pycom11g05670

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
4323208 .. 4325757
2550 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05670.1

Sequence Viewer

Length: 2550 bp
ATGGCTGGCGCTTTGATTGGAGAGGCTTTTCTCTCCGCTTCCATCGAGGTGCTGTGTGACAGAATTGCTTCAACCGAGTTTGTTGACTTGTTCCGCCAGAATAAGCTGGACGAAACCCTCCTGGAGAAACTGAAGGTGACGCTGCCCGCCCTTTCTGCAGTCCTCAATGATGCAGAAGAGAAGCAAATTTCAAACCGTGCTGTGAAAAAATGGCTTGACGAGCTCAAGCATGCTGTCTTGGACGCGGAGGACTTGCTGGATGAGATCGACACTGAAGCTCTGCGATGCAAGGTGGAAGGTGAAGGTCAAACCGAGAAATTAACCGACAAGGTGTGGAACTTCTTCTCTACTTCTCCTACTCAAAGCATGAATGTTGAGATACAAAAGTTATTGCAAAGGCTGGATGGCTTTGTGCAACAGAAGGTTGCCCTTGGTCTGACGGGAGATGTTGCGAGGAAGTTTTCACAAAGAACTCCAACAACTTCCTTGATTCATGAACCTTTTGTATATGGAAGAGACGAAGATAAAGAAAATTTATCAACAGTCTTGTTCTCTGATGATGCGAGCGAGGATGATGTATCTATCCTCACCATTATTGGTATGGGCGGGGTTGGCAAGACGACCCTTGCTCGAGCCCTTTACAACGATGATAAGGTGAACGAGCACTTTACCCTTAGATCTTGGGCATGTGTTTCAGAAGATTATAATGCTATTACGGTGACTAAAACTCTTCTCGAGTCGGTCACTTCAAAACCTTGTAACATGACAGATTTGAATTTGCTTCAAGTTGAACTTAGAGAACAACTGAGGGGAAAGAAATTCTTATTTGTGTTGGATGACCTTTGGAATGACAACTATTCTGAATTGAAGCGCCTGCAAGCTCCTTTTACTTCCGGGGCAAGGGGAAGTAAAGTCATCGTGACAACACGAAGCGGAAAGGTCGCATCTCACATGAATAATGTTCCCATTCAACACTTGAAGCCTTTGTCGCACGAAGATTGTTGGATGTTACTTGCAAACCATGCATTTGGAAACAAAAACCACAACGCACATCCAACTTTGGAAGAAATTGGCAAGAAAATTGCACGCAAGTGCAATGGGTTGCCTTTAGCAGCAGAAACACTCGGGGGTCTATTACGTTGCCAGAGAGACTTCAAGGAATGGAATAAATTGTTAAATAGTAGTCTTTGGGAGCTACCTTGTGATGAAAGTGGTATCCTTCCAGCCCTACGGTTGAGCTATCATTATCTTCCTGCTCAGTTGAAACGATGCTTTGTGTATTGTTCACTATTTCCAAAAGACTATCAGTTCAACAAGGAAGATATGGTTCTACTTTGGATGGCAGAAGGTTTCATTCCGCAAGGTTTCAATGGGACAAGAATGGAAGAGATGGCTAGAAATTACTTTGATGAACTAGTATCACGATCACTACTTCAAAAATCAGGGGAGCATGGTTTCACAATGCATGATCTTCTTAACGACTTGGGTCAGTTCATGGCTAGGGGATTTTTTCTCAGGTTGGAAGAGAGGGAATCACAAGAAGTTAAAAGACTTCGTCATTTGTCATATGCTAGGGGAGAATTTGATGCTGCTAAAAAATTTGAGCCATTAAATGGGGCTAAGTGTCTGCGGACCTTCCTACCTATCTCAATATATGGCAGGTTCTTCCACATAAGTAAAAAGTTTCTTCATGATTTGTTGCCATCCCTGAAACGTTTATGGGTTTTATCATTGTCCCGTTATAAAAATATTGTTAAAGTACCTGATTCTGTGGGCAATCTCATTCACCTACGCTACCTGGATCTCTCCCAGACGGCAATTGTAAGCTTACCTGGTGCAGTTTGCACTCTCTACAATTTGCAGACGTTACTGCTATCAGATTGTCATGATCTCATTGAACTGCCAGCAGACATGAGAAAATTGATAAATTTACGGAAGTTAACGTTGGCAGGTTGCAGCTCCCTTACTAAATTACCTGCAGATATGAGGGAATTGAGTAGTTTGCATTACCTCGATGTCAGGGGAACAAAGATAGAAGGGATGCCAGTGGAAATTGGAAGACTAAAGAGTTTGAGAACATTAACTGATTTTGTTGTGGGGAAATATACCGATCGATCTAGCATTGGAGAATTAAGGGAGTTGCAGCATCTTCAAGGAAGACTTCGTATTTCAAATCTGCAAAATGTAGTTGATGTTGTGGATGCTTTGGAAGCCAATTTGAAGAATAAGAAAGAACTCAATGACTTAGAGTTGGCATGGGGTGATGAGGAAGCCGATGATTCCCAAAAGGAGAGAGATGTGCTTGACAAGCTGCAACCTTCTGCAAATTTGGAGAAACTGACTATCAGATTCTATGGAGGAACCAGCTTCCCAAATTGGTTAGGAAGCTCTAATTCCTTCTCTAACATACAGTTCATGTGTATCAGTGATTGTAAGTATTGTTTGTCCTTGCCAAGTTTTGGGCAGCTGCCCACTCTTAAAGAGCTTCGTGTCGAAAGAATGAAATTTGTTAGGACGGTTGGTGTTGAATACTCAAATGATCGATCTTAA

Protein Analysis

850

Amino Acids

96.39

Weight (kDa)

6.39

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 101 3.5e-18 Rx N-terminal domain
NB-ARC PF00931 190 - 346 2.6e-34 NB-ARC domain
WHD_DRP PF23559 430 - 495 1.4e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 567 - 651 4.3e-11 Leucine-rich repeat region
LRR_14 PF23598 637 - 832 1.7e-17 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 708 - 834 7.8e-40 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 705, 1743
Acc36I ACCTGC 3 cut(s) 1650, 1940, 1984
AccB7I CCANNNNNTGG 2 cut(s) 1613, 2459
AccII CGCG 1 cut(s) 245
AciI CCGC 8 cut(s) 36, 94, 147, 245, 606, 933, 1358, 1630
AclI AACGTT 2 cut(s) 1714, 1943
AclWI GGATC 1 cut(s) 1809
AcsI RAATTY 9 cut(s) 186, 532, 775, 818, 1580, 1598, 1927, 2326, 2504
AcuI CTGAAG 2 cut(s) 152, 294
AfaI GTAC 1 cut(s) 1761
AfiI CCNNNNNNNGG 3 cut(s) 900, 1613, 2459
AhlI ACTAGT 1 cut(s) 1414
AjnI CCWGG 3 cut(s) 120, 1797, 1831
AjuI GAANNNNNNNTTGG 2 cut(s) 1928, 1960
AleI CACNNNNGTG 1 cut(s) 1090
Alw21I GWGCWC 2 cut(s) 225, 666
Alw26I GTCTC 2 cut(s) 510, 1143
AlwI GGATC 1 cut(s) 1809
Ama87I CYCGRG 3 cut(s) 630, 734, 1124
ApeKI GCWGC 8 cut(s) 142, 1112, 1589, 1956, 2143, 2311, 2464, 2467
ApoI RAATTY 9 cut(s) 186, 532, 775, 818, 1580, 1598, 1927, 2326, 2504
Asp700I GAANNNNTTC 2 cut(s) 67, 341
AspLEI GCGC 2 cut(s) 11, 873
AspS9I GGNCC 1 cut(s) 1632
AsuC2I CCSGG 1 cut(s) 895
AsuHPI GGTGA 7 cut(s) 148, 311, 580, 667, 730, 1778, 2273
AvaI CYCGRG 3 cut(s) 630, 734, 1124
AvaII GGWCC 1 cut(s) 1632
BaeI ACNNNNGTAYC 2 cut(s) 371, 404
BanII GRGCYC 2 cut(s) 225, 637
BbsI GAAGAC 2 cut(s) 2065, 2164
Bbv12I GWGCWC 2 cut(s) 225, 666
BbvI GCAGC 8 cut(s) 129, 1124, 1576, 1968, 2155, 2298, 2454, 2476
BccI CCATC 5 cut(s) 50, 398, 1333, 1384, 1711
BceAI ACGGC 1 cut(s) 1830
BciT130I CCWGG 3 cut(s) 122, 1799, 1833
BciVI GTATCC 1 cut(s) 1226
BcnI CCSGG 1 cut(s) 895
BcoDI GTCTC 2 cut(s) 510, 1143
BcuI ACTAGT 1 cut(s) 1414
BfaI CTAG 5 cut(s) 1395, 1415, 1500, 1572, 2118
BfmI CTRYAG 2 cut(s) 156, 1977
BfoI RGCGCY 2 cut(s) 12, 874
BfuAI ACCTGC 3 cut(s) 1650, 1940, 1984
BfuI GTATCC 1 cut(s) 1226
BglII AGATCT 1 cut(s) 677
BisI GCNGC 8 cut(s) 143, 1113, 1590, 1957, 2144, 2312, 2465, 2468
BlsI GCNGC 8 cut(s) 144, 1114, 1591, 1958, 2145, 2313, 2466, 2469
Bme1390I CCNGG 4 cut(s) 122, 895, 1799, 1833
Bme18I GGWCC 1 cut(s) 1632
BmeT110I CYCGRG 3 cut(s) 630, 734, 1124
BmgT120I GGNCC 1 cut(s) 1632
BmiI GGNNCC 1 cut(s) 2362
BmrFI CCNGG 4 cut(s) 122, 895, 1799, 1833
BmsI GCATC 9 cut(s) 160, 275, 550, 953, 1259, 1576, 2031, 2155, 2191
BoxI GACNNNNGTC 1 cut(s) 1485
BpiI GAAGAC 2 cut(s) 2065, 2164
BpmI CTGGAG 1 cut(s) 143
BpuEI CTTGAG 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 895
Bsa29I ATCGAT 2 cut(s) 2113, 2542
BsaJI CCNNGG 2 cut(s) 430, 894
Bsc4I CCNNNNNNNGG 3 cut(s) 900, 1613, 2459
Bse1I ACTGG 1 cut(s) 2045
Bse3DI GCAATG 1 cut(s) 1102
BseBI CCWGG 3 cut(s) 122, 1799, 1833
BseCI ATCGAT 2 cut(s) 2113, 2542
BseDI CCNNGG 2 cut(s) 430, 894
BseLI CCNNNNNNNGG 3 cut(s) 900, 1613, 2459
BseMI GCAATG 1 cut(s) 1102
BseMII CTCAG 3 cut(s) 797, 1271, 1528
BseNI ACTGG 1 cut(s) 2045
BseXI GCAGC 8 cut(s) 129, 1124, 1576, 1968, 2155, 2298, 2454, 2476
BsgI GTGCAG 1 cut(s) 1857
Bsh1236I CGCG 1 cut(s) 245
Bsh1285I CGRYCG 1 cut(s) 2113
BshVI ATCGAT 2 cut(s) 2113, 2542
BsiEI CGRYCG 1 cut(s) 2113
BsiHKAI GWGCWC 2 cut(s) 225, 666
BsiHKCI CYCGRG 3 cut(s) 630, 734, 1124
BsiSI CCGG 1 cut(s) 894
BslFI GGGAC 2 cut(s) 1387, 1720
BslI CCNNNNNNNGG 3 cut(s) 900, 1613, 2459
BsmAI GTCTC 2 cut(s) 510, 1143
BsmBI CGTCTC 1 cut(s) 510
BsmFI GGGAC 2 cut(s) 1387, 1720
BsoBI CYCGRG 3 cut(s) 630, 734, 1124
Bsp1286I GDGCHC 3 cut(s) 225, 637, 666
BspACI CCGC 8 cut(s) 36, 94, 147, 245, 606, 933, 1358, 1630
BspCNI CTCAG 3 cut(s) 798, 1270, 1527
BspDI ATCGAT 2 cut(s) 2113, 2542
BspFNI CGCG 1 cut(s) 245
BspHI TCATGA 3 cut(s) 493, 1690, 1885
BspLI GGNNCC 1 cut(s) 2362
BspMAI CTGCAG 2 cut(s) 160, 1981
BspMI ACCTGC 3 cut(s) 1650, 1940, 1984
BspPI GGATC 1 cut(s) 1809
BsrDI GCAATG 1 cut(s) 1102
BsrI ACTGG 1 cut(s) 2045
BssECI CCNNGG 2 cut(s) 430, 894
BssT1I CCWWGG 1 cut(s) 430
Bst2UI CCWGG 3 cut(s) 122, 1799, 1833
Bst4CI ACNGT 6 cut(s) 197, 544, 718, 1233, 2412, 2518
Bst6I CTCTTC 5 cut(s) 171, 508, 735, 1380, 1518
BstAPI GCANNNNNTGC 1 cut(s) 1022
BstC8I GCNNGC 8 cut(s) 7, 147, 231, 565, 875, 879, 1087, 1905
BstDEI CTNAG 7 cut(s) 674, 794, 806, 1257, 1514, 1620, 2245
BstFNI CGCG 1 cut(s) 245
BstH2I RGCGCY 2 cut(s) 12, 874
BstHHI GCGC 2 cut(s) 11, 873
BstMAI GTCTC 2 cut(s) 510, 1143
BstMCI CGRYCG 1 cut(s) 2113
BstMWI GCNNNNNNNGC 7 cut(s) 155, 220, 612, 988, 1022, 2210, 2308
BstNI CCWGG 3 cut(s) 122, 1799, 1833
BstNSI RCATGY 2 cut(s) 233, 690
BstPAI GACNNNNGTC 1 cut(s) 1485
BstSCI CCNGG 4 cut(s) 120, 893, 1797, 1831
BstSFI CTRYAG 2 cut(s) 156, 1977
BstUI CGCG 1 cut(s) 245
BstV1I GCAGC 8 cut(s) 129, 1124, 1576, 1968, 2155, 2298, 2454, 2476
BstV2I GAAGAC 2 cut(s) 2065, 2164
BstX2I RGATCY 2 cut(s) 677, 1801
BstXI CCANNNNNNTGG 1 cut(s) 1028
BstYI RGATCY 2 cut(s) 677, 1801
Bsu15I ATCGAT 2 cut(s) 2113, 2542
BsuI GTATCC 1 cut(s) 1226
BsuTUI ATCGAT 2 cut(s) 2113, 2542
BtgZI GCGATG 1 cut(s) 298
BtsIMutI CAGTG 3 cut(s) 270, 2052, 2431
BveI ACCTGC 3 cut(s) 1650, 1940, 1984
Cac8I GCNNGC 8 cut(s) 7, 147, 231, 565, 875, 879, 1087, 1905
CciI TCATGA 3 cut(s) 493, 1690, 1885
CfoI GCGC 2 cut(s) 11, 873
Cfr13I GGNCC 1 cut(s) 1632
ClaI ATCGAT 2 cut(s) 2113, 2542
CseI GACGC 2 cut(s) 148, 251
CsiI ACCWGGT 1 cut(s) 1831
Csp6I GTAC 1 cut(s) 1760
CviQI GTAC 1 cut(s) 1760
DdeI CTNAG 7 cut(s) 674, 794, 806, 1257, 1514, 1620, 2245
Eam1104I CTCTTC 5 cut(s) 171, 508, 735, 1380, 1518
EarI CTCTTC 5 cut(s) 171, 508, 735, 1380, 1518
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 223
Eco130I CCWWGG 1 cut(s) 430
Eco24I GRGCYC 2 cut(s) 225, 637
Eco47I GGWCC 1 cut(s) 1632
Eco53kI GAGCTC 1 cut(s) 223
Eco57I CTGAAG 2 cut(s) 152, 294
Eco88I CYCGRG 3 cut(s) 630, 734, 1124
EcoICRI GAGCTC 1 cut(s) 223
EcoRII CCWGG 3 cut(s) 120, 1797, 1831
EcoT14I CCWWGG 1 cut(s) 430
EcoT22I ATGCAT 2 cut(s) 1027, 1467
EcoT38I GRGCYC 2 cut(s) 225, 637
ErhI CCWWGG 1 cut(s) 430
Esp3I CGTCTC 1 cut(s) 510
FalI AAGNNNNNCTT 6 cut(s) 777, 809, 806, 838, 2145, 2177
FaqI GGGAC 2 cut(s) 1387, 1720
FauI CCCGC 2 cut(s) 154, 599
FauNDI CATATG 1 cut(s) 1567
Fnu4HI GCNGC 8 cut(s) 143, 1113, 1590, 1957, 2144, 2312, 2465, 2468
FriOI GRGCYC 2 cut(s) 225, 637
Fsp4HI GCNGC 8 cut(s) 143, 1113, 1590, 1957, 2144, 2312, 2465, 2468
FspBI CTAG 5 cut(s) 1395, 1415, 1500, 1572, 2118
GlaI GCGC 2 cut(s) 10, 872
GluI GCNGC 8 cut(s) 143, 1113, 1590, 1957, 2144, 2312, 2465, 2468
GsuI CTGGAG 1 cut(s) 143
HaeII RGCGCY 2 cut(s) 12, 874
HapII CCGG 1 cut(s) 894
HgaI GACGC 2 cut(s) 148, 251
HhaI GCGC 2 cut(s) 11, 873
Hin6I GCGC 2 cut(s) 9, 871
HinP1I GCGC 2 cut(s) 9, 871
HincII GTYRAC 2 cut(s) 85, 1941
HindII GTYRAC 2 cut(s) 85, 1941
HindIII AAGCTT 1 cut(s) 1825
HinfI GANTC 6 cut(s) 490, 737, 1532, 1766, 2279, 2349
HpaI GTTAAC 1 cut(s) 1941
HpaII CCGG 1 cut(s) 894
HphI GGTGA 7 cut(s) 148, 311, 580, 667, 730, 1778, 2273
Hpy166II GTNNAC 4 cut(s) 85, 658, 1286, 1941
Hpy188I TCNGA 6 cut(s) 438, 556, 697, 862, 1879, 2348
Hpy188III TCNNGA 6 cut(s) 494, 734, 919, 1422, 1691, 1886
Hpy8I GTNNAC 4 cut(s) 85, 658, 1286, 1941
HpyCH4III ACNGT 6 cut(s) 197, 544, 718, 1233, 2412, 2518
HpyCH4IV ACGT 4 cut(s) 1138, 1714, 1865, 1943
HpyF10VI GCNNNNNNNGC 7 cut(s) 155, 220, 612, 988, 1022, 2210, 2308
HpyF3I CTNAG 7 cut(s) 674, 794, 806, 1257, 1514, 1620, 2245
HpySE526I ACGT 4 cut(s) 1138, 1714, 1865, 1943
HspAI GCGC 2 cut(s) 9, 871
KspAI GTTAAC 1 cut(s) 1941
LmnI GCTCC 4 cut(s) 886, 1192, 1447, 1964
Lsp1109I GCAGC 8 cut(s) 129, 1124, 1576, 1968, 2155, 2298, 2454, 2476
LweI GCATC 9 cut(s) 160, 275, 550, 953, 1259, 1576, 2031, 2155, 2191
MabI ACCWGGT 1 cut(s) 1831
MaeI CTAG 5 cut(s) 1395, 1415, 1500, 1572, 2118
MaeII ACGT 4 cut(s) 1138, 1714, 1865, 1943
MaeIII GTNAC 8 cut(s) 56, 136, 718, 742, 758, 919, 1008, 1866
MfeI CAATTG 1 cut(s) 1818
MflI RGATCY 2 cut(s) 677, 1801
MhlI GDGCHC 3 cut(s) 225, 637, 666
MlyI GAGTC 1 cut(s) 746
MmeI TCCRAC 5 cut(s) 500, 813, 983, 1079, 1500
Mph1103I ATGCAT 2 cut(s) 1027, 1467
MroXI GAANNNNTTC 2 cut(s) 67, 341
MslI CAYNNNNRTG 2 cut(s) 47, 1090
MspA1I CMGCKG 1 cut(s) 2467
MspI CCGG 1 cut(s) 894
MspR9I CCNGG 4 cut(s) 122, 895, 1799, 1833
MunI CAATTG 1 cut(s) 1818
MvaI CCWGG 3 cut(s) 122, 1799, 1833
MvnI CGCG 1 cut(s) 245
MwoI GCNNNNNNNGC 7 cut(s) 155, 220, 612, 988, 1022, 2210, 2308
NciI CCSGG 1 cut(s) 895
NdeI CATATG 1 cut(s) 1567
NlaIV GGNNCC 1 cut(s) 2362
NmuCI GTSAC 5 cut(s) 56, 136, 718, 742, 919
NsiI ATGCAT 2 cut(s) 1027, 1467
NspI RCATGY 2 cut(s) 233, 690
OliI CACNNNNGTG 1 cut(s) 1090
PaeI GCATGC 1 cut(s) 233
PaeR7I CTCGAG 2 cut(s) 630, 734
PagI TCATGA 3 cut(s) 493, 1690, 1885
PdmI GAANNNNTTC 2 cut(s) 67, 341
PfeI GAWTC 5 cut(s) 490, 1532, 1766, 2279, 2349
PflFI GACNNNGTC 1 cut(s) 1554
PflMI CCANNNNNTGG 2 cut(s) 1613, 2459
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 8 cut(s) 144, 1114, 1591, 1958, 2145, 2313, 2466, 2469
Ple19I CGATCG 1 cut(s) 2113
PleI GAGTC 1 cut(s) 745
PpsI GAGTC 1 cut(s) 745
PshAI GACNNNNGTC 1 cut(s) 1485
PsiI TTATAA 2 cut(s) 705, 1743
Psp124BI GAGCTC 1 cut(s) 225
Psp1406I AACGTT 2 cut(s) 1714, 1943
Psp6I CCWGG 3 cut(s) 120, 1797, 1831
PspGI CCWGG 3 cut(s) 120, 1797, 1831
PspN4I GGNNCC 1 cut(s) 2362
PspPI GGNCC 1 cut(s) 1632
PspXI VCTCGAGB 1 cut(s) 630
PstI CTGCAG 2 cut(s) 160, 1981
PsuI RGATCY 2 cut(s) 677, 1801
PsyI GACNNNGTC 1 cut(s) 1554
PvuI CGATCG 1 cut(s) 2113
PvuII CAGCTG 1 cut(s) 2467
RsaI GTAC 1 cut(s) 1761
RsaNI GTAC 1 cut(s) 1760
RseI CAYNNNNRTG 2 cut(s) 47, 1090
SacI GAGCTC 1 cut(s) 225
SatI GCNGC 8 cut(s) 143, 1113, 1590, 1957, 2144, 2312, 2465, 2468
Sau96I GGNCC 1 cut(s) 1632
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 4 cut(s) 122, 895, 1799, 1833
SduI GDGCHC 3 cut(s) 225, 637, 666
SexAI ACCWGGT 1 cut(s) 1831
SfaNI GCATC 9 cut(s) 160, 275, 550, 953, 1259, 1576, 2031, 2155, 2191
SfcI CTRYAG 2 cut(s) 156, 1977
Sfr274I CTCGAG 2 cut(s) 630, 734
SinI GGWCC 1 cut(s) 1632
SlaI CTCGAG 2 cut(s) 630, 734
SmiMI CAYNNNNRTG 2 cut(s) 47, 1090
SmlI CTYRAG 3 cut(s) 224, 630, 734
SmoI CTYRAG 3 cut(s) 224, 630, 734
SpeI ACTAGT 1 cut(s) 1414
SphI GCATGC 1 cut(s) 233
SsiI CCGC 8 cut(s) 36, 94, 147, 245, 606, 933, 1358, 1630
SspI AATATT 1 cut(s) 1750
SspMI CTAG 5 cut(s) 1395, 1415, 1500, 1572, 2118
SstI GAGCTC 1 cut(s) 225
StyD4I CCNGG 4 cut(s) 120, 893, 1797, 1831
StyI CCWWGG 1 cut(s) 430
TaaI ACNGT 6 cut(s) 197, 544, 718, 1233, 2412, 2518
TaiI ACGT 4 cut(s) 1141, 1717, 1868, 1946
TaqI TCGA 8 cut(s) 45, 267, 631, 735, 2013, 2113, 2493, 2542
TaqII GACCGA 1 cut(s) 730
TfiI GAWTC 5 cut(s) 490, 1532, 1766, 2279, 2349
TscAI CASTG 3 cut(s) 277, 2052, 2431
TseFI GTSAC 5 cut(s) 56, 136, 718, 742, 919
TseI GCWGC 8 cut(s) 142, 1112, 1589, 1956, 2143, 2311, 2464, 2467
Tsp45I GTSAC 5 cut(s) 56, 136, 718, 742, 919
TspGWI ACGGA 1 cut(s) 1948
TspRI CASTG 3 cut(s) 277, 2052, 2431
Tth111I GACNNNGTC 1 cut(s) 1554
Van91I CCANNNNNTGG 2 cut(s) 1613, 2459
VpaK11BI GGWCC 1 cut(s) 1632
XapI RAATTY 9 cut(s) 186, 532, 775, 818, 1580, 1598, 1927, 2326, 2504
XceI RCATGY 2 cut(s) 233, 690
XcmI CCANNNNNNNNNTGG 1 cut(s) 598
XhoI CTCGAG 2 cut(s) 630, 734
XmnI GAANNNNTTC 2 cut(s) 67, 341
XspI CTAG 5 cut(s) 1395, 1415, 1500, 1572, 2118
Zsp2I ATGCAT 2 cut(s) 1027, 1467
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.