Rh1DG033700

disease resistance

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0004242
Physical Location & Seq
Reverse (-)
4945768 .. 4950306
4539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG033700.1

Sequence Viewer

Length: 2175 bp
ATGCCTATTGTTCGAGCACTTGAATCTGCTTCTGTAAGCATCCTCCTTAACAAGTTGGCCACTCGAGATGTCATAGATTTCTTCCTCAAGTGGGAAATTGATGATTCCCTGCGAGAAAAGCTCAAGAGAAACCTGCTTGTCATTCATGCAGTTCTCAATCATGCTGAGGAGAAGCAAGTCCGGGACTCAAATGTCAAAGCTTGGCTCGAGGACGTCAGAGTTGCAGCTTATGATGCTGAGGACATATTGGATGACATCGCCAATGATGCTCTCGAATCACAAAACAGCAAACATGAGGTATGGAATTCTAAGATCAAAGAAGGGATAGACTTTAAGATCAAAGACATTGCTAATACTCTTAATCCTTTTAGAGAACGTGTAGAGTCGAAAATGATAAAGATTATAGATGTATTGGAAGAGATTGCAAAACAGAAAGATATTCTTCGTTTGAGAGAAGATTCTGGCGGTATAGAATCAGGTTTTGACGGATTGCCCACGACTCCAATGTTGGGTGATGAATCTCATGTTTATGGTAGAGAATCTGATAAGAAGGAGATAATTACTTTGCTGAATTTGGGTGGAAATGATGATGGGGTTTCTATAATCCCAGTTGTAGGCATGGGAGAAAAGCTGCTCATCAAGAACTGCGGAGCAATAACTACCTTCTCACAGAATCCTGCACTTGGGAATTTGGAACCTGTAGAATTCCCTAGCCTGAATTTGGAACCTGTAGAATTCCCTAGCCTGCAACTGCTTGTTCTTGTTGCTTGCAGTGAGCTTGAAAACCTTCCTTTTTCCCTCCCTTTGTTGAAAATGCTTTACATAGAGGGTTGTAAAAAATTGGCTGCACTTCCGAGGATGGTGGAACTTAGTACATTGTACCTGATCGATTCAAATGCTGAATTACTTGGATCCATGATGGAATTTAGCTCGCTGACCTCTTTGCACCTAACTGATATTCCAGATGTGAAGCATCTACCTGAAGGCTTTATCCAACAGTCTGCAAAACTTGAAAAATTGAGTCTTACAAGCTTTCCTGACCTTGAATATTTGGCAGATGACCGAGTTGGACTAGCACACCTTGTATCCCTTCAACGCTTGACAATATCCCATTGTCCTAAGTTTGTTGCTTTGCCTGATGAGCTCCCACCTGTACTTAAATATTTGGATTTGAAACATTGTCCTAGCCTGATGAAGCTGCCTGGTAAACTTCACAACCTTGAGTGTCTTGCAGAGCTGCAGATTGAATGGTGTTCAAAGATTGAAGCATTTCCAGATGTGGGGTTGCCTGACAAACTGAAGCGTCTTCTAATCCGCGAATGTGGTGCTCTGAAGACCCTTCCTCAGGAGCTTCTCTGCAATAACAATTTTCTCGAGTATTTAGAAGTTCATAAATGTCCTTCTCTTGTGTCAGTTCTTGAAGAAGGAAACTTGCCATCAACTCTAACACATATGAAATTTTACTATTGCAAAATTCTGGGATCACTGCCTGAGGGTTTGATGCACAAAGACAATATGACTCTAAAGTACTTGGAGATAGACAACTGTTCCTCTCTCATGTCCTTTCCAAATGGTGAGTTACCAACAAGCCTTGAGCGTCTTGAGATTAGTGATTGCTCTAATTTCCAGACATTGCCATTGAGCCTTCTCAACCTCACGAATCTTGAGACCTTGGAAGTAAAGAGCTGCCCCCTTCTTCAGGACTTTCCAGAGGGTGGATTGCCACCCAACATAAAGTTTGTCACAATTTCCGAATGTAAGAATCTCAAGTCTCTACCTAAATTCTTTCATAAACTCAAATGTCTTCAGAAGTTGGAGATTTCTGGCTGTCCTAGTCTCCTGTCCTTGCCAAAGCAGGGTCTGCCCAGCAGCTTAAGACTACTTACAGTTACTGATTGTGAAAAGCTTAATCCCATTCATCGGTGGAGACTTCACAAACTACCCTCTCTAGATGTTTTCACCATTGGTGGATTTCCTGGCCTGAAGTCCTTTTCAAAAGATTATCCTCTTCCTCACACTTTAACCTCTTTAAGCATTCAAAGATTCCCAGATCTTGAATCCATATCGGAGATCATTAGAAACAGAGAAGTTGTGTCAGTTACTACATCTTTCATGATCAATCCAGAAGTACTTGCTAGATCCCATTCTGTACCAGAATCTATAGCTGGAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

724

Amino Acids

81.06

Weight (kDa)

5.36

Isoelectric Point (pI)

48.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 12 - 98 2.6e-17 Rx N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 191
AatII GACGTC 1 cut(s) 216
Acc36I ACCTGC 1 cut(s) 141
AccB7I CCANNNNNTGG 1 cut(s) 1715
AccII CGCG 1 cut(s) 1317
AciI CCGC 3 cut(s) 465, 648, 1315
AclWI GGATC 4 cut(s) 906, 919, 1489, 2133
AcoI YGGCCR 1 cut(s) 57
AcuI CTGAAG 6 cut(s) 1002, 1319, 1352, 1682, 1790, 2003
AcyI GRCGYC 1 cut(s) 213
AfaI GTAC 6 cut(s) 874, 881, 1155, 1529, 2130, 2151
AflII CTTAAG 1 cut(s) 1873
AflIII ACRYGT 1 cut(s) 376
AjnI CCWGG 2 cut(s) 1201, 1975
Alw21I GWGCWC 3 cut(s) 19, 1146, 1330
Alw26I GTCTC 4 cut(s) 1661, 1776, 1841, 1921
AlwI GGATC 4 cut(s) 906, 919, 1489, 2133
AlwNI CAGNNNCTG 2 cut(s) 1861, 1892
Ama87I CYCGRG 3 cut(s) 63, 206, 1373
AoxI GGCC 2 cut(s) 57, 1978
ApeKI GCWGC 7 cut(s) 224, 631, 845, 1198, 1237, 1686, 1869
Asp700I GAANNNNTTC 2 cut(s) 786, 1269
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 3 cut(s) 524, 1586, 1951
AvaI CYCGRG 3 cut(s) 63, 206, 1373
AxyI CCTNAGG 2 cut(s) 1344, 1491
BalI TGGCCA 1 cut(s) 59
BamHI GGATCC 1 cut(s) 911
BanII GRGCYC 1 cut(s) 1146
BbsI GAAGAC 3 cut(s) 1298, 1340, 1796
Bbv12I GWGCWC 3 cut(s) 19, 1146, 1330
BbvCI CCTCAGC 2 cut(s) 165, 237
BbvI GCAGC 7 cut(s) 236, 618, 832, 1185, 1224, 1673, 1881
BccI CCATC 4 cut(s) 584, 853, 913, 1444
BcgI CGANNNNNNTGC 4 cut(s) 878, 912, 1307, 1341
BciT130I CCWGG 2 cut(s) 1203, 1977
BciVI GTATCC 1 cut(s) 1096
BclI TGATCA 1 cut(s) 2115
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 4 cut(s) 1661, 1776, 1841, 1921
BfaI CTAG 7 cut(s) 711, 741, 1073, 1185, 1833, 1949, 2136
BfmI CTRYAG 4 cut(s) 699, 729, 1238, 2160
BfrI CTTAAG 1 cut(s) 1873
BfuAI ACCTGC 1 cut(s) 141
BfuI GTATCC 1 cut(s) 1096
BglII AGATCT 1 cut(s) 2050
BisI GCNGC 7 cut(s) 225, 632, 846, 1199, 1238, 1687, 1870
BlsI GCNGC 7 cut(s) 226, 633, 847, 1200, 1239, 1688, 1871
BmcAI AGTACT 2 cut(s) 1529, 2130
Bme1390I CCNGG 3 cut(s) 182, 1203, 1977
BmeT110I CYCGRG 3 cut(s) 63, 206, 1373
BmiI GGNNCC 3 cut(s) 696, 726, 913
BmrFI CCNGG 3 cut(s) 182, 1203, 1977
BmrI ACTGGG 1 cut(s) 602
BmsI GCATC 5 cut(s) 48, 223, 256, 982, 1491
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 3 cut(s) 1298, 1340, 1796
BplI GAGNNNNNCTC 2 cut(s) 105, 137
Bpu10I CCTNAGC 2 cut(s) 165, 237
BpuEI CTTGAG 7 cut(s) 71, 107, 1241, 1613, 1622, 1685, 1751
BpuMI CCSGG 1 cut(s) 182
Bsa29I ATCGAT 1 cut(s) 888
BsaHI GRCGYC 1 cut(s) 213
BsaI GGTCTC 1 cut(s) 1661
BsaJI CCNNGG 2 cut(s) 854, 1671
Bse1I ACTGG 1 cut(s) 608
Bse21I CCTNAGG 2 cut(s) 1344, 1491
Bse3DI GCAATG 2 cut(s) 345, 1631
BseBI CCWGG 2 cut(s) 1203, 1977
BseCI ATCGAT 1 cut(s) 888
BseDI CCNNGG 2 cut(s) 854, 1671
BseGI GGATG 3 cut(s) 39, 256, 864
BseMI GCAATG 2 cut(s) 345, 1631
BseMII CTCAG 4 cut(s) 156, 228, 1358, 1482
BseNI ACTGG 1 cut(s) 608
BseRI GAGGAG 1 cut(s) 182
BseXI GCAGC 7 cut(s) 236, 618, 832, 1185, 1224, 1673, 1881
BseYI CCCAGC 1 cut(s) 1865
BsgI GTGCAG 2 cut(s) 663, 831
Bsh1236I CGCG 1 cut(s) 1317
BshFI GGCC 2 cut(s) 59, 1980
BshVI ATCGAT 1 cut(s) 888
BsiHKAI GWGCWC 3 cut(s) 19, 1146, 1330
BsiHKCI CYCGRG 3 cut(s) 63, 206, 1373
BsiSI CCGG 1 cut(s) 181
BslFI GGGAC 1 cut(s) 197
BsmAI GTCTC 4 cut(s) 1661, 1776, 1841, 1921
BsmFI GGGAC 1 cut(s) 197
BsmI GAATGC 1 cut(s) 2034
BsnI GGCC 2 cut(s) 59, 1980
Bso31I GGTCTC 1 cut(s) 1661
BsoBI CYCGRG 3 cut(s) 63, 206, 1373
Bsp1286I GDGCHC 3 cut(s) 19, 1146, 1330
Bsp143I GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
BspACI CCGC 3 cut(s) 465, 648, 1315
BspANI GGCC 2 cut(s) 59, 1980
BspCNI CTCAG 4 cut(s) 157, 229, 1357, 1483
BspDI ATCGAT 1 cut(s) 888
BspFNI CGCG 1 cut(s) 1317
BspHI TCATGA 1 cut(s) 2112
BspLI GGNNCC 3 cut(s) 696, 726, 913
BspMAI CTGCAG 1 cut(s) 1242
BspMI ACCTGC 1 cut(s) 141
BspPI GGATC 4 cut(s) 906, 919, 1489, 2133
BspTI CTTAAG 1 cut(s) 1873
BspTNI GGTCTC 1 cut(s) 1661
BsrDI GCAATG 2 cut(s) 345, 1631
BsrI ACTGG 1 cut(s) 608
BssECI CCNNGG 2 cut(s) 854, 1671
BssMI GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
BssNI GRCGYC 1 cut(s) 213
BssT1I CCWWGG 1 cut(s) 1671
Bst2UI CCWGG 2 cut(s) 1203, 1977
Bst4CI ACNGT 3 cut(s) 999, 1547, 1888
Bst6I CTCTTC 2 cut(s) 411, 2013
BstACI GRCGYC 1 cut(s) 213
BstAFI CTTAAG 1 cut(s) 1873
BstAPI GCANNNNNTGC 1 cut(s) 1861
BstC8I GCNNGC 3 cut(s) 746, 769, 932
BstDEI CTNAG 7 cut(s) 165, 237, 309, 869, 1119, 1344, 1491
BstENI CCTNNNNNAGG 2 cut(s) 1343, 1697
BstF5I GGATG 3 cut(s) 39, 256, 864
BstFNI CGCG 1 cut(s) 1317
BstKTI GATC 9 cut(s) 315, 339, 888, 914, 1484, 2053, 2073, 2118, 2141
BstMAI GTCTC 4 cut(s) 1661, 1776, 1841, 1921
BstMBI GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
BstMWI GCNNNNNNNGC 5 cut(s) 118, 233, 266, 1141, 1861
BstNI CCWGG 2 cut(s) 1203, 1977
BstSCI CCNGG 3 cut(s) 180, 1201, 1975
BstSFI CTRYAG 4 cut(s) 699, 729, 1238, 2160
BstUI CGCG 1 cut(s) 1317
BstV1I GCAGC 7 cut(s) 236, 618, 832, 1185, 1224, 1673, 1881
BstV2I GAAGAC 3 cut(s) 1298, 1340, 1796
BstX2I RGATCY 3 cut(s) 911, 2050, 2138
BstYI RGATCY 3 cut(s) 911, 2050, 2138
Bsu15I ATCGAT 1 cut(s) 888
Bsu36I CCTNAGG 2 cut(s) 1344, 1491
BsuI GTATCC 1 cut(s) 1096
BsuRI GGCC 2 cut(s) 59, 1980
BsuTUI ATCGAT 1 cut(s) 888
BtgZI GCGATG 1 cut(s) 241
BtsCI GGATG 3 cut(s) 39, 256, 864
BtsI GCAGTG 2 cut(s) 778, 1484
BtsIMutI CAGTG 2 cut(s) 778, 1484
BveI ACCTGC 1 cut(s) 141
Cac8I GCNNGC 3 cut(s) 746, 769, 932
CaiI CAGNNNCTG 2 cut(s) 1861, 1892
CciI TCATGA 1 cut(s) 2112
ClaI ATCGAT 1 cut(s) 888
CseI GACGC 2 cut(s) 1292, 1586
Csp6I GTAC 6 cut(s) 873, 880, 1154, 1528, 2129, 2150
CviAII CATG 8 cut(s) 146, 161, 293, 524, 619, 916, 1558, 2113
CviQI GTAC 6 cut(s) 873, 880, 1154, 1528, 2129, 2150
DdeI CTNAG 7 cut(s) 165, 237, 309, 869, 1119, 1344, 1491
DpnI GATC 9 cut(s) 314, 338, 887, 913, 1483, 2052, 2072, 2117, 2140
DpnII GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
DrdI GACNNNNNNGTC 1 cut(s) 191
DseDI GACNNNNNNGTC 1 cut(s) 191
EaeI YGGCCR 1 cut(s) 57
Eam1104I CTCTTC 2 cut(s) 411, 2013
EarI CTCTTC 2 cut(s) 411, 2013
Ecl136II GAGCTC 1 cut(s) 1144
Eco130I CCWWGG 1 cut(s) 1671
Eco24I GRGCYC 1 cut(s) 1146
Eco31I GGTCTC 1 cut(s) 1661
Eco53kI GAGCTC 1 cut(s) 1144
Eco57I CTGAAG 6 cut(s) 1002, 1319, 1352, 1682, 1790, 2003
Eco81I CCTNAGG 2 cut(s) 1344, 1491
Eco88I CYCGRG 3 cut(s) 63, 206, 1373
EcoICRI GAGCTC 1 cut(s) 1144
EcoNI CCTNNNNNAGG 2 cut(s) 1343, 1697
EcoRI GAATTC 3 cut(s) 304, 704, 734
EcoRII CCWGG 2 cut(s) 1201, 1975
EcoT14I CCWWGG 1 cut(s) 1671
EcoT38I GRGCYC 1 cut(s) 1146
ErhI CCWWGG 1 cut(s) 1671
FaeI CATG 8 cut(s) 149, 164, 296, 527, 622, 919, 1561, 2116
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FaqI GGGAC 1 cut(s) 197
FatI CATG 8 cut(s) 145, 160, 292, 523, 618, 915, 1557, 2112
FauNDI CATATG 1 cut(s) 1452
FbaI TGATCA 1 cut(s) 2115
Fnu4HI GCNGC 7 cut(s) 225, 632, 846, 1199, 1238, 1687, 1870
FokI GGATG 3 cut(s) 26, 263, 871
FriOI GRGCYC 1 cut(s) 1146
Fsp4HI GCNGC 7 cut(s) 225, 632, 846, 1199, 1238, 1687, 1870
FspBI CTAG 7 cut(s) 711, 741, 1073, 1185, 1833, 1949, 2136
GluI GCNGC 7 cut(s) 225, 632, 846, 1199, 1238, 1687, 1870
GsaI CCCAGC 1 cut(s) 1869
HaeIII GGCC 2 cut(s) 59, 1980
HapII CCGG 1 cut(s) 181
HgaI GACGC 2 cut(s) 1292, 1586
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 8 cut(s) 149, 164, 296, 527, 622, 919, 1561, 2116
HindIII AAGCTT 3 cut(s) 198, 1030, 1904
HpaII CCGG 1 cut(s) 181
HphI GGTGA 3 cut(s) 524, 1586, 1951
Hpy166II GTNNAC 1 cut(s) 1208
Hpy188I TCNGA 7 cut(s) 218, 544, 855, 1332, 1753, 1809, 2068
Hpy8I GTNNAC 1 cut(s) 1208
HpyCH4III ACNGT 3 cut(s) 999, 1547, 1888
HpyCH4IV ACGT 2 cut(s) 213, 376
HpyF10VI GCNNNNNNNGC 5 cut(s) 118, 233, 266, 1141, 1861
HpyF3I CTNAG 7 cut(s) 165, 237, 309, 869, 1119, 1344, 1491
HpySE526I ACGT 2 cut(s) 213, 376
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 8 cut(s) 149, 164, 296, 527, 622, 919, 1561, 2116
Ksp22I TGATCA 1 cut(s) 2115
Kzo9I GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
LmnI GCTCC 3 cut(s) 650, 1149, 1348
Lsp1109I GCAGC 7 cut(s) 236, 618, 832, 1185, 1224, 1673, 1881
LweI GCATC 5 cut(s) 48, 223, 256, 982, 1491
MaeI CTAG 7 cut(s) 711, 741, 1073, 1185, 1833, 1949, 2136
MaeII ACGT 2 cut(s) 213, 376
MaeIII GTNAC 4 cut(s) 1578, 1741, 1888, 2098
MalI GATC 9 cut(s) 314, 338, 887, 913, 1483, 2052, 2072, 2117, 2140
MboI GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
MflI RGATCY 3 cut(s) 911, 2050, 2138
MhlI GDGCHC 3 cut(s) 19, 1146, 1330
MlsI TGGCCA 1 cut(s) 59
MluNI TGGCCA 1 cut(s) 59
MlyI GAGTC 5 cut(s) 179, 392, 493, 1030, 1513
MmeI TCCRAC 3 cut(s) 1018, 1048, 1794
Mox20I TGGCCA 1 cut(s) 59
MroXI GAANNNNTTC 2 cut(s) 786, 1269
MscI TGGCCA 1 cut(s) 59
MseI TTAA 8 cut(s) 48, 333, 360, 1158, 1874, 1908, 2021, 2030
MslI CAYNNNNRTG 1 cut(s) 528
Msp20I TGGCCA 1 cut(s) 59
MspCI CTTAAG 1 cut(s) 1873
MspI CCGG 1 cut(s) 181
MspR9I CCNGG 3 cut(s) 182, 1203, 1977
Mva1269I GAATGC 1 cut(s) 2034
MvaI CCWGG 2 cut(s) 1203, 1977
MvnI CGCG 1 cut(s) 1317
MwoI GCNNNNNNNGC 5 cut(s) 118, 233, 266, 1141, 1861
NciI CCSGG 1 cut(s) 182
NdeI CATATG 1 cut(s) 1452
NdeII GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
NlaIII CATG 8 cut(s) 149, 164, 296, 527, 622, 919, 1561, 2116
NlaIV GGNNCC 3 cut(s) 696, 726, 913
NmuCI GTSAC 1 cut(s) 1741
PaeR7I CTCGAG 3 cut(s) 63, 206, 1373
PagI TCATGA 1 cut(s) 2112
PctI GAATGC 1 cut(s) 2034
PdmI GAANNNNTTC 2 cut(s) 786, 1269
PflMI CCANNNNNTGG 1 cut(s) 1715
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 7 cut(s) 226, 633, 847, 1200, 1239, 1688, 1871
PleI GAGTC 5 cut(s) 179, 391, 493, 1029, 1513
PpsI GAGTC 5 cut(s) 179, 391, 493, 1029, 1513
Psp124BI GAGCTC 1 cut(s) 1146
Psp6I CCWGG 2 cut(s) 1201, 1975
PspFI CCCAGC 1 cut(s) 1865
PspGI CCWGG 2 cut(s) 1201, 1975
PspN4I GGNNCC 3 cut(s) 696, 726, 913
PspXI VCTCGAGB 1 cut(s) 206
PstI CTGCAG 1 cut(s) 1242
PstNI CAGNNNCTG 2 cut(s) 1861, 1892
PsuI RGATCY 3 cut(s) 911, 2050, 2138
RsaI GTAC 6 cut(s) 874, 881, 1155, 1529, 2130, 2151
RsaNI GTAC 6 cut(s) 873, 880, 1154, 1528, 2129, 2150
RseI CAYNNNNRTG 1 cut(s) 528
SacI GAGCTC 1 cut(s) 1146
SaqAI TTAA 8 cut(s) 48, 333, 360, 1158, 1874, 1908, 2021, 2030
SatI GCNGC 7 cut(s) 225, 632, 846, 1199, 1238, 1687, 1870
Sau3AI GATC 9 cut(s) 312, 336, 885, 911, 1481, 2050, 2070, 2115, 2138
ScaI AGTACT 2 cut(s) 1529, 2130
SchI GAGTC 5 cut(s) 179, 392, 493, 1030, 1513
ScrFI CCNGG 3 cut(s) 182, 1203, 1977
SduI GDGCHC 3 cut(s) 19, 1146, 1330
SfaNI GCATC 5 cut(s) 48, 223, 256, 982, 1491
SfcI CTRYAG 4 cut(s) 699, 729, 1238, 2160
Sfr274I CTCGAG 3 cut(s) 63, 206, 1373
SlaI CTCGAG 3 cut(s) 63, 206, 1373
SmiMI CAYNNNNRTG 1 cut(s) 528
SsiI CCGC 3 cut(s) 465, 648, 1315
SspI AATATT 2 cut(s) 1049, 1163
SspMI CTAG 7 cut(s) 711, 741, 1073, 1185, 1833, 1949, 2136
SstI GAGCTC 1 cut(s) 1146
StyD4I CCNGG 3 cut(s) 180, 1201, 1975
StyI CCWWGG 1 cut(s) 1671
TaaI ACNGT 3 cut(s) 999, 1547, 1888
TaiI ACGT 2 cut(s) 216, 379
TaqI TCGA 7 cut(s) 13, 64, 207, 273, 386, 888, 1374
TaqII GACCGA 1 cut(s) 1077
TatI WGTACW 4 cut(s) 872, 1153, 1527, 2128
Tru1I TTAA 8 cut(s) 48, 333, 360, 1158, 1874, 1908, 2021, 2030
Tru9I TTAA 8 cut(s) 48, 333, 360, 1158, 1874, 1908, 2021, 2030
TscAI CASTG 2 cut(s) 778, 1491
TseFI GTSAC 1 cut(s) 1741
TseI GCWGC 7 cut(s) 224, 631, 845, 1198, 1237, 1686, 1869
Tsp45I GTSAC 1 cut(s) 1741
TspDTI ATGAA 8 cut(s) 134, 531, 1208, 1379, 1469, 1778, 1907, 2101
TspGWI ACGGA 1 cut(s) 501
TspRI CASTG 2 cut(s) 778, 1491
Van91I CCANNNNNTGG 1 cut(s) 1715
Vha464I CTTAAG 1 cut(s) 1873
XagI CCTNNNNNAGG 2 cut(s) 1343, 1697
XbaI TCTAGA 1 cut(s) 1948
XhoI CTCGAG 3 cut(s) 63, 206, 1373
XmnI GAANNNNTTC 2 cut(s) 786, 1269
XspI CTAG 7 cut(s) 711, 741, 1073, 1185, 1833, 1949, 2136
ZraI GACGTC 1 cut(s) 214
ZrmI AGTACT 2 cut(s) 1529, 2130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.