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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 |
| fragaria_vesca | FvH4_7g06090 FvH4_7g06090 |
| malus_domestica | MD00G1168200.v1.1 MD00G1168400.v1.1 MD03G1024600.v1.1 MD03G1025200.v1.1 MD03G1025800.v1.1 MD11G1029700.v1.1 MD11G1030200.v1.1 |
| prunus_persica | Prupe.5G032900_v2.0.a1 Prupe.5G032900_v2.0.a1 Prupe.7G022200_v2.0.a1 |
| pyrus_communis | pycom03g02140 pycom03g02150 pycom11g02320 pycom11g02330 |
| rosa_chinensis | RchiOBHm_Chr1g0333641 |
| rosa_laevigata | RLG00000029543 |
| rosa_multiflora | Rmu_sc0002955.1_g000032 Rmu_sc0004487.1_g000019 Rmu_sc0004487.1_g000020 Rmu_sc0038804.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317360 |
| rosa_rugosa | Rorug01G0110700 Rorug01G0110800 |
| rosa_samantha | Rh1AG133300 Rh1BG102000 Rh1CG127500 Rh1DG139500 |
| rosa_wichuraiana | Rw0G003340 Rw1G011110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3548 |
| AarI | CACCTGC | 1 cut(s) | 3461 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1201 |
| AatII | GACGTC | 1 cut(s) | 166 |
| Acc36I | ACCTGC | 1 cut(s) | 3461 |
| AccBSI | CCGCTC | 1 cut(s) | 2292 |
| AccI | GTMKAC | 3 cut(s) | 5, 2445, 2501 |
| AciI | CCGC | 3 cut(s) | 1524, 2292, 3512 |
| AclWI | GGATC | 5 cut(s) | 341, 354, 614, 627, 1476 |
| AcoI | YGGCCR | 2 cut(s) | 1105, 1993 |
| AcsI | RAATTY | 3 cut(s) | 505, 1382, 1928 |
| AcyI | GRCGYC | 1 cut(s) | 163 |
| AfaI | GTAC | 8 cut(s) | 517, 552, 674, 775, 895, 2745, 2851, 3531 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1034, 2036, 2239, 3407 |
| AflIII | ACRYGT | 3 cut(s) | 1485, 1849, 3484 |
| AhlI | ACTAGT | 1 cut(s) | 3506 |
| AjiI | CACGTC | 1 cut(s) | 1488 |
| AjnI | CCWGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2815, 2847 |
| AleI | CACNNNNGTG | 1 cut(s) | 711 |
| Alw21I | GWGCWC | 3 cut(s) | 224, 1846, 3481 |
| Alw26I | GTCTC | 5 cut(s) | 366, 394, 639, 667, 1284 |
| Alw44I | GTGCAC | 1 cut(s) | 220 |
| AlwI | GGATC | 5 cut(s) | 341, 354, 614, 627, 1476 |
| Ama87I | CYCGRG | 1 cut(s) | 3125 |
| AoxI | GGCC | 5 cut(s) | 75, 703, 1105, 1993, 3398 |
| ApaLI | GTGCAC | 1 cut(s) | 220 |
| ApeKI | GCWGC | 7 cut(s) | 70, 211, 1625, 2513, 2672, 3244, 3649 |
| ApoI | RAATTY | 3 cut(s) | 505, 1382, 1928 |
| AseI | ATTAAT | 1 cut(s) | 3050 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2931 |
| AspLEI | GCGC | 2 cut(s) | 311, 1781 |
| AspS9I | GGNCC | 7 cut(s) | 703, 1391, 1820, 2085, 2284, 3343, 3447 |
| AsuHPI | GGTGA | 6 cut(s) | 956, 1211, 1491, 1892, 2847, 3184 |
| AsuII | TTCGAA | 1 cut(s) | 886 |
| AvaI | CYCGRG | 1 cut(s) | 3125 |
| AvaII | GGWCC | 6 cut(s) | 1391, 1820, 2085, 2284, 3343, 3447 |
| AxyI | CCTNAGG | 1 cut(s) | 1503 |
| BaeGI | GKGCMC | 3 cut(s) | 224, 290, 1952 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 3273, 3306 |
| BalI | TGGCCA | 2 cut(s) | 1107, 1995 |
| BamHI | GGATCC | 2 cut(s) | 346, 619 |
| BanII | GRGCYC | 1 cut(s) | 877 |
| BbsI | GAAGAC | 2 cut(s) | 2547, 3347 |
| Bbv12I | GWGCWC | 3 cut(s) | 224, 1846, 3481 |
| BbvCI | CCTCAGC | 1 cut(s) | 2690 |
| BbvI | GCAGC | 7 cut(s) | 82, 223, 1612, 2500, 2659, 3256, 3661 |
| BccI | CCATC | 8 cut(s) | 728, 926, 1116, 1157, 2004, 2210, 2447, 3035 |
| BciT130I | CCWGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| BciVI | GTATCC | 3 cut(s) | 566, 790, 3274 |
| BclI | TGATCA | 2 cut(s) | 1614, 3237 |
| BcoDI | GTCTC | 5 cut(s) | 366, 394, 639, 667, 1284 |
| BcuI | ACTAGT | 1 cut(s) | 3506 |
| BfmI | CTRYAG | 2 cut(s) | 195, 205 |
| BfuAI | ACCTGC | 1 cut(s) | 3461 |
| BfuI | GTATCC | 3 cut(s) | 566, 790, 3274 |
| BglII | AGATCT | 5 cut(s) | 30, 854, 1091, 1979, 3431 |
| BisI | GCNGC | 7 cut(s) | 71, 212, 1626, 2514, 2673, 3245, 3650 |
| BlsI | GCNGC | 7 cut(s) | 72, 213, 1627, 2515, 2674, 3246, 3651 |
| Bme1390I | CCNGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| Bme18I | GGWCC | 6 cut(s) | 1391, 1820, 2085, 2284, 3343, 3447 |
| BmeT110I | CYCGRG | 1 cut(s) | 3125 |
| BmgBI | CACGTC | 1 cut(s) | 1488 |
| BmgT120I | GGNCC | 7 cut(s) | 703, 1391, 1820, 2085, 2284, 3343, 3447 |
| BmiI | GGNNCC | 7 cut(s) | 348, 621, 1822, 2086, 3345, 3448, 3608 |
| BmrFI | CCNGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| BmrI | ACTGGG | 2 cut(s) | 1718, 2458 |
| BmsI | GCATC | 9 cut(s) | 296, 370, 385, 1604, 2118, 2338, 2350, 2629, 3227 |
| BmuI | ACTGGG | 2 cut(s) | 1718, 2458 |
| BoxI | GACNNNNGTC | 2 cut(s) | 1263, 1551 |
| BpiI | GAAGAC | 2 cut(s) | 2547, 3347 |
| BpmI | CTGGAG | 4 cut(s) | 1673, 2718, 3462, 3665 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2690 |
| Bpu14I | TTCGAA | 1 cut(s) | 886 |
| BpuEI | CTTGAG | 7 cut(s) | 312, 585, 1623, 2941, 3214, 3296, 3554 |
| BsaAI | YACGTR | 1 cut(s) | 554 |
| BsaHI | GRCGYC | 1 cut(s) | 163 |
| BsaJI | CCNNGG | 3 cut(s) | 2232, 3126, 3495 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 86, 116, 252, 282, 2519, 2549, 2743, 2773 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1034, 2036, 2239, 3407 |
| Bse118I | RCCGGY | 1 cut(s) | 3635 |
| Bse1I | ACTGG | 8 cut(s) | 26, 188, 843, 1230, 1724, 2019, 2453, 2757 |
| Bse21I | CCTNAGG | 1 cut(s) | 1503 |
| Bse3DI | GCAATG | 6 cut(s) | 53, 114, 271, 931, 3528, 3573 |
| BseBI | CCWGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| BseDI | CCNNGG | 3 cut(s) | 2232, 3126, 3495 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1034, 2036, 2239, 3407 |
| BseMI | GCAATG | 6 cut(s) | 53, 114, 271, 931, 3528, 3573 |
| BseMII | CTCAG | 6 cut(s) | 405, 678, 1494, 2681, 2720, 3044 |
| BseNI | ACTGG | 8 cut(s) | 26, 188, 843, 1230, 1724, 2019, 2453, 2757 |
| BseRI | GAGGAG | 4 cut(s) | 123, 140, 455, 2707 |
| BseSI | GKGCMC | 3 cut(s) | 224, 290, 1952 |
| BseXI | GCAGC | 7 cut(s) | 82, 223, 1612, 2500, 2659, 3256, 3661 |
| BseYI | CCCAGC | 5 cut(s) | 461, 826, 1285, 1415, 1823 |
| BsgI | GTGCAG | 2 cut(s) | 453, 2568 |
| BshFI | GGCC | 5 cut(s) | 77, 705, 1107, 1995, 3400 |
| BsiHKAI | GWGCWC | 3 cut(s) | 224, 1846, 3481 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3125 |
| BsiSI | CCGG | 2 cut(s) | 120, 3636 |
| BslFI | GGGAC | 1 cut(s) | 3460 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1034, 2036, 2239, 3407 |
| BsmAI | GTCTC | 5 cut(s) | 366, 394, 639, 667, 1284 |
| BsmBI | CGTCTC | 2 cut(s) | 366, 639 |
| BsmFI | GGGAC | 1 cut(s) | 3460 |
| BsmI | GAATGC | 3 cut(s) | 544, 2801, 3019 |
| BsnI | GGCC | 5 cut(s) | 77, 705, 1107, 1995, 3400 |
| BsoBI | CYCGRG | 1 cut(s) | 3125 |
| Bsp119I | TTCGAA | 1 cut(s) | 886 |
| Bsp1286I | GDGCHC | 6 cut(s) | 224, 290, 877, 1846, 1952, 3481 |
| Bsp1407I | TGTACA | 1 cut(s) | 2743 |
| BspACI | CCGC | 3 cut(s) | 1524, 2292, 3512 |
| BspANI | GGCC | 5 cut(s) | 77, 705, 1107, 1995, 3400 |
| BspCNI | CTCAG | 7 cut(s) | 4, 404, 677, 1495, 2682, 2719, 3043 |
| BspHI | TCATGA | 2 cut(s) | 2212, 2896 |
| BspLI | GGNNCC | 7 cut(s) | 348, 621, 1822, 2086, 3345, 3448, 3608 |
| BspMAI | CTGCAG | 1 cut(s) | 209 |
| BspMI | ACCTGC | 1 cut(s) | 3461 |
| BspPI | GGATC | 5 cut(s) | 341, 354, 614, 627, 1476 |
| BspQI | GCTCTTC | 1 cut(s) | 1737 |
| BspT104I | TTCGAA | 1 cut(s) | 886 |
| BsrBI | CCGCTC | 1 cut(s) | 2292 |
| BsrDI | GCAATG | 6 cut(s) | 53, 114, 271, 931, 3528, 3573 |
| BsrFI | RCCGGY | 1 cut(s) | 3635 |
| BsrGI | TGTACA | 1 cut(s) | 2743 |
| BsrI | ACTGG | 8 cut(s) | 26, 188, 843, 1230, 1724, 2019, 2453, 2757 |
| BssAI | RCCGGY | 1 cut(s) | 3635 |
| BssECI | CCNNGG | 3 cut(s) | 2232, 3126, 3495 |
| BssNI | GRCGYC | 1 cut(s) | 163 |
| BssT1I | CCWWGG | 1 cut(s) | 3495 |
| Bst2UI | CCWGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| Bst6I | CTCTTC | 9 cut(s) | 89, 336, 495, 609, 1737, 1938, 2163, 2922, 3576 |
| BstACI | GRCGYC | 1 cut(s) | 163 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 25, 3476 |
| BstAUI | TGTACA | 1 cut(s) | 2743 |
| BstBAI | YACGTR | 1 cut(s) | 554 |
| BstBI | TTCGAA | 1 cut(s) | 886 |
| BstDEI | CTNAG | 9 cut(s) | 12, 391, 664, 858, 1404, 1503, 2690, 2706, 3030 |
| BstHHI | GCGC | 2 cut(s) | 311, 1781 |
| BstMAI | GTCTC | 5 cut(s) | 366, 394, 639, 667, 1284 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 25, 125, 431, 467, 2031, 2513, 2915, 3476, 3518 |
| BstNI | CCWGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| BstNSI | RCATGY | 3 cut(s) | 1853, 3488, 3673 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 1263, 1551 |
| BstSCI | CCNGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| BstSFI | CTRYAG | 2 cut(s) | 195, 205 |
| BstSLI | GKGCMC | 3 cut(s) | 224, 290, 1952 |
| BstSNI | TACGTA | 1 cut(s) | 554 |
| BstV1I | GCAGC | 7 cut(s) | 82, 223, 1612, 2500, 2659, 3256, 3661 |
| BstV2I | GAAGAC | 2 cut(s) | 2547, 3347 |
| BstX2I | RGATCY | 7 cut(s) | 30, 346, 619, 854, 1091, 1979, 3431 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2278 |
| BstYI | RGATCY | 7 cut(s) | 30, 346, 619, 854, 1091, 1979, 3431 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1503 |
| BsuI | GTATCC | 3 cut(s) | 566, 790, 3274 |
| BsuRI | GGCC | 5 cut(s) | 77, 705, 1107, 1995, 3400 |
| BtrI | CACGTC | 1 cut(s) | 1488 |
| BtsI | GCAGTG | 3 cut(s) | 202, 2556, 3618 |
| BveI | ACCTGC | 1 cut(s) | 3461 |
| CciI | TCATGA | 2 cut(s) | 2212, 2896 |
| CfoI | GCGC | 2 cut(s) | 311, 1781 |
| Cfr10I | RCCGGY | 1 cut(s) | 3635 |
| Cfr13I | GGNCC | 7 cut(s) | 703, 1391, 1820, 2085, 2284, 3343, 3447 |
| CseI | GACGC | 1 cut(s) | 3527 |
| Csp6I | GTAC | 8 cut(s) | 516, 551, 673, 774, 894, 2744, 2850, 3530 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1212, 1247 |
| CviQI | GTAC | 8 cut(s) | 516, 551, 673, 774, 894, 2744, 2850, 3530 |
| DdeI | CTNAG | 9 cut(s) | 12, 391, 664, 858, 1404, 1503, 2690, 2706, 3030 |
| DraI | TTTAAA | 3 cut(s) | 1461, 2013, 2094 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1201 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1201 |
| EaeI | YGGCCR | 2 cut(s) | 1105, 1993 |
| Eam1104I | CTCTTC | 9 cut(s) | 89, 336, 495, 609, 1737, 1938, 2163, 2922, 3576 |
| EarI | CTCTTC | 9 cut(s) | 89, 336, 495, 609, 1737, 1938, 2163, 2922, 3576 |
| EciI | GGCGGA | 1 cut(s) | 1539 |
| Eco105I | TACGTA | 1 cut(s) | 554 |
| Eco130I | CCWWGG | 1 cut(s) | 3495 |
| Eco147I | AGGCCT | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 1 cut(s) | 877 |
| Eco32I | GATATC | 1 cut(s) | 966 |
| Eco47I | GGWCC | 6 cut(s) | 1391, 1820, 2085, 2284, 3343, 3447 |
| Eco81I | CCTNAGG | 1 cut(s) | 1503 |
| Eco88I | CYCGRG | 1 cut(s) | 3125 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1391, 1820, 2085, 3343 |
| EcoRI | GAATTC | 2 cut(s) | 505, 1382 |
| EcoRII | CCWGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| EcoRV | GATATC | 1 cut(s) | 966 |
| EcoT14I | CCWWGG | 1 cut(s) | 3495 |
| EcoT38I | GRGCYC | 1 cut(s) | 877 |
| ErhI | CCWWGG | 1 cut(s) | 3495 |
| Esp3I | CGTCTC | 2 cut(s) | 366, 639 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2919, 2951 |
| FaqI | GGGAC | 1 cut(s) | 3460 |
| FbaI | TGATCA | 2 cut(s) | 1614, 3237 |
| FblI | GTMKAC | 3 cut(s) | 5, 2445, 2501 |
| Fnu4HI | GCNGC | 7 cut(s) | 71, 212, 1626, 2514, 2673, 3245, 3650 |
| FriOI | GRGCYC | 1 cut(s) | 877 |
| Fsp4HI | GCNGC | 7 cut(s) | 71, 212, 1626, 2514, 2673, 3245, 3650 |
| GlaI | GCGC | 2 cut(s) | 310, 1780 |
| GluI | GCNGC | 7 cut(s) | 71, 212, 1626, 2514, 2673, 3245, 3650 |
| GsaI | CCCAGC | 5 cut(s) | 465, 830, 1289, 1419, 1827 |
| GsuI | CTGGAG | 4 cut(s) | 1673, 2718, 3462, 3665 |
| HaeIII | GGCC | 5 cut(s) | 77, 705, 1107, 1995, 3400 |
| HapII | CCGG | 2 cut(s) | 120, 3636 |
| HgaI | GACGC | 1 cut(s) | 3527 |
| HhaI | GCGC | 2 cut(s) | 311, 1781 |
| Hin1I | GRCGYC | 1 cut(s) | 163 |
| Hin6I | GCGC | 2 cut(s) | 309, 1779 |
| HinP1I | GCGC | 2 cut(s) | 309, 1779 |
| HincII | GTYRAC | 2 cut(s) | 6, 2712 |
| HindII | GTYRAC | 2 cut(s) | 6, 2712 |
| HpaII | CCGG | 2 cut(s) | 120, 3636 |
| HphI | GGTGA | 6 cut(s) | 956, 1211, 1491, 1892, 2847, 3184 |
| Hpy99I | CGWCG | 2 cut(s) | 10, 165 |
| HpyCH4IV | ACGT | 5 cut(s) | 163, 359, 553, 632, 1487 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 25, 125, 431, 467, 2031, 2513, 2915, 3476, 3518 |
| HpyF3I | CTNAG | 9 cut(s) | 12, 391, 664, 858, 1404, 1503, 2690, 2706, 3030 |
| HpySE526I | ACGT | 5 cut(s) | 163, 359, 553, 632, 1487 |
| Hsp92I | GRCGYC | 1 cut(s) | 163 |
| HspAI | GCGC | 2 cut(s) | 309, 1779 |
| Ksp22I | TGATCA | 2 cut(s) | 1614, 3237 |
| LguI | GCTCTTC | 1 cut(s) | 1737 |
| LmnI | GCTCC | 5 cut(s) | 1567, 1849, 3190, 3484, 3646 |
| Lsp1109I | GCAGC | 7 cut(s) | 82, 223, 1612, 2500, 2659, 3256, 3661 |
| LweI | GCATC | 9 cut(s) | 296, 370, 385, 1604, 2118, 2338, 2350, 2629, 3227 |
| MaeII | ACGT | 5 cut(s) | 163, 359, 553, 632, 1487 |
| MaeIII | GTNAC | 5 cut(s) | 355, 595, 628, 2222, 2696 |
| MbiI | CCGCTC | 1 cut(s) | 2292 |
| MfeI | CAATTG | 3 cut(s) | 419, 1425, 2254 |
| MflI | RGATCY | 7 cut(s) | 30, 346, 619, 854, 1091, 1979, 3431 |
| MhlI | GDGCHC | 6 cut(s) | 224, 290, 877, 1846, 1952, 3481 |
| MlsI | TGGCCA | 2 cut(s) | 1107, 1995 |
| MluNI | TGGCCA | 2 cut(s) | 1107, 1995 |
| MlyI | GAGTC | 4 cut(s) | 396, 669, 1447, 3073 |
| MmeI | TCCRAC | 2 cut(s) | 1700, 3323 |
| Mox20I | TGGCCA | 2 cut(s) | 1107, 1995 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2931 |
| MscI | TGGCCA | 2 cut(s) | 1107, 1995 |
| MslI | CAYNNNNRTG | 4 cut(s) | 171, 711, 1461, 3087 |
| Msp20I | TGGCCA | 2 cut(s) | 1107, 1995 |
| MspI | CCGG | 2 cut(s) | 120, 3636 |
| MspR9I | CCNGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| MunI | CAATTG | 3 cut(s) | 419, 1425, 2254 |
| Mva1269I | GAATGC | 3 cut(s) | 544, 2801, 3019 |
| MvaI | CCWGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 25, 125, 431, 467, 2031, 2513, 2915, 3476, 3518 |
| NlaIV | GGNNCC | 7 cut(s) | 348, 621, 1822, 2086, 3345, 3448, 3608 |
| NspI | RCATGY | 3 cut(s) | 1853, 3488, 3673 |
| NspV | TTCGAA | 1 cut(s) | 886 |
| OliI | CACNNNNGTG | 1 cut(s) | 711 |
| PaeI | GCATGC | 1 cut(s) | 3673 |
| PagI | TCATGA | 2 cut(s) | 2212, 2896 |
| PaqCI | CACCTGC | 1 cut(s) | 3461 |
| PceI | AGGCCT | 1 cut(s) | 77 |
| PciI | ACATGT | 2 cut(s) | 1849, 3484 |
| PciSI | GCTCTTC | 1 cut(s) | 1737 |
| PctI | GAATGC | 3 cut(s) | 544, 2801, 3019 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2931 |
| PkrI | GCNGC | 7 cut(s) | 72, 213, 1627, 2515, 2674, 3246, 3651 |
| PleI | GAGTC | 4 cut(s) | 395, 668, 1446, 3072 |
| PpsI | GAGTC | 4 cut(s) | 395, 668, 1446, 3072 |
| Ppu21I | YACGTR | 1 cut(s) | 554 |
| PpuMI | RGGWCCY | 4 cut(s) | 1391, 1820, 2085, 3343 |
| PscI | ACATGT | 2 cut(s) | 1849, 3484 |
| PshAI | GACNNNNGTC | 2 cut(s) | 1263, 1551 |
| PshBI | ATTAAT | 1 cut(s) | 3050 |
| PsiI | TTATAA | 1 cut(s) | 3548 |
| Psp5II | RGGWCCY | 4 cut(s) | 1391, 1820, 2085, 3343 |
| Psp6I | CCWGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| PspFI | CCCAGC | 5 cut(s) | 461, 826, 1285, 1415, 1823 |
| PspGI | CCWGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| PspN4I | GGNNCC | 7 cut(s) | 348, 621, 1822, 2086, 3345, 3448, 3608 |
| PspPI | GGNCC | 7 cut(s) | 703, 1391, 1820, 2085, 2284, 3343, 3447 |
| PspPPI | RGGWCCY | 4 cut(s) | 1391, 1820, 2085, 3343 |
| PstI | CTGCAG | 1 cut(s) | 209 |
| PsuI | RGATCY | 7 cut(s) | 30, 346, 619, 854, 1091, 1979, 3431 |
| RsaI | GTAC | 8 cut(s) | 517, 552, 674, 775, 895, 2745, 2851, 3531 |
| RsaNI | GTAC | 8 cut(s) | 516, 551, 673, 774, 894, 2744, 2850, 3530 |
| RseI | CAYNNNNRTG | 4 cut(s) | 171, 711, 1461, 3087 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SapI | GCTCTTC | 1 cut(s) | 1737 |
| SatI | GCNGC | 7 cut(s) | 71, 212, 1626, 2514, 2673, 3245, 3650 |
| Sau96I | GGNCC | 7 cut(s) | 703, 1391, 1820, 2085, 2284, 3343, 3447 |
| SchI | GAGTC | 4 cut(s) | 396, 669, 1447, 3073 |
| ScrFI | CCNGG | 4 cut(s) | 768, 2234, 2471, 2619 |
| SduI | GDGCHC | 6 cut(s) | 224, 290, 877, 1846, 1952, 3481 |
| SfaNI | GCATC | 9 cut(s) | 296, 370, 385, 1604, 2118, 2338, 2350, 2629, 3227 |
| SfcI | CTRYAG | 2 cut(s) | 195, 205 |
| SfuI | TTCGAA | 1 cut(s) | 886 |
| SinI | GGWCC | 6 cut(s) | 1391, 1820, 2085, 2284, 3343, 3447 |
| SmiI | ATTTAAAT | 1 cut(s) | 1461 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 171, 711, 1461, 3087 |
| SmlI | CTYRAG | 7 cut(s) | 327, 600, 1638, 2920, 3229, 3275, 3533 |
| SmoI | CTYRAG | 7 cut(s) | 327, 600, 1638, 2920, 3229, 3275, 3533 |
| SnaBI | TACGTA | 1 cut(s) | 554 |
| SpeI | ACTAGT | 1 cut(s) | 3506 |
| SphI | GCATGC | 1 cut(s) | 3673 |
| SseBI | AGGCCT | 1 cut(s) | 77 |
| SsiI | CCGC | 3 cut(s) | 1524, 2292, 3512 |
| SspI | AATATT | 1 cut(s) | 3119 |
| StuI | AGGCCT | 1 cut(s) | 77 |
| StyD4I | CCNGG | 4 cut(s) | 766, 2232, 2469, 2617 |
| StyI | CCWWGG | 1 cut(s) | 3495 |
| SwaI | ATTTAAAT | 1 cut(s) | 1461 |
| TaiI | ACGT | 5 cut(s) | 166, 362, 556, 635, 1490 |
| TaqI | TCGA | 9 cut(s) | 5, 36, 87, 180, 822, 886, 990, 1267, 1320 |
| TatI | WGTACW | 3 cut(s) | 893, 2743, 3529 |
| TseI | GCWGC | 7 cut(s) | 70, 211, 1625, 2513, 2672, 3244, 3649 |
| TspGWI | ACGGA | 4 cut(s) | 239, 1554, 2372, 2540 |
| VneI | GTGCAC | 1 cut(s) | 220 |
| VpaK11BI | GGWCC | 6 cut(s) | 1391, 1820, 2085, 2284, 3343, 3447 |
| VspI | ATTAAT | 1 cut(s) | 3050 |
| XapI | RAATTY | 3 cut(s) | 505, 1382, 1928 |
| XbaI | TCTAGA | 3 cut(s) | 1094, 1982, 3262 |
| XceI | RCATGY | 3 cut(s) | 1853, 3488, 3673 |
| XmiI | GTMKAC | 3 cut(s) | 5, 2445, 2501 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2931 |
| ZraI | GACGTC | 1 cut(s) | 164 |