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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 |
| fragaria_vesca | FvH4_7g06090 FvH4_7g06090 |
| malus_domestica | MD00G1168200.v1.1 MD00G1168400.v1.1 MD03G1024600.v1.1 MD03G1025200.v1.1 MD03G1025800.v1.1 MD11G1029700.v1.1 MD11G1030200.v1.1 |
| prunus_persica | Prupe.5G032900_v2.0.a1 Prupe.5G032900_v2.0.a1 Prupe.7G022200_v2.0.a1 |
| pyrus_communis | pycom03g02140 pycom03g02150 pycom11g02320 pycom11g02330 |
| rosa_chinensis | RchiOBHm_Chr1g0333641 |
| rosa_laevigata | RLG00000029543 |
| rosa_multiflora | Rmu_sc0002955.1_g000032 Rmu_sc0004487.1_g000019 Rmu_sc0004487.1_g000020 Rmu_sc0038804.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317360 |
| rosa_rugosa | Rorug01G0110700 Rorug01G0110800 |
| rosa_samantha | Rh1AG133300 Rh1BG102000 Rh1CG127500 Rh1DG139500 |
| rosa_wichuraiana | Rw0G003340 Rw1G011110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3722 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1333 |
| AccBSI | CCGCTC | 2 cut(s) | 199, 2433 |
| AccI | GTMKAC | 4 cut(s) | 5, 2619, 2675, 5341 |
| AciI | CCGC | 5 cut(s) | 197, 1656, 2433, 3686, 4942 |
| AclWI | GGATC | 9 cut(s) | 214, 422, 435, 713, 726, 1608, 4032, 4507, 5114 |
| AcoI | YGGCCR | 2 cut(s) | 1237, 2134 |
| AcsI | RAATTY | 7 cut(s) | 604, 1172, 1961, 2069, 4060, 4382, 5354 |
| AdeI | CACNNNGTG | 2 cut(s) | 215, 217 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 230, 800, 1166, 2177, 2380, 2455, 3581, 4665, 5392 |
| AflIII | ACRYGT | 4 cut(s) | 162, 1617, 1990, 3658 |
| AhlI | ACTAGT | 1 cut(s) | 3680 |
| AjiI | CACGTC | 3 cut(s) | 163, 441, 1620 |
| AjnI | CCWGG | 7 cut(s) | 898, 2373, 2791, 4423, 4663, 4692, 5385 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2989, 3021 |
| AleI | CACNNNNGTG | 1 cut(s) | 843 |
| Alw21I | GWGCWC | 4 cut(s) | 305, 1987, 3655, 4172 |
| Alw26I | GTCTC | 7 cut(s) | 447, 688, 738, 766, 915, 1416, 5108 |
| Alw44I | GTGCAC | 1 cut(s) | 301 |
| AlwI | GGATC | 9 cut(s) | 214, 422, 435, 713, 726, 1608, 4032, 4507, 5114 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 5117 |
| Ama87I | CYCGRG | 2 cut(s) | 408, 3299 |
| ApaI | GGGCCC | 1 cut(s) | 1956 |
| ApaLI | GTGCAC | 1 cut(s) | 301 |
| ApoI | RAATTY | 7 cut(s) | 604, 1172, 1961, 2069, 4060, 4382, 5354 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3910, 3942 |
| AseI | ATTAAT | 1 cut(s) | 3224 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 3105, 4135, 4514, 5186 |
| AspA2I | CCTAGG | 1 cut(s) | 5123 |
| AspLEI | GCGC | 1 cut(s) | 392 |
| AsuC2I | CCSGG | 2 cut(s) | 2645, 4022 |
| AsuHPI | GGTGA | 6 cut(s) | 1088, 1343, 1623, 2033, 3021, 5342 |
| AsuII | TTCGAA | 1 cut(s) | 1018 |
| AvaI | CYCGRG | 2 cut(s) | 408, 3299 |
| AvaII | GGWCC | 5 cut(s) | 1523, 2425, 3517, 3621, 3948 |
| AvrII | CCTAGG | 1 cut(s) | 5123 |
| AxyI | CCTNAGG | 1 cut(s) | 1635 |
| BaeGI | GKGCMC | 4 cut(s) | 305, 371, 1956, 2279 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3447, 3480 |
| BalI | TGGCCA | 2 cut(s) | 1239, 2136 |
| BamHI | GGATCC | 2 cut(s) | 427, 718 |
| BanII | GRGCYC | 3 cut(s) | 1956, 4172, 4587 |
| BbsI | GAAGAC | 2 cut(s) | 2721, 4902 |
| Bbv12I | GWGCWC | 4 cut(s) | 305, 1987, 3655, 4172 |
| BbvCI | CCTCAGC | 1 cut(s) | 2864 |
| BciT130I | CCWGG | 7 cut(s) | 900, 2375, 2793, 4425, 4665, 4694, 5387 |
| BciVI | GTATCC | 2 cut(s) | 665, 3448 |
| BclI | TGATCA | 3 cut(s) | 1746, 2599, 3411 |
| BcnI | CCSGG | 2 cut(s) | 2645, 4022 |
| BcoDI | GTCTC | 7 cut(s) | 447, 688, 738, 766, 915, 1416, 5108 |
| BcuI | ACTAGT | 1 cut(s) | 3680 |
| BfmI | CTRYAG | 6 cut(s) | 267, 1564, 3855, 4338, 4653, 4817 |
| BfuI | GTATCC | 2 cut(s) | 665, 3448 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4697 |
| BglII | AGATCT | 6 cut(s) | 30, 986, 1223, 2120, 3605, 3940 |
| BlnI | CCTAGG | 1 cut(s) | 5123 |
| Bme1390I | CCNGG | 9 cut(s) | 900, 2375, 2645, 2793, 4022, 4425, 4665, 4694, 5387 |
| Bme18I | GGWCC | 5 cut(s) | 1523, 2425, 3517, 3621, 3948 |
| BmeT110I | CYCGRG | 2 cut(s) | 408, 3299 |
| BmgBI | CACGTC | 3 cut(s) | 163, 441, 1620 |
| BmiI | GGNNCC | 7 cut(s) | 429, 720, 1954, 3519, 3622, 3782, 4584 |
| BmrFI | CCNGG | 9 cut(s) | 900, 2375, 2645, 2793, 4022, 4425, 4665, 4694, 5387 |
| BmrI | ACTGGG | 2 cut(s) | 1850, 2632 |
| BmuI | ACTGGG | 2 cut(s) | 1850, 2632 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1395, 1683 |
| BpiI | GAAGAC | 2 cut(s) | 2721, 4902 |
| BpmI | CTGGAG | 6 cut(s) | 1805, 2892, 3636, 3839, 3942, 4715 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2864 |
| Bpu14I | TTCGAA | 1 cut(s) | 1018 |
| BpuEI | CTTGAG | 7 cut(s) | 684, 1414, 1755, 3115, 3388, 3470, 3728 |
| BpuMI | CCSGG | 2 cut(s) | 2645, 4022 |
| BsaAI | YACGTR | 2 cut(s) | 653, 4976 |
| BsaJI | CCNNGG | 7 cut(s) | 2373, 3187, 3300, 3669, 4664, 4692, 5123 |
| BsaWI | WCCGGW | 1 cut(s) | 4496 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 230, 800, 1166, 2177, 2380, 2455, 3581, 4665, 5392 |
| Bse118I | RCCGGY | 2 cut(s) | 793, 3809 |
| Bse21I | CCTNAGG | 1 cut(s) | 1635 |
| Bse3DI | GCAATG | 6 cut(s) | 53, 114, 352, 1063, 3702, 3747 |
| BseBI | CCWGG | 7 cut(s) | 900, 2375, 2793, 4425, 4665, 4694, 5387 |
| BseDI | CCNNGG | 7 cut(s) | 2373, 3187, 3300, 3669, 4664, 4692, 5123 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 230, 800, 1166, 2177, 2380, 2455, 3581, 4665, 5392 |
| BseMI | GCAATG | 6 cut(s) | 53, 114, 352, 1063, 3702, 3747 |
| BseMII | CTCAG | 8 cut(s) | 777, 795, 1626, 2855, 2894, 3218, 3935, 4793 |
| BseRI | GAGGAG | 6 cut(s) | 123, 139, 536, 2471, 2881, 4853 |
| BseSI | GKGCMC | 4 cut(s) | 305, 371, 1956, 2279 |
| BseYI | CCCAGC | 6 cut(s) | 560, 851, 958, 1417, 1547, 1955 |
| BsgI | GTGCAG | 3 cut(s) | 534, 2742, 4998 |
| BsiHKAI | GWGCWC | 4 cut(s) | 305, 1987, 3655, 4172 |
| BsiHKCI | CYCGRG | 2 cut(s) | 408, 3299 |
| BsiSI | CCGG | 6 cut(s) | 120, 794, 2645, 3810, 4022, 4497 |
| BslFI | GGGAC | 3 cut(s) | 3634, 4411, 4688 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 230, 800, 1166, 2177, 2380, 2455, 3581, 4665, 5392 |
| BsmAI | GTCTC | 7 cut(s) | 447, 688, 738, 766, 915, 1416, 5108 |
| BsmBI | CGTCTC | 3 cut(s) | 447, 738, 915 |
| BsmFI | GGGAC | 3 cut(s) | 3634, 4411, 4688 |
| BsmI | GAATGC | 4 cut(s) | 643, 2003, 2975, 3843 |
| BsoBI | CYCGRG | 2 cut(s) | 408, 3299 |
| Bsp119I | TTCGAA | 1 cut(s) | 1018 |
| Bsp120I | GGGCCC | 1 cut(s) | 1952 |
| Bsp1286I | GDGCHC | 8 cut(s) | 305, 371, 1956, 1987, 2279, 3655, 4172, 4587 |
| Bsp1407I | TGTACA | 1 cut(s) | 2917 |
| BspACI | CCGC | 5 cut(s) | 197, 1656, 2433, 3686, 4942 |
| BspCNI | CTCAG | 9 cut(s) | 4, 776, 794, 1627, 2856, 2893, 3217, 3936, 4794 |
| BspHI | TCATGA | 2 cut(s) | 175, 3070 |
| BspLI | GGNNCC | 7 cut(s) | 429, 720, 1954, 3519, 3622, 3782, 4584 |
| BspMAI | CTGCAG | 3 cut(s) | 4342, 4657, 4821 |
| BspPI | GGATC | 9 cut(s) | 214, 422, 435, 713, 726, 1608, 4032, 4507, 5114 |
| BspQI | GCTCTTC | 1 cut(s) | 2470 |
| BspT104I | TTCGAA | 1 cut(s) | 1018 |
| BsrBI | CCGCTC | 2 cut(s) | 199, 2433 |
| BsrDI | GCAATG | 6 cut(s) | 53, 114, 352, 1063, 3702, 3747 |
| BsrFI | RCCGGY | 2 cut(s) | 793, 3809 |
| BsrGI | TGTACA | 1 cut(s) | 2917 |
| BssAI | RCCGGY | 2 cut(s) | 793, 3809 |
| BssECI | CCNNGG | 7 cut(s) | 2373, 3187, 3300, 3669, 4664, 4692, 5123 |
| BssNAI | GTATAC | 1 cut(s) | 5342 |
| BssT1I | CCWWGG | 3 cut(s) | 3187, 3669, 5123 |
| Bst1107I | GTATAC | 1 cut(s) | 5342 |
| Bst2UI | CCWGG | 7 cut(s) | 900, 2375, 2793, 4425, 4665, 4694, 5387 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 25, 5150, 5382 |
| BstAUI | TGTACA | 1 cut(s) | 2917 |
| BstBAI | YACGTR | 2 cut(s) | 653, 4976 |
| BstBI | TTCGAA | 1 cut(s) | 1018 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2453 |
| BstHHI | GCGC | 1 cut(s) | 392 |
| BstMAI | GTCTC | 7 cut(s) | 447, 688, 738, 766, 915, 1416, 5108 |
| BstNI | CCWGG | 7 cut(s) | 900, 2375, 2793, 4425, 4665, 4694, 5387 |
| BstNSI | RCATGY | 3 cut(s) | 1994, 3662, 3938 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1395, 1683 |
| BstSCI | CCNGG | 9 cut(s) | 898, 2373, 2643, 2791, 4020, 4423, 4663, 4692, 5385 |
| BstSFI | CTRYAG | 6 cut(s) | 267, 1564, 3855, 4338, 4653, 4817 |
| BstSLI | GKGCMC | 4 cut(s) | 305, 371, 1956, 2279 |
| BstSNI | TACGTA | 1 cut(s) | 653 |
| BstV2I | GAAGAC | 2 cut(s) | 2721, 4902 |
| BstX2I | RGATCY | 9 cut(s) | 30, 427, 718, 986, 1223, 2120, 3605, 3940, 4037 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2419 |
| BstYI | RGATCY | 9 cut(s) | 30, 427, 718, 986, 1223, 2120, 3605, 3940, 4037 |
| BstZ17I | GTATAC | 1 cut(s) | 5342 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1635 |
| BsuI | GTATCC | 2 cut(s) | 665, 3448 |
| BtrI | CACGTC | 3 cut(s) | 163, 441, 1620 |
| BtsI | GCAGTG | 2 cut(s) | 2730, 3792 |
| CaiI | CAGNNNCTG | 1 cut(s) | 5117 |
| CciI | TCATGA | 2 cut(s) | 175, 3070 |
| CfoI | GCGC | 1 cut(s) | 392 |
| Cfr10I | RCCGGY | 2 cut(s) | 793, 3809 |
| CseI | GACGC | 4 cut(s) | 485, 2469, 3701, 4706 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1344, 1379 |
| DraI | TTTAAA | 2 cut(s) | 2154, 2235 |
| DraIII | CACNNNGTG | 2 cut(s) | 215, 217 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1333 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1333 |
| EaeI | YGGCCR | 2 cut(s) | 1237, 2134 |
| EciI | GGCGGA | 2 cut(s) | 1671, 4957 |
| Ecl136II | GAGCTC | 1 cut(s) | 4170 |
| Eco105I | TACGTA | 1 cut(s) | 653 |
| Eco130I | CCWWGG | 3 cut(s) | 3187, 3669, 5123 |
| Eco147I | AGGCCT | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 3 cut(s) | 1956, 4172, 4587 |
| Eco32I | GATATC | 2 cut(s) | 1098, 5290 |
| Eco47I | GGWCC | 5 cut(s) | 1523, 2425, 3517, 3621, 3948 |
| Eco53kI | GAGCTC | 1 cut(s) | 4170 |
| Eco81I | CCTNAGG | 1 cut(s) | 1635 |
| Eco88I | CYCGRG | 2 cut(s) | 408, 3299 |
| EcoICRI | GAGCTC | 1 cut(s) | 4170 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2453 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1523, 1952, 3517, 4562, 4690 |
| EcoRI | GAATTC | 2 cut(s) | 604, 4382 |
| EcoRII | CCWGG | 7 cut(s) | 898, 2373, 2791, 4423, 4663, 4692, 5385 |
| EcoRV | GATATC | 2 cut(s) | 1098, 5290 |
| EcoT14I | CCWWGG | 3 cut(s) | 3187, 3669, 5123 |
| EcoT38I | GRGCYC | 3 cut(s) | 1956, 4172, 4587 |
| ErhI | CCWWGG | 3 cut(s) | 3187, 3669, 5123 |
| Esp3I | CGTCTC | 3 cut(s) | 447, 738, 915 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3093, 3125 |
| FaqI | GGGAC | 3 cut(s) | 3634, 4411, 4688 |
| FbaI | TGATCA | 3 cut(s) | 1746, 2599, 3411 |
| FblI | GTMKAC | 4 cut(s) | 5, 2619, 2675, 5341 |
| FriOI | GRGCYC | 3 cut(s) | 1956, 4172, 4587 |
| GlaI | GCGC | 1 cut(s) | 391 |
| GsaI | CCCAGC | 6 cut(s) | 564, 855, 962, 1421, 1551, 1959 |
| GsuI | CTGGAG | 6 cut(s) | 1805, 2892, 3636, 3839, 3942, 4715 |
| HapII | CCGG | 6 cut(s) | 120, 794, 2645, 3810, 4022, 4497 |
| HgaI | GACGC | 4 cut(s) | 485, 2469, 3701, 4706 |
| HhaI | GCGC | 1 cut(s) | 392 |
| Hin6I | GCGC | 1 cut(s) | 390 |
| HinP1I | GCGC | 1 cut(s) | 390 |
| HincII | GTYRAC | 2 cut(s) | 6, 2886 |
| HindII | GTYRAC | 2 cut(s) | 6, 2886 |
| HindIII | AAGCTT | 2 cut(s) | 1036, 5446 |
| HpaII | CCGG | 6 cut(s) | 120, 794, 2645, 3810, 4022, 4497 |
| HphI | GGTGA | 6 cut(s) | 1088, 1343, 1623, 2033, 3021, 5342 |
| Hpy99I | CGWCG | 3 cut(s) | 10, 164, 5327 |
| HpyCH4IV | ACGT | 9 cut(s) | 162, 440, 652, 731, 768, 908, 1619, 4744, 4975 |
| HpySE526I | ACGT | 9 cut(s) | 162, 440, 652, 731, 768, 908, 1619, 4744, 4975 |
| HspAI | GCGC | 1 cut(s) | 390 |
| Ksp22I | TGATCA | 3 cut(s) | 1746, 2599, 3411 |
| LguI | GCTCTTC | 1 cut(s) | 2470 |
| MaeII | ACGT | 9 cut(s) | 162, 440, 652, 731, 768, 908, 1619, 4744, 4975 |
| MbiI | CCGCTC | 2 cut(s) | 199, 2433 |
| MfeI | CAATTG | 2 cut(s) | 1557, 2395 |
| MflI | RGATCY | 9 cut(s) | 30, 427, 718, 986, 1223, 2120, 3605, 3940, 4037 |
| MhlI | GDGCHC | 8 cut(s) | 305, 371, 1956, 1987, 2279, 3655, 4172, 4587 |
| MlsI | TGGCCA | 2 cut(s) | 1239, 2136 |
| MluNI | TGGCCA | 2 cut(s) | 1239, 2136 |
| MlyI | GAGTC | 8 cut(s) | 768, 773, 1579, 2234, 3247, 4393, 5036, 5278 |
| MmeI | TCCRAC | 5 cut(s) | 921, 1832, 3497, 3941, 4791 |
| Mox20I | TGGCCA | 2 cut(s) | 1239, 2136 |
| MroXI | GAANNNNTTC | 4 cut(s) | 3105, 4135, 4514, 5186 |
| MscI | TGGCCA | 2 cut(s) | 1239, 2136 |
| MslI | CAYNNNNRTG | 5 cut(s) | 843, 1593, 2490, 3261, 4682 |
| Msp20I | TGGCCA | 2 cut(s) | 1239, 2136 |
| MspA1I | CMGCKG | 2 cut(s) | 4652, 5168 |
| MspI | CCGG | 6 cut(s) | 120, 794, 2645, 3810, 4022, 4497 |
| MspR9I | CCNGG | 9 cut(s) | 900, 2375, 2645, 2793, 4022, 4425, 4665, 4694, 5387 |
| MunI | CAATTG | 2 cut(s) | 1557, 2395 |
| Mva1269I | GAATGC | 4 cut(s) | 643, 2003, 2975, 3843 |
| MvaI | CCWGG | 7 cut(s) | 900, 2375, 2793, 4425, 4665, 4694, 5387 |
| NciI | CCSGG | 2 cut(s) | 2645, 4022 |
| NlaIV | GGNNCC | 7 cut(s) | 429, 720, 1954, 3519, 3622, 3782, 4584 |
| NmuCI | GTSAC | 3 cut(s) | 436, 2481, 5330 |
| NspI | RCATGY | 3 cut(s) | 1994, 3662, 3938 |
| NspV | TTCGAA | 1 cut(s) | 1018 |
| OliI | CACNNNNGTG | 1 cut(s) | 843 |
| PaeR7I | CTCGAG | 1 cut(s) | 408 |
| PagI | TCATGA | 2 cut(s) | 175, 3070 |
| PceI | AGGCCT | 1 cut(s) | 77 |
| PciI | ACATGT | 2 cut(s) | 1990, 3658 |
| PciSI | GCTCTTC | 1 cut(s) | 2470 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 5331 |
| PctI | GAATGC | 4 cut(s) | 643, 2003, 2975, 3843 |
| PdmI | GAANNNNTTC | 4 cut(s) | 3105, 4135, 4514, 5186 |
| PleI | GAGTC | 8 cut(s) | 767, 773, 1578, 2233, 3246, 4393, 5036, 5277 |
| PpsI | GAGTC | 8 cut(s) | 767, 773, 1578, 2233, 3246, 4393, 5036, 5277 |
| Ppu21I | YACGTR | 2 cut(s) | 653, 4976 |
| PpuMI | RGGWCCY | 2 cut(s) | 1523, 3517 |
| PscI | ACATGT | 2 cut(s) | 1990, 3658 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1395, 1683 |
| PshBI | ATTAAT | 1 cut(s) | 3224 |
| PsiI | TTATAA | 1 cut(s) | 3722 |
| Psp124BI | GAGCTC | 1 cut(s) | 4172 |
| Psp5II | RGGWCCY | 2 cut(s) | 1523, 3517 |
| Psp6I | CCWGG | 7 cut(s) | 898, 2373, 2791, 4423, 4663, 4692, 5385 |
| PspFI | CCCAGC | 6 cut(s) | 560, 851, 958, 1417, 1547, 1955 |
| PspGI | CCWGG | 7 cut(s) | 898, 2373, 2791, 4423, 4663, 4692, 5385 |
| PspN4I | GGNNCC | 7 cut(s) | 429, 720, 1954, 3519, 3622, 3782, 4584 |
| PspOMI | GGGCCC | 1 cut(s) | 1952 |
| PspPPI | RGGWCCY | 2 cut(s) | 1523, 3517 |
| PsrI | GAACNNNNNNTAC | 1 cut(s) | 5451 |
| PstI | CTGCAG | 3 cut(s) | 4342, 4657, 4821 |
| PstNI | CAGNNNCTG | 1 cut(s) | 5117 |
| PsuI | RGATCY | 9 cut(s) | 30, 427, 718, 986, 1223, 2120, 3605, 3940, 4037 |
| PvuII | CAGCTG | 2 cut(s) | 4652, 5168 |
| RseI | CAYNNNNRTG | 5 cut(s) | 843, 1593, 2490, 3261, 4682 |
| SacI | GAGCTC | 1 cut(s) | 4172 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SapI | GCTCTTC | 1 cut(s) | 2470 |
| SchI | GAGTC | 8 cut(s) | 768, 773, 1579, 2234, 3247, 4393, 5036, 5278 |
| ScrFI | CCNGG | 9 cut(s) | 900, 2375, 2645, 2793, 4022, 4425, 4665, 4694, 5387 |
| SduI | GDGCHC | 8 cut(s) | 305, 371, 1956, 1987, 2279, 3655, 4172, 4587 |
| SfcI | CTRYAG | 6 cut(s) | 267, 1564, 3855, 4338, 4653, 4817 |
| Sfr274I | CTCGAG | 1 cut(s) | 408 |
| SfuI | TTCGAA | 1 cut(s) | 1018 |
| SinI | GGWCC | 5 cut(s) | 1523, 2425, 3517, 3621, 3948 |
| SlaI | CTCGAG | 1 cut(s) | 408 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 843, 1593, 2490, 3261, 4682 |
| SmlI | CTYRAG | 8 cut(s) | 408, 699, 1429, 1770, 3094, 3403, 3449, 3707 |
| SmoI | CTYRAG | 8 cut(s) | 408, 699, 1429, 1770, 3094, 3403, 3449, 3707 |
| SnaBI | TACGTA | 1 cut(s) | 653 |
| SpeI | ACTAGT | 1 cut(s) | 3680 |
| SseBI | AGGCCT | 1 cut(s) | 77 |
| SsiI | CCGC | 5 cut(s) | 197, 1656, 2433, 3686, 4942 |
| SspI | AATATT | 2 cut(s) | 4600, 4612 |
| SstI | GAGCTC | 1 cut(s) | 4172 |
| StuI | AGGCCT | 1 cut(s) | 77 |
| StyD4I | CCNGG | 9 cut(s) | 898, 2373, 2643, 2791, 4020, 4423, 4663, 4692, 5385 |
| StyI | CCWWGG | 3 cut(s) | 3187, 3669, 5123 |
| TaiI | ACGT | 9 cut(s) | 165, 443, 655, 734, 771, 911, 1622, 4747, 4978 |
| TatI | WGTACW | 3 cut(s) | 1025, 2917, 3703 |
| TseFI | GTSAC | 3 cut(s) | 436, 2481, 5330 |
| Tsp45I | GTSAC | 3 cut(s) | 436, 2481, 5330 |
| TspGWI | ACGGA | 3 cut(s) | 320, 1686, 2714 |
| VneI | GTGCAC | 1 cut(s) | 301 |
| VpaK11BI | GGWCC | 5 cut(s) | 1523, 2425, 3517, 3621, 3948 |
| VspI | ATTAAT | 1 cut(s) | 3224 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2453 |
| XapI | RAATTY | 7 cut(s) | 604, 1172, 1961, 2069, 4060, 4382, 5354 |
| XbaI | TCTAGA | 5 cut(s) | 1226, 2123, 2471, 3436, 4363 |
| XceI | RCATGY | 3 cut(s) | 1994, 3662, 3938 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 5015 |
| XhoI | CTCGAG | 1 cut(s) | 408 |
| XmaJI | CCTAGG | 1 cut(s) | 5123 |
| XmiI | GTMKAC | 4 cut(s) | 5, 2619, 2675, 5341 |
| XmnI | GAANNNNTTC | 4 cut(s) | 3105, 4135, 4514, 5186 |