No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 |
| fragaria_vesca | FvH4_7g06090 FvH4_7g06090 |
| malus_domestica | MD00G1168200.v1.1 MD00G1168400.v1.1 MD03G1024600.v1.1 MD03G1025200.v1.1 MD03G1025800.v1.1 MD11G1029700.v1.1 MD11G1030200.v1.1 |
| prunus_persica | Prupe.5G032900_v2.0.a1 Prupe.5G032900_v2.0.a1 Prupe.7G022200_v2.0.a1 |
| pyrus_communis | pycom03g02140 pycom03g02150 pycom11g02320 pycom11g02330 |
| rosa_chinensis | RchiOBHm_Chr1g0333641 |
| rosa_laevigata | RLG00000029543 |
| rosa_multiflora | Rmu_sc0002955.1_g000032 Rmu_sc0004487.1_g000019 Rmu_sc0004487.1_g000020 Rmu_sc0038804.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317360 |
| rosa_rugosa | Rorug01G0110700 Rorug01G0110800 |
| rosa_samantha | Rh1AG133300 Rh1BG102000 Rh1CG127500 Rh1DG139500 |
| rosa_wichuraiana | Rw0G003340 Rw1G011110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 3686, 3840 |
| AatII | GACGTC | 1 cut(s) | 1747 |
| AccI | GTMKAC | 4 cut(s) | 2849, 3044, 5202, 5314 |
| AccII | CGCG | 2 cut(s) | 146, 193 |
| AciI | CCGC | 8 cut(s) | 193, 344, 459, 1454, 1638, 2541, 3612, 4244 |
| AcoI | YGGCCR | 1 cut(s) | 2113 |
| AcsI | RAATTY | 7 cut(s) | 586, 805, 1154, 1940, 4018, 4340, 5327 |
| AcyI | GRCGYC | 1 cut(s) | 1744 |
| AfaI | GTAC | 8 cut(s) | 787, 889, 1009, 3669, 4490, 5156, 5197, 5388 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 212, 535, 782, 1148, 2156, 5133 |
| AflII | CTTAAG | 1 cut(s) | 1411 |
| AflIII | ACRYGT | 4 cut(s) | 1969, 2076, 3145, 3622 |
| AhlI | ACTAGT | 1 cut(s) | 5240 |
| AjnI | CCWGG | 7 cut(s) | 60, 2352, 2755, 3151, 4381, 4665, 5358 |
| AleI | CACNNNNGTG | 1 cut(s) | 825 |
| Alw21I | GWGCWC | 4 cut(s) | 1966, 2829, 3619, 4130 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 163, 1339, 5138 |
| Ama87I | CYCGRG | 1 cut(s) | 4440 |
| AoxI | GGCC | 9 cut(s) | 63, 75, 526, 1931, 2113, 2753, 4464, 4534, 4662 |
| ApaI | GGGCCC | 1 cut(s) | 1935 |
| ApoI | RAATTY | 7 cut(s) | 586, 805, 1154, 1940, 4018, 4340, 5327 |
| AseI | ATTAAT | 1 cut(s) | 3921 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2968, 4093 |
| AspA2I | CCTAGG | 1 cut(s) | 5096 |
| AspLEI | GCGC | 1 cut(s) | 4917 |
| AsuC2I | CCSGG | 2 cut(s) | 2624, 4136 |
| AsuHPI | GGTGA | 8 cut(s) | 248, 1605, 2041, 2340, 2909, 2985, 4233, 4570 |
| AsuII | TTCGAA | 1 cut(s) | 1000 |
| AsuNHI | GCTAGC | 1 cut(s) | 268 |
| AvaI | CYCGRG | 1 cut(s) | 4440 |
| AvaII | GGWCC | 4 cut(s) | 1505, 2404, 3481, 3909 |
| AvrII | CCTAGG | 1 cut(s) | 5096 |
| AxyI | CCTNAGG | 1 cut(s) | 1617 |
| BaeGI | GKGCMC | 1 cut(s) | 1935 |
| BalI | TGGCCA | 1 cut(s) | 2115 |
| BamHI | GGATCC | 1 cut(s) | 2769 |
| BanII | GRGCYC | 4 cut(s) | 991, 1935, 2829, 4130 |
| BbsI | GAAGAC | 3 cut(s) | 3485, 5243, 5298 |
| Bbv12I | GWGCWC | 4 cut(s) | 1966, 2829, 3619, 4130 |
| BceAI | ACGGC | 2 cut(s) | 2411, 2482 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2501, 2535 |
| BciT130I | CCWGG | 7 cut(s) | 62, 2354, 2757, 3153, 4383, 4667, 5360 |
| BciVI | GTATCC | 1 cut(s) | 2241 |
| BclI | TGATCA | 3 cut(s) | 1725, 2578, 3375 |
| BcnI | CCSGG | 2 cut(s) | 2624, 4136 |
| BcuI | ACTAGT | 1 cut(s) | 5240 |
| BfmI | CTRYAG | 7 cut(s) | 249, 1128, 2943, 3863, 4626, 4790, 5199 |
| BfrI | CTTAAG | 1 cut(s) | 1411 |
| BfuI | GTATCC | 1 cut(s) | 2241 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4670 |
| BglII | AGATCT | 6 cut(s) | 30, 394, 968, 1205, 2099, 3901 |
| BlnI | CCTAGG | 1 cut(s) | 5096 |
| BmcAI | AGTACT | 3 cut(s) | 3669, 5156, 5197 |
| Bme1390I | CCNGG | 9 cut(s) | 62, 2354, 2624, 2757, 3153, 4136, 4383, 4667, 5360 |
| Bme18I | GGWCC | 4 cut(s) | 1505, 2404, 3481, 3909 |
| BmeT110I | CYCGRG | 1 cut(s) | 4440 |
| BmiI | GGNNCC | 8 cut(s) | 411, 1933, 2771, 2925, 3483, 3743, 3911, 4557 |
| BmrFI | CCNGG | 9 cut(s) | 62, 2354, 2624, 2757, 3153, 4136, 4383, 4667, 5360 |
| BmrI | ACTGGG | 3 cut(s) | 236, 1829, 3891 |
| BmtI | GCTAGC | 1 cut(s) | 272 |
| BmuI | ACTGGG | 3 cut(s) | 236, 1829, 3891 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1377, 5141 |
| BpiI | GAAGAC | 3 cut(s) | 3485, 5243, 5298 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 4423, 4455 |
| BpmI | CTGGAG | 6 cut(s) | 1784, 2856, 3434, 3800, 4574, 4688 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2997, 5391 |
| Bpu14I | TTCGAA | 1 cut(s) | 1000 |
| BpuEI | CTTGAG | 8 cut(s) | 375, 591, 666, 1386, 3079, 3352, 3384, 3692 |
| BpuMI | CCSGG | 2 cut(s) | 2624, 4136 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3699 |
| BsaHI | GRCGYC | 1 cut(s) | 1744 |
| BsaJI | CCNNGG | 9 cut(s) | 259, 641, 1164, 2352, 3151, 3152, 3633, 4665, 5096 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 86, 116, 315, 345, 492, 522, 5092, 5122 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 212, 535, 782, 1148, 2156, 5133 |
| Bse21I | CCTNAGG | 1 cut(s) | 1617 |
| Bse3DI | GCAATG | 7 cut(s) | 53, 1039, 1045, 2476, 3466, 3666, 3711 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3699 |
| BseBI | CCWGG | 7 cut(s) | 62, 2354, 2757, 3153, 4383, 4667, 5360 |
| BseDI | CCNNGG | 9 cut(s) | 259, 641, 1164, 2352, 3151, 3152, 3633, 4665, 5096 |
| BseJI | GATNNNNATC | 1 cut(s) | 3699 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 212, 535, 782, 1148, 2156, 5133 |
| BseMI | GCAATG | 7 cut(s) | 53, 1039, 1045, 2476, 3466, 3666, 3711 |
| BseRI | GAGGAG | 7 cut(s) | 91, 101, 518, 594, 2447, 2450, 4826 |
| BseSI | GKGCMC | 1 cut(s) | 1935 |
| BseYI | CCCAGC | 6 cut(s) | 542, 833, 1529, 1934, 3179, 3979 |
| BsgI | GTGCAG | 1 cut(s) | 2706 |
| Bsh1236I | CGCG | 2 cut(s) | 146, 193 |
| BshFI | GGCC | 9 cut(s) | 65, 77, 528, 1933, 2115, 2755, 4466, 4536, 4664 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1966, 2829, 3619, 4130 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4440 |
| BsiSI | CCGG | 3 cut(s) | 120, 2624, 4136 |
| BslFI | GGGAC | 4 cut(s) | 700, 3134, 4369, 5149 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 212, 535, 782, 1148, 2156, 5133 |
| BsmBI | CGTCTC | 2 cut(s) | 429, 897 |
| BsmFI | GGGAC | 4 cut(s) | 700, 3134, 4369, 5149 |
| BsmI | GAATGC | 2 cut(s) | 448, 2543 |
| BsnI | GGCC | 9 cut(s) | 65, 77, 528, 1933, 2115, 2755, 4466, 4536, 4664 |
| BsoBI | CYCGRG | 1 cut(s) | 4440 |
| Bsp119I | TTCGAA | 1 cut(s) | 1000 |
| Bsp120I | GGGCCC | 1 cut(s) | 1931 |
| Bsp1286I | GDGCHC | 6 cut(s) | 991, 1935, 1966, 2829, 3619, 4130 |
| BspACI | CCGC | 8 cut(s) | 193, 344, 459, 1454, 1638, 2541, 3612, 4244 |
| BspANI | GGCC | 9 cut(s) | 65, 77, 528, 1933, 2115, 2755, 4466, 4536, 4664 |
| BspFNI | CGCG | 2 cut(s) | 146, 193 |
| BspHI | TCATGA | 2 cut(s) | 1750, 3034 |
| BspLI | GGNNCC | 8 cut(s) | 411, 1933, 2771, 2925, 3483, 3743, 3911, 4557 |
| BspMAI | CTGCAG | 3 cut(s) | 2947, 4630, 4794 |
| BspOI | GCTAGC | 1 cut(s) | 272 |
| BspT104I | TTCGAA | 1 cut(s) | 1000 |
| BspTI | CTTAAG | 1 cut(s) | 1411 |
| BsrDI | GCAATG | 7 cut(s) | 53, 1039, 1045, 2476, 3466, 3666, 3711 |
| BssECI | CCNNGG | 9 cut(s) | 259, 641, 1164, 2352, 3151, 3152, 3633, 4665, 5096 |
| BssNAI | GTATAC | 1 cut(s) | 5315 |
| BssNI | GRCGYC | 1 cut(s) | 1744 |
| BssT1I | CCWWGG | 4 cut(s) | 641, 1164, 3633, 5096 |
| Bst1107I | GTATAC | 1 cut(s) | 5315 |
| Bst2UI | CCWGG | 7 cut(s) | 62, 2354, 2757, 3153, 4383, 4667, 5360 |
| BstACI | GRCGYC | 1 cut(s) | 1744 |
| BstAFI | CTTAAG | 1 cut(s) | 1411 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 222, 5355 |
| BstBI | TTCGAA | 1 cut(s) | 1000 |
| BstDSI | CCRYGG | 1 cut(s) | 259 |
| BstEII | GGTNACC | 1 cut(s) | 4239 |
| BstFNI | CGCG | 2 cut(s) | 146, 193 |
| BstHHI | GCGC | 1 cut(s) | 4917 |
| BstNI | CCWGG | 7 cut(s) | 62, 2354, 2757, 3153, 4383, 4667, 5360 |
| BstNSI | RCATGY | 6 cut(s) | 1973, 2080, 2294, 3149, 3626, 3899 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1377, 5141 |
| BstPI | GGTNACC | 1 cut(s) | 4239 |
| BstSCI | CCNGG | 9 cut(s) | 60, 2352, 2622, 2755, 3151, 4134, 4381, 4665, 5358 |
| BstSFI | CTRYAG | 7 cut(s) | 249, 1128, 2943, 3863, 4626, 4790, 5199 |
| BstSLI | GKGCMC | 1 cut(s) | 1935 |
| BstUI | CGCG | 2 cut(s) | 146, 193 |
| BstV2I | GAAGAC | 3 cut(s) | 3485, 5243, 5298 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2398 |
| BstZ17I | GTATAC | 1 cut(s) | 5315 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1617 |
| BsuI | GTATCC | 1 cut(s) | 2241 |
| BsuRI | GGCC | 9 cut(s) | 65, 77, 528, 1933, 2115, 2755, 4466, 4536, 4664 |
| BtgI | CCRYGG | 1 cut(s) | 259 |
| BtsI | GCAGTG | 7 cut(s) | 26, 353, 1816, 1966, 2325, 2608, 2694 |
| CaiI | CAGNNNCTG | 3 cut(s) | 163, 1339, 5138 |
| CciI | TCATGA | 2 cut(s) | 1750, 3034 |
| CfoI | GCGC | 1 cut(s) | 4917 |
| CseI | GACGC | 4 cut(s) | 702, 3665, 4679, 5010 |
| Csp6I | GTAC | 8 cut(s) | 786, 888, 1008, 3668, 4489, 5155, 5196, 5387 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1255, 1290 |
| CviQI | GTAC | 8 cut(s) | 786, 888, 1008, 3668, 4489, 5155, 5196, 5387 |
| DraI | TTTAAA | 1 cut(s) | 1239 |
| EaeI | YGGCCR | 1 cut(s) | 2113 |
| EciI | GGCGGA | 1 cut(s) | 1653 |
| Ecl136II | GAGCTC | 2 cut(s) | 2827, 4128 |
| Eco130I | CCWWGG | 4 cut(s) | 641, 1164, 3633, 5096 |
| Eco147I | AGGCCT | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 4 cut(s) | 991, 1935, 2829, 4130 |
| Eco32I | GATATC | 2 cut(s) | 1080, 5263 |
| Eco47I | GGWCC | 4 cut(s) | 1505, 2404, 3481, 3909 |
| Eco53kI | GAGCTC | 2 cut(s) | 2827, 4128 |
| Eco81I | CCTNAGG | 1 cut(s) | 1617 |
| Eco88I | CYCGRG | 1 cut(s) | 4440 |
| Eco91I | GGTNACC | 1 cut(s) | 4239 |
| EcoICRI | GAGCTC | 2 cut(s) | 2827, 4128 |
| EcoO109I | RGGNCCY | 6 cut(s) | 1505, 1931, 3481, 3909, 4535, 4663 |
| EcoO65I | GGTNACC | 1 cut(s) | 4239 |
| EcoRI | GAATTC | 2 cut(s) | 586, 4340 |
| EcoRII | CCWGG | 7 cut(s) | 60, 2352, 2755, 3151, 4381, 4665, 5358 |
| EcoRV | GATATC | 2 cut(s) | 1080, 5263 |
| EcoT14I | CCWWGG | 4 cut(s) | 641, 1164, 3633, 5096 |
| EcoT22I | ATGCAT | 2 cut(s) | 2292, 2863 |
| EcoT38I | GRGCYC | 4 cut(s) | 991, 1935, 2829, 4130 |
| ErhI | CCWWGG | 4 cut(s) | 641, 1164, 3633, 5096 |
| Esp3I | CGTCTC | 2 cut(s) | 429, 897 |
| FaqI | GGGAC | 4 cut(s) | 700, 3134, 4369, 5149 |
| FauI | CCCGC | 1 cut(s) | 2534 |
| FauNDI | CATATG | 1 cut(s) | 3237 |
| FbaI | TGATCA | 3 cut(s) | 1725, 2578, 3375 |
| FblI | GTMKAC | 4 cut(s) | 2849, 3044, 5202, 5314 |
| FriOI | GRGCYC | 4 cut(s) | 991, 1935, 2829, 4130 |
| GlaI | GCGC | 1 cut(s) | 4916 |
| GsaI | CCCAGC | 6 cut(s) | 546, 837, 1533, 1938, 3183, 3983 |
| GsuI | CTGGAG | 6 cut(s) | 1784, 2856, 3434, 3800, 4574, 4688 |
| HaeIII | GGCC | 9 cut(s) | 65, 77, 528, 1933, 2115, 2755, 4466, 4536, 4664 |
| HapII | CCGG | 3 cut(s) | 120, 2624, 4136 |
| HgaI | GACGC | 4 cut(s) | 702, 3665, 4679, 5010 |
| HhaI | GCGC | 1 cut(s) | 4917 |
| Hin1I | GRCGYC | 1 cut(s) | 1744 |
| Hin6I | GCGC | 1 cut(s) | 4915 |
| HinP1I | GCGC | 1 cut(s) | 4915 |
| HincII | GTYRAC | 2 cut(s) | 2797, 2850 |
| HindII | GTYRAC | 2 cut(s) | 2797, 2850 |
| HindIII | AAGCTT | 1 cut(s) | 5419 |
| HpaII | CCGG | 3 cut(s) | 120, 2624, 4136 |
| HphI | GGTGA | 8 cut(s) | 248, 1605, 2041, 2340, 2909, 2985, 4233, 4570 |
| Hpy99I | CGWCG | 1 cut(s) | 2432 |
| HpyCH4IV | ACGT | 7 cut(s) | 422, 750, 890, 1448, 1744, 3766, 4717 |
| HpySE526I | ACGT | 7 cut(s) | 422, 750, 890, 1448, 1744, 3766, 4717 |
| Hsp92I | GRCGYC | 1 cut(s) | 1744 |
| HspAI | GCGC | 1 cut(s) | 4915 |
| Ksp22I | TGATCA | 3 cut(s) | 1725, 2578, 3375 |
| MaeII | ACGT | 7 cut(s) | 422, 750, 890, 1448, 1744, 3766, 4717 |
| MfeI | CAATTG | 2 cut(s) | 1539, 2374 |
| MhlI | GDGCHC | 6 cut(s) | 991, 1935, 1966, 2829, 3619, 4130 |
| MlsI | TGGCCA | 1 cut(s) | 2115 |
| MluNI | TGGCCA | 1 cut(s) | 2115 |
| MlyI | GAGTC | 7 cut(s) | 459, 501, 750, 755, 1561, 3211, 4351 |
| MmeI | TCCRAC | 7 cut(s) | 377, 1811, 3155, 3461, 3902, 3941, 4764 |
| Mox20I | TGGCCA | 1 cut(s) | 2115 |
| Mph1103I | ATGCAT | 2 cut(s) | 2292, 2863 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2968, 4093 |
| MscI | TGGCCA | 1 cut(s) | 2115 |
| MslI | CAYNNNNRTG | 7 cut(s) | 825, 909, 2022, 3225, 4365, 4655, 4986 |
| Msp20I | TGGCCA | 1 cut(s) | 2115 |
| MspA1I | CMGCKG | 2 cut(s) | 1315, 4625 |
| MspCI | CTTAAG | 1 cut(s) | 1411 |
| MspI | CCGG | 3 cut(s) | 120, 2624, 4136 |
| MspR9I | CCNGG | 9 cut(s) | 62, 2354, 2624, 2757, 3153, 4136, 4383, 4667, 5360 |
| MunI | CAATTG | 2 cut(s) | 1539, 2374 |
| Mva1269I | GAATGC | 2 cut(s) | 448, 2543 |
| MvaI | CCWGG | 7 cut(s) | 62, 2354, 2757, 3153, 4383, 4667, 5360 |
| MvnI | CGCG | 2 cut(s) | 146, 193 |
| NciI | CCSGG | 2 cut(s) | 2624, 4136 |
| NdeI | CATATG | 1 cut(s) | 3237 |
| NheI | GCTAGC | 1 cut(s) | 268 |
| NlaIV | GGNNCC | 8 cut(s) | 411, 1933, 2771, 2925, 3483, 3743, 3911, 4557 |
| NmuCI | GTSAC | 5 cut(s) | 818, 1335, 4239, 4576, 4944 |
| NsiI | ATGCAT | 2 cut(s) | 2292, 2863 |
| NspI | RCATGY | 6 cut(s) | 1973, 2080, 2294, 3149, 3626, 3899 |
| NspV | TTCGAA | 1 cut(s) | 1000 |
| OliI | CACNNNNGTG | 1 cut(s) | 825 |
| PaeI | GCATGC | 1 cut(s) | 2294 |
| PaeR7I | CTCGAG | 1 cut(s) | 4440 |
| PagI | TCATGA | 2 cut(s) | 1750, 3034 |
| PasI | CCCWGGG | 1 cut(s) | 3152 |
| PceI | AGGCCT | 1 cut(s) | 77 |
| PciI | ACATGT | 4 cut(s) | 1969, 2076, 3145, 3622 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 193 |
| PctI | GAATGC | 2 cut(s) | 448, 2543 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2968, 4093 |
| PfoI | TCCNGGA | 1 cut(s) | 4134 |
| PleI | GAGTC | 7 cut(s) | 458, 500, 749, 755, 1560, 3210, 4351 |
| PpsI | GAGTC | 7 cut(s) | 458, 500, 749, 755, 1560, 3210, 4351 |
| PpuMI | RGGWCCY | 3 cut(s) | 1505, 3481, 3909 |
| PscI | ACATGT | 4 cut(s) | 1969, 2076, 3145, 3622 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1377, 5141 |
| PshBI | ATTAAT | 1 cut(s) | 3921 |
| PsiI | TTATAA | 2 cut(s) | 3686, 3840 |
| Psp124BI | GAGCTC | 2 cut(s) | 2829, 4130 |
| Psp5II | RGGWCCY | 3 cut(s) | 1505, 3481, 3909 |
| Psp6I | CCWGG | 7 cut(s) | 60, 2352, 2755, 3151, 4381, 4665, 5358 |
| PspEI | GGTNACC | 1 cut(s) | 4239 |
| PspFI | CCCAGC | 6 cut(s) | 542, 833, 1529, 1934, 3179, 3979 |
| PspGI | CCWGG | 7 cut(s) | 60, 2352, 2755, 3151, 4381, 4665, 5358 |
| PspN4I | GGNNCC | 8 cut(s) | 411, 1933, 2771, 2925, 3483, 3743, 3911, 4557 |
| PspOMI | GGGCCC | 1 cut(s) | 1931 |
| PspPPI | RGGWCCY | 3 cut(s) | 1505, 3481, 3909 |
| PstI | CTGCAG | 3 cut(s) | 2947, 4630, 4794 |
| PstNI | CAGNNNCTG | 3 cut(s) | 163, 1339, 5138 |
| PvuII | CAGCTG | 2 cut(s) | 1315, 4625 |
| RsaI | GTAC | 8 cut(s) | 787, 889, 1009, 3669, 4490, 5156, 5197, 5388 |
| RsaNI | GTAC | 8 cut(s) | 786, 888, 1008, 3668, 4489, 5155, 5196, 5387 |
| RseI | CAYNNNNRTG | 7 cut(s) | 825, 909, 2022, 3225, 4365, 4655, 4986 |
| SacI | GAGCTC | 2 cut(s) | 2829, 4130 |
| SalI | GTCGAC | 1 cut(s) | 2848 |
| ScaI | AGTACT | 3 cut(s) | 3669, 5156, 5197 |
| SchI | GAGTC | 7 cut(s) | 459, 501, 750, 755, 1561, 3211, 4351 |
| ScrFI | CCNGG | 9 cut(s) | 62, 2354, 2624, 2757, 3153, 4136, 4383, 4667, 5360 |
| SduI | GDGCHC | 6 cut(s) | 991, 1935, 1966, 2829, 3619, 4130 |
| SfcI | CTRYAG | 7 cut(s) | 249, 1128, 2943, 3863, 4626, 4790, 5199 |
| Sfr274I | CTCGAG | 1 cut(s) | 4440 |
| SfuI | TTCGAA | 1 cut(s) | 1000 |
| SinI | GGWCC | 4 cut(s) | 1505, 2404, 3481, 3909 |
| SlaI | CTCGAG | 1 cut(s) | 4440 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 825, 909, 2022, 3225, 4365, 4655, 4986 |
| SpeI | ACTAGT | 1 cut(s) | 5240 |
| SphI | GCATGC | 1 cut(s) | 2294 |
| SseBI | AGGCCT | 1 cut(s) | 77 |
| SsiI | CCGC | 8 cut(s) | 193, 344, 459, 1454, 1638, 2541, 3612, 4244 |
| SspI | AATATT | 4 cut(s) | 2188, 2879, 4573, 4585 |
| SstI | GAGCTC | 2 cut(s) | 2829, 4130 |
| StuI | AGGCCT | 1 cut(s) | 77 |
| StyD4I | CCNGG | 9 cut(s) | 60, 2352, 2622, 2755, 3151, 4134, 4381, 4665, 5358 |
| StyI | CCWWGG | 4 cut(s) | 641, 1164, 3633, 5096 |
| TaiI | ACGT | 7 cut(s) | 425, 753, 893, 1451, 1747, 3769, 4720 |
| TatI | WGTACW | 4 cut(s) | 1007, 3667, 5154, 5195 |
| TauI | GCSGC | 3 cut(s) | 196, 346, 461 |
| TseFI | GTSAC | 5 cut(s) | 818, 1335, 4239, 4576, 4944 |
| Tsp45I | GTSAC | 5 cut(s) | 818, 1335, 4239, 4576, 4944 |
| TspGWI | ACGGA | 2 cut(s) | 1245, 3315 |
| Vha464I | CTTAAG | 1 cut(s) | 1411 |
| VpaK11BI | GGWCC | 4 cut(s) | 1505, 2404, 3481, 3909 |
| VspI | ATTAAT | 1 cut(s) | 3921 |
| XapI | RAATTY | 7 cut(s) | 586, 805, 1154, 1940, 4018, 4340, 5327 |
| XbaI | TCTAGA | 3 cut(s) | 1208, 2450, 4321 |
| XceI | RCATGY | 6 cut(s) | 1973, 2080, 2294, 3149, 3626, 3899 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4988 |
| XhoI | CTCGAG | 1 cut(s) | 4440 |
| XmaJI | CCTAGG | 1 cut(s) | 5096 |
| XmiI | GTMKAC | 4 cut(s) | 2849, 3044, 5202, 5314 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2968, 4093 |
| ZraI | GACGTC | 1 cut(s) | 1745 |
| ZrmI | AGTACT | 3 cut(s) | 3669, 5156, 5197 |
| Zsp2I | ATGCAT | 2 cut(s) | 2292, 2863 |