2013
MwoI GCNNNNNNNGC 7 cut(s) 220, 1509, 1723, 2017, 2060, 2602, 2665
NaeI GCCGGC 1 cut(s) 1501
NciI CCSGG 1 cut(s) 2446
NdeI CATATG 1 cut(s) 1124
NgoMIV GCCGGC 1 cut(s) 1499
NlaIV GGNNCC 2 cut(s) 381, 2389
NmuCI GTSAC 2 cut(s) 751, 2132
NsiI ATGCAT 1 cut(s) 1416
NspI RCATGY 4 cut(s) 790, 962, 2054, 2668
NspV TTCGAA 2 cut(s) 2945, 3151
PaeI GCATGC 1 cut(s) 2054
PaeR7I CTCGAG 1 cut(s) 2927
PaqCI CACCTGC 1 cut(s) 965
PcsI WCGNNNNNNNCGW 2 cut(s) 651, 1301
PctI GAATGC 3 cut(s) 921, 1662, 2605
PdiI GCCGGC 1 cut(s) 1501
PdmI GAANNNNTTC 1 cut(s) 2724
PfeI GAWTC 7 cut(s) 305, 2209, 2404, 2510, 2720, 2882, 3153
PflFI GACNNNGTC 2 cut(s) 662, 814
PkrI GCNGC 7 cut(s) 120, 1051, 1692, 2331, 2658, 2904, 2907
PleI GAGTC 6 cut(s) 209, 514, 671, 894, 1032, 2919
PpsI GAGTC 6 cut(s) 209, 514, 671, 894, 1032, 2919
PpuMI RGGWCCY 2 cut(s) 1578, 2427
PshAI GACNNNNGTC 1 cut(s) 372
PshBI ATTAAT 1 cut(s) 1853
Psp1406I AACGTT 2 cut(s) 1796, 3094
Psp5II RGGWCCY 2 cut(s) 1578, 2427
Psp6I CCWGG 3 cut(s) 383, 2236, 2760
PspEI GGTNACC 1 cut(s) 2440
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 3 cut(s) 383, 2236, 2760
PspN4I GGNNCC 2 cut(s) 381, 2389
PspPI GGNCC 5 cut(s) 693, 1578, 2427, 2448, 3123
PspPPI RGGWCCY 2 cut(s) 1578, 2427
PsrI GAACNNNNNNTAC 2 cut(s) 372, 404
PstI CTGCAG 1 cut(s) 988
PsuI RGATCY 6 cut(s) 877, 988, 1258, 1285, 1927, 2931
PsyI GACNNNGTC 2 cut(s) 662, 814
RsaI GTAC 5 cut(s) 333, 1377, 1488, 1676, 1777
RsaNI GTAC 5 cut(s) 332, 1376, 1487, 1675, 1776
RseI CAYNNNNRTG 1 cut(s) 2097
SalI GTCGAC 1 cut(s) 888
SatI GCNGC 7 cut(s) 119, 1050, 1691, 2330, 2657, 2903, 2906
Sau96I GGNCC 5 cut(s) 693, 1578, 2427, 2448, 3123
ScaI AGTACT 1 cut(s) 1488
SchI GAGTC 6 cut(s) 210, 515, 672, 895, 1032, 2919
ScrFI CCNGG 4 cut(s) 385, 2238, 2446, 2762
SduI GDGCHC 1 cut(s) 2228
SfaNI GCATC 7 cut(s) 160, 1726, 1890, 2050, 2101, 2327, 2775
SfcI CTRYAG 1 cut(s) 984
Sfr274I CTCGAG 1 cut(s) 2927
SfuI TTCGAA 2 cut(s) 2945, 3151
SinI GGWCC 4 cut(s) 693, 1578, 2427, 2448
SlaI CTCGAG 1 cut(s) 2927
SmiMI CAYNNNNRTG 1 cut(s) 2097
SmlI CTYRAG 6 cut(s) 335, 883, 1233, 2351, 2845, 2927
SmoI CTYRAG 6 cut(s) 335, 883, 1233, 2351, 2845, 2927
SphI GCATGC 1 cut(s) 2054
SsiI CCGC 4 cut(s) 111, 563, 2013, 2657
SspI AATATT 2 cut(s) 1090, 1110
SspMI CTAG 8 cut(s) 198, 510, 1349, 1586, 1695, 1823, 1958, 3086
StyD4I CCNGG 4 cut(s) 383, 2236, 2444, 2760
StyI CCWWGG 2 cut(s) 2064, 2436
TaaI ACNGT 6 cut(s) 1220, 1272, 1508, 1553, 1610, 2939
TaiI ACGT 5 cut(s) 399, 815, 1375, 1799, 3097
TaqI TCGA 9 cut(s) 165, 889, 1304, 1986, 2212, 2487, 2928, 2945, 3151
TaqII GACCGA 1 cut(s) 2087
TatI WGTACW 2 cut(s) 1486, 1775
TauI GCSGC 1 cut(s) 2659
TfiI GAWTC 7 cut(s) 305, 2209, 2404, 2510, 2720, 2882, 3153
TscAI CASTG 3 cut(s) 1652, 1975, 2816
TseFI GTSAC 2 cut(s) 751, 2132
TseI GCWGC 6 cut(s) 118, 1049, 1690, 2329, 2902, 2905
Tsp45I GTSAC 2 cut(s) 751, 2132
TspGWI ACGGA 2 cut(s) 113, 2072
TspRI CASTG 3 cut(s) 1652, 1975, 2816
Tth111I GACNNNGTC 2 cut(s) 662, 814
VpaK11BI GGWCC 4 cut(s) 693, 1578, 2427, 2448
VspI ATTAAT 1 cut(s) 1853
XapI RAATTY 5 cut(s) 710, 827, 862, 2569, 2840
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 4 cut(s) 790, 962, 2054, 2668
XcmI CCANNNNNNNNNTGG 1 cut(s) 2062
XhoI CTCGAG 1 cut(s) 2927
XmiI GTMKAC 3 cut(s) 648, 889, 2818
XmnI GAANNNNTTC 1 cut(s) 2724
XspI CTAG 8 cut(s) 198, 510, 1349, 1586, 1695, 1823, 1958, 3086
ZrmI AGTACT 1 cut(s) 1488
Zsp2I ATGCAT 1 cut(s) 1416
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.