RchiOBHm_Chr5g0044631

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
40016957 .. 40023033
6077 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32282

Sequence Viewer

Length: 369 bp
ATGCAGTTGGGTCTACCAACACTCACCTCTCTGTATATCTTGAGAGTCGACTTTGAGGGATGTGAACAAGTTGTAGATTCATTTCCAGACGAGGGGCTGCTGCCAACCACTCTCGGATCACTCGACATCTACAGTATTTCAAAGCTGGACGGCAAGGGGTTTAAACAACTCGCCTCTCTTAACCAGTTGATAATTCGCGATTGCCCTGAACTCCGGTGCTTGCCAGATGAAGGGCTACCCACTTCACTTTCTCATCTGGACATCGATCATTGTCCTTTACTAGAACAACGTTGCCACAGAGAGACGGGGGAAGATTGGCCCAAGATTGCACACATCAAGAGCATTTATATCAATAACAAACGTATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

13.77

Weight (kDa)

5.07

Isoelectric Point (pI)

34.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000035)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14470 AT3G14470
fragaria_vesca FvH4_1g01220 FvH4_1g01230 FvH4_3g24551 FvH4_3g24552 FvH4_4g29310 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_4g29930 FvH4_6g39860 FvH4_6g39861 FvH4_7g11380
malus_domestica MD00G1072900.v1.1 MD00G1073100.v1.1 MD00G1120600.v1.1 MD00G1120900.v1.1 MD00G1121000.v1.1 MD00G1121200.v1.1 MD00G1152300.v1.1 MD00G1203600.v1.1 MD00G1203700.v1.1 MD02G1250900.v1.1 MD02G1251900.v1.1 MD02G1252800.v1.1 MD02G1277100.v1.1 MD02G1277200.v1.1 MD02G1277400.v1.1 MD02G1286100.v1.1 MD02G1286200.v1.1 MD02G1286900.v1.1 MD03G1006200.v1.1 MD03G1015300.v1.1 MD03G1015500.v1.1 MD03G1015900.v1.1 MD03G1016000.v1.1 MD03G1024900.v1.1 MD03G1025000.v1.1 MD03G1025500.v1.1 MD03G1026000.v1.1 MD03G1026500.v1.1 MD03G1031800.v1.1 MD03G1072200.v1.1 MD07G1028000.v1.1 MD07G1028300.v1.1 MD07G1029400.v1.1 MD07G1029500.v1.1 MD07G1040300.v1.1 MD07G1044500.v1.1 MD07G1045100.v1.1 MD07G1045500.v1.1 MD07G1050700.v1.1 MD07G1050900.v1.1 MD07G1055800.v1.1 MD07G1056200.v1.1 MD07G1056600.v1.1 MD07G1057100.v1.1 MD07G1057200.v1.1 MD08G1056500.v1.1 MD08G1056600.v1.1 MD08G1056700.v1.1 MD08G1056800.v1.1 MD08G1128800.v1.1 MD08G1129500.v1.1 MD08G1130000.v1.1 MD11G1066700.v1.1 MD11G1066800.v1.1 MD11G1066900.v1.1 MD11G1067000.v1.1 MD11G1067500.v1.1 MD11G1069800.v1.1 MD11G1070400.v1.1 MD11G1071100.v1.1 MD11G1071200.v1.1 MD11G1077200.v1.1 MD11G1077700.v1.1 MD11G1077900.v1.1 MD11G1078100.v1.1 MD11G1078300.v1.1 MD11G1078500.v1.1 MD11G1135200.v1.1 MD11G1135400.v1.1 MD11G1152900.v1.1 MD11G1153000.v1.1 MD17G1056800.v1.1
prunus_persica Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G037800_v2.0.a1 Prupe.2G040500_v2.0.a1 Prupe.2G040700_v2.0.a1 Prupe.2G043000_v2.0.a1 Prupe.2G043100_v2.0.a1 Prupe.2G043200_v2.0.a1 Prupe.2G046000_v2.0.a1 Prupe.2G046300_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046400_v2.0.a1 Prupe.2G046700_v2.0.a1 Prupe.2G046900_v2.0.a1 Prupe.2G051100_v2.0.a1 Prupe.2G052200_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053600_v2.0.a1 Prupe.2G053700_v2.0.a1 Prupe.2G053800_v2.0.a1 Prupe.2G053900_v2.0.a1 Prupe.2G054000_v2.0.a1 Prupe.2G054100_v2.0.a1 Prupe.2G054200_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054300_v2.0.a1 Prupe.2G054500_v2.0.a1 Prupe.2G054700_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.4G286000_v2.0.a1 Prupe.6G129800_v2.0.a1 Prupe.6G130000_v2.0.a1 Prupe.6G130000_v2.0.a1
pyrus_communis pycom02g23740 pycom02g23750 pycom02g24320 pycom03g00620 pycom03g01280 pycom03g01320 pycom03g01350 pycom03g01360 pycom03g01370 pycom03g01380 pycom03g01390 pycom03g02160 pycom03g02170 pycom03g05850 pycom03g09810 pycom07g02120 pycom07g02790 pycom07g02800 pycom07g03210 pycom07g03660 pycom07g03670 pycom07g04350 pycom08g10780 pycom08g10840 pycom08g10910 pycom11g05650 pycom11g05670 pycom11g05800 pycom11g05880 pycom11g05890 pycom11g05940 pycom11g06490 pycom11g06500 pycom11g06520 pycom11g06560 pycom11g06570 pycom11g11230 pycom11g13650 pycom17g05700
rosa_chinensis RchiOBHm_Chr1g0318341 RchiOBHm_Chr1g0318901 RchiOBHm_Chr1g0318931 RchiOBHm_Chr1g0327301 RchiOBHm_Chr1g0328491 RchiOBHm_Chr1g0336761 RchiOBHm_Chr1g0336831 RchiOBHm_Chr1g0340721 RchiOBHm_Chr1g0342461 RchiOBHm_Chr1g0342471 RchiOBHm_Chr1g0342481 RchiOBHm_Chr1g0346131 RchiOBHm_Chr1g0346191 RchiOBHm_Chr1g0346211 RchiOBHm_Chr1g0346241 RchiOBHm_Chr1g0346261 RchiOBHm_Chr1g0346281 RchiOBHm_Chr1g0346461 RchiOBHm_Chr1g0346471 RchiOBHm_Chr1g0346481 RchiOBHm_Chr1g0346501 RchiOBHm_Chr1g0347691 RchiOBHm_Chr1g0347701 RchiOBHm_Chr1g0347751 RchiOBHm_Chr1g0347791 RchiOBHm_Chr1g0347971 RchiOBHm_Chr1g0349661 RchiOBHm_Chr1g0349741 RchiOBHm_Chr1g0357561 RchiOBHm_Chr3g0492601 RchiOBHm_Chr5g0039181 RchiOBHm_Chr5g0039231 RchiOBHm_Chr5g0039241 RchiOBHm_Chr5g0039251 RchiOBHm_Chr5g0039531 RchiOBHm_Chr5g0044001 RchiOBHm_Chr5g0044571 RchiOBHm_Chr5g0044611 RchiOBHm_Chr5g0044631 RchiOBHm_Chr5g0044641 RchiOBHm_Chr5g0044651 RchiOBHm_Chr5g0044661 RchiOBHm_Chr5g0044681 RchiOBHm_Chr5g0045221 RchiOBHm_Chr5g0045901 RchiOBHm_Chr5g0045991 RchiOBHm_Chr5g0046001 RchiOBHm_Chr5g0046011
rosa_laevigata RLG00000028715 RLG00000028718 RLG00000029034 RLG00000029926 RLG00000030516 RLG00000034285 RLG00000034288
rosa_multiflora Rmu_co7987576.1_g000001 Rmu_co8028038.1_g000001 Rmu_co8104858.1_g000001 Rmu_co8185828.1_g000001 Rmu_co8227651.1_g000001 Rmu_co8235061.1_g000001 Rmu_co8246845.1_g000001 Rmu_co8254315.1_g000001 Rmu_co8284899.1_g000001 Rmu_co8401461.1_g000001 Rmu_co8475625.1_g000001 Rmu_co8502681.1_g000001 Rmu_sc0000250.1_g000005 Rmu_sc0000492.1_g000001 Rmu_sc0000533.1_g000004 Rmu_sc0000795.1_g000114 Rmu_sc0000831.1_g000039 Rmu_sc0000907.1_g000014 Rmu_sc0000907.1_g000034 Rmu_sc0001035.1_g000007 Rmu_sc0001035.1_g000011 Rmu_sc0001035.1_g000012 Rmu_sc0001099.1_g000003 Rmu_sc0001157.1_g000008 Rmu_sc0001212.1_g000016 Rmu_sc0001212.1_g000017 Rmu_sc0001304.1_g000027 Rmu_sc0001304.1_g000033 Rmu_sc0001773.1_g000019 Rmu_sc0001836.1_g000069 Rmu_sc0001856.1_g000004 Rmu_sc0002286.1_g000003 Rmu_sc0002286.1_g000004 Rmu_sc0002286.1_g000005 Rmu_sc0002286.1_g000007 Rmu_sc0002286.1_g000015 Rmu_sc0002495.1_g000025 Rmu_sc0002545.1_g000008 Rmu_sc0002545.1_g000009 Rmu_sc0002662.1_g000009 Rmu_sc0003363.1_g000019 Rmu_sc0003363.1_g000022 Rmu_sc0003600.1_g000057 Rmu_sc0003809.1_g000036 Rmu_sc0003809.1_g000037 Rmu_sc0005008.1_g000026 Rmu_sc0005008.1_g000028 Rmu_sc0005028.1_g000001 Rmu_sc0005144.1_g000022 Rmu_sc0005167.1_g000004 Rmu_sc0005626.1_g000005 Rmu_sc0005626.1_g000018 Rmu_sc0006228.1_g000011 Rmu_sc0006609.1_g000007 Rmu_sc0006609.1_g000009 Rmu_sc0006609.1_g000015 Rmu_sc0006609.1_g000016 Rmu_sc0006609.1_g000017 Rmu_sc0006609.1_g000018 Rmu_sc0007060.1_g000003 Rmu_sc0007318.1_g000011 Rmu_sc0007992.1_g000002 Rmu_sc0009172.1_g000001 Rmu_sc0010151.1_g000010 Rmu_sc0010151.1_g000011 Rmu_sc0011778.1_g000001 Rmu_sc0011778.1_g000005 Rmu_sc0011778.1_g000009 Rmu_sc0012293.1_g000001 Rmu_sc0012293.1_g000002 Rmu_sc0016606.1_g000001 Rmu_sc0016836.1_g000001 Rmu_sc0021084.1_g000008 Rmu_sc0021449.1_g000001 Rmu_sc0026523.1_g000001 Rmu_sc0027133.1_g000003 Rmu_sc0038674.1_g000001 Rmu_ssc0000255.1_g000053 Rmu_ssc0000255.1_g000063 Rmu_ssc0000255.1_g000064 Rmu_ssc0000263.1_g000004 Rmu_ssc0000400.1_g000027
rosa_roxburghii Rroxscaffold_1G00035290 Rroxscaffold_1G00036350 Rroxscaffold_1G00036360 Rroxscaffold_1G00036400 Rroxscaffold_1G00036460 Rroxscaffold_1G00037000 Rroxscaffold_1G00040440 Rroxscaffold_1G00041890 Rroxscaffold_1G00041920 Rroxscaffold_4G00307460 Rroxscaffold_4G00307500 Rroxscaffold_4G00308500 Rroxscaffold_4G00308510 Rroxscaffold_4G00308770 Rroxscaffold_4G00313020 Rroxscaffold_4G00321580 Rroxscaffold_4G00323030 Rroxscaffold_4G00326850 Rroxscaffold_4G00328770 Rroxscaffold_4G00328780 Rroxscaffold_4G00329310 Rroxscaffold_5G00352110
rosa_rugosa Rorug01G0020700 Rorug01G0023000 Rorug01G0023100 Rorug01G0023200 Rorug01G0023300 Rorug01G0023400 Rorug01G0024500 Rorug01G0025100 Rorug01G0025200 Rorug01G0025400 Rorug01G0025400 Rorug01G0064700 Rorug01G0065300 Rorug01G0127600 Rorug01G0128000 Rorug01G0148000.1 Rorug01G0150500.1 Rorug01G0161600.1 Rorug01G0161800.1 Rorug01G0163600.1 Rorug01G0178300 Rorug01G0178500 Rorug01G0178700 Rorug01G0179900 Rorug01G0180200 Rorug01G0180300 Rorug01G0180400 Rorug01G0189000 Rorug01G0189100 Rorug01G0190500 Rorug01G0204800 Rorug05G0177200 Rorug05G0210300 Rorug05G0210300 Rorug05G0210300 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215400 Rorug05G0215500 Rorug05G0215600 Rorug05G0215800 Rorug05G0215900 Rorug05G0215900 Rorug05G0216000 Rorug05G0216200 Rorug05G0216300 Rorug05G0221900 Rorug07G0276700
rosa_samantha Rh1BG028400 Rh1BG033500 Rh1BG065100 Rh1BG073100 Rh1BG073200 Rh1BG117000 Rh1BG164000 Rh1BG164200 Rh1BG172100 Rh1BG173900 Rh1BG174100 Rh1BG188400 Rh1CG036000 Rh1CG036500 Rh1CG089900 Rh1CG140200 Rh1CG164700 Rh1CG182600 Rh1CG182900 Rh1CG183400 Rh1CG191300 Rh1CG192000 Rh1CG207700 Rh1DG033800 Rh1DG033900 Rh1DG096000 Rh5AG299900 Rh5AG304500 Rh5AG307100 Rh5AG307500 Rh5CG301600 Rh5CG329800 Rh5CG333800 Rh5DG311400 Rh5DG316300 Rh5DG316400 Rh5DG316700 Rh5DG316800 Rh5DG316900 Rh5DG326100 Rh7AG431900 Rh7CG451000
rosa_wichuraiana Rw0G007840 Rw0G009850 Rw0G013000 Rw0G015090 Rw0G021190 Rw1G002610 Rw1G004320 Rw1G006520 Rw1G007250 Rw1G012020 Rw1G013830 Rw1G014770 Rw1G016300 Rw1G016600 Rw1G016650 Rw1G017290 Rw1G017420 Rw1G017630 Rw1G017650 Rw1G017660 Rw1G017690 Rw1G017700 Rw1G018960 Rw5G024660 Rw5G024700 Rw5G024720 Rw5G024740 Rw5G024980 Rw5G027710 Rw5G027720 Rw5G027730 Rw5G027740 Rw5G027750 Rw5G028130 Rw5G028740 Rw5G028750 Rw5G028790

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 13, 48
AccII CGCG 1 cut(s) 198
AclI AACGTT 1 cut(s) 289
AclWI GGATC 1 cut(s) 124
AfiI CCNNNNNNNGG 2 cut(s) 92, 230
AgsI TTSAA 1 cut(s) 141
AluBI AGCT 1 cut(s) 145
AluI AGCT 1 cut(s) 145
Alw26I GTCTC 1 cut(s) 296
AlwI GGATC 1 cut(s) 124
AoxI GGCC 1 cut(s) 317
ApeKI GCWGC 2 cut(s) 97, 100
AspS9I GGNCC 1 cut(s) 318
AsuHPI GGTGA 1 cut(s) 16
BbvI GCAGC 2 cut(s) 84, 87
BceAI ACGGC 1 cut(s) 166
BcoDI GTCTC 1 cut(s) 296
BfaI CTAG 1 cut(s) 281
BfmI CTRYAG 1 cut(s) 130
BisI GCNGC 2 cut(s) 98, 101
BlsI GCNGC 2 cut(s) 99, 102
BmgT120I GGNCC 1 cut(s) 318
BpuEI CTTGAG 1 cut(s) 61
Bsa29I ATCGAT 1 cut(s) 264
BsaWI WCCGGW 1 cut(s) 213
Bsc4I CCNNNNNNNGG 2 cut(s) 92, 230
Bse1I ACTGG 1 cut(s) 184
BseCI ATCGAT 1 cut(s) 264
BseGI GGATG 1 cut(s) 65
BseLI CCNNNNNNNGG 2 cut(s) 92, 230
BseNI ACTGG 1 cut(s) 184
BseXI GCAGC 2 cut(s) 84, 87
Bsh1236I CGCG 1 cut(s) 198
BshFI GGCC 1 cut(s) 319
BshVI ATCGAT 1 cut(s) 264
BsiSI CCGG 1 cut(s) 214
BslI CCNNNNNNNGG 2 cut(s) 92, 230
BsmAI GTCTC 1 cut(s) 296
BsmBI CGTCTC 1 cut(s) 296
BsnI GGCC 1 cut(s) 319
Bsp143I GATC 2 cut(s) 116, 265
Bsp68I TCGCGA 1 cut(s) 198
BspANI GGCC 1 cut(s) 319
BspDI ATCGAT 1 cut(s) 264
BspFNI CGCG 1 cut(s) 198
BspPI GGATC 1 cut(s) 124
BsrI ACTGG 1 cut(s) 184
BssMI GATC 2 cut(s) 116, 265
Bst4CI ACNGT 1 cut(s) 134
BstC8I GCNNGC 1 cut(s) 221
BstF5I GGATG 1 cut(s) 65
BstFNI CGCG 1 cut(s) 198
BstKTI GATC 2 cut(s) 119, 268
BstMAI GTCTC 1 cut(s) 296
BstMBI GATC 2 cut(s) 116, 265
BstSFI CTRYAG 1 cut(s) 130
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 2 cut(s) 84, 87
Bsu15I ATCGAT 1 cut(s) 264
BsuRI GGCC 1 cut(s) 319
BsuTUI ATCGAT 1 cut(s) 264
BtsCI GGATG 1 cut(s) 65
BtuMI TCGCGA 1 cut(s) 198
Cac8I GCNNGC 1 cut(s) 221
Cfr13I GGNCC 1 cut(s) 318
ClaI ATCGAT 1 cut(s) 264
CviJI RGCY 4 cut(s) 97, 145, 235, 319
CviKI_1 RGCY 4 cut(s) 97, 145, 235, 319
DpnI GATC 2 cut(s) 118, 267
DpnII GATC 2 cut(s) 116, 265
DraI TTTAAA 1 cut(s) 163
Esp3I CGTCTC 1 cut(s) 296
FaiI YATR 4 cut(s) 36, 348, 365, 367
FblI GTMKAC 2 cut(s) 13, 48
Fnu4HI GCNGC 2 cut(s) 98, 101
FokI GGATG 1 cut(s) 72
Fsp4HI GCNGC 2 cut(s) 98, 101
FspBI CTAG 1 cut(s) 281
GluI GCNGC 2 cut(s) 98, 101
HaeIII GGCC 1 cut(s) 319
HapII CCGG 1 cut(s) 214
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HinfI GANTC 2 cut(s) 45, 77
HpaII CCGG 1 cut(s) 214
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 3 cut(s) 14, 49, 65
Hpy188I TCNGA 1 cut(s) 116
Hpy188III TCNNGA 5 cut(s) 40, 86, 197, 257, 337
Hpy8I GTNNAC 3 cut(s) 14, 49, 65
HpyAV CCTTC 1 cut(s) 224
HpyCH4III ACNGT 1 cut(s) 134
HpyCH4IV ACGT 2 cut(s) 289, 361
HpyCH4V TGCA 2 cut(s) 4, 329
HpySE526I ACGT 2 cut(s) 289, 361
Kzo9I GATC 2 cut(s) 116, 265
LpnPI CCDG 7 cut(s) 99, 131, 197, 219, 227, 237, 242
Lsp1109I GCAGC 2 cut(s) 84, 87
MaeI CTAG 1 cut(s) 281
MaeII ACGT 2 cut(s) 289, 361
MalI GATC 2 cut(s) 118, 267
MboI GATC 2 cut(s) 116, 265
MboII GAAGA 1 cut(s) 323
MluCI AATT 1 cut(s) 192
MlyI GAGTC 1 cut(s) 54
MnlI CCTC 4 cut(s) 37, 49, 85, 184
MseI TTAA 2 cut(s) 162, 180
MspI CCGG 1 cut(s) 214
MssI GTTTAAAC 1 cut(s) 163
MvnI CGCG 1 cut(s) 198
NdeII GATC 2 cut(s) 116, 265
NruI TCGCGA 1 cut(s) 198
PcsI WCGNNNNNNNCGW 1 cut(s) 120
PfeI GAWTC 1 cut(s) 77
PkrI GCNGC 2 cut(s) 99, 102
PleI GAGTC 1 cut(s) 53
PmeI GTTTAAAC 1 cut(s) 163
PpsI GAGTC 1 cut(s) 53
Psp1406I AACGTT 1 cut(s) 289
PspPI GGNCC 1 cut(s) 318
RruI TCGCGA 1 cut(s) 198
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 2 cut(s) 162, 180
SatI GCNGC 2 cut(s) 98, 101
Sau3AI GATC 2 cut(s) 116, 265
Sau96I GGNCC 1 cut(s) 318
SchI GAGTC 1 cut(s) 54
SetI ASST 4 cut(s) 29, 147, 292, 364
SfcI CTRYAG 1 cut(s) 130
SmlI CTYRAG 1 cut(s) 40
SmoI CTYRAG 1 cut(s) 40
Sse9I AATT 1 cut(s) 192
SspMI CTAG 1 cut(s) 281
TaaI ACNGT 1 cut(s) 134
TaiI ACGT 2 cut(s) 292, 364
TaqI TCGA 3 cut(s) 48, 123, 264
TasI AATT 1 cut(s) 192
TfiI GAWTC 1 cut(s) 77
Tru1I TTAA 2 cut(s) 162, 180
Tru9I TTAA 2 cut(s) 162, 180
TseI GCWGC 2 cut(s) 97, 100
TspDTI ATGAA 2 cut(s) 69, 243
XmiI GTMKAC 2 cut(s) 13, 48
XspI CTAG 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.