disease resistance
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 437 |
| Acc36I | ACCTGC | 1 cut(s) | 207 |
| AccB1I | GGYRCC | 2 cut(s) | 711, 952 |
| AccBSI | CCGCTC | 1 cut(s) | 134 |
| AccI | GTMKAC | 2 cut(s) | 1184, 1748 |
| AccII | CGCG | 2 cut(s) | 193, 204 |
| AccIII | TCCGGA | 1 cut(s) | 1237 |
| AciI | CCGC | 9 cut(s) | 79, 134, 181, 191, 193, 258, 724, 1040, 1271 |
| AclWI | GGATC | 2 cut(s) | 959, 972 |
| AcoI | YGGCCR | 2 cut(s) | 214, 265 |
| AcsI | RAATTY | 6 cut(s) | 144, 186, 466, 832, 1432, 1707 |
| AcuI | CTGAAG | 2 cut(s) | 1172, 1518 |
| AfaI | GTAC | 6 cut(s) | 428, 491, 497, 692, 1030, 1460 |
| AfeI | AGCGCT | 1 cut(s) | 109 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 448, 519, 550, 551, 570, 1768 |
| AgsI | TTSAA | 3 cut(s) | 632, 1478, 1827 |
| AhlI | ACTAGT | 1 cut(s) | 1490 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 782, 814, 1190, 1222 |
| AleI | CACNNNNGTG | 1 cut(s) | 1347 |
| AluBI | AGCT | 8 cut(s) | 334, 406, 769, 782, 813, 1202, 1513, 1663 |
| AluI | AGCT | 8 cut(s) | 334, 406, 769, 782, 813, 1202, 1513, 1663 |
| Alw21I | GWGCWC | 1 cut(s) | 408 |
| Alw26I | GTCTC | 1 cut(s) | 255 |
| AlwI | GGATC | 2 cut(s) | 959, 972 |
| Ama87I | CYCGRG | 2 cut(s) | 367, 422 |
| Aor13HI | TCCGGA | 1 cut(s) | 1237 |
| Aor51HI | AGCGCT | 1 cut(s) | 109 |
| AoxI | GGCC | 6 cut(s) | 214, 231, 265, 553, 875, 899 |
| ApeKI | GCWGC | 3 cut(s) | 863, 1484, 1733 |
| ApoI | RAATTY | 6 cut(s) | 144, 186, 466, 832, 1432, 1707 |
| AspLEI | GCGC | 4 cut(s) | 110, 204, 206, 474 |
| AspS9I | GGNCC | 6 cut(s) | 196, 242, 439, 509, 553, 1676 |
| AsuC2I | CCSGG | 4 cut(s) | 246, 383, 479, 545 |
| AsuHPI | GGTGA | 8 cut(s) | 553, 586, 1075, 1340, 1361, 1412, 1619, 1817 |
| AsuNHI | GCTAGC | 1 cut(s) | 1513 |
| AvaI | CYCGRG | 2 cut(s) | 367, 422 |
| AvaII | GGWCC | 5 cut(s) | 196, 242, 439, 509, 1676 |
| AxyI | CCTNAGG | 1 cut(s) | 927 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 418, 451 |
| BamHI | GGATCC | 1 cut(s) | 964 |
| BanI | GGYRCC | 2 cut(s) | 711, 952 |
| BanII | GRGCYC | 2 cut(s) | 408, 423 |
| BauI | CACGAG | 1 cut(s) | 517 |
| Bbv12I | GWGCWC | 1 cut(s) | 408 |
| BbvI | GCAGC | 3 cut(s) | 875, 1471, 1745 |
| BccI | CCATC | 4 cut(s) | 811, 1004, 1598, 1796 |
| BceAI | ACGGC | 4 cut(s) | 280, 514, 724, 940 |
| BcnI | CCSGG | 4 cut(s) | 246, 383, 479, 545 |
| BcoDI | GTCTC | 1 cut(s) | 255 |
| BcuI | ACTAGT | 1 cut(s) | 1490 |
| BfaI | CTAG | 5 cut(s) | 840, 1131, 1491, 1514, 1785 |
| BfmI | CTRYAG | 1 cut(s) | 1753 |
| BfoI | RGCGCY | 1 cut(s) | 111 |
| BfuAI | ACCTGC | 1 cut(s) | 207 |
| BisI | GCNGC | 5 cut(s) | 725, 864, 1272, 1485, 1734 |
| BlsI | GCNGC | 5 cut(s) | 726, 865, 1273, 1486, 1735 |
| BmcAI | AGTACT | 1 cut(s) | 1460 |
| Bme1390I | CCNGG | 4 cut(s) | 246, 383, 479, 545 |
| Bme18I | GGWCC | 5 cut(s) | 196, 242, 439, 509, 1676 |
| BmeT110I | CYCGRG | 2 cut(s) | 367, 422 |
| BmgT120I | GGNCC | 6 cut(s) | 196, 242, 439, 509, 553, 1676 |
| BmiI | GGNNCC | 7 cut(s) | 197, 253, 511, 554, 713, 954, 966 |
| BmrFI | CCNGG | 4 cut(s) | 246, 383, 479, 545 |
| BmrI | ACTGGG | 1 cut(s) | 1471 |
| BmsI | GCATC | 4 cut(s) | 265, 1186, 1222, 1240 |
| BmtI | GCTAGC | 1 cut(s) | 1517 |
| BmuI | ACTGGG | 1 cut(s) | 1471 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 298, 330 |
| BpmI | CTGGAG | 2 cut(s) | 88, 392 |
| BpuEI | CTTGAG | 2 cut(s) | 80, 344 |
| BpuMI | CCSGG | 4 cut(s) | 246, 383, 479, 545 |
| Bsa29I | ATCGAT | 1 cut(s) | 273 |
| BsaJI | CCNNGG | 3 cut(s) | 191, 740, 1679 |
| BsaWI | WCCGGW | 3 cut(s) | 441, 1162, 1237 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1205, 1235, 1457, 1487 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 448, 519, 550, 551, 570, 1768 |
| Bse118I | RCCGGY | 5 cut(s) | 212, 354, 555, 901, 915 |
| Bse1I | ACTGG | 1 cut(s) | 1466 |
| Bse21I | CCTNAGG | 1 cut(s) | 927 |
| Bse3DI | GCAATG | 1 cut(s) | 1509 |
| BseAI | TCCGGA | 1 cut(s) | 1237 |
| BseCI | ATCGAT | 1 cut(s) | 273 |
| BseDI | CCNNGG | 3 cut(s) | 191, 740, 1679 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 448, 519, 550, 551, 570, 1768 |
| BseMI | GCAATG | 1 cut(s) | 1509 |
| BseMII | CTCAG | 2 cut(s) | 774, 941 |
| BseNI | ACTGG | 1 cut(s) | 1466 |
| BsePI | GCGCGC | 1 cut(s) | 202 |
| BseRI | GAGGAG | 3 cut(s) | 252, 1136, 1226 |
| BseX3I | CGGCCG | 2 cut(s) | 214, 265 |
| BseXI | GCAGC | 3 cut(s) | 875, 1471, 1745 |
| BseYI | CCCAGC | 1 cut(s) | 1667 |
| BsgI | GTGCAG | 1 cut(s) | 882 |
| Bsh1236I | CGCG | 2 cut(s) | 193, 204 |
| Bsh1285I | CGRYCG | 4 cut(s) | 217, 268, 433, 1637 |
| BshFI | GGCC | 6 cut(s) | 216, 233, 267, 555, 877, 901 |
| BshNI | GGYRCC | 2 cut(s) | 711, 952 |
| BshVI | ATCGAT | 1 cut(s) | 273 |
| BsiEI | CGRYCG | 4 cut(s) | 217, 268, 433, 1637 |
| BsiHKAI | GWGCWC | 1 cut(s) | 408 |
| BsiHKCI | CYCGRG | 2 cut(s) | 367, 422 |
| BslFI | GGGAC | 2 cut(s) | 146, 209 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 448, 519, 550, 551, 570, 1768 |
| BsmAI | GTCTC | 1 cut(s) | 255 |
| BsmBI | CGTCTC | 1 cut(s) | 255 |
| BsmFI | GGGAC | 2 cut(s) | 146, 209 |
| BsnI | GGCC | 6 cut(s) | 216, 233, 267, 555, 877, 901 |
| BsoBI | CYCGRG | 2 cut(s) | 367, 422 |
| Bsp1286I | GDGCHC | 2 cut(s) | 408, 423 |
| Bsp13I | TCCGGA | 1 cut(s) | 1237 |
| Bsp143I | GATC | 1 cut(s) | 964 |
| Bsp19I | CCATGG | 1 cut(s) | 1679 |
| BspACI | CCGC | 9 cut(s) | 79, 134, 181, 191, 193, 258, 724, 1040, 1271 |
| BspANI | GGCC | 6 cut(s) | 216, 233, 267, 555, 877, 901 |
| BspCNI | CTCAG | 2 cut(s) | 775, 940 |
| BspDI | ATCGAT | 1 cut(s) | 273 |
| BspEI | TCCGGA | 1 cut(s) | 1237 |
| BspFNI | CGCG | 2 cut(s) | 193, 204 |
| BspLI | GGNNCC | 7 cut(s) | 197, 253, 511, 554, 713, 954, 966 |
| BspMI | ACCTGC | 1 cut(s) | 207 |
| BspOI | GCTAGC | 1 cut(s) | 1517 |
| BspPI | GGATC | 2 cut(s) | 959, 972 |
| BspT107I | GGYRCC | 2 cut(s) | 711, 952 |
| BsrBI | CCGCTC | 1 cut(s) | 134 |
| BsrDI | GCAATG | 1 cut(s) | 1509 |
| BsrFI | RCCGGY | 5 cut(s) | 212, 354, 555, 901, 915 |
| BsrI | ACTGG | 1 cut(s) | 1466 |
| BssAI | RCCGGY | 5 cut(s) | 212, 354, 555, 901, 915 |
| BssECI | CCNNGG | 3 cut(s) | 191, 740, 1679 |
| BssHII | GCGCGC | 1 cut(s) | 202 |
| BssMI | GATC | 1 cut(s) | 964 |
| BssNAI | GTATAC | 2 cut(s) | 1185, 1749 |
| BssSI | CACGAG | 1 cut(s) | 517 |
| BssT1I | CCWWGG | 1 cut(s) | 1679 |
| Bst1107I | GTATAC | 2 cut(s) | 1185, 1749 |
| Bst2BI | CACGAG | 1 cut(s) | 517 |
| Bst4CI | ACNGT | 5 cut(s) | 160, 175, 434, 1328, 1719 |
| Bst6I | CTCTTC | 7 cut(s) | 299, 600, 647, 890, 1389, 1440, 1694 |
| BstC8I | GCNNGC | 8 cut(s) | 204, 214, 316, 336, 1515, 1665, 1731, 1791 |
| BstDEI | CTNAG | 4 cut(s) | 5, 783, 927, 1203 |
| BstDSI | CCRYGG | 3 cut(s) | 191, 740, 1679 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1766 |
| BstFNI | CGCG | 2 cut(s) | 193, 204 |
| BstH2I | RGCGCY | 1 cut(s) | 111 |
| BstHHI | GCGC | 4 cut(s) | 110, 204, 206, 474 |
| BstKTI | GATC | 1 cut(s) | 967 |
| BstMAI | GTCTC | 1 cut(s) | 255 |
| BstMBI | GATC | 1 cut(s) | 964 |
| BstMCI | CGRYCG | 4 cut(s) | 217, 268, 433, 1637 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 199, 264, 418, 745, 1493 |
| BstNSI | RCATGY | 1 cut(s) | 1793 |
| BstSCI | CCNGG | 4 cut(s) | 244, 381, 477, 543 |
| BstSFI | CTRYAG | 1 cut(s) | 1753 |
| BstUI | CGCG | 2 cut(s) | 193, 204 |
| BstV1I | GCAGC | 3 cut(s) | 875, 1471, 1745 |
| BstX2I | RGATCY | 1 cut(s) | 964 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 416 |
| BstYI | RGATCY | 1 cut(s) | 964 |
| BstZ17I | GTATAC | 2 cut(s) | 1185, 1749 |
| BstZI | CGGCCG | 2 cut(s) | 214, 265 |
| Bsu15I | ATCGAT | 1 cut(s) | 273 |
| Bsu36I | CCTNAGG | 1 cut(s) | 927 |
| BsuRI | GGCC | 6 cut(s) | 216, 233, 267, 555, 877, 901 |
| BsuTUI | ATCGAT | 1 cut(s) | 273 |
| BtgI | CCRYGG | 3 cut(s) | 191, 740, 1679 |
| BtsI | GCAGTG | 1 cut(s) | 755 |
| BtsIMutI | CAGTG | 2 cut(s) | 755, 917 |
| BveI | ACCTGC | 1 cut(s) | 207 |
| Cac8I | GCNNGC | 8 cut(s) | 204, 214, 316, 336, 1515, 1665, 1731, 1791 |
| CfoI | GCGC | 4 cut(s) | 110, 204, 206, 474 |
| Cfr10I | RCCGGY | 5 cut(s) | 212, 354, 555, 901, 915 |
| Cfr13I | GGNCC | 6 cut(s) | 196, 242, 439, 509, 553, 1676 |
| Cfr42I | CCGCGG | 1 cut(s) | 194 |
| ClaI | ATCGAT | 1 cut(s) | 273 |
| CseI | GACGC | 1 cut(s) | 670 |
| Csp6I | GTAC | 6 cut(s) | 427, 490, 496, 691, 1029, 1459 |
| CviAII | CATG | 6 cut(s) | 448, 867, 944, 1621, 1680, 1790 |
| CviQI | GTAC | 6 cut(s) | 427, 490, 496, 691, 1029, 1459 |
| DdeI | CTNAG | 4 cut(s) | 5, 783, 927, 1203 |
| DpnI | GATC | 1 cut(s) | 966 |
| DpnII | GATC | 1 cut(s) | 964 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 437 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 437 |
| EaeI | YGGCCR | 2 cut(s) | 214, 265 |
| EagI | CGGCCG | 2 cut(s) | 214, 265 |
| Eam1104I | CTCTTC | 7 cut(s) | 299, 600, 647, 890, 1389, 1440, 1694 |
| EarI | CTCTTC | 7 cut(s) | 299, 600, 647, 890, 1389, 1440, 1694 |
| EciI | GGCGGA | 2 cut(s) | 68, 273 |
| Ecl136II | GAGCTC | 1 cut(s) | 406 |
| EclXI | CGGCCG | 2 cut(s) | 214, 265 |
| Eco130I | CCWWGG | 1 cut(s) | 1679 |
| Eco24I | GRGCYC | 2 cut(s) | 408, 423 |
| Eco47I | GGWCC | 5 cut(s) | 196, 242, 439, 509, 1676 |
| Eco47III | AGCGCT | 1 cut(s) | 109 |
| Eco52I | CGGCCG | 2 cut(s) | 214, 265 |
| Eco53kI | GAGCTC | 1 cut(s) | 406 |
| Eco57I | CTGAAG | 2 cut(s) | 1172, 1518 |
| Eco81I | CCTNAGG | 1 cut(s) | 927 |
| Eco88I | CYCGRG | 2 cut(s) | 367, 422 |
| EcoICRI | GAGCTC | 1 cut(s) | 406 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1766 |
| EcoO109I | RGGNCCY | 1 cut(s) | 196 |
| EcoRI | GAATTC | 1 cut(s) | 1707 |
| EcoT14I | CCWWGG | 1 cut(s) | 1679 |
| EcoT38I | GRGCYC | 2 cut(s) | 408, 423 |
| ErhI | CCWWGG | 1 cut(s) | 1679 |
| Esp3I | CGTCTC | 1 cut(s) | 255 |
| FaeI | CATG | 6 cut(s) | 451, 870, 947, 1624, 1683, 1793 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 797, 829 |
| FaqI | GGGAC | 2 cut(s) | 146, 209 |
| FatI | CATG | 6 cut(s) | 447, 866, 943, 1620, 1679, 1789 |
| FauI | CCCGC | 3 cut(s) | 186, 188, 1033 |
| FblI | GTMKAC | 2 cut(s) | 1184, 1748 |
| Fnu4HI | GCNGC | 5 cut(s) | 725, 864, 1272, 1485, 1734 |
| FriOI | GRGCYC | 2 cut(s) | 408, 423 |
| Fsp4HI | GCNGC | 5 cut(s) | 725, 864, 1272, 1485, 1734 |
| FspBI | CTAG | 5 cut(s) | 840, 1131, 1491, 1514, 1785 |
| GlaI | GCGC | 4 cut(s) | 109, 203, 205, 473 |
| GluI | GCNGC | 5 cut(s) | 725, 864, 1272, 1485, 1734 |
| GsaI | CCCAGC | 1 cut(s) | 1671 |
| GsuI | CTGGAG | 2 cut(s) | 88, 392 |
| HaeII | RGCGCY | 1 cut(s) | 111 |
| HaeIII | GGCC | 6 cut(s) | 216, 233, 267, 555, 877, 901 |
| HgaI | GACGC | 1 cut(s) | 670 |
| HhaI | GCGC | 4 cut(s) | 110, 204, 206, 474 |
| Hin1II | CATG | 6 cut(s) | 451, 870, 947, 1624, 1683, 1793 |
| Hin6I | GCGC | 4 cut(s) | 108, 202, 204, 472 |
| HinP1I | GCGC | 4 cut(s) | 108, 202, 204, 472 |
| HincII | GTYRAC | 1 cut(s) | 1741 |
| HindII | GTYRAC | 1 cut(s) | 1741 |
| HindIII | AAGCTT | 1 cut(s) | 1661 |
| HinfI | GANTC | 5 cut(s) | 7, 270, 341, 1066, 1156 |
| HpaI | GTTAAC | 1 cut(s) | 1741 |
| HphI | GGTGA | 8 cut(s) | 553, 586, 1075, 1340, 1361, 1412, 1619, 1817 |
| Hpy166II | GTNNAC | 8 cut(s) | 561, 753, 1029, 1185, 1287, 1591, 1741, 1749 |
| Hpy188I | TCNGA | 7 cut(s) | 69, 131, 142, 286, 509, 733, 1071 |
| Hpy188III | TCNNGA | 7 cut(s) | 11, 361, 641, 929, 962, 1238, 1799 |
| Hpy8I | GTNNAC | 8 cut(s) | 561, 753, 1029, 1185, 1287, 1591, 1741, 1749 |
| Hpy99I | CGWCG | 3 cut(s) | 536, 539, 569 |
| HpyAV | CCTTC | 9 cut(s) | 27, 51, 223, 1054, 1066, 1273, 1568, 1577, 1762 |
| HpyCH4III | ACNGT | 5 cut(s) | 160, 175, 434, 1328, 1719 |
| HpyCH4V | TGCA | 4 cut(s) | 278, 863, 1177, 1793 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 199, 264, 418, 745, 1493 |
| HpyF3I | CTNAG | 4 cut(s) | 5, 783, 927, 1203 |
| Hsp92II | CATG | 6 cut(s) | 451, 870, 947, 1624, 1683, 1793 |
| HspAI | GCGC | 4 cut(s) | 108, 202, 204, 472 |
| Kpn2I | TCCGGA | 1 cut(s) | 1237 |
| KroI | GCCGGC | 1 cut(s) | 212 |
| KroNI | GCCGGC | 1 cut(s) | 214 |
| KspAI | GTTAAC | 1 cut(s) | 1741 |
| KspI | CCGCGG | 1 cut(s) | 194 |
| Kzo9I | GATC | 1 cut(s) | 964 |
| LmnI | GCTCC | 8 cut(s) | 115, 219, 257, 411, 745, 810, 976, 1240 |
| Lsp1109I | GCAGC | 3 cut(s) | 875, 1471, 1745 |
| LweI | GCATC | 4 cut(s) | 265, 1186, 1222, 1240 |
| MaeI | CTAG | 5 cut(s) | 840, 1131, 1491, 1514, 1785 |
| MalI | GATC | 1 cut(s) | 966 |
| MbiI | CCGCTC | 1 cut(s) | 134 |
| MboI | GATC | 1 cut(s) | 964 |
| MfeI | CAATTG | 1 cut(s) | 1559 |
| MflI | RGATCY | 1 cut(s) | 964 |
| MhlI | GDGCHC | 2 cut(s) | 408, 423 |
| MlyI | GAGTC | 2 cut(s) | 16, 350 |
| MmeI | TCCRAC | 4 cut(s) | 648, 780, 978, 1188 |
| MroI | TCCGGA | 1 cut(s) | 1237 |
| MroNI | GCCGGC | 1 cut(s) | 212 |
| MseI | TTAA | 4 cut(s) | 1095, 1167, 1695, 1740 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1347 |
| MspA1I | CMGCKG | 1 cut(s) | 193 |
| MspR9I | CCNGG | 4 cut(s) | 246, 383, 479, 545 |
| MunI | CAATTG | 1 cut(s) | 1559 |
| MvnI | CGCG | 2 cut(s) | 193, 204 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 199, 264, 418, 745, 1493 |
| NaeI | GCCGGC | 1 cut(s) | 214 |
| NciI | CCSGG | 4 cut(s) | 246, 383, 479, 545 |
| NcoI | CCATGG | 1 cut(s) | 1679 |
| NdeII | GATC | 1 cut(s) | 964 |
| NgoMIV | GCCGGC | 1 cut(s) | 212 |
| NheI | GCTAGC | 1 cut(s) | 1513 |
| NlaIII | CATG | 6 cut(s) | 451, 870, 947, 1624, 1683, 1793 |
| NlaIV | GGNNCC | 7 cut(s) | 197, 253, 511, 554, 713, 954, 966 |
| NmeAIII | GCCGAG | 1 cut(s) | 364 |
| NspI | RCATGY | 1 cut(s) | 1793 |
| OliI | CACNNNNGTG | 1 cut(s) | 1347 |
| PaeI | GCATGC | 1 cut(s) | 1793 |
| PauI | GCGCGC | 1 cut(s) | 202 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 270, 537, 737, 1332 |
| PdiI | GCCGGC | 1 cut(s) | 214 |
| PfeI | GAWTC | 3 cut(s) | 270, 1066, 1156 |
| PflFI | GACNNNGTC | 1 cut(s) | 841 |
| PfoI | TCCNGGA | 1 cut(s) | 244 |
| PkrI | GCNGC | 5 cut(s) | 726, 865, 1273, 1486, 1735 |
| PleI | GAGTC | 2 cut(s) | 15, 349 |
| PpsI | GAGTC | 2 cut(s) | 15, 349 |
| PpuMI | RGGWCCY | 1 cut(s) | 196 |
| Psp124BI | GAGCTC | 1 cut(s) | 408 |
| Psp5II | RGGWCCY | 1 cut(s) | 196 |
| PspFI | CCCAGC | 1 cut(s) | 1667 |
| PspN4I | GGNNCC | 7 cut(s) | 197, 253, 511, 554, 713, 954, 966 |
| PspPI | GGNCC | 6 cut(s) | 196, 242, 439, 509, 553, 1676 |
| PspPPI | RGGWCCY | 1 cut(s) | 196 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 488, 520 |
| PsuI | RGATCY | 1 cut(s) | 964 |
| PsyI | GACNNNGTC | 1 cut(s) | 841 |
| PteI | GCGCGC | 1 cut(s) | 202 |
| RsaI | GTAC | 6 cut(s) | 428, 491, 497, 692, 1030, 1460 |
| RsaNI | GTAC | 6 cut(s) | 427, 490, 496, 691, 1029, 1459 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1347 |
| SacI | GAGCTC | 1 cut(s) | 408 |
| SacII | CCGCGG | 1 cut(s) | 194 |
| SaqAI | TTAA | 4 cut(s) | 1095, 1167, 1695, 1740 |
| SatI | GCNGC | 5 cut(s) | 725, 864, 1272, 1485, 1734 |
| Sau3AI | GATC | 1 cut(s) | 964 |
| Sau96I | GGNCC | 6 cut(s) | 196, 242, 439, 509, 553, 1676 |
| ScaI | AGTACT | 1 cut(s) | 1460 |
| SchI | GAGTC | 2 cut(s) | 16, 350 |
| ScrFI | CCNGG | 4 cut(s) | 246, 383, 479, 545 |
| SduI | GDGCHC | 2 cut(s) | 408, 423 |
| SfaNI | GCATC | 4 cut(s) | 265, 1186, 1222, 1240 |
| SfcI | CTRYAG | 1 cut(s) | 1753 |
| Sfr303I | CCGCGG | 1 cut(s) | 194 |
| SgrBI | CCGCGG | 1 cut(s) | 194 |
| SinI | GGWCC | 5 cut(s) | 196, 242, 439, 509, 1676 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1347 |
| SmlI | CTYRAG | 2 cut(s) | 95, 359 |
| SmoI | CTYRAG | 2 cut(s) | 95, 359 |
| SpeI | ACTAGT | 1 cut(s) | 1490 |
| SphI | GCATGC | 1 cut(s) | 1793 |
| SsiI | CCGC | 9 cut(s) | 79, 134, 181, 191, 193, 258, 724, 1040, 1271 |
| SspMI | CTAG | 5 cut(s) | 840, 1131, 1491, 1514, 1785 |
| SstI | GAGCTC | 1 cut(s) | 408 |
| StyD4I | CCNGG | 4 cut(s) | 244, 381, 477, 543 |
| StyI | CCWWGG | 1 cut(s) | 1679 |
| TaaI | ACNGT | 5 cut(s) | 160, 175, 434, 1328, 1719 |
| TaqI | TCGA | 3 cut(s) | 273, 344, 1305 |
| TaqII | GACCGA | 1 cut(s) | 1651 |
| TatI | WGTACW | 2 cut(s) | 1028, 1458 |
| TauI | GCSGC | 2 cut(s) | 727, 1274 |
| TfiI | GAWTC | 3 cut(s) | 270, 1066, 1156 |
| Tru1I | TTAA | 4 cut(s) | 1095, 1167, 1695, 1740 |
| Tru9I | TTAA | 4 cut(s) | 1095, 1167, 1695, 1740 |
| TscAI | CASTG | 2 cut(s) | 755, 917 |
| TseI | GCWGC | 3 cut(s) | 863, 1484, 1733 |
| TspDTI | ATGAA | 4 cut(s) | 436, 932, 1326, 1626 |
| TspGWI | ACGGA | 4 cut(s) | 989, 1170, 1304, 1537 |
| TspRI | CASTG | 2 cut(s) | 755, 917 |
| Tth111I | GACNNNGTC | 1 cut(s) | 841 |
| VpaK11BI | GGWCC | 5 cut(s) | 196, 242, 439, 509, 1676 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1766 |
| XapI | RAATTY | 6 cut(s) | 144, 186, 466, 832, 1432, 1707 |
| XceI | RCATGY | 1 cut(s) | 1793 |
| XmiI | GTMKAC | 2 cut(s) | 1184, 1748 |
| XspI | CTAG | 5 cut(s) | 840, 1131, 1491, 1514, 1785 |
| ZrmI | AGTACT | 1 cut(s) | 1460 |