Rroxscaffold_1G00041920

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
59912322 .. 59944306
31985 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00041920.1

Sequence Viewer

Length: 2454 bp
ATGGCTCTGGAAGTTGTGGGTGGAGCTTTTCTCTCTTCTGCTCTTGCTGTTCTGTTTGATAGGATGGCTTCCCGTCCGGTTGTTGACTTCATCCGAGGAAAGAAGACCACCGCTGGGCTGCTCCACAAGTTGAAGATGAAATTGTTGTCGGTTAATAAGTTGCTTGATGATGCAGAGGAGAAGCAACTCAGAAACTCTAGAGTCAGGGATTGGCTTATTGAGCTTAAAGATGTTCTCTATCATGCCGATGACCTGTTGGATGAAATCAAGACTGAAGCTCTGCGTTGCAAGATGGAACAAGAAGATTCTGGAAGCCTCAGCACAAATCAGGTACTCAAGTTTAGTTCTATTTCCATTCATGAACTTGACGAAAGCCTGGAACCCAAGATCCTGGAGATTCTTGAAAGATTAGAACTGATTGTCAACGAAAAAGATGTGCTTGATCTGAAAGAGGGTGTTAAATATAGACCACAAGGAAGACTGCCCACAACTTCTTTGGTAGAAGTGTCCAGTGTATATGGAAGGGATGAAGAAAAGGAGGCCATTATCAAGTTATTGTTAGCGGATGGTATGACTGGAAATAAGATAGATGTGCTTCCAATTGTGGGCATGGGTGGGCTTGGAAAGACCACTCTTGCTCAACTCGTATACAACGATGGCAGAGTCAAGCAACATTTTGTCCATCAATCATGGTCTTGTGTTTCAGTAGAATTTGATGTTATCAAAATAACACAGACATTTTATGGGGCGGTCACTTCACAAACTTGTAATATCACAGACCTAAACATGCTTCAAGTTAAACTAAAGGAGACGTTGTCAGGGAAGAAATTTCTCTTTGTTCTTGATGATGTTTGGACTGTGACTAATGACGAGTGGGATCTCTTAAGCCGACCCTTTGAGAGTGGAGGTCATGGAAGTAAGATCATTGTCACAACACGTCATGAAGATGTTGCAGGCATTATAGGTACCCTTCAAAGTCAACATCTAATGCAACTATCTGAGGAAAACTGCTGGTCGTTGTTCTCAAAACATGCCTTCAAGAATGCAGGTGTTACTGCAGATCTGTCGCTTGAAGTGATTGGAAAACAGATTGCTCAAAAGTGTAAAGGACTCCCTTTAGCTGCAAAATCACTTGGGGGTCTTTTACGTTCTGAACCAAATATTGAGAAATGGGAAGAAGTGTTGAACAATGACATATGGGAGTTGCTAGATAAAAACAATGGCATTTTGCCAGCTCTATGGTTTAGCTACCATTATCTACCTCCGCATCTGAAGCGTTGTTTTGCTTACTGTTCCATATTTCCTCAAGATTATGAGTTTCTCAAACCGGATCTGGTGTTGCTGTGGATGGCTGAAGATTTCTTACCGTCGAAATCGAAGACTACATTAGAACAAGTCGGAGAGAACTACTTTGATGATCTAGTGTCAAGGTCATTTTTTCAACATGTACCTAATCACTTTCGTGGTGAGGCAGTTTTCACAATGCATGACCTTATCCATGACTTAGCAAACTTTGTCTCTGGAGAGTTCTGTGTTAGGTTGGAGAACAATGACTCAGTATTGGAAAATGTCCGCAAGAGTCGCCACTTTTCGTATATGGATGCATCTACCGTAATTGATCAATGGGACAGTTTGTGTGAAGCCAAGTATTTGCGAACCTTTCCAGTATCAGCATATCGGTACCCACGTCCCGACTTAGATTTTGATATATTCCTGAAGCTTCAGTGTTTAAGAGTGCTCAATTTATCAAGTTACGAAATTGGTGAGCTGCCTAGTTCAATTAGCAAGTTGAAGCATCTAAGGCACTTTGACTTGTCTGGCACATCAATTAAAAAGTTACCTGATGAAATGTGTACTTTATATAATTTACAGACGTTATTGTTGTCGTATTGTAGAGATCTAGTTGAGTTGCCAACTGATTTGGGAAGATTAATCAACTTGCGTCATCTTGATATTGAAGGCACAAAGATAGAAAAGATGCCACCAAGGATGGGCAAAATGAAAGATCTCCAAACAATAAGAGGTGAGTTCGTCCTAGACAAATACACTGGCGGTAACATTGTCGAGATTAAAGGGCTTCAGCAGTTGCGCGGAACACTATGCATCTCGGGGCTTCGCAATATTGTGCATGTCACAGATGCCTTGGAGACCAATATCAGGAAGAAGTATTTGGATAAATTAGTTTTGGAATGGGGAGGCAAGTCTGGTGACACGGACGATACGCAAAAAGATAGAGATGTGCTGGAGAACCTCCAACCTCATACAAACCTAAAAAACTCGAGATTCGATCTTATGGCGGCACAAGATTTCCAGGTTGGTTGGAAGATCTTTCTAGTTTATCGAATCTGGTTCGTCTTCAACTTCTGGATTGCGGAAATTGTTTGTCCTTGCCATCAGTTGAGCAGCTACCCTCCCTCCAAAAGCTTGAGATTGAAGGATTTAATGGAGTGGTGA

Protein Analysis

817

Amino Acids

93.38

Weight (kDa)

5.88

Isoelectric Point (pI)

38.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 101 2e-17 Rx N-terminal domain
NB-ARC PF00931 177 - 348 1.5e-34 NB-ARC domain
WHD_DRP PF23559 433 - 503 4.8e-26 Disease resistance protein Winged helix domain
LRR_14 PF23598 564 - 630 1.6e-10 Leucine-rich repeat region
LRR_14 PF23598 573 - 697 4.7e-17 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 687 - 759 3.2e-15 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1037
Acc36I ACCTGC 1 cut(s) 1037
Acc65I GGTACC 2 cut(s) 965, 1680
AccB1I GGYRCC 2 cut(s) 965, 1680
AccI GTMKAC 1 cut(s) 648
AccII CGCG 1 cut(s) 2091
AciI CCGC 9 cut(s) 111, 563, 749, 1265, 1573, 2052, 2091, 2297, 2372
AclWI GGATC 3 cut(s) 382, 885, 1338
AcsI RAATTY 2 cut(s) 710, 827
AcuI CTGAAG 6 cut(s) 294, 1292, 1374, 1706, 1736, 2063
AfaI GTAC 5 cut(s) 333, 967, 1449, 1682, 1855
AfiI CCNNNNNNNGG 4 cut(s) 114, 605, 1991, 2157
AflII CTTAAG 1 cut(s) 883
AflIII ACRYGT 2 cut(s) 935, 1444
AjiI CACGTC 2 cut(s) 938, 1688
AjnI CCWGG 3 cut(s) 375, 390, 2310
AjuI GAANNNNNNNTTGG 2 cut(s) 2153, 2185
AleI CACNNNNGTG 1 cut(s) 1461
AloI GAACNNNNNNTCC 2 cut(s) 372, 404
Alw21I GWGCWC 1 cut(s) 1740
Alw26I GTCTC 3 cut(s) 803, 1522, 2141
AlwI GGATC 3 cut(s) 382, 885, 1338
Ama87I CYCGRG 2 cut(s) 2107, 2278
AoxI GGCC 1 cut(s) 540
ApeKI GCWGC 4 cut(s) 118, 1121, 1768, 2403
ApoI RAATTY 2 cut(s) 710, 827
ArsI GACNNNNNNTTYG 2 cut(s) 1685, 1717
AseI ATTAAT 1 cut(s) 1931
Asp718I GGTACC 2 cut(s) 965, 1680
AspLEI GCGC 1 cut(s) 2091
AsuHPI GGTGA 4 cut(s) 1478, 1775, 2036, 2219
AvaI CYCGRG 2 cut(s) 2107, 2278
BaeI ACNNNNGTAYC 4 cut(s) 323, 356, 1672, 1705
BanI GGYRCC 2 cut(s) 965, 1680
BarI GAAGNNNNNNTAC 2 cut(s) 1347, 1379
BbsI GAAGAC 4 cut(s) 110, 484, 1385, 2347
Bbv12I GWGCWC 1 cut(s) 1740
BbvCI CCTCAGC 1 cut(s) 317
BbvI GCAGC 4 cut(s) 105, 1108, 1755, 2415
BccI CCATC 8 cut(s) 58, 286, 560, 650, 690, 1342, 1984, 2400
BcgI CGANNNNNNTGC 2 cut(s) 1047, 1081
BciT130I CCWGG 3 cut(s) 377, 392, 2312
BclI TGATCA 1 cut(s) 1618
BcoDI GTCTC 3 cut(s) 803, 1522, 2141
BfaI CTAG 7 cut(s) 198, 1208, 1421, 1773, 1901, 2036, 2333
BfmI CTRYAG 1 cut(s) 1056
BfrI CTTAAG 1 cut(s) 883
BfuAI ACCTGC 1 cut(s) 1037
BglII AGATCT 4 cut(s) 1060, 1897, 2005, 2325
BisI GCNGC 5 cut(s) 119, 1122, 1769, 2298, 2404
BlsI GCNGC 5 cut(s) 120, 1123, 1770, 2299, 2405
Bme1390I CCNGG 3 cut(s) 377, 392, 2312
BmeT110I CYCGRG 2 cut(s) 2107, 2278
BmgBI CACGTC 2 cut(s) 938, 1688
BmiI GGNNCC 3 cut(s) 381, 967, 1682
BmrFI CCNGG 3 cut(s) 377, 392, 2312
BmsI GCATC 8 cut(s) 160, 1276, 1591, 1613, 1804, 1968, 2112, 2128
BpiI GAAGAC 4 cut(s) 110, 484, 1385, 2347
BplI GAGNNNNNCTC 2 cut(s) 15, 47
BpmI CTGGAG 3 cut(s) 413, 1542, 2264
Bpu10I CCTNAGC 1 cut(s) 317
BpuEI CTTGAG 3 cut(s) 320, 1290, 2446
BsaI GGTCTC 1 cut(s) 2141
BsaJI CCNNGG 3 cut(s) 94, 1985, 2142
BsaWI WCCGGW 2 cut(s) 76, 1327
BsaXI ACNNNNNCTCC 4 cut(s) 800, 830, 2399, 2429
Bsc4I CCNNNNNNNGG 4 cut(s) 114, 605, 1991, 2157
Bse1I ACTGG 4 cut(s) 510, 580, 1664, 2053
BseBI CCWGG 3 cut(s) 377, 392, 2312
BseDI CCNNGG 3 cut(s) 94, 1985, 2142
BseGI GGATG 8 cut(s) 69, 90, 265, 532, 571, 1353, 1606, 1995
BseLI CCNNNNNNNGG 4 cut(s) 114, 605, 1991, 2157
BseMII CTCAG 4 cut(s) 202, 331, 990, 1569
BseNI ACTGG 4 cut(s) 510, 580, 1664, 2053
BseRI GAGGAG 1 cut(s) 191
BseXI GCAGC 4 cut(s) 105, 1108, 1755, 2415
BseYI CCCAGC 1 cut(s) 113
Bsh1236I CGCG 1 cut(s) 2091
BshFI GGCC 1 cut(s) 542
BshNI GGYRCC 2 cut(s) 965, 1680
BsiHKAI GWGCWC 1 cut(s) 1740
BsiHKCI CYCGRG 2 cut(s) 2107, 2278
BsiSI CCGG 2 cut(s) 77, 1328
BslFI GGGAC 2 cut(s) 1640, 1674
BslI CCNNNNNNNGG 4 cut(s) 114, 605, 1991, 2157
BsmAI GTCTC 3 cut(s) 803, 1522, 2141
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 2 cut(s) 1640, 1674
BsmI GAATGC 1 cut(s) 1048
BsnI GGCC 1 cut(s) 542
Bso31I GGTCTC 1 cut(s) 2141
BsoBI CYCGRG 2 cut(s) 2107, 2278
Bsp1286I GDGCHC 1 cut(s) 1740
BspACI CCGC 9 cut(s) 111, 563, 749, 1265, 1573, 2052, 2091, 2297, 2372
BspANI GGCC 1 cut(s) 542
BspCNI CTCAG 4 cut(s) 201, 330, 991, 1568
BspFNI CGCG 1 cut(s) 2091
BspHI TCATGA 2 cut(s) 358, 940
BspLI GGNNCC 3 cut(s) 381, 967, 1682
BspMAI CTGCAG 1 cut(s) 1060
BspMI ACCTGC 1 cut(s) 1037
BspPI GGATC 3 cut(s) 382, 885, 1338
BspT107I GGYRCC 2 cut(s) 965, 1680
BspTI CTTAAG 1 cut(s) 883
BspTNI GGTCTC 1 cut(s) 2141
BsrI ACTGG 4 cut(s) 510, 580, 1664, 2053
BssECI CCNNGG 3 cut(s) 94, 1985, 2142
BssNAI GTATAC 1 cut(s) 649
BssT1I CCWWGG 2 cut(s) 1985, 2142
Bst1107I GTATAC 1 cut(s) 649
Bst2UI CCWGG 3 cut(s) 377, 392, 2312
Bst4CI ACNGT 5 cut(s) 859, 1292, 1368, 1612, 1631
Bst6I CTCTTC 1 cut(s) 40
BstAFI CTTAAG 1 cut(s) 883
BstC8I GCNNGC 2 cut(s) 955, 1233
BstDEI CTNAG 7 cut(s) 188, 317, 999, 1504, 1555, 1696, 1799
BstF5I GGATG 8 cut(s) 69, 90, 265, 532, 571, 1353, 1606, 1995
BstFNI CGCG 1 cut(s) 2091
BstHHI GCGC 1 cut(s) 2091
BstMAI GTCTC 3 cut(s) 803, 1522, 2141
BstMWI GCNNNNNNNGC 4 cut(s) 220, 1273, 1581, 1801
BstNI CCWGG 3 cut(s) 377, 392, 2312
BstNSI RCATGY 4 cut(s) 790, 1034, 1448, 2132
BstSCI CCNGG 3 cut(s) 375, 390, 2310
BstSFI CTRYAG 1 cut(s) 1056
BstUI CGCG 1 cut(s) 2091
BstV1I GCAGC 4 cut(s) 105, 1108, 1755, 2415
BstV2I GAAGAC 4 cut(s) 110, 484, 1385, 2347
BstX2I RGATCY 7 cut(s) 387, 877, 1060, 1330, 1897, 2005, 2325
BstXI CCANNNNNNTGG 2 cut(s) 391, 1239
BstYI RGATCY 7 cut(s) 387, 877, 1060, 1330, 1897, 2005, 2325
BstZ17I GTATAC 1 cut(s) 649
BsuRI GGCC 1 cut(s) 542
BtrI CACGTC 2 cut(s) 938, 1688
BtsCI GGATG 8 cut(s) 69, 90, 265, 532, 571, 1353, 1606, 1995
BtsIMutI CAGTG 3 cut(s) 517, 1730, 2046
BveI ACCTGC 1 cut(s) 1037
Cac8I GCNNGC 2 cut(s) 955, 1233
CciI TCATGA 2 cut(s) 358, 940
CfoI GCGC 1 cut(s) 2091
CseI GACGC 1 cut(s) 1931
Csp6I GTAC 5 cut(s) 332, 966, 1448, 1681, 1854
CviQI GTAC 5 cut(s) 332, 966, 1448, 1681, 1854
DdeI CTNAG 7 cut(s) 188, 317, 999, 1504, 1555, 1696, 1799
Eam1104I CTCTTC 1 cut(s) 40
EarI CTCTTC 1 cut(s) 40
Eco130I CCWWGG 2 cut(s) 1985, 2142
Eco31I GGTCTC 1 cut(s) 2141
Eco57I CTGAAG 6 cut(s) 294, 1292, 1374, 1706, 1736, 2063
Eco88I CYCGRG 2 cut(s) 2107, 2278
EcoRII CCWGG 3 cut(s) 375, 390, 2310
EcoT14I CCWWGG 2 cut(s) 1985, 2142
EcoT22I ATGCAT 3 cut(s) 1488, 1606, 2105
ErhI CCWWGG 2 cut(s) 1985, 2142
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 2 cut(s) 423, 455
FaqI GGGAC 2 cut(s) 1640, 1674
FauNDI CATATG 1 cut(s) 1196
FbaI TGATCA 1 cut(s) 1618
FblI GTMKAC 1 cut(s) 648
Fnu4HI GCNGC 5 cut(s) 119, 1122, 1769, 2298, 2404
FokI GGATG 8 cut(s) 76, 77, 272, 539, 578, 1360, 1613, 2002
Fsp4HI GCNGC 5 cut(s) 119, 1122, 1769, 2298, 2404
FspBI CTAG 7 cut(s) 198, 1208, 1421, 1773, 1901, 2036, 2333
GlaI GCGC 1 cut(s) 2090
GluI GCNGC 5 cut(s) 119, 1122, 1769, 2298, 2404
GsaI CCCAGC 1 cut(s) 117
GsuI CTGGAG 3 cut(s) 413, 1542, 2264
HaeIII GGCC 1 cut(s) 542
HapII CCGG 2 cut(s) 77, 1328
HgaI GACGC 1 cut(s) 1931
HhaI GCGC 1 cut(s) 2091
Hin6I GCGC 1 cut(s) 2089
HinP1I GCGC 1 cut(s) 2089
HincII GTYRAC 3 cut(s) 85, 424, 980
HindII GTYRAC 3 cut(s) 85, 424, 980
HindIII AAGCTT 2 cut(s) 1718, 2422
HinfI GANTC 9 cut(s) 201, 305, 397, 663, 1110, 1553, 1579, 2283, 2343
HpaII CCGG 2 cut(s) 77, 1328
HphI GGTGA 4 cut(s) 1478, 1775, 2036, 2219
Hpy166II GTNNAC 5 cut(s) 85, 424, 649, 980, 1854
Hpy188I TCNGA 7 cut(s) 95, 191, 447, 1000, 1153, 1272, 1400
Hpy8I GTNNAC 5 cut(s) 85, 424, 649, 980, 1854
Hpy99I CGWCG 1 cut(s) 1372
HpyAV CCTTC 5 cut(s) 516, 980, 1045, 1952, 2428
HpyCH4III ACNGT 5 cut(s) 859, 1292, 1368, 1612, 1631
HpyCH4IV ACGT 5 cut(s) 812, 937, 1147, 1687, 1874
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 1273, 1581, 1801
HpyF3I CTNAG 7 cut(s) 188, 317, 999, 1504, 1555, 1696, 1799
HpySE526I ACGT 5 cut(s) 812, 937, 1147, 1687, 1874
HspAI GCGC 1 cut(s) 2089
KpnI GGTACC 2 cut(s) 969, 1684
Ksp22I TGATCA 1 cut(s) 1618
LmnI GCTCC 2 cut(s) 23, 126
Lsp1109I GCAGC 4 cut(s) 105, 1108, 1755, 2415
LweI GCATC 8 cut(s) 160, 1276, 1591, 1613, 1804, 1968, 2112, 2128
MaeI CTAG 7 cut(s) 198, 1208, 1421, 1773, 1901, 2036, 2333
MaeII ACGT 5 cut(s) 812, 937, 1147, 1687, 1874
MaeIII GTNAC 9 cut(s) 751, 859, 928, 1051, 1751, 1836, 2054, 2131, 2207
MfeI CAATTG 1 cut(s) 600
MflI RGATCY 7 cut(s) 387, 877, 1060, 1330, 1897, 2005, 2325
MhlI GDGCHC 1 cut(s) 1740
MlyI GAGTC 5 cut(s) 210, 672, 1104, 1547, 1588
MmeI TCCRAC 5 cut(s) 237, 1378, 1521, 2278, 2300
Mph1103I ATGCAT 3 cut(s) 1488, 1606, 2105
MslI CAYNNNNRTG 3 cut(s) 246, 945, 1461
MspA1I CMGCKG 1 cut(s) 113
MspCI CTTAAG 1 cut(s) 883
MspI CCGG 2 cut(s) 77, 1328
MspR9I CCNGG 3 cut(s) 377, 392, 2312
MunI CAATTG 1 cut(s) 600
Mva1269I GAATGC 1 cut(s) 1048
MvaI CCWGG 3 cut(s) 377, 392, 2312
MvnI CGCG 1 cut(s) 2091
MwoI GCNNNNNNNGC 4 cut(s) 220, 1273, 1581, 1801
NdeI CATATG 1 cut(s) 1196
NlaIV GGNNCC 3 cut(s) 381, 967, 1682
NmuCI GTSAC 5 cut(s) 751, 859, 928, 2131, 2207
NsiI ATGCAT 3 cut(s) 1488, 1606, 2105
NspI RCATGY 4 cut(s) 790, 1034, 1448, 2132
OliI CACNNNNGTG 1 cut(s) 1461
PaeR7I CTCGAG 1 cut(s) 2278
PagI TCATGA 2 cut(s) 358, 940
PaqCI CACCTGC 1 cut(s) 1037
PciI ACATGT 1 cut(s) 1444
PcsI WCGNNNNNNNCGW 2 cut(s) 651, 1684
PctI GAATGC 1 cut(s) 1048
PfeI GAWTC 4 cut(s) 305, 397, 2283, 2343
PflFI GACNNNGTC 1 cut(s) 814
PfoI TCCNGGA 1 cut(s) 390
PkrI GCNGC 5 cut(s) 120, 1123, 1770, 2299, 2405
PleI GAGTC 5 cut(s) 209, 671, 1104, 1547, 1587
PpsI GAGTC 5 cut(s) 209, 671, 1104, 1547, 1587
PscI ACATGT 1 cut(s) 1444
PshBI ATTAAT 1 cut(s) 1931
Psp6I CCWGG 3 cut(s) 375, 390, 2310
PspFI CCCAGC 1 cut(s) 113
PspGI CCWGG 3 cut(s) 375, 390, 2310
PspN4I GGNNCC 3 cut(s) 381, 967, 1682
PstI CTGCAG 1 cut(s) 1060
PsuI RGATCY 7 cut(s) 387, 877, 1060, 1330, 1897, 2005, 2325
PsyI GACNNNGTC 1 cut(s) 814
RsaI GTAC 5 cut(s) 333, 967, 1449, 1682, 1855
RsaNI GTAC 5 cut(s) 332, 966, 1448, 1681, 1854
RseI CAYNNNNRTG 3 cut(s) 246, 945, 1461
SatI GCNGC 5 cut(s) 119, 1122, 1769, 2298, 2404
SchI GAGTC 5 cut(s) 210, 672, 1104, 1547, 1588
ScrFI CCNGG 3 cut(s) 377, 392, 2312
SduI GDGCHC 1 cut(s) 1740
SfaNI GCATC 8 cut(s) 160, 1276, 1591, 1613, 1804, 1968, 2112, 2128
SfcI CTRYAG 1 cut(s) 1056
Sfr274I CTCGAG 1 cut(s) 2278
SlaI CTCGAG 1 cut(s) 2278
SmiMI CAYNNNNRTG 3 cut(s) 246, 945, 1461
SmlI CTYRAG 5 cut(s) 335, 883, 1305, 2278, 2425
SmoI CTYRAG 5 cut(s) 335, 883, 1305, 2278, 2425
SsiI CCGC 9 cut(s) 111, 563, 749, 1265, 1573, 2052, 2091, 2297, 2372
SspI AATATT 2 cut(s) 1162, 2122
SspMI CTAG 7 cut(s) 198, 1208, 1421, 1773, 1901, 2036, 2333
StyD4I CCNGG 3 cut(s) 375, 390, 2310
StyI CCWWGG 2 cut(s) 1985, 2142
TaaI ACNGT 5 cut(s) 859, 1292, 1368, 1612, 1631
TaiI ACGT 5 cut(s) 815, 940, 1150, 1690, 1877
TaqI TCGA 6 cut(s) 1370, 1376, 2064, 2279, 2286, 2341
TatI WGTACW 1 cut(s) 1853
TauI GCSGC 1 cut(s) 2300
TfiI GAWTC 4 cut(s) 305, 397, 2283, 2343
TscAI CASTG 3 cut(s) 517, 1730, 2053
TseFI GTSAC 5 cut(s) 751, 859, 928, 2131, 2207
TseI GCWGC 4 cut(s) 118, 1121, 1768, 2403
Tsp45I GTSAC 5 cut(s) 751, 859, 928, 2131, 2207
TspDTI ATGAA 9 cut(s) 79, 152, 276, 347, 375, 543, 957, 1860, 2015
TspGWI ACGGA 1 cut(s) 2228
TspRI CASTG 3 cut(s) 517, 1730, 2053
Tth111I GACNNNGTC 1 cut(s) 814
Vha464I CTTAAG 1 cut(s) 883
VspI ATTAAT 1 cut(s) 1931
XapI RAATTY 2 cut(s) 710, 827
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 4 cut(s) 790, 1034, 1448, 2132
XcmI CCANNNNNNNNNTGG 1 cut(s) 493
XhoI CTCGAG 1 cut(s) 2278
XmiI GTMKAC 1 cut(s) 648
XspI CTAG 7 cut(s) 198, 1208, 1421, 1773, 1901, 2036, 2333
Zsp2I ATGCAT 3 cut(s) 1488, 1606, 2105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.