Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 11 - 104 | 1.5e-16 | Rx N-terminal domain |
| NB-ARC | PF00931 | 179 - 351 | 7.5e-40 | NB-ARC domain |
| WHD_DRP | PF23559 | 435 - 505 | 5e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 581 - 883 | 6.3e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 700 - 822 | 3.9e-40 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 1670, 2745 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2929 |
| AccI | GTMKAC | 1 cut(s) | 657 |
| AccII | CGCG | 2 cut(s) | 698, 2127 |
| AccIII | TCCGGA | 2 cut(s) | 2643, 2947 |
| AciI | CCGC | 3 cut(s) | 696, 2127, 2566 |
| AclI | AACGTT | 1 cut(s) | 1282 |
| AclWI | GGATC | 2 cut(s) | 1061, 2542 |
| AcoI | YGGCCR | 1 cut(s) | 1356 |
| AcsI | RAATTY | 8 cut(s) | 302, 335, 422, 486, 719, 1637, 2552, 2803 |
| AcuI | CTGAAG | 3 cut(s) | 267, 1416, 2099 |
| AdeI | CACNNNGTG | 1 cut(s) | 1460 |
| AfaI | GTAC | 6 cut(s) | 1790, 1891, 1999, 2332, 2355, 2800 |
| AflII | CTTAAG | 1 cut(s) | 892 |
| AflIII | ACRYGT | 3 cut(s) | 1848, 2756, 2784 |
| AhlI | ACTAGT | 1 cut(s) | 2218 |
| AjnI | CCWGG | 1 cut(s) | 93 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 288, 320 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2757, 2789 |
| Alw26I | GTCTC | 7 cut(s) | 542, 1151, 1217, 1528, 2173, 2485, 2645 |
| AlwI | GGATC | 2 cut(s) | 1061, 2542 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 882 |
| Ama87I | CYCGRG | 2 cut(s) | 72, 1432 |
| Aor13HI | TCCGGA | 2 cut(s) | 2643, 2947 |
| AoxI | GGCC | 2 cut(s) | 1114, 1356 |
| ApeKI | GCWGC | 5 cut(s) | 205, 679, 914, 1127, 2830 |
| ApoI | RAATTY | 8 cut(s) | 302, 335, 422, 486, 719, 1637, 2552, 2803 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 839 |
| AspLEI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2746, 2839 |
| AspS9I | GGNCC | 2 cut(s) | 2489, 2883 |
| AsuC2I | CCSGG | 1 cut(s) | 2342 |
| AsuHPI | GGTGA | 7 cut(s) | 680, 980, 1472, 1477, 1594, 1634, 2516 |
| AsuII | TTCGAA | 1 cut(s) | 2556 |
| AvaI | CYCGRG | 2 cut(s) | 72, 1432 |
| AvaII | GGWCC | 2 cut(s) | 2489, 2883 |
| AxyI | CCTNAGG | 1 cut(s) | 1691 |
| BbsI | GAAGAC | 3 cut(s) | 255, 519, 641 |
| BbvI | GCAGC | 5 cut(s) | 217, 691, 926, 1114, 2817 |
| BccI | CCATC | 5 cut(s) | 999, 1348, 1619, 1989, 2988 |
| BciT130I | CCWGG | 1 cut(s) | 95 |
| BclI | TGATCA | 1 cut(s) | 1468 |
| BcnI | CCSGG | 1 cut(s) | 2342 |
| BcoDI | GTCTC | 7 cut(s) | 542, 1151, 1217, 1528, 2173, 2485, 2645 |
| BcuI | ACTAGT | 1 cut(s) | 2218 |
| BfaI | CTAG | 4 cut(s) | 414, 419, 2219, 2426 |
| BfmI | CTRYAG | 2 cut(s) | 912, 2079 |
| BfrI | CTTAAG | 1 cut(s) | 892 |
| BglII | AGATCT | 3 cut(s) | 348, 1363, 2041 |
| BisI | GCNGC | 5 cut(s) | 206, 680, 915, 1128, 2831 |
| BlpI | GCTNAGC | 2 cut(s) | 648, 1659 |
| BlsI | GCNGC | 5 cut(s) | 207, 681, 916, 1129, 2832 |
| Bme1390I | CCNGG | 2 cut(s) | 95, 2342 |
| Bme18I | GGWCC | 2 cut(s) | 2489, 2883 |
| BmeT110I | CYCGRG | 2 cut(s) | 72, 1432 |
| BmgT120I | GGNCC | 2 cut(s) | 2489, 2883 |
| BmrFI | CCNGG | 2 cut(s) | 95, 2342 |
| BmrI | ACTGGG | 3 cut(s) | 892, 2673, 2814 |
| BmsI | GCATC | 9 cut(s) | 160, 232, 433, 877, 971, 1645, 2004, 2497, 2889 |
| BmuI | ACTGGG | 3 cut(s) | 892, 2673, 2814 |
| BoxI | GACNNNNGTC | 1 cut(s) | 519 |
| BpiI | GAAGAC | 3 cut(s) | 255, 519, 641 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 15, 47, 1576, 1608 |
| BpmI | CTGGAG | 3 cut(s) | 1548, 1568, 2906 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 648, 1659 |
| Bpu14I | TTCGAA | 1 cut(s) | 2556 |
| BpuEI | CTTGAG | 2 cut(s) | 65, 797 |
| BpuMI | CCSGG | 1 cut(s) | 2342 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1071, 2858, 2979 |
| BsaI | GGTCTC | 1 cut(s) | 2485 |
| BsaJI | CCNNGG | 2 cut(s) | 94, 359 |
| BsaWI | WCCGGW | 3 cut(s) | 2643, 2890, 2947 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1728, 1758, 2942, 2972 |
| Bse1I | ACTGG | 5 cut(s) | 887, 1883, 2668, 2820, 2923 |
| Bse21I | CCTNAGG | 1 cut(s) | 1691 |
| Bse3DI | GCAATG | 3 cut(s) | 426, 955, 1766 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1071, 2858, 2979 |
| BseAI | TCCGGA | 2 cut(s) | 2643, 2947 |
| BseBI | CCWGG | 1 cut(s) | 95 |
| BseDI | CCNNGG | 2 cut(s) | 94, 359 |
| BseGI | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BseJI | GATNNNNATC | 3 cut(s) | 1071, 2858, 2979 |
| BseMI | GCAATG | 3 cut(s) | 426, 955, 1766 |
| BseMII | CTCAG | 8 cut(s) | 102, 662, 999, 1682, 2184, 2435, 2484, 2870 |
| BseNI | ACTGG | 5 cut(s) | 887, 1883, 2668, 2820, 2923 |
| BseRI | GAGGAG | 4 cut(s) | 191, 1025, 1418, 2625 |
| BseXI | GCAGC | 5 cut(s) | 217, 691, 926, 1114, 2817 |
| BsgI | GTGCAG | 2 cut(s) | 224, 1692 |
| Bsh1236I | CGCG | 2 cut(s) | 698, 2127 |
| BshFI | GGCC | 2 cut(s) | 1116, 1358 |
| BsiHKCI | CYCGRG | 2 cut(s) | 72, 1432 |
| BsiSI | CCGG | 4 cut(s) | 2342, 2644, 2891, 2948 |
| BslFI | GGGAC | 1 cut(s) | 2210 |
| BsmAI | GTCTC | 7 cut(s) | 542, 1151, 1217, 1528, 2173, 2485, 2645 |
| BsmBI | CGTCTC | 1 cut(s) | 2645 |
| BsmFI | GGGAC | 1 cut(s) | 2210 |
| BsnI | GGCC | 2 cut(s) | 1116, 1358 |
| Bso31I | GGTCTC | 1 cut(s) | 2485 |
| BsoBI | CYCGRG | 2 cut(s) | 72, 1432 |
| Bsp119I | TTCGAA | 1 cut(s) | 2556 |
| Bsp13I | TCCGGA | 2 cut(s) | 2643, 2947 |
| Bsp1407I | TGTACA | 1 cut(s) | 2798 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 648, 1659 |
| BspACI | CCGC | 3 cut(s) | 696, 2127, 2566 |
| BspANI | GGCC | 2 cut(s) | 1116, 1358 |
| BspCNI | CTCAG | 8 cut(s) | 103, 661, 1000, 1683, 2183, 2436, 2485, 2871 |
| BspEI | TCCGGA | 2 cut(s) | 2643, 2947 |
| BspFNI | CGCG | 2 cut(s) | 698, 2127 |
| BspHI | TCATGA | 3 cut(s) | 2089, 2310, 2629 |
| BspMAI | CTGCAG | 2 cut(s) | 916, 2083 |
| BspPI | GGATC | 2 cut(s) | 1061, 2542 |
| BspT104I | TTCGAA | 1 cut(s) | 2556 |
| BspTI | CTTAAG | 1 cut(s) | 892 |
| BspTNI | GGTCTC | 1 cut(s) | 2485 |
| BsrDI | GCAATG | 3 cut(s) | 426, 955, 1766 |
| BsrGI | TGTACA | 1 cut(s) | 2798 |
| BsrI | ACTGG | 5 cut(s) | 887, 1883, 2668, 2820, 2923 |
| BssECI | CCNNGG | 2 cut(s) | 94, 359 |
| BssNAI | GTATAC | 1 cut(s) | 658 |
| BssT1I | CCWWGG | 1 cut(s) | 359 |
| Bst1107I | GTATAC | 1 cut(s) | 658 |
| Bst2UI | CCWGG | 1 cut(s) | 95 |
| Bst4CI | ACNGT | 7 cut(s) | 878, 1556, 1713, 1833, 1928, 2408, 2798 |
| Bst6I | CTCTTC | 2 cut(s) | 2388, 2889 |
| BstAFI | CTTAAG | 1 cut(s) | 892 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 959, 1040 |
| BstAUI | TGTACA | 1 cut(s) | 2798 |
| BstBI | TTCGAA | 1 cut(s) | 2556 |
| BstC8I | GCNNGC | 3 cut(s) | 1118, 1239, 2835 |
| BstF5I | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BstFNI | CGCG | 2 cut(s) | 698, 2127 |
| BstHHI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2746, 2839 |
| BstMAI | GTCTC | 7 cut(s) | 542, 1151, 1217, 1528, 2173, 2485, 2645 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 211, 220, 959, 1040, 1584, 1756, 2572, 2836 |
| BstNI | CCWGG | 1 cut(s) | 95 |
| BstNSI | RCATGY | 5 cut(s) | 1043, 1852, 2760, 2788, 2837 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 519 |
| BstSCI | CCNGG | 2 cut(s) | 93, 2340 |
| BstSFI | CTRYAG | 2 cut(s) | 912, 2079 |
| BstUI | CGCG | 2 cut(s) | 698, 2127 |
| BstV1I | GCAGC | 5 cut(s) | 217, 691, 926, 1114, 2817 |
| BstV2I | GAAGAC | 3 cut(s) | 255, 519, 641 |
| BstX2I | RGATCY | 5 cut(s) | 348, 1066, 1363, 2041, 2534 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1245 |
| BstYI | RGATCY | 5 cut(s) | 348, 1066, 1363, 2041, 2534 |
| BstZ17I | GTATAC | 1 cut(s) | 658 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1691 |
| BsuRI | GGCC | 2 cut(s) | 1116, 1358 |
| BtsCI | GGATG | 5 cut(s) | 90, 448, 541, 892, 1359 |
| BtsI | GCAGTG | 1 cut(s) | 390 |
| BtsIMutI | CAGTG | 5 cut(s) | 108, 390, 880, 1561, 2827 |
| Cac8I | GCNNGC | 3 cut(s) | 1118, 1239, 2835 |
| CaiI | CAGNNNCTG | 1 cut(s) | 882 |
| CciI | TCATGA | 3 cut(s) | 2089, 2310, 2629 |
| CfoI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2746, 2839 |
| Cfr13I | GGNCC | 2 cut(s) | 2489, 2883 |
| Csp6I | GTAC | 6 cut(s) | 1789, 1890, 1998, 2331, 2354, 2799 |
| CviQI | GTAC | 6 cut(s) | 1789, 1890, 1998, 2331, 2354, 2799 |
| DraIII | CACNNNGTG | 1 cut(s) | 1460 |
| EaeI | YGGCCR | 1 cut(s) | 1356 |
| Eam1104I | CTCTTC | 2 cut(s) | 2388, 2889 |
| EarI | CTCTTC | 2 cut(s) | 2388, 2889 |
| Eco130I | CCWWGG | 1 cut(s) | 359 |
| Eco147I | AGGCCT | 1 cut(s) | 1116 |
| Eco31I | GGTCTC | 1 cut(s) | 2485 |
| Eco32I | GATATC | 2 cut(s) | 781, 1990 |
| Eco47I | GGWCC | 2 cut(s) | 2489, 2883 |
| Eco57I | CTGAAG | 3 cut(s) | 267, 1416, 2099 |
| Eco81I | CCTNAGG | 1 cut(s) | 1691 |
| Eco88I | CYCGRG | 2 cut(s) | 72, 1432 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2489, 2883 |
| EcoRI | GAATTC | 1 cut(s) | 422 |
| EcoRII | CCWGG | 1 cut(s) | 93 |
| EcoRV | GATATC | 2 cut(s) | 781, 1990 |
| EcoT14I | CCWWGG | 1 cut(s) | 359 |
| EcoT22I | ATGCAT | 1 cut(s) | 1494 |
| ErhI | CCWWGG | 1 cut(s) | 359 |
| Esp3I | CGTCTC | 1 cut(s) | 2645 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 335, 367, 827, 859 |
| FaqI | GGGAC | 1 cut(s) | 2210 |
| FauI | CCCGC | 2 cut(s) | 703, 2559 |
| FauNDI | CATATG | 2 cut(s) | 1202, 1618 |
| FbaI | TGATCA | 1 cut(s) | 1468 |
| FblI | GTMKAC | 1 cut(s) | 657 |
| Fnu4HI | GCNGC | 5 cut(s) | 206, 680, 915, 1128, 2831 |
| FokI | GGATG | 5 cut(s) | 77, 455, 548, 899, 1366 |
| Fsp4HI | GCNGC | 5 cut(s) | 206, 680, 915, 1128, 2831 |
| FspBI | CTAG | 4 cut(s) | 414, 419, 2219, 2426 |
| FspI | TGCGCA | 2 cut(s) | 1670, 2745 |
| GlaI | GCGC | 6 cut(s) | 287, 1670, 1979, 2126, 2745, 2838 |
| GluI | GCNGC | 5 cut(s) | 206, 680, 915, 1128, 2831 |
| GsuI | CTGGAG | 3 cut(s) | 1548, 1568, 2906 |
| HaeIII | GGCC | 2 cut(s) | 1116, 1358 |
| HapII | CCGG | 4 cut(s) | 2342, 2644, 2891, 2948 |
| HhaI | GCGC | 6 cut(s) | 288, 1671, 1980, 2127, 2746, 2839 |
| Hin6I | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2744, 2837 |
| HinP1I | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2744, 2837 |
| HincII | GTYRAC | 2 cut(s) | 138, 2661 |
| HindII | GTYRAC | 2 cut(s) | 138, 2661 |
| HindIII | AAGCTT | 1 cut(s) | 2693 |
| HpaI | GTTAAC | 2 cut(s) | 138, 2661 |
| HpaII | CCGG | 4 cut(s) | 2342, 2644, 2891, 2948 |
| HphI | GGTGA | 7 cut(s) | 680, 980, 1472, 1477, 1594, 1634, 2516 |
| Hpy166II | GTNNAC | 4 cut(s) | 138, 388, 658, 2661 |
| Hpy8I | GTNNAC | 4 cut(s) | 138, 388, 658, 2661 |
| HpyAV | CCTTC | 4 cut(s) | 504, 1054, 2600, 2918 |
| HpyCH4III | ACNGT | 7 cut(s) | 878, 1556, 1713, 1833, 1928, 2408, 2798 |
| HpyCH4IV | ACGT | 2 cut(s) | 1282, 1892 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 211, 220, 959, 1040, 1584, 1756, 2572, 2836 |
| HpySE526I | ACGT | 2 cut(s) | 1282, 1892 |
| HspAI | GCGC | 6 cut(s) | 286, 1669, 1978, 2125, 2744, 2837 |
| Kpn2I | TCCGGA | 2 cut(s) | 2643, 2947 |
| Ksp22I | TGATCA | 1 cut(s) | 1468 |
| KspAI | GTTAAC | 2 cut(s) | 138, 2661 |
| LmnI | GCTCC | 3 cut(s) | 23, 2110, 2612 |
| Lsp1109I | GCAGC | 5 cut(s) | 217, 691, 926, 1114, 2817 |
| LweI | GCATC | 9 cut(s) | 160, 232, 433, 877, 971, 1645, 2004, 2497, 2889 |
| MaeI | CTAG | 4 cut(s) | 414, 419, 2219, 2426 |
| MaeII | ACGT | 2 cut(s) | 1282, 1892 |
| MaeIII | GTNAC | 9 cut(s) | 106, 756, 878, 937, 1460, 1556, 2057, 2408, 2597 |
| MfeI | CAATTG | 1 cut(s) | 1815 |
| MflI | RGATCY | 5 cut(s) | 348, 1066, 1363, 2041, 2534 |
| MlyI | GAGTC | 4 cut(s) | 804, 917, 1553, 2966 |
| MmeI | TCCRAC | 4 cut(s) | 1384, 2308, 2696, 2934 |
| Mph1103I | ATGCAT | 1 cut(s) | 1494 |
| MroI | TCCGGA | 2 cut(s) | 2643, 2947 |
| MroXI | GAANNNNTTC | 1 cut(s) | 839 |
| MslI | CAYNNNNRTG | 1 cut(s) | 885 |
| MspA1I | CMGCKG | 2 cut(s) | 208, 1394 |
| MspCI | CTTAAG | 1 cut(s) | 892 |
| MspI | CCGG | 4 cut(s) | 2342, 2644, 2891, 2948 |
| MspR9I | CCNGG | 2 cut(s) | 95, 2342 |
| MunI | CAATTG | 1 cut(s) | 1815 |
| MvaI | CCWGG | 1 cut(s) | 95 |
| MvnI | CGCG | 2 cut(s) | 698, 2127 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 211, 220, 959, 1040, 1584, 1756, 2572, 2836 |
| NciI | CCSGG | 1 cut(s) | 2342 |
| NdeI | CATATG | 2 cut(s) | 1202, 1618 |
| NmeAIII | GCCGAG | 1 cut(s) | 1573 |
| NmuCI | GTSAC | 6 cut(s) | 106, 756, 878, 937, 1460, 1556 |
| NsbI | TGCGCA | 2 cut(s) | 1670, 2745 |
| NsiI | ATGCAT | 1 cut(s) | 1494 |
| NspI | RCATGY | 5 cut(s) | 1043, 1852, 2760, 2788, 2837 |
| NspV | TTCGAA | 1 cut(s) | 2556 |
| PacI | TTAATTAA | 1 cut(s) | 1971 |
| PaeI | GCATGC | 1 cut(s) | 2837 |
| PaeR7I | CTCGAG | 1 cut(s) | 1432 |
| PagI | TCATGA | 3 cut(s) | 2089, 2310, 2629 |
| PceI | AGGCCT | 1 cut(s) | 1116 |
| PciI | ACATGT | 3 cut(s) | 1848, 2756, 2784 |
| PdmI | GAANNNNTTC | 1 cut(s) | 839 |
| PfeI | GAWTC | 8 cut(s) | 578, 604, 1160, 1475, 1696, 2212, 2249, 2337 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2929 |
| PfoI | TCCNGGA | 1 cut(s) | 2340 |
| PkrI | GCNGC | 5 cut(s) | 207, 681, 916, 1129, 2832 |
| PleI | GAGTC | 4 cut(s) | 804, 916, 1553, 2965 |
| PpsI | GAGTC | 4 cut(s) | 804, 916, 1553, 2965 |
| PpuMI | RGGWCCY | 2 cut(s) | 2489, 2883 |
| PscI | ACATGT | 3 cut(s) | 1848, 2756, 2784 |
| PshAI | GACNNNNGTC | 1 cut(s) | 519 |
| Psp1406I | AACGTT | 1 cut(s) | 1282 |
| Psp5II | RGGWCCY | 2 cut(s) | 2489, 2883 |
| Psp6I | CCWGG | 1 cut(s) | 93 |
| PspGI | CCWGG | 1 cut(s) | 93 |
| PspPI | GGNCC | 2 cut(s) | 2489, 2883 |
| PspPPI | RGGWCCY | 2 cut(s) | 2489, 2883 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 144, 176, 857, 889 |
| PstI | CTGCAG | 2 cut(s) | 916, 2083 |
| PstNI | CAGNNNCTG | 1 cut(s) | 882 |
| PsuI | RGATCY | 5 cut(s) | 348, 1066, 1363, 2041, 2534 |
| PvuII | CAGCTG | 2 cut(s) | 208, 1394 |
| RsaI | GTAC | 6 cut(s) | 1790, 1891, 1999, 2332, 2355, 2800 |
| RsaNI | GTAC | 6 cut(s) | 1789, 1890, 1998, 2331, 2354, 2799 |
| RseI | CAYNNNNRTG | 1 cut(s) | 885 |
| SatI | GCNGC | 5 cut(s) | 206, 680, 915, 1128, 2831 |
| Sau96I | GGNCC | 2 cut(s) | 2489, 2883 |
| SchI | GAGTC | 4 cut(s) | 804, 917, 1553, 2966 |
| ScrFI | CCNGG | 2 cut(s) | 95, 2342 |
| SfaNI | GCATC | 9 cut(s) | 160, 232, 433, 877, 971, 1645, 2004, 2497, 2889 |
| SfcI | CTRYAG | 2 cut(s) | 912, 2079 |
| Sfr274I | CTCGAG | 1 cut(s) | 1432 |
| SfuI | TTCGAA | 1 cut(s) | 2556 |
| SinI | GGWCC | 2 cut(s) | 2489, 2883 |
| SlaI | CTCGAG | 1 cut(s) | 1432 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 885 |
| SmlI | CTYRAG | 4 cut(s) | 44, 812, 892, 1432 |
| SmoI | CTYRAG | 4 cut(s) | 44, 812, 892, 1432 |
| SpeI | ACTAGT | 1 cut(s) | 2218 |
| SphI | GCATGC | 1 cut(s) | 2837 |
| SseBI | AGGCCT | 1 cut(s) | 1116 |
| SsiI | CCGC | 3 cut(s) | 696, 2127, 2566 |
| SspI | AATATT | 2 cut(s) | 1168, 2158 |
| SspMI | CTAG | 4 cut(s) | 414, 419, 2219, 2426 |
| StuI | AGGCCT | 1 cut(s) | 1116 |
| StyD4I | CCNGG | 2 cut(s) | 93, 2340 |
| StyI | CCWWGG | 1 cut(s) | 359 |
| TaaI | ACNGT | 7 cut(s) | 878, 1556, 1713, 1833, 1928, 2408, 2798 |
| TaiI | ACGT | 2 cut(s) | 1285, 1895 |
| TaqI | TCGA | 9 cut(s) | 165, 581, 1270, 1419, 1433, 1930, 2263, 2556, 2778 |
| TatI | WGTACW | 2 cut(s) | 2353, 2798 |
| TfiI | GAWTC | 8 cut(s) | 578, 604, 1160, 1475, 1696, 2212, 2249, 2337 |
| TscAI | CASTG | 5 cut(s) | 115, 390, 887, 1561, 2827 |
| TseFI | GTSAC | 6 cut(s) | 106, 756, 878, 937, 1460, 1556 |
| TseI | GCWGC | 5 cut(s) | 205, 679, 914, 1127, 2830 |
| Tsp45I | GTSAC | 6 cut(s) | 106, 756, 878, 937, 1460, 1556 |
| TspDTI | ATGAA | 7 cut(s) | 79, 356, 415, 1593, 1625, 2141, 2618 |
| TspRI | CASTG | 5 cut(s) | 115, 390, 887, 1561, 2827 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2929 |
| Vha464I | CTTAAG | 1 cut(s) | 892 |
| VpaK11BI | GGWCC | 2 cut(s) | 2489, 2883 |
| XapI | RAATTY | 8 cut(s) | 302, 335, 422, 486, 719, 1637, 2552, 2803 |
| XceI | RCATGY | 5 cut(s) | 1043, 1852, 2760, 2788, 2837 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 616 |
| XhoI | CTCGAG | 1 cut(s) | 1432 |
| XmiI | GTMKAC | 1 cut(s) | 657 |
| XmnI | GAANNNNTTC | 1 cut(s) | 839 |
| XspI | CTAG | 4 cut(s) | 414, 419, 2219, 2426 |
| Zsp2I | ATGCAT | 1 cut(s) | 1494 |