MD11G1078100.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
6662372 .. 6666540
4169 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1078100.v1.1.491

Sequence Viewer

Length: 3705 bp
ATGGCGTTGGCGGTGGTAGGTGGAGCCGCTCTCTCGGGTTTCTTCCAGCAAGTATTTGTGAAGTTGGATTCTCAGGAGGTCAGAAACTTCATCAGAGGAAAGAAACTGACTGATGGGTTGCTCAAGAAGTTGAGGATCAAGTTGATGTCTGTTGGTGCTGTTTATGATGATGCCGAGCAAAAGCAATTACGTAACCCACATGTGAGGCTGTGGCTGCACGAGCTTAAAGAGGCAGTCCTTGATGCTGAGGACCTACTGGACGAGATCAAGACAGAAGCGTTGAGGCGGAAAATTGAAGCTGAATTTGGAAGTAGCACAAGCAAGGTACAAGACCTCATCTCTACTTCTTTGCATGCTTTTGATGAGTCTGTAGACAGCAAAATAGAGGAAATTCTTGAGAGGCTAAGCTTCATTGTAGAACAGAAAGATGCCCTTGATTTGAAAAGAGGTAGTAGACACAAAATCTCACAAACATTGCTTTCAACTTCTTTAGTAGAATGCTCTGATGTGTATGGAAGAGATCATGACAAGGAAACCATCATTCAATTGTTGCTATCAAATGATGTCTCTTGTAGTAAGATTGGCATTATTCCCATTGTGGGCATGGGTGGGATCGGAAAGACCACCCTTGCTCAGCTCTTATACAATGATGATAGAGTGAAGCAGCATTTTGAGCTCCAGGCATGGGTTTGTGTTTCTGATGAATTTGACGTTGTTAAGATCACACAAACAATTTATGCATCAGTCACTTCACGAACCTGTGACACCACAGACCTAAACCAGCTTCAGGTCAAACTCAAAGATGCTTTGGTGGGGAAGAAGTTTCTTTTTGTTCTTGATGATGTTTGGAACGAGAATTACAATATTTGGGATTCCTTAAAACGCCCCTTAGAGTCTGGAGCTCATGGAAGTAAGATCATTGTCACCGCACGGAATGATGGTGTTGCATCTACGATGGGTACTCTTCAAACCCACTATTTAAAGCACTTACTTGAGGAAGACTGTTGGTCTTTATTTGCAAACCATGCCTTCAAAGATGCAAGTGTTATTGTAGATCCAAATCTTGAGGTAATTGGAAGACAAATTGTTAGCAAGTGTAAAGGCCTTCCTTTAGCTGCAAAATCTCTCGGTGGTCTCTTACGCTCTGAACCAAATGTGGAGGAATGGGAAAATGTGCTAAAAAGTGACATATGGGAGTTGTCAGATGCAAAGATTGAAATTCTGCCGGCACTATGGCTAAGTTACCAGTACTTGTCTCCGGTGCTGAAGCGTTGTTTCGCTTATTGTTCAATATTTCCCAAAGATTATGAATTTGACAAGTTTGAATTAATTTTATTGTGGATGGCCGAAGATCTTTTACAACCCCAAAAGAAGACTAGGTTGGAAGATGTTGGAAAGAAATACTTTGATGATCTAATCTCACGGTCATTTTTTCAATACTCACCTTCAAATGATTGTTTCATCATGCATGATCTGATGCATGATTTGGCGACTTGCGTATGTGGGGAATTTTGCATTAGATTGGAAGACCATGACTTCTCATTGGACGTTGTGAGCAAGGGTCGTCATTTTTCTTATATGCAATATTCATCTAATGTTGATTTTGAGAGATGTGACACTATTTATGAAGCTAAGTATCTGCGCACCTTCATTCTTGGCGATCTCTATTCATTGCCAACAGTACGATTTGATCTCCTTGTAGTGCTACAGTGTTTAAGAGTTCTCAAACTACATGGGCATTATATCAAGGAGTTGCCTGATTCAATTAGCAACTTGAAGCATCTACGGTACCTCAACTTGTGTGGCAGTCCAATAAGGAAATTACCAGACACGGTATGCAGTTTGTATAATTTACAAACGTTGTTGCTGTCAAATTGTACATGTCTAGCTGAGTTGCCCACCAATTTGAGAAGACTTATCAACTTGCGCCATCTTGATTTGAGACGTACGAAAATAAGAAAGATGCCCCCCCACATGGGCAAGTTGAAAGATCTCCAAACATTTGGAGGTGAGTTTGTCTTGAGCAAAGATGTCGGGGGAAACATTGATGAGTTAAAGGGGTTTCAGCATTTGAGTGGAAATCTTCATATTTCAGGGCTTCAAAATATCACACGTGCTGAGGATGCTTTGGAGGCCAAACTGAGGGACAAGAAGCTCAGTGAAATACGTTTGAAATGGGAAGGTGACACTATTGATTCTGAAAACGATAGCCGAGTGCTAGGCAACTTGCAACCCAATACAAACCTAAAAGTATTGGCTATACAAGGATACGGAGGTACGAAGTTTCCAGGTTGGTTGGGAGATGAGTCTTTCTCTAATCTTGTCACTCTCCGACTTGAGACTTGTGGATATTGTTTCTCCCTGCCAGCATTGGGGCAGCTACCGTCTCTCAAAAGGCTTGAAATTGATGGGTTGAATGGAGTGGAATCAGTGGGGTCTGAGTTTTATGGGGGAATTAAACCTGCATTTAAATCTCTGGAGTTTCTGAGTTTCTGCAGTATGCGGGAATGGCAAGAGTGGTGTTTCCCTGGAGGCGGACATTTTCCTAATCTTTGCGAGCTTAGTCTGGGGAATTGTCCCAAACTAACGGGGAAAATACCGTTAGACTACTTCCCAAGACTTGAGCGGCTAAGTTTGCAGAACGTTAAAATCGTATATTTTGTGGGTGGTGGAGTGTTGCTTGCGCCCAACTTGTGGTCAGTGCCAGAAGATCTGCAAATCTCGCTCCCATCTCTTCAGTCTCTGTCCATAGAAGGGTGTAAAGAATTTAAATCATTTCCGGAAGAATCTAAATTCCCATCCCTCAAAAATTTGAAGATAAAGGAGTGCCCAGAATTTGTTGGTTTCCCCCATGGGGGAGGACTGCAAGCGCCCAACTTGAAGACGATGCAAATCAAAGAATGTAACAAATTCAGGTCACTGCCAGAGGAGATGCACGCTTCTCTCCCGTCCCTTCAGTGTCTGTCCATAGAAGGGTGTAAAGAATTTGTGGGTTTCCCCCATGGAGGAGGACTGCAAGCGCCCAACTTGAAGATGATGCAAATCAACGAATGTAACAAATTCAGGTCACTGCCAGAGGAGATGCAAATCTCTCTCCCGTCTCTCTCGTCTTTGTATATATGGGATTCTCCAGAATTGGAATCATTTCCGGAAGGGGGATTGCCGTCCAAATTGCGTTACCTCATTATCTGGTGTTGTAAAAAACTGATGGCAAACCGTATGCGGTGGGGTCTACAAACACTCACCTCTCTCAAATTCTTGGATGTCAGCTTCTCAGGATGTGAAGAAGAAGAAATTGTCGAATCATTTCCAGAAGAGGGGCTGCTGCCAATCACTCTCACTTCTCTCGGAATCTCCCATCATCCGAATCTGAAAACCATTGACGGCAAGGCGTTAAGACACATCATCTCTCTCGAGGAGTTGTATATTTGTTATTGTCCTCAACTCCAGAGCTTGCCAGATGAAGGGCTACCCACTTCTCTTTCTTTTCTACATATCACCGGGTCTGATTTGCTAACACAACGGTGTCAGAGAGACACAGGAGAAGATTGGCCCAAGATTTCTCACATCCCCAACGTACTCCTGTCCCATATAAACTTGAAAGTATTTGTGATAGAAAGATACGGAGCTACAAAAATTCCAAATCTGTTAGGAGATGACTCGTTCGTTCTCTCATCTTGTTACTCTTCGACTTATGGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1235

Amino Acids

139.36

Weight (kDa)

5.89

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 18 - 104 2.3e-16 Rx N-terminal domain
NB-ARC PF00931 175 - 346 5.9e-39 NB-ARC domain
WHD_DRP PF23559 431 - 497 1.2e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 568 - 860 3.5e-27 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 682 - 804 1.4e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1643
Acc36I ACCTGC 1 cut(s) 2470
Acc65I GGTACC 1 cut(s) 1788
AccB1I GGYRCC 1 cut(s) 1788
AccB7I CCANNNNNTGG 1 cut(s) 2694
AccBSI CCGCTC 2 cut(s) 29, 2626
AccI GTMKAC 3 cut(s) 372, 454, 3232
AccIII TCCGGA 2 cut(s) 2779, 3148
AciI CCGC 8 cut(s) 11, 27, 286, 927, 2503, 2535, 2626, 3223
AclI AACGTT 2 cut(s) 1859, 2643
AclWI GGATC 3 cut(s) 143, 620, 1049
AcoI YGGCCR 1 cut(s) 1344
AcuI CTGAAG 4 cut(s) 770, 1286, 2720, 2939
AcvI CACGTG 1 cut(s) 2114
AfaI GTAC 9 cut(s) 327, 961, 1250, 1683, 1790, 1879, 1948, 2278, 3579
AflIII ACRYGT 3 cut(s) 199, 1880, 2111
AhdI GACNNNNNGTC 1 cut(s) 1006
AjnI CCWGG 3 cut(s) 678, 2287, 2527
AjuI GAANNNNNNNTTGG 4 cut(s) 288, 320, 1364, 1396
AleI CACNNNNGTG 1 cut(s) 3523
Alw21I GWGCWC 2 cut(s) 678, 904
Alw26I GTCTC 9 cut(s) 571, 1139, 1260, 1936, 2333, 2391, 2745, 3105, 3528
AlwI GGATC 3 cut(s) 143, 620, 1049
AlwNI CAGNNNCTG 2 cut(s) 2743, 2962
Ama87I CYCGRG 2 cut(s) 34, 3413
Aor13HI TCCGGA 2 cut(s) 2779, 3148
AoxI GGCC 4 cut(s) 1102, 1344, 2133, 3551
ApeKI GCWGC 6 cut(s) 214, 664, 1115, 2377, 3322, 3325
AseI ATTAAT 1 cut(s) 1328
Asp700I GAANNNNTTC 2 cut(s) 3144, 3306
Asp718I GGTACC 1 cut(s) 1788
AspLEI GCGC 5 cut(s) 1644, 1929, 2686, 2872, 3022
AspS9I GGNCC 2 cut(s) 250, 3552
AsuC2I CCSGG 1 cut(s) 3502
AsuHPI GGTGA 6 cut(s) 916, 1434, 2021, 2195, 3235, 3490
AvaI CYCGRG 2 cut(s) 34, 3413
AvaII GGWCC 1 cut(s) 250
BaeGI GKGCMC 1 cut(s) 2831
BaeI ACNNNNGTAYC 2 cut(s) 2260, 2293
BanI GGYRCC 1 cut(s) 1788
BanII GRGCYC 2 cut(s) 678, 904
BarI GAAGNNNNNNTAC 2 cut(s) 1341, 1373
BauI CACGAG 1 cut(s) 218
BbrPI CACGTG 1 cut(s) 2114
BbsI GAAGAC 6 cut(s) 1005, 1084, 1379, 1533, 1918, 2888
Bbv12I GWGCWC 2 cut(s) 678, 904
BbvCI CCTCAGC 2 cut(s) 246, 2118
BbvI GCAGC 6 cut(s) 201, 676, 1102, 2389, 3309, 3312
BceAI ACGGC 2 cut(s) 3148, 3400
BcgI CGANNNNNNTGC 2 cut(s) 2014, 2048
BciT130I CCWGG 3 cut(s) 680, 2289, 2529
BciVI GTATCC 1 cut(s) 2261
BcnI CCSGG 1 cut(s) 3502
BcoDI GTCTC 9 cut(s) 571, 1139, 1260, 1936, 2333, 2391, 2745, 3105, 3528
BfaI CTAG 3 cut(s) 1377, 1886, 2219
BfmI CTRYAG 3 cut(s) 369, 1706, 2494
BfoI RGCGCY 2 cut(s) 2873, 3023
BfuAI ACCTGC 1 cut(s) 2470
BfuI GTATCC 1 cut(s) 2261
BglII AGATCT 3 cut(s) 1351, 1990, 2710
BisI GCNGC 8 cut(s) 27, 215, 665, 1116, 2378, 2627, 3323, 3326
BlpI GCTNAGC 2 cut(s) 404, 633
BlsI GCNGC 8 cut(s) 28, 216, 666, 1117, 2379, 2628, 3324, 3327
BmcAI AGTACT 1 cut(s) 1250
Bme1390I CCNGG 4 cut(s) 680, 2289, 2529, 3502
Bme18I GGWCC 1 cut(s) 250
BmeRI GACNNNNNGTC 1 cut(s) 1006
BmeT110I CYCGRG 2 cut(s) 34, 3413
BmgT120I GGNCC 2 cut(s) 250, 3552
BmiI GGNNCC 2 cut(s) 25, 1790
BmrFI CCNGG 4 cut(s) 680, 2289, 2529, 3502
BpiI GAAGAC 6 cut(s) 1005, 1084, 1379, 1533, 1918, 2888
BplI GAGNNNNNCTC 4 cut(s) 15, 47, 2297, 2329
BpmI CTGGAG 6 cut(s) 662, 918, 2498, 2550, 3114, 3431
Bpu10I CCTNAGC 2 cut(s) 246, 2118
Bpu1102I GCTNAGC 2 cut(s) 404, 633
BpuEI CTTGAG 7 cut(s) 107, 416, 1013, 1085, 2041, 2357, 2642
BpuMI CCSGG 1 cut(s) 3502
BsaAI YACGTR 2 cut(s) 191, 2114
BsaBI GATNNNNATC 4 cut(s) 1059, 2891, 3041, 3086
BsaI GGTCTC 1 cut(s) 1139
BsaJI CCNNGG 3 cut(s) 2527, 2851, 3001
BsaWI WCCGGW 3 cut(s) 1258, 2779, 3148
Bse118I RCCGGY 1 cut(s) 1225
Bse1I ACTGG 2 cut(s) 261, 1246
Bse3DI GCAATG 2 cut(s) 473, 1670
Bse8I GATNNNNATC 4 cut(s) 1059, 2891, 3041, 3086
BseAI TCCGGA 2 cut(s) 2779, 3148
BseBI CCWGG 3 cut(s) 680, 2289, 2529
BseDI CCNNGG 3 cut(s) 2527, 2851, 3001
BseGI GGATG 7 cut(s) 1347, 2128, 2798, 3268, 3284, 3361, 3567
BseJI GATNNNNATC 4 cut(s) 1059, 2891, 3041, 3086
BseMI GCAATG 2 cut(s) 473, 1670
BseNI ACTGG 2 cut(s) 261, 1246
BseRI GAGGAG 4 cut(s) 2942, 3021, 3092, 3431
BseSI GKGCMC 1 cut(s) 2831
BseXI GCAGC 6 cut(s) 201, 676, 1102, 2389, 3309, 3312
BsgI GTGCAG 1 cut(s) 200
BshFI GGCC 4 cut(s) 1104, 1346, 2135, 3553
BshNI GGYRCC 1 cut(s) 1788
BsiHKAI GWGCWC 2 cut(s) 678, 904
BsiHKCI CYCGRG 2 cut(s) 34, 3413
BsiSI CCGG 5 cut(s) 1226, 1259, 2780, 3149, 3501
BsiWI CGTACG 1 cut(s) 1946
BslFI GGGAC 4 cut(s) 2159, 2562, 2935, 3571
BsmAI GTCTC 9 cut(s) 571, 1139, 1260, 1936, 2333, 2391, 2745, 3105, 3528
BsmBI CGTCTC 3 cut(s) 1936, 2391, 3105
BsmFI GGGAC 4 cut(s) 2159, 2562, 2935, 3571
BsmI GAATGC 1 cut(s) 503
BsnI GGCC 4 cut(s) 1104, 1346, 2135, 3553
Bso31I GGTCTC 1 cut(s) 1139
BsoBI CYCGRG 2 cut(s) 34, 3413
Bsp1286I GDGCHC 3 cut(s) 678, 904, 2831
Bsp13I TCCGGA 2 cut(s) 2779, 3148
Bsp1407I TGTACA 1 cut(s) 1877
Bsp1720I GCTNAGC 2 cut(s) 404, 633
Bsp19I CCATGG 2 cut(s) 2851, 3001
BspACI CCGC 8 cut(s) 11, 27, 286, 927, 2503, 2535, 2626, 3223
BspANI GGCC 4 cut(s) 1104, 1346, 2135, 3553
BspEI TCCGGA 2 cut(s) 2779, 3148
BspHI TCATGA 1 cut(s) 523
BspLI GGNNCC 2 cut(s) 25, 1790
BspMAI CTGCAG 1 cut(s) 2498
BspMI ACCTGC 1 cut(s) 2470
BspPI GGATC 3 cut(s) 143, 620, 1049
BspT107I GGYRCC 1 cut(s) 1788
BspTNI GGTCTC 1 cut(s) 1139
BsrBI CCGCTC 2 cut(s) 29, 2626
BsrDI GCAATG 2 cut(s) 473, 1670
BsrFI RCCGGY 1 cut(s) 1225
BsrGI TGTACA 1 cut(s) 1877
BsrI ACTGG 2 cut(s) 261, 1246
BssAI RCCGGY 1 cut(s) 1225
BssECI CCNNGG 3 cut(s) 2527, 2851, 3001
BssSI CACGAG 1 cut(s) 218
BssT1I CCWWGG 2 cut(s) 2851, 3001
Bst2BI CACGAG 1 cut(s) 218
Bst2UI CCWGG 3 cut(s) 680, 2289, 2529
Bst6I CTCTTC 5 cut(s) 511, 969, 2739, 3309, 3691
BstAPI GCANNNNNTGC 1 cut(s) 1025
BstAUI TGTACA 1 cut(s) 1877
BstBAI YACGTR 2 cut(s) 191, 2114
BstC8I GCNNGC 9 cut(s) 354, 1227, 2367, 2558, 2682, 2868, 2937, 3018, 3455
BstDSI CCRYGG 2 cut(s) 2851, 3001
BstF5I GGATG 7 cut(s) 1347, 2128, 2798, 3268, 3284, 3361, 3567
BstH2I RGCGCY 2 cut(s) 2873, 3023
BstHHI GCGC 5 cut(s) 1644, 1929, 2686, 2872, 3022
BstMAI GTCTC 9 cut(s) 571, 1139, 1260, 1936, 2333, 2391, 2745, 3105, 3528
BstMWI GCNNNNNNNGC 9 cut(s) 214, 220, 673, 1025, 2123, 2132, 2509, 2635, 2722
BstNI CCWGG 3 cut(s) 680, 2289, 2529
BstNSI RCATGY 3 cut(s) 203, 356, 1884
BstSCI CCNGG 4 cut(s) 678, 2287, 2527, 3500
BstSFI CTRYAG 3 cut(s) 369, 1706, 2494
BstSLI GKGCMC 1 cut(s) 2831
BstSNI TACGTA 1 cut(s) 191
BstV1I GCAGC 6 cut(s) 201, 676, 1102, 2389, 3309, 3312
BstV2I GAAGAC 6 cut(s) 1005, 1084, 1379, 1533, 1918, 2888
BstX2I RGATCY 4 cut(s) 1054, 1351, 1990, 2710
BstXI CCANNNNNNTGG 1 cut(s) 2003
BstYI RGATCY 4 cut(s) 1054, 1351, 1990, 2710
BsuI GTATCC 1 cut(s) 2261
BsuRI GGCC 4 cut(s) 1104, 1346, 2135, 3553
BtgI CCRYGG 2 cut(s) 2851, 3001
BtsCI GGATG 7 cut(s) 1347, 2128, 2798, 3268, 3284, 3361, 3567
BtsI GCAGTG 2 cut(s) 2918, 3068
BtsIMutI CAGTG 7 cut(s) 1715, 2164, 2436, 2706, 2918, 2963, 3068
BveI ACCTGC 1 cut(s) 2470
Cac8I GCNNGC 9 cut(s) 354, 1227, 2367, 2558, 2682, 2868, 2937, 3018, 3455
CaiI CAGNNNCTG 2 cut(s) 2743, 2962
CciI TCATGA 1 cut(s) 523
CfoI GCGC 5 cut(s) 1644, 1929, 2686, 2872, 3022
Cfr10I RCCGGY 1 cut(s) 1225
Cfr13I GGNCC 2 cut(s) 250, 3552
Csp6I GTAC 9 cut(s) 326, 960, 1249, 1682, 1789, 1878, 1947, 2277, 3578
CspCI CAANNNNNGTGG 2 cut(s) 1783, 1818
CviQI GTAC 9 cut(s) 326, 960, 1249, 1682, 1789, 1878, 1947, 2277, 3578
DraI TTTAAA 3 cut(s) 981, 2470, 2770
DriI GACNNNNNGTC 1 cut(s) 1006
EaeI YGGCCR 1 cut(s) 1344
Eam1104I CTCTTC 5 cut(s) 511, 969, 2739, 3309, 3691
Eam1105I GACNNNNNGTC 1 cut(s) 1006
EarI CTCTTC 5 cut(s) 511, 969, 2739, 3309, 3691
EciI GGCGGA 2 cut(s) 301, 2550
Ecl136II GAGCTC 2 cut(s) 676, 902
Eco105I TACGTA 1 cut(s) 191
Eco130I CCWWGG 2 cut(s) 2851, 3001
Eco147I AGGCCT 1 cut(s) 1104
Eco24I GRGCYC 2 cut(s) 678, 904
Eco31I GGTCTC 1 cut(s) 1139
Eco47I GGWCC 1 cut(s) 250
Eco53kI GAGCTC 2 cut(s) 676, 902
Eco57I CTGAAG 4 cut(s) 770, 1286, 2720, 2939
Eco72I CACGTG 1 cut(s) 2114
Eco88I CYCGRG 2 cut(s) 34, 3413
EcoICRI GAGCTC 2 cut(s) 676, 902
EcoO109I RGGNCCY 1 cut(s) 250
EcoRII CCWGG 3 cut(s) 678, 2287, 2527
EcoT14I CCWWGG 2 cut(s) 2851, 3001
EcoT22I ATGCAT 3 cut(s) 742, 1470, 1482
EcoT38I GRGCYC 2 cut(s) 678, 904
ErhI CCWWGG 2 cut(s) 2851, 3001
Esp3I CGTCTC 3 cut(s) 1936, 2391, 3105
FalI AAGNNNNNCTT 4 cut(s) 417, 449, 1388, 1420
FaqI GGGAC 4 cut(s) 2159, 2562, 2935, 3571
FauI CCCGC 1 cut(s) 2496
FauNDI CATATG 1 cut(s) 1190
FblI GTMKAC 3 cut(s) 372, 454, 3232
Fnu4HI GCNGC 8 cut(s) 27, 215, 665, 1116, 2378, 2627, 3323, 3326
FokI GGATG 7 cut(s) 1354, 2135, 2785, 3275, 3291, 3348, 3554
FriOI GRGCYC 2 cut(s) 678, 904
Fsp4HI GCNGC 8 cut(s) 27, 215, 665, 1116, 2378, 2627, 3323, 3326
FspBI CTAG 3 cut(s) 1377, 1886, 2219
FspI TGCGCA 1 cut(s) 1643
GlaI GCGC 5 cut(s) 1643, 1928, 2685, 2871, 3021
GluI GCNGC 8 cut(s) 27, 215, 665, 1116, 2378, 2627, 3323, 3326
GsuI CTGGAG 6 cut(s) 662, 918, 2498, 2550, 3114, 3431
HaeII RGCGCY 2 cut(s) 2873, 3023
HaeIII GGCC 4 cut(s) 1104, 1346, 2135, 3553
HapII CCGG 5 cut(s) 1226, 1259, 2780, 3149, 3501
HhaI GCGC 5 cut(s) 1644, 1929, 2686, 2872, 3022
Hin6I GCGC 5 cut(s) 1642, 1927, 2684, 2870, 3020
HinP1I GCGC 5 cut(s) 1642, 1927, 2684, 2870, 3020
HindIII AAGCTT 1 cut(s) 406
HpaII CCGG 5 cut(s) 1226, 1259, 2780, 3149, 3501
HphI GGTGA 6 cut(s) 916, 1434, 2021, 2195, 3235, 3490
Hpy166II GTNNAC 3 cut(s) 373, 455, 3233
Hpy8I GTNNAC 3 cut(s) 373, 455, 3233
HpyCH4IV ACGT 9 cut(s) 190, 711, 1548, 1859, 1945, 2113, 2167, 2643, 3576
HpyF10VI GCNNNNNNNGC 9 cut(s) 214, 220, 673, 1025, 2123, 2132, 2509, 2635, 2722
HpySE526I ACGT 9 cut(s) 190, 711, 1548, 1859, 1945, 2113, 2167, 2643, 3576
HspAI GCGC 5 cut(s) 1642, 1927, 2684, 2870, 3020
Kpn2I TCCGGA 2 cut(s) 2779, 3148
KpnI GGTACC 1 cut(s) 1792
KroI GCCGGC 1 cut(s) 1225
KroNI GCCGGC 1 cut(s) 1227
LmnI GCTCC 5 cut(s) 23, 681, 899, 2730, 3626
Lsp1109I GCAGC 6 cut(s) 201, 676, 1102, 2389, 3309, 3312
MaeI CTAG 3 cut(s) 1377, 1886, 2219
MaeII ACGT 9 cut(s) 190, 711, 1548, 1859, 1945, 2113, 2167, 2643, 3576
MbiI CCGCTC 2 cut(s) 29, 2626
MfeI CAATTG 1 cut(s) 545
MflI RGATCY 4 cut(s) 1054, 1351, 1990, 2710
MhlI GDGCHC 3 cut(s) 678, 904, 2831
MlyI GAGTC 4 cut(s) 374, 902, 2315, 3653
MmeI TCCRAC 4 cut(s) 45, 1362, 1372, 2356
Mph1103I ATGCAT 3 cut(s) 742, 1470, 1482
MroI TCCGGA 2 cut(s) 2779, 3148
MroNI GCCGGC 1 cut(s) 1225
MroXI GAANNNNTTC 2 cut(s) 3144, 3306
MslI CAYNNNNRTG 2 cut(s) 2073, 3523
MspI CCGG 5 cut(s) 1226, 1259, 2780, 3149, 3501
MspR9I CCNGG 4 cut(s) 680, 2289, 2529, 3502
MunI CAATTG 1 cut(s) 545
Mva1269I GAATGC 1 cut(s) 503
MvaI CCWGG 3 cut(s) 680, 2289, 2529
MwoI GCNNNNNNNGC 9 cut(s) 214, 220, 673, 1025, 2123, 2132, 2509, 2635, 2722
NaeI GCCGGC 1 cut(s) 1227
NciI CCSGG 1 cut(s) 3502
NcoI CCATGG 2 cut(s) 2851, 3001
NdeI CATATG 1 cut(s) 1190
NgoMIV GCCGGC 1 cut(s) 1225
NlaIV GGNNCC 2 cut(s) 25, 1790
NmeAIII GCCGAG 2 cut(s) 199, 2237
NmuCI GTSAC 9 cut(s) 745, 761, 922, 1184, 1613, 2183, 2323, 2916, 3066
NsbI TGCGCA 1 cut(s) 1643
NsiI ATGCAT 3 cut(s) 742, 1470, 1482
NspI RCATGY 3 cut(s) 203, 356, 1884
OliI CACNNNNGTG 1 cut(s) 3523
PaeI GCATGC 1 cut(s) 356
PaeR7I CTCGAG 1 cut(s) 3413
PagI TCATGA 1 cut(s) 523
PceI AGGCCT 1 cut(s) 1104
PciI ACATGT 2 cut(s) 199, 1880
PcsI WCGNNNNNNNCGW 1 cut(s) 2649
PctI GAATGC 1 cut(s) 503
PdiI GCCGGC 1 cut(s) 1227
PdmI GAANNNNTTC 2 cut(s) 3144, 3306
Pfl23II CGTACG 1 cut(s) 1946
PflMI CCANNNNNTGG 1 cut(s) 2694
PkrI GCNGC 8 cut(s) 28, 216, 666, 1117, 2379, 2628, 3324, 3327
PleI GAGTC 4 cut(s) 373, 901, 2314, 3653
PmaCI CACGTG 1 cut(s) 2114
PmlI CACGTG 1 cut(s) 2114
PpsI GAGTC 4 cut(s) 373, 901, 2314, 3653
Ppu21I YACGTR 2 cut(s) 191, 2114
PpuMI RGGWCCY 1 cut(s) 250
PscI ACATGT 2 cut(s) 199, 1880
PshBI ATTAAT 1 cut(s) 1328
Psp124BI GAGCTC 2 cut(s) 678, 904
Psp1406I AACGTT 2 cut(s) 1859, 2643
Psp5II RGGWCCY 1 cut(s) 250
Psp6I CCWGG 3 cut(s) 678, 2287, 2527
PspCI CACGTG 1 cut(s) 2114
PspGI CCWGG 3 cut(s) 678, 2287, 2527
PspLI CGTACG 1 cut(s) 1946
PspN4I GGNNCC 2 cut(s) 25, 1790
PspPI GGNCC 2 cut(s) 250, 3552
PspPPI RGGWCCY 1 cut(s) 250
PsrI GAACNNNNNNTAC 2 cut(s) 842, 874
PstI CTGCAG 1 cut(s) 2498
PstNI CAGNNNCTG 2 cut(s) 2743, 2962
PsuI RGATCY 4 cut(s) 1054, 1351, 1990, 2710
RsaI GTAC 9 cut(s) 327, 961, 1250, 1683, 1790, 1879, 1948, 2278, 3579
RsaNI GTAC 9 cut(s) 326, 960, 1249, 1682, 1789, 1878, 1947, 2277, 3578
RseI CAYNNNNRTG 2 cut(s) 2073, 3523
SacI GAGCTC 2 cut(s) 678, 904
SatI GCNGC 8 cut(s) 27, 215, 665, 1116, 2378, 2627, 3323, 3326
Sau96I GGNCC 2 cut(s) 250, 3552
ScaI AGTACT 1 cut(s) 1250
SchI GAGTC 4 cut(s) 374, 902, 2315, 3653
ScrFI CCNGG 4 cut(s) 680, 2289, 2529, 3502
SduI GDGCHC 3 cut(s) 678, 904, 2831
SfcI CTRYAG 3 cut(s) 369, 1706, 2494
Sfr274I CTCGAG 1 cut(s) 3413
SinI GGWCC 1 cut(s) 250
SlaI CTCGAG 1 cut(s) 3413
SmiI ATTTAAAT 2 cut(s) 2470, 2770
SmiMI CAYNNNNRTG 2 cut(s) 2073, 3523
SmlI CTYRAG 8 cut(s) 122, 395, 992, 1064, 2020, 2336, 2621, 3413
SmoI CTYRAG 8 cut(s) 122, 395, 992, 1064, 2020, 2336, 2621, 3413
SnaBI TACGTA 1 cut(s) 191
SphI GCATGC 1 cut(s) 356
SseBI AGGCCT 1 cut(s) 1104
SsiI CCGC 8 cut(s) 11, 27, 286, 927, 2503, 2535, 2626, 3223
SspI AATATT 3 cut(s) 865, 1293, 1586
SspMI CTAG 3 cut(s) 1377, 1886, 2219
SstI GAGCTC 2 cut(s) 678, 904
StuI AGGCCT 1 cut(s) 1104
StyD4I CCNGG 4 cut(s) 678, 2287, 2527, 3500
StyI CCWWGG 2 cut(s) 2851, 3001
SwaI ATTTAAAT 2 cut(s) 2470, 2770
TaiI ACGT 9 cut(s) 193, 714, 1551, 1862, 1948, 2116, 2170, 2646, 3579
TaqI TCGA 3 cut(s) 3300, 3414, 3689
TatI WGTACW 2 cut(s) 1248, 1877
TauI GCSGC 2 cut(s) 29, 2629
TscAI CASTG 7 cut(s) 1715, 2164, 2436, 2706, 2925, 2963, 3075
TseFI GTSAC 9 cut(s) 745, 761, 922, 1184, 1613, 2183, 2323, 2916, 3066
TseI GCWGC 6 cut(s) 214, 664, 1115, 2377, 3322, 3325
Tsp45I GTSAC 9 cut(s) 745, 761, 922, 1184, 1613, 2183, 2323, 2916, 3066
TspGWI ACGGA 3 cut(s) 946, 2286, 3639
TspRI CASTG 7 cut(s) 1715, 2164, 2436, 2706, 2925, 2963, 3075
Van91I CCANNNNNTGG 1 cut(s) 2694
VpaK11BI GGWCC 1 cut(s) 250
VspI ATTAAT 1 cut(s) 1328
XceI RCATGY 3 cut(s) 203, 356, 1884
XcmI CCANNNNNNNNNTGG 1 cut(s) 601
XhoI CTCGAG 1 cut(s) 3413
XmiI GTMKAC 3 cut(s) 372, 454, 3232
XmnI GAANNNNTTC 2 cut(s) 3144, 3306
XspI CTAG 3 cut(s) 1377, 1886, 2219
ZrmI AGTACT 1 cut(s) 1250
Zsp2I ATGCAT 3 cut(s) 742, 1470, 1482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.