Rh1BG033800

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0004242
Physical Location & Seq
Forward (+)
4629758 .. 4633407
3650 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG033800.1

Sequence Viewer

Length: 2961 bp
ATGTTAATCTTGTTATGGGTGGCAGAGGGTTTTGTGCCAGAGCCAGAAGGAAATCAACGAATCGAAGATGTAGCTGGAAGATATGTTTCAGATTTTTTATCAAGGTCCTTCTTCCAACACACCAGTGACAAGTCACGACTGGTAATGCATGACCTCATGCATGATCTTGCACAATCTGTGTCTGGCAAAACATTTGTTAGGTTGGAGGAAAATTCAGAGAACCATAAAAAGTCTACAAAAGCTCGGCACTTGTCATATACCCGTGGATCTGAAGATGTATTTCAGAAATTTGAGGCATTCAGTGAGGTGGATTGTTTACGAACCTTTCTACCACTAGACCCATTGCAAGGATTCAATGTGAGTAGCTTAACTGACAAGGTTCCTTGTGATATGATGCCAAAATTAAGATTCCTGCGGGTGCTATCCTTTAGTGGTTATCTCATAGAAAAGTTGCCAGATTCAATTGGCAACTTGAAGCATCTGCGATACCTCAATCTTTCTCATTGTCAAATAGAAGAGCTACCTGAGCCAACAAGCAGTCTATACAATCTGCAGACATTAATTTTATTCAGATGTCGATCGCTTACCATGCTGCCTGCAGACATGGGAAACCTAAGGAATTTACGGCATCTCAATATTCAGGGAACTAGGCTGAAAAGTATGCCTTTGGGAATAGGAAGATTGGTTAACCTTCAAATACTGTCAGATTTTATTGTGGGGAAAGCCATGGGAAAAGGGATTGCAGAATTGAAGGACTTGTCACATCTTGGAGGCTCAGTTTCTATTTTGTGTTTGCATGATGTCAGCAGCGTTAGGGATGCAATTGAGGCCAGATTAGAGGTTAAGAAGCACCTGGATGATTTAGTTTTGGAATGGAGCAGCAGTACTGGTGGTTTGCGAAATGAAGGGATCGAGACAGAGGTGCTTGATGCACTGCAGCTTCATGAAAACCTGAAGAAACTCACCATTAAGTATTATGGAGGTACAAAATTTCCATATTGGATGGGGGATCCTTTGTTCACTAACATGACGTACTTGCATCTCTATGGTTGCATAAAATGCACATCTTTACCACCCCTTGGCCAACTACCTTCTCTTAAAGATCTCATAATTGAAGCAATGCATGGAATACAGCGCGTAGGAATGGATTTTTTTGGGGATGATGATGGTTCCACAATTTTTTTCCCCTCTTTAGAGACTTTGAAATTTGAGGACATGAAAGAATGGGAGAAATGGTCATCTTCAGAAGATGAAAAGATTAAAGGATTTCCCAGCCTTCGGGAGCTTTCCATATTTAGATGTCCCAAGTTAACAAAGTTTACACATGGATTTGCTTCTCTAGAAAAGCTGCACATCAAGAACTGCGGAGCAATAACTACCTTCTCACAGAATCCTGCACTTGGGAATTTGGAACCTGTAGAATTCCCTAGCCTGAATTTGGAACTAGTTCTTGTTGGTTGCAGTGAGCTTGAAAACCTTCCTTTTTCCCTCCCTTTGTTGAAAATGCTTCACATAGAAGGTTGTGAAAAATTGGCTGCACTTCCGTGGATGGTGGAACTTAGTACATTGTACCTGATCGATTCAAATGCTGAATTACTTGGATGGAAGATGGAATTTAGCTCGCTGACCTCTTTGCACCTAACTCATATTCCAGATGTGAAGCATCTACCTGAAGGCTTTATCCAACAGTCTGCAAAACTTGAAAAATTGAGTCTTACAGGCTTTCCTGACCTTGAATATTTGACAGATGACCGAGTTGGACTAGCACACCTTGTATCCCTTCAACGCTTGACAATATCCCAATGTCCTGAGTTTGTTGCTTTGCCTGATGAGCTCCCACCTGTACTTAAATATTTGGATTTGAAACATTGTCCTAGCCTGATGAAGCTGCCTGGTAAACTTCACAACCTTGAGTGTCTTGCAGAGCTGCAGATTGAATGGTGTTCAAAGATTGAAGCATTTCCAGATGTGGGGTTGCCTGACAAACTGAAGCGTCTTGTAATCCGCGAATGTGGTGCTCTGAAGACCCTTCCTCAGGAGCTTCTCTGCAATAACAATTTTCTCGCGTATTTAGAAGTTCATAAATGTCCTTCTCTTGTGTCAGTTCTTGAAGAAGGAAACTTGCCATCAACTCTAACACATATGAAATTTTACTATTGCAAAATTCTGGGATCACTGCCTGAGGGTTTGATGCACAAAGACAATATGACTCTAAAGTACTTGGAGATAGACAACTGTTCCTCTCTCATGTCCTTTCCAAATGGTGAGTTACCAACAGGCCTGGAGCGTCTTGAGATTGGTGATTGCTCTAACTTCCAGACATTGCCATTGAGCCTTCTTAACCTCACGAATCTTGAGACCTTGGAAGTAAAGAGCTGCCCCCTTCTTCAGGACTTTCCAGAGGGTGGATTGCCACCCAACATAAAGTTTGTCACAATTTCCAAATGTAAGAATCTCAAGTCTCTACCTAAATTCTTTCATAAACTCAAATGTCTTCAGAAGTTGGAGATTTCTGGCTGTCCTAGTCTCCTGTCCTTGCCAAAGCAGGGTCTGCCCAGCAGCTTAAGAGTACTTACAGTTACTGATTGTGAAAAGCTTAATCCCATACATCAGTGGAGACTTCACAAACTACCCTCTCTAGATGTTTTCACCATTGGTGAATTTCCTGGCCTGAAGTCCTTTTCAAAAGATTATCCTCTTCCTCACACTTTAACCTCTTTAAGCATTCAAGGACTCCGAGATCTTGAATCCATATCGGAGGTGCTTGAGAATCTCACCTCACTTGAAAAGCTGAGTATCAGGGACTGTGATAAGCTCCAATCTTTGCCAGAGACGGGGCTACCAGCGACAATTTCTACCTTGACAATTCAGAATTGTTTGCTTCTAAAACATCGATGTGAAAAGGACAAAGGAGAAGATTGGTCCAAGATCAAAAACATCCCCTTCGTGAATTCATGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

986

Amino Acids

111.13

Weight (kDa)

6.02

Isoelectric Point (pI)

48.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 2 - 57 7.3e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 131 - 408 8.1e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 247 - 374 7.2e-38 R13L1/DRL21 LRRs
LRR_RPS2 PF23247 338 - 456 5.6e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1079, 2405
AccI GTMKAC 1 cut(s) 233
AccII CGCG 3 cut(s) 1137, 2007, 2066
AciI CCGC 3 cut(s) 415, 1365, 2005
AclWI GGATC 5 cut(s) 274, 917, 1004, 1017, 2179
AcoI YGGCCR 1 cut(s) 1081
AcuI CTGAAG 9 cut(s) 291, 974, 1227, 1692, 2009, 2042, 2372, 2480, 2693
AfaI GTAC 8 cut(s) 886, 985, 1034, 1564, 1571, 1845, 2219, 2571
AflII CTTAAG 1 cut(s) 2563
AhlI ACTAGT 1 cut(s) 1444
AjnI CCWGG 4 cut(s) 852, 1891, 2280, 2665
AleI CACNNNNGTG 2 cut(s) 123, 1543
AloI GAACNNNNNNTCC 2 cut(s) 1001, 1033
Alw21I GWGCWC 2 cut(s) 1836, 2020
Alw26I GTCTC 7 cut(s) 908, 1190, 2351, 2466, 2531, 2611, 2825
AlwI GGATC 5 cut(s) 274, 917, 1004, 1017, 2179
AlwNI CAGNNNCTG 3 cut(s) 2551, 2582, 2805
AoxI GGCC 4 cut(s) 828, 1081, 2278, 2668
AseI ATTAAT 1 cut(s) 560
Asp700I GAANNNNTTC 3 cut(s) 1446, 1476, 1959
AspLEI GCGC 1 cut(s) 1137
AspS9I GGNCC 2 cut(s) 105, 2922
AsuHPI GGTGA 6 cut(s) 955, 2276, 2312, 2641, 2669, 2767
AvaII GGWCC 2 cut(s) 105, 2922
AxyI CCTNAGG 3 cut(s) 614, 2034, 2181
BalI TGGCCA 1 cut(s) 1083
BamHI GGATCC 1 cut(s) 1009
BanII GRGCYC 1 cut(s) 1836
BbsI GAAGAC 2 cut(s) 2030, 2486
Bbv12I GWGCWC 2 cut(s) 1836, 2020
BccI CCATC 6 cut(s) 997, 1160, 1543, 1596, 1603, 2134
BceAI ACGGC 1 cut(s) 641
BcgI CGANNNNNNTGC 4 cut(s) 1568, 1602, 1997, 2031
BciT130I CCWGG 4 cut(s) 854, 1893, 2282, 2667
BciVI GTATCC 1 cut(s) 1786
BcoDI GTCTC 7 cut(s) 908, 1190, 2351, 2466, 2531, 2611, 2825
BcuI ACTAGT 1 cut(s) 1444
BfaI CTAG 9 cut(s) 335, 648, 1340, 1428, 1445, 1763, 1875, 2523, 2639
BfmI CTRYAG 5 cut(s) 551, 597, 935, 1416, 1928
BfrI CTTAAG 1 cut(s) 2563
BfuI GTATCC 1 cut(s) 1786
BglII AGATCT 2 cut(s) 1102, 2740
BmcAI AGTACT 3 cut(s) 886, 2219, 2571
Bme1390I CCNGG 4 cut(s) 854, 1893, 2282, 2667
Bme18I GGWCC 2 cut(s) 105, 2922
BmgT120I GGNCC 2 cut(s) 105, 2922
BmiI GGNNCC 4 cut(s) 381, 1011, 1171, 1413
BmrFI CCNGG 4 cut(s) 854, 1893, 2282, 2667
BmsI GCATC 8 cut(s) 384, 487, 637, 808, 919, 1048, 1672, 2181
BpiI GAAGAC 2 cut(s) 2030, 2486
BpmI CTGGAG 1 cut(s) 2303
Bpu10I CCTNAGC 1 cut(s) 525
BpuEI CTTGAG 5 cut(s) 1931, 2312, 2375, 2441, 2786
Bsa29I ATCGAT 2 cut(s) 1578, 2893
BsaBI GATNNNNATC 1 cut(s) 577
BsaI GGTCTC 1 cut(s) 2351
BsaJI CCNNGG 5 cut(s) 262, 726, 1078, 1544, 2361
BsaXI ACNNNNNCTCC 6 cut(s) 762, 792, 868, 898, 1220, 1250
Bse1I ACTGG 3 cut(s) 123, 144, 892
Bse21I CCTNAGG 3 cut(s) 614, 2034, 2181
Bse3DI GCAATG 3 cut(s) 341, 1125, 2321
Bse8I GATNNNNATC 1 cut(s) 577
BseBI CCWGG 4 cut(s) 854, 1893, 2282, 2667
BseCI ATCGAT 2 cut(s) 1578, 2893
BseDI CCNNGG 5 cut(s) 262, 726, 1078, 1544, 2361
BseGI GGATG 7 cut(s) 823, 862, 1008, 1165, 1554, 1607, 2937
BseJI GATNNNNATC 1 cut(s) 577
BseMI GCAATG 3 cut(s) 341, 1125, 2321
BseMII CTCAG 6 cut(s) 516, 789, 1800, 2048, 2172, 2783
BseNI ACTGG 3 cut(s) 123, 144, 892
BseYI CCCAGC 2 cut(s) 1271, 2555
BsgI GTGCAG 3 cut(s) 1334, 1380, 1521
Bsh1236I CGCG 3 cut(s) 1137, 2007, 2066
Bsh1285I CGRYCG 1 cut(s) 581
BshFI GGCC 4 cut(s) 830, 1083, 2280, 2670
BshVI ATCGAT 2 cut(s) 1578, 2893
BsiEI CGRYCG 1 cut(s) 581
BsiHKAI GWGCWC 2 cut(s) 1836, 2020
BslFI GGGAC 2 cut(s) 1287, 2816
BsmAI GTCTC 7 cut(s) 908, 1190, 2351, 2466, 2531, 2611, 2825
BsmBI CGTCTC 1 cut(s) 2825
BsmFI GGGAC 2 cut(s) 1287, 2816
BsmI GAATGC 2 cut(s) 296, 2724
BsnI GGCC 4 cut(s) 830, 1083, 2280, 2670
Bso31I GGTCTC 1 cut(s) 2351
Bsp1286I GDGCHC 2 cut(s) 1836, 2020
Bsp19I CCATGG 1 cut(s) 726
BspACI CCGC 3 cut(s) 415, 1365, 2005
BspANI GGCC 4 cut(s) 830, 1083, 2280, 2670
BspCNI CTCAG 6 cut(s) 517, 788, 1801, 2047, 2173, 2784
BspDI ATCGAT 2 cut(s) 1578, 2893
BspFNI CGCG 3 cut(s) 1137, 2007, 2066
BspHI TCATGA 1 cut(s) 943
BspLI GGNNCC 4 cut(s) 381, 1011, 1171, 1413
BspMAI CTGCAG 4 cut(s) 555, 601, 939, 1932
BspPI GGATC 5 cut(s) 274, 917, 1004, 1017, 2179
BspQI GCTCTTC 1 cut(s) 510
BspTI CTTAAG 1 cut(s) 2563
BspTNI GGTCTC 1 cut(s) 2351
BsrDI GCAATG 3 cut(s) 341, 1125, 2321
BsrI ACTGG 3 cut(s) 123, 144, 892
BssECI CCNNGG 5 cut(s) 262, 726, 1078, 1544, 2361
BssT1I CCWWGG 3 cut(s) 726, 1078, 2361
Bst2UI CCWGG 4 cut(s) 854, 1893, 2282, 2667
Bst4CI ACNGT 5 cut(s) 702, 1689, 2237, 2578, 2807
Bst6I CTCTTC 2 cut(s) 510, 2703
BstAFI CTTAAG 1 cut(s) 2563
BstAPI GCANNNNNTGC 2 cut(s) 1059, 2551
BstC8I GCNNGC 2 cut(s) 597, 1622
BstDEI CTNAG 8 cut(s) 525, 614, 775, 1559, 1809, 2034, 2181, 2792
BstDSI CCRYGG 3 cut(s) 262, 726, 1544
BstENI CCTNNNNNAGG 2 cut(s) 2033, 2387
BstF5I GGATG 7 cut(s) 823, 862, 1008, 1165, 1554, 1607, 2937
BstFNI CGCG 3 cut(s) 1137, 2007, 2066
BstHHI GCGC 1 cut(s) 1137
BstMAI GTCTC 7 cut(s) 908, 1190, 2351, 2466, 2531, 2611, 2825
BstMCI CGRYCG 1 cut(s) 581
BstMWI GCNNNNNNNGC 6 cut(s) 526, 589, 827, 1059, 1831, 2551
BstNI CCWGG 4 cut(s) 854, 1893, 2282, 2667
BstSCI CCNGG 4 cut(s) 852, 1891, 2280, 2665
BstSFI CTRYAG 5 cut(s) 551, 597, 935, 1416, 1928
BstUI CGCG 3 cut(s) 1137, 2007, 2066
BstV2I GAAGAC 2 cut(s) 2030, 2486
BstX2I RGATCY 4 cut(s) 266, 1009, 1102, 2740
BstYI RGATCY 4 cut(s) 266, 1009, 1102, 2740
Bsu15I ATCGAT 2 cut(s) 1578, 2893
Bsu36I CCTNAGG 3 cut(s) 614, 2034, 2181
BsuI GTATCC 1 cut(s) 1786
BsuRI GGCC 4 cut(s) 830, 1083, 2280, 2670
BsuTUI ATCGAT 2 cut(s) 1578, 2893
BtgI CCRYGG 3 cut(s) 262, 726, 1544
BtsCI GGATG 7 cut(s) 823, 862, 1008, 1165, 1554, 1607, 2937
BtsI GCAGTG 3 cut(s) 932, 1468, 2174
BtsIMutI CAGTG 6 cut(s) 130, 307, 932, 1468, 2174, 2618
Cac8I GCNNGC 2 cut(s) 597, 1622
CaiI CAGNNNCTG 3 cut(s) 2551, 2582, 2805
CciI TCATGA 1 cut(s) 943
CfoI GCGC 1 cut(s) 1137
Cfr13I GGNCC 2 cut(s) 105, 2922
ClaI ATCGAT 2 cut(s) 1578, 2893
CseI GACGC 2 cut(s) 1982, 2276
Csp6I GTAC 8 cut(s) 885, 984, 1033, 1563, 1570, 1844, 2218, 2570
CviQI GTAC 8 cut(s) 885, 984, 1033, 1563, 1570, 1844, 2218, 2570
DdeI CTNAG 8 cut(s) 525, 614, 775, 1559, 1809, 2034, 2181, 2792
EaeI YGGCCR 1 cut(s) 1081
Eam1104I CTCTTC 2 cut(s) 510, 2703
EarI CTCTTC 2 cut(s) 510, 2703
Ecl136II GAGCTC 1 cut(s) 1834
Eco130I CCWWGG 3 cut(s) 726, 1078, 2361
Eco147I AGGCCT 1 cut(s) 2280
Eco24I GRGCYC 1 cut(s) 1836
Eco31I GGTCTC 1 cut(s) 2351
Eco47I GGWCC 2 cut(s) 105, 2922
Eco53kI GAGCTC 1 cut(s) 1834
Eco57I CTGAAG 9 cut(s) 291, 974, 1227, 1692, 2009, 2042, 2372, 2480, 2693
Eco81I CCTNAGG 3 cut(s) 614, 2034, 2181
EcoICRI GAGCTC 1 cut(s) 1834
EcoNI CCTNNNNNAGG 2 cut(s) 2033, 2387
EcoO109I RGGNCCY 1 cut(s) 105
EcoRI GAATTC 2 cut(s) 1421, 2950
EcoRII CCWGG 4 cut(s) 852, 1891, 2280, 2665
EcoT14I CCWWGG 3 cut(s) 726, 1078, 2361
EcoT22I ATGCAT 3 cut(s) 150, 162, 1125
EcoT38I GRGCYC 1 cut(s) 1836
ErhI CCWWGG 3 cut(s) 726, 1078, 2361
Esp3I CGTCTC 1 cut(s) 2825
FalI AAGNNNNNCTT 2 cut(s) 649, 681
FaqI GGGAC 2 cut(s) 1287, 2816
FauI CCCGC 1 cut(s) 408
FauNDI CATATG 1 cut(s) 2142
FblI GTMKAC 1 cut(s) 233
FokI GGATG 7 cut(s) 830, 869, 1015, 1172, 1561, 1614, 2924
FriOI GRGCYC 1 cut(s) 1836
FspBI CTAG 9 cut(s) 335, 648, 1340, 1428, 1445, 1763, 1875, 2523, 2639
GlaI GCGC 1 cut(s) 1136
GsaI CCCAGC 2 cut(s) 1275, 2559
GsuI CTGGAG 1 cut(s) 2303
HaeIII GGCC 4 cut(s) 830, 1083, 2280, 2670
HgaI GACGC 2 cut(s) 1982, 2276
HhaI GCGC 1 cut(s) 1137
Hin6I GCGC 1 cut(s) 1135
HinP1I GCGC 1 cut(s) 1135
HincII GTYRAC 2 cut(s) 688, 1311
HindII GTYRAC 2 cut(s) 688, 1311
HindIII AAGCTT 1 cut(s) 2594
HpaI GTTAAC 2 cut(s) 688, 1311
HphI GGTGA 6 cut(s) 955, 2276, 2312, 2641, 2669, 2767
Hpy166II GTNNAC 7 cut(s) 234, 317, 688, 1020, 1311, 1320, 1898
Hpy8I GTNNAC 7 cut(s) 234, 317, 688, 1020, 1311, 1320, 1898
HpyCH4III ACNGT 5 cut(s) 702, 1689, 2237, 2578, 2807
HpyCH4IV ACGT 1 cut(s) 1031
HpyF10VI GCNNNNNNNGC 6 cut(s) 526, 589, 827, 1059, 1831, 2551
HpyF3I CTNAG 8 cut(s) 525, 614, 775, 1559, 1809, 2034, 2181, 2792
HpySE526I ACGT 1 cut(s) 1031
HspAI GCGC 1 cut(s) 1135
KspAI GTTAAC 2 cut(s) 688, 1311
LguI GCTCTTC 1 cut(s) 510
LmnI GCTCC 7 cut(s) 876, 1282, 1367, 1839, 2038, 2284, 2820
LweI GCATC 8 cut(s) 384, 487, 637, 808, 919, 1048, 1672, 2181
MaeI CTAG 9 cut(s) 335, 648, 1340, 1428, 1445, 1763, 1875, 2523, 2639
MaeII ACGT 1 cut(s) 1031
MaeIII GTNAC 6 cut(s) 125, 132, 759, 2268, 2431, 2578
MfeI CAATTG 2 cut(s) 462, 822
MflI RGATCY 4 cut(s) 266, 1009, 1102, 2740
MhlI GDGCHC 2 cut(s) 1836, 2020
MlsI TGGCCA 1 cut(s) 1083
MluNI TGGCCA 1 cut(s) 1083
MlyI GAGTC 3 cut(s) 1720, 2203, 2727
MmeI TCCRAC 5 cut(s) 139, 183, 1708, 1738, 2484
Mox20I TGGCCA 1 cut(s) 1083
Mph1103I ATGCAT 3 cut(s) 150, 162, 1125
MroXI GAANNNNTTC 3 cut(s) 1446, 1476, 1959
MscI TGGCCA 1 cut(s) 1083
MslI CAYNNNNRTG 6 cut(s) 123, 855, 1025, 1044, 1543, 2895
Msp20I TGGCCA 1 cut(s) 1083
MspCI CTTAAG 1 cut(s) 2563
MspR9I CCNGG 4 cut(s) 854, 1893, 2282, 2667
MunI CAATTG 2 cut(s) 462, 822
Mva1269I GAATGC 2 cut(s) 296, 2724
MvaI CCWGG 4 cut(s) 854, 1893, 2282, 2667
MvnI CGCG 3 cut(s) 1137, 2007, 2066
MwoI GCNNNNNNNGC 6 cut(s) 526, 589, 827, 1059, 1831, 2551
NcoI CCATGG 1 cut(s) 726
NdeI CATATG 1 cut(s) 2142
NlaIV GGNNCC 4 cut(s) 381, 1011, 1171, 1413
NmeAIII GCCGAG 1 cut(s) 223
NmuCI GTSAC 4 cut(s) 125, 132, 759, 2431
NsiI ATGCAT 3 cut(s) 150, 162, 1125
OliI CACNNNNGTG 2 cut(s) 123, 1543
PagI TCATGA 1 cut(s) 943
PceI AGGCCT 1 cut(s) 2280
PciSI GCTCTTC 1 cut(s) 510
PctI GAATGC 2 cut(s) 296, 2724
PdmI GAANNNNTTC 3 cut(s) 1446, 1476, 1959
PflMI CCANNNNNTGG 2 cut(s) 1079, 2405
Ple19I CGATCG 1 cut(s) 581
PleI GAGTC 3 cut(s) 1719, 2203, 2727
PpsI GAGTC 3 cut(s) 1719, 2203, 2727
PpuMI RGGWCCY 1 cut(s) 105
PshBI ATTAAT 1 cut(s) 560
Psp124BI GAGCTC 1 cut(s) 1836
Psp5II RGGWCCY 1 cut(s) 105
Psp6I CCWGG 4 cut(s) 852, 1891, 2280, 2665
PspFI CCCAGC 2 cut(s) 1271, 2555
PspGI CCWGG 4 cut(s) 852, 1891, 2280, 2665
PspN4I GGNNCC 4 cut(s) 381, 1011, 1171, 1413
PspPI GGNCC 2 cut(s) 105, 2922
PspPPI RGGWCCY 1 cut(s) 105
PstI CTGCAG 4 cut(s) 555, 601, 939, 1932
PstNI CAGNNNCTG 3 cut(s) 2551, 2582, 2805
PsuI RGATCY 4 cut(s) 266, 1009, 1102, 2740
PvuI CGATCG 1 cut(s) 581
RsaI GTAC 8 cut(s) 886, 985, 1034, 1564, 1571, 1845, 2219, 2571
RsaNI GTAC 8 cut(s) 885, 984, 1033, 1563, 1570, 1844, 2218, 2570
RseI CAYNNNNRTG 6 cut(s) 123, 855, 1025, 1044, 1543, 2895
SacI GAGCTC 1 cut(s) 1836
SapI GCTCTTC 1 cut(s) 510
Sau96I GGNCC 2 cut(s) 105, 2922
ScaI AGTACT 3 cut(s) 886, 2219, 2571
SchI GAGTC 3 cut(s) 1720, 2203, 2727
ScrFI CCNGG 4 cut(s) 854, 1893, 2282, 2667
SduI GDGCHC 2 cut(s) 1836, 2020
SfaNI GCATC 8 cut(s) 384, 487, 637, 808, 919, 1048, 1672, 2181
SfcI CTRYAG 5 cut(s) 551, 597, 935, 1416, 1928
SinI GGWCC 2 cut(s) 105, 2922
SmiMI CAYNNNNRTG 6 cut(s) 123, 855, 1025, 1044, 1543, 2895
SmlI CTYRAG 6 cut(s) 1910, 2291, 2354, 2456, 2563, 2765
SmoI CTYRAG 6 cut(s) 1910, 2291, 2354, 2456, 2563, 2765
SpeI ACTAGT 1 cut(s) 1444
SseBI AGGCCT 1 cut(s) 2280
SsiI CCGC 3 cut(s) 415, 1365, 2005
SspI AATATT 3 cut(s) 637, 1739, 1853
SspMI CTAG 9 cut(s) 335, 648, 1340, 1428, 1445, 1763, 1875, 2523, 2639
SstI GAGCTC 1 cut(s) 1836
StuI AGGCCT 1 cut(s) 2280
StyD4I CCNGG 4 cut(s) 852, 1891, 2280, 2665
StyI CCWWGG 3 cut(s) 726, 1078, 2361
TaaI ACNGT 5 cut(s) 702, 1689, 2237, 2578, 2807
TaiI ACGT 1 cut(s) 1034
TaqI TCGA 5 cut(s) 63, 577, 912, 1578, 2893
TaqII GACCGA 1 cut(s) 1767
TatI WGTACW 5 cut(s) 884, 1562, 1843, 2217, 2569
TscAI CASTG 6 cut(s) 130, 307, 939, 1468, 2181, 2618
TseFI GTSAC 4 cut(s) 125, 132, 759, 2431
Tsp45I GTSAC 4 cut(s) 125, 132, 759, 2431
TspGWI ACGGA 1 cut(s) 1533
TspRI CASTG 6 cut(s) 130, 307, 939, 1468, 2181, 2618
Van91I CCANNNNNTGG 2 cut(s) 1079, 2405
Vha464I CTTAAG 1 cut(s) 2563
VpaK11BI GGWCC 2 cut(s) 105, 2922
VspI ATTAAT 1 cut(s) 560
XagI CCTNNNNNAGG 2 cut(s) 2033, 2387
XbaI TCTAGA 2 cut(s) 1339, 2638
XmiI GTMKAC 1 cut(s) 233
XmnI GAANNNNTTC 3 cut(s) 1446, 1476, 1959
XspI CTAG 9 cut(s) 335, 648, 1340, 1428, 1445, 1763, 1875, 2523, 2639
ZrmI AGTACT 3 cut(s) 886, 2219, 2571
Zsp2I ATGCAT 3 cut(s) 150, 162, 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.