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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 AT5G55820 |
| fragaria_vesca | FvH4_7g06090 FvH4_7g06090 |
| malus_domestica | MD00G1168200.v1.1 MD00G1168400.v1.1 MD03G1024600.v1.1 MD03G1025200.v1.1 MD03G1025800.v1.1 MD11G1029700.v1.1 MD11G1030200.v1.1 |
| prunus_persica | Prupe.5G032900_v2.0.a1 Prupe.5G032900_v2.0.a1 Prupe.7G022200_v2.0.a1 |
| pyrus_communis | pycom03g02140 pycom03g02150 pycom11g02320 pycom11g02330 |
| rosa_chinensis | RchiOBHm_Chr1g0333641 |
| rosa_laevigata | RLG00000029543 |
| rosa_multiflora | Rmu_sc0002955.1_g000032 Rmu_sc0004487.1_g000019 Rmu_sc0004487.1_g000020 Rmu_sc0038804.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00317360 |
| rosa_rugosa | Rorug01G0110700 Rorug01G0110800 |
| rosa_samantha | Rh1AG133300 Rh1BG102000 Rh1CG127500 Rh1DG139500 |
| rosa_wichuraiana | Rw0G003340 Rw1G011110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1831 |
| Acc36I | ACCTGC | 2 cut(s) | 1831, 4528 |
| Acc65I | GGTACC | 1 cut(s) | 1582 |
| AccB1I | GGYRCC | 1 cut(s) | 1582 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1462, 3211 |
| AccBSI | CCGCTC | 1 cut(s) | 4324 |
| AccI | GTMKAC | 3 cut(s) | 5, 3898, 4779 |
| AciI | CCGC | 3 cut(s) | 3887, 4324, 4806 |
| AclI | AACGTT | 1 cut(s) | 954 |
| AcoI | YGGCCR | 3 cut(s) | 2968, 3202, 3562 |
| AcsI | RAATTY | 9 cut(s) | 1105, 1360, 1604, 1812, 3170, 3432, 3849, 3926, 4904 |
| AcuI | CTGAAG | 7 cut(s) | 831, 1359, 1923, 2034, 2043, 3983, 5034 |
| AcvI | CACGTG | 1 cut(s) | 3200 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 518, 695, 1462, 3211, 3893, 4942 |
| AflIII | ACRYGT | 2 cut(s) | 1049, 1191 |
| AgeI | ACCGGT | 1 cut(s) | 239 |
| AhlI | ACTAGT | 1 cut(s) | 3944 |
| AjiI | CACGTC | 1 cut(s) | 1789 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1309, 1341 |
| Alw21I | GWGCWC | 5 cut(s) | 314, 904, 1998, 2263, 2598 |
| Alw26I | GTCTC | 9 cut(s) | 633, 1129, 1287, 2078, 2979, 4420, 4483, 4652, 4954 |
| Alw44I | GTGCAC | 2 cut(s) | 310, 2259 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 4661 |
| Ama87I | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| AoxI | GGCC | 8 cut(s) | 75, 2567, 2728, 2968, 3202, 3562, 4236, 4554 |
| ApaI | GGGCCC | 1 cut(s) | 2732 |
| ApaLI | GTGCAC | 2 cut(s) | 310, 2259 |
| ApoI | RAATTY | 9 cut(s) | 1105, 1360, 1604, 1812, 3170, 3432, 3849, 3926, 4904 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 323, 355 |
| AseI | ATTAAT | 1 cut(s) | 1431 |
| AsiGI | ACCGGT | 1 cut(s) | 239 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3172, 3679 |
| Asp718I | GGTACC | 1 cut(s) | 1582 |
| AspA2I | CCTAGG | 1 cut(s) | 4667 |
| AspLEI | GCGC | 3 cut(s) | 3122, 4293, 4606 |
| AspS9I | GGNCC | 9 cut(s) | 2728, 2729, 3162, 3492, 3582, 4050, 4058, 4109, 4237 |
| AsuC2I | CCSGG | 2 cut(s) | 2188, 2189 |
| AsuHPI | GGTGA | 9 cut(s) | 91, 238, 501, 678, 2483, 2801, 2829, 2873, 3239 |
| AsuII | TTCGAA | 1 cut(s) | 3875 |
| AsuNHI | GCTAGC | 1 cut(s) | 1181 |
| AvaI | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| AvaII | GGWCC | 6 cut(s) | 3162, 3492, 3582, 4050, 4058, 4109 |
| AvrII | CCTAGG | 1 cut(s) | 4667 |
| AxyI | CCTNAGG | 1 cut(s) | 2841 |
| BaeGI | GKGCMC | 4 cut(s) | 314, 734, 2263, 2732 |
| BalI | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| BamHI | GGATCC | 3 cut(s) | 436, 613, 790 |
| BanI | GGYRCC | 1 cut(s) | 1582 |
| BanII | GRGCYC | 3 cut(s) | 904, 1998, 2732 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4500, 4532 |
| BauI | CACGAG | 1 cut(s) | 4026 |
| BbrPI | CACGTG | 1 cut(s) | 3200 |
| BbsI | GAAGAC | 2 cut(s) | 2610, 4515 |
| Bbv12I | GWGCWC | 5 cut(s) | 314, 904, 1998, 2263, 2598 |
| BbvCI | CCTCAGC | 2 cut(s) | 2418, 2571 |
| BccI | CCATC | 7 cut(s) | 1643, 1688, 2099, 2663, 3527, 4556, 4921 |
| BceAI | ACGGC | 3 cut(s) | 2261, 2696, 3508 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 462, 496, 1822, 1856, 3855, 3889 |
| BcnI | CCSGG | 2 cut(s) | 2188, 2189 |
| BcoDI | GTCTC | 9 cut(s) | 633, 1129, 1287, 2078, 2979, 4420, 4483, 4652, 4954 |
| BcuI | ACTAGT | 1 cut(s) | 3944 |
| BfmI | CTRYAG | 3 cut(s) | 276, 2289, 4200 |
| BfuAI | ACCTGC | 2 cut(s) | 1831, 4528 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 4244 |
| BglII | AGATCT | 2 cut(s) | 856, 1487 |
| BlnI | CCTAGG | 1 cut(s) | 4667 |
| BmcAI | AGTACT | 2 cut(s) | 1135, 1567 |
| Bme18I | GGWCC | 6 cut(s) | 3162, 3492, 3582, 4050, 4058, 4109 |
| BmeT110I | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| BmgBI | CACGTC | 1 cut(s) | 1789 |
| BmgT120I | GGNCC | 9 cut(s) | 2728, 2729, 3162, 3492, 3582, 4050, 4058, 4109, 4237 |
| BmrI | ACTGGG | 2 cut(s) | 1146, 3471 |
| BmtI | GCTAGC | 1 cut(s) | 1185 |
| BmuI | ACTGGG | 2 cut(s) | 1146, 3471 |
| BpiI | GAAGAC | 2 cut(s) | 2610, 4515 |
| BpmI | CTGGAG | 7 cut(s) | 438, 615, 1111, 1546, 1967, 1982, 4262 |
| Bpu10I | CCTNAGC | 5 cut(s) | 2418, 2571, 3243, 4016, 4134 |
| Bpu14I | TTCGAA | 1 cut(s) | 3875 |
| BpuMI | CCSGG | 2 cut(s) | 2188, 2189 |
| BsaAI | YACGTR | 1 cut(s) | 3200 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 518, 695, 1462, 3211, 3893, 4942 |
| Bse118I | RCCGGY | 3 cut(s) | 223, 239, 511 |
| Bse21I | CCTNAGG | 1 cut(s) | 2841 |
| Bse3DI | GCAATG | 3 cut(s) | 247, 3288, 4780 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 518, 695, 1462, 3211, 3893, 4942 |
| BseMI | GCAATG | 3 cut(s) | 247, 3288, 4780 |
| BseMII | CTCAG | 9 cut(s) | 2432, 2585, 2738, 2756, 3234, 3927, 4007, 4653, 4760 |
| BseRI | GAGGAG | 4 cut(s) | 123, 142, 368, 1731 |
| BseSI | GKGCMC | 4 cut(s) | 314, 734, 2263, 2732 |
| BseYI | CCCAGC | 3 cut(s) | 392, 499, 676 |
| BsgI | GTGCAG | 3 cut(s) | 366, 543, 1092 |
| BshFI | GGCC | 8 cut(s) | 77, 2569, 2730, 2970, 3204, 3564, 4238, 4556 |
| BshNI | GGYRCC | 1 cut(s) | 1582 |
| BshTI | ACCGGT | 1 cut(s) | 239 |
| BsiHKAI | GWGCWC | 5 cut(s) | 314, 904, 1998, 2263, 2598 |
| BsiHKCI | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| BsiSI | CCGG | 4 cut(s) | 224, 240, 512, 2188 |
| BslFI | GGGAC | 6 cut(s) | 2642, 2897, 3175, 3641, 3955, 4235 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 518, 695, 1462, 3211, 3893, 4942 |
| BsmAI | GTCTC | 9 cut(s) | 633, 1129, 1287, 2078, 2979, 4420, 4483, 4652, 4954 |
| BsmBI | CGTCTC | 1 cut(s) | 633 |
| BsmFI | GGGAC | 6 cut(s) | 2642, 2897, 3175, 3641, 3955, 4235 |
| BsmI | GAATGC | 6 cut(s) | 1845, 2513, 2713, 2902, 4476, 5061 |
| BsnI | GGCC | 8 cut(s) | 77, 2569, 2730, 2970, 3204, 3564, 4238, 4556 |
| BsoBI | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| Bsp119I | TTCGAA | 1 cut(s) | 3875 |
| Bsp120I | GGGCCC | 1 cut(s) | 2728 |
| Bsp1286I | GDGCHC | 7 cut(s) | 314, 734, 904, 1998, 2263, 2598, 2732 |
| Bsp1407I | TGTACA | 3 cut(s) | 1352, 1589, 1817 |
| Bsp19I | CCATGG | 2 cut(s) | 137, 2391 |
| BspACI | CCGC | 3 cut(s) | 3887, 4324, 4806 |
| BspANI | GGCC | 8 cut(s) | 77, 2569, 2730, 2970, 3204, 3564, 4238, 4556 |
| BspCNI | CTCAG | 9 cut(s) | 2431, 2584, 2737, 2755, 3235, 3926, 4008, 4654, 4761 |
| BspHI | TCATGA | 2 cut(s) | 847, 1285 |
| BspMAI | CTGCAG | 1 cut(s) | 4204 |
| BspMI | ACCTGC | 2 cut(s) | 1831, 4528 |
| BspOI | GCTAGC | 1 cut(s) | 1185 |
| BspQI | GCTCTTC | 3 cut(s) | 2019, 2554, 3121 |
| BspT104I | TTCGAA | 1 cut(s) | 3875 |
| BspT107I | GGYRCC | 1 cut(s) | 1582 |
| BsrBI | CCGCTC | 1 cut(s) | 4324 |
| BsrDI | GCAATG | 3 cut(s) | 247, 3288, 4780 |
| BsrFI | RCCGGY | 3 cut(s) | 223, 239, 511 |
| BsrGI | TGTACA | 3 cut(s) | 1352, 1589, 1817 |
| BssAI | RCCGGY | 3 cut(s) | 223, 239, 511 |
| BssSI | CACGAG | 1 cut(s) | 4026 |
| BssT1I | CCWWGG | 6 cut(s) | 137, 1689, 2391, 2529, 3210, 4667 |
| Bst2BI | CACGAG | 1 cut(s) | 4026 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1178, 1220 |
| BstAUI | TGTACA | 3 cut(s) | 1352, 1589, 1817 |
| BstBAI | YACGTR | 1 cut(s) | 3200 |
| BstBI | TTCGAA | 1 cut(s) | 3875 |
| BstDSI | CCRYGG | 3 cut(s) | 137, 2391, 2459 |
| BstHHI | GCGC | 3 cut(s) | 3122, 4293, 4606 |
| BstMAI | GTCTC | 9 cut(s) | 633, 1129, 1287, 2078, 2979, 4420, 4483, 4652, 4954 |
| BstNSI | RCATGY | 7 cut(s) | 1053, 1195, 1422, 1886, 3388, 3405, 3893 |
| BstSFI | CTRYAG | 3 cut(s) | 276, 2289, 4200 |
| BstSLI | GKGCMC | 4 cut(s) | 314, 734, 2263, 2732 |
| BstV2I | GAAGAC | 2 cut(s) | 2610, 4515 |
| BstX2I | RGATCY | 9 cut(s) | 436, 477, 613, 790, 856, 881, 1339, 1487, 1682 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1570, 3358 |
| BstYI | RGATCY | 9 cut(s) | 436, 477, 613, 790, 856, 881, 1339, 1487, 1682 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2841 |
| BsuRI | GGCC | 8 cut(s) | 77, 2569, 2730, 2970, 3204, 3564, 4238, 4556 |
| BtgI | CCRYGG | 3 cut(s) | 137, 2391, 2459 |
| BtrI | CACGTC | 1 cut(s) | 1789 |
| BtsI | GCAGTG | 1 cut(s) | 373 |
| BveI | ACCTGC | 2 cut(s) | 1831, 4528 |
| CaiI | CAGNNNCTG | 1 cut(s) | 4661 |
| CciI | TCATGA | 2 cut(s) | 847, 1285 |
| CfoI | GCGC | 3 cut(s) | 3122, 4293, 4606 |
| Cfr10I | RCCGGY | 3 cut(s) | 223, 239, 511 |
| Cfr13I | GGNCC | 9 cut(s) | 2728, 2729, 3162, 3492, 3582, 4050, 4058, 4109, 4237 |
| Cfr9I | CCCGGG | 1 cut(s) | 2187 |
| CseI | GACGC | 1 cut(s) | 4253 |
| CsiI | ACCWGGT | 1 cut(s) | 2329 |
| CspAI | ACCGGT | 1 cut(s) | 239 |
| EaeI | YGGCCR | 3 cut(s) | 2968, 3202, 3562 |
| Ecl136II | GAGCTC | 2 cut(s) | 902, 1996 |
| Eco130I | CCWWGG | 6 cut(s) | 137, 1689, 2391, 2529, 3210, 4667 |
| Eco147I | AGGCCT | 1 cut(s) | 77 |
| Eco24I | GRGCYC | 3 cut(s) | 904, 1998, 2732 |
| Eco32I | GATATC | 2 cut(s) | 993, 1558 |
| Eco47I | GGWCC | 6 cut(s) | 3162, 3492, 3582, 4050, 4058, 4109 |
| Eco53kI | GAGCTC | 2 cut(s) | 902, 1996 |
| Eco57I | CTGAAG | 7 cut(s) | 831, 1359, 1923, 2034, 2043, 3983, 5034 |
| Eco72I | CACGTG | 1 cut(s) | 3200 |
| Eco81I | CCTNAGG | 1 cut(s) | 2841 |
| Eco88I | CYCGRG | 3 cut(s) | 2187, 3294, 3780 |
| EcoICRI | GAGCTC | 2 cut(s) | 902, 1996 |
| EcoO109I | RGGNCCY | 5 cut(s) | 2728, 2729, 3162, 3582, 4237 |
| EcoRI | GAATTC | 3 cut(s) | 1105, 1360, 3926 |
| EcoRV | GATATC | 2 cut(s) | 993, 1558 |
| EcoT14I | CCWWGG | 6 cut(s) | 137, 1689, 2391, 2529, 3210, 4667 |
| EcoT22I | ATGCAT | 2 cut(s) | 1884, 2919 |
| EcoT38I | GRGCYC | 3 cut(s) | 904, 1998, 2732 |
| ErhI | CCWWGG | 6 cut(s) | 137, 1689, 2391, 2529, 3210, 4667 |
| Esp3I | CGTCTC | 1 cut(s) | 633 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 2396, 2428, 2922, 2954, 4295, 4327 |
| FaqI | GGGAC | 6 cut(s) | 2642, 2897, 3175, 3641, 3955, 4235 |
| FauNDI | CATATG | 1 cut(s) | 2850 |
| FblI | GTMKAC | 3 cut(s) | 5, 3898, 4779 |
| FriOI | GRGCYC | 3 cut(s) | 904, 1998, 2732 |
| GlaI | GCGC | 3 cut(s) | 3121, 4292, 4605 |
| GsaI | CCCAGC | 3 cut(s) | 396, 503, 680 |
| GsuI | CTGGAG | 7 cut(s) | 438, 615, 1111, 1546, 1967, 1982, 4262 |
| HaeIII | GGCC | 8 cut(s) | 77, 2569, 2730, 2970, 3204, 3564, 4238, 4556 |
| HapII | CCGG | 4 cut(s) | 224, 240, 512, 2188 |
| HgaI | GACGC | 1 cut(s) | 4253 |
| HhaI | GCGC | 3 cut(s) | 3122, 4293, 4606 |
| Hin6I | GCGC | 3 cut(s) | 3120, 4291, 4604 |
| HinP1I | GCGC | 3 cut(s) | 3120, 4291, 4604 |
| HincII | GTYRAC | 3 cut(s) | 6, 58, 3106 |
| HindII | GTYRAC | 3 cut(s) | 6, 58, 3106 |
| HindIII | AAGCTT | 2 cut(s) | 4316, 4996 |
| HpaII | CCGG | 4 cut(s) | 224, 240, 512, 2188 |
| HphI | GGTGA | 9 cut(s) | 91, 238, 501, 678, 2483, 2801, 2829, 2873, 3239 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyCH4IV | ACGT | 7 cut(s) | 319, 626, 954, 1319, 1788, 3199, 3346 |
| HpySE526I | ACGT | 7 cut(s) | 319, 626, 954, 1319, 1788, 3199, 3346 |
| HspAI | GCGC | 3 cut(s) | 3120, 4291, 4604 |
| KflI | GGGWCCC | 1 cut(s) | 3162 |
| KpnI | GGTACC | 1 cut(s) | 1586 |
| LguI | GCTCTTC | 3 cut(s) | 2019, 2554, 3121 |
| MabI | ACCWGGT | 1 cut(s) | 2329 |
| MaeII | ACGT | 7 cut(s) | 319, 626, 954, 1319, 1788, 3199, 3346 |
| MbiI | CCGCTC | 1 cut(s) | 4324 |
| MfeI | CAATTG | 2 cut(s) | 1930, 3109 |
| MflI | RGATCY | 9 cut(s) | 436, 477, 613, 790, 856, 881, 1339, 1487, 1682 |
| MhlI | GDGCHC | 7 cut(s) | 314, 734, 904, 1998, 2263, 2598, 2732 |
| MlsI | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| MluNI | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| MlyI | GAGTC | 3 cut(s) | 1519, 1805, 3905 |
| MmeI | TCCRAC | 4 cut(s) | 1212, 1606, 3038, 3482 |
| Mox20I | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| Mph1103I | ATGCAT | 2 cut(s) | 1884, 2919 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3172, 3679 |
| MscI | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1017, 2040, 2103, 2799, 2912, 4229 |
| Msp20I | TGGCCA | 3 cut(s) | 2970, 3204, 3564 |
| MspA1I | CMGCKG | 2 cut(s) | 4199, 4808 |
| MspI | CCGG | 4 cut(s) | 224, 240, 512, 2188 |
| MunI | CAATTG | 2 cut(s) | 1930, 3109 |
| Mva1269I | GAATGC | 6 cut(s) | 1845, 2513, 2713, 2902, 4476, 5061 |
| NciI | CCSGG | 2 cut(s) | 2188, 2189 |
| NcoI | CCATGG | 2 cut(s) | 137, 2391 |
| NdeI | CATATG | 1 cut(s) | 2850 |
| NheI | GCTAGC | 1 cut(s) | 1181 |
| NmuCI | GTSAC | 3 cut(s) | 1140, 2245, 2433 |
| NsiI | ATGCAT | 2 cut(s) | 1884, 2919 |
| NspI | RCATGY | 7 cut(s) | 1053, 1195, 1422, 1886, 3388, 3405, 3893 |
| NspV | TTCGAA | 1 cut(s) | 3875 |
| PaeI | GCATGC | 3 cut(s) | 1886, 3405, 3893 |
| PaeR7I | CTCGAG | 1 cut(s) | 3294 |
| PagI | TCATGA | 2 cut(s) | 847, 1285 |
| PaqCI | CACCTGC | 1 cut(s) | 1831 |
| PasI | CCCWGGG | 1 cut(s) | 4973 |
| PceI | AGGCCT | 1 cut(s) | 77 |
| PciI | ACATGT | 2 cut(s) | 1049, 1191 |
| PciSI | GCTCTTC | 3 cut(s) | 2019, 2554, 3121 |
| PctI | GAATGC | 6 cut(s) | 1845, 2513, 2713, 2902, 4476, 5061 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3172, 3679 |
| PflFI | GACNNNGTC | 2 cut(s) | 1121, 3903 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1462, 3211 |
| PfoI | TCCNGGA | 1 cut(s) | 2346 |
| PinAI | ACCGGT | 1 cut(s) | 239 |
| PleI | GAGTC | 3 cut(s) | 1519, 1804, 3905 |
| PmaCI | CACGTG | 1 cut(s) | 3200 |
| PmlI | CACGTG | 1 cut(s) | 3200 |
| PpsI | GAGTC | 3 cut(s) | 1519, 1804, 3905 |
| Ppu21I | YACGTR | 1 cut(s) | 3200 |
| PpuMI | RGGWCCY | 2 cut(s) | 3162, 3582 |
| PscI | ACATGT | 2 cut(s) | 1049, 1191 |
| PshBI | ATTAAT | 1 cut(s) | 1431 |
| Psp124BI | GAGCTC | 2 cut(s) | 904, 1998 |
| Psp1406I | AACGTT | 1 cut(s) | 954 |
| Psp5II | RGGWCCY | 2 cut(s) | 3162, 3582 |
| PspCI | CACGTG | 1 cut(s) | 3200 |
| PspFI | CCCAGC | 3 cut(s) | 392, 499, 676 |
| PspOMI | GGGCCC | 1 cut(s) | 2728 |
| PspPI | GGNCC | 9 cut(s) | 2728, 2729, 3162, 3492, 3582, 4050, 4058, 4109, 4237 |
| PspPPI | RGGWCCY | 2 cut(s) | 3162, 3582 |
| PstI | CTGCAG | 1 cut(s) | 4204 |
| PstNI | CAGNNNCTG | 1 cut(s) | 4661 |
| PsuI | RGATCY | 9 cut(s) | 436, 477, 613, 790, 856, 881, 1339, 1487, 1682 |
| PsyI | GACNNNGTC | 2 cut(s) | 1121, 3903 |
| PvuII | CAGCTG | 1 cut(s) | 4199 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1017, 2040, 2103, 2799, 2912, 4229 |
| SacI | GAGCTC | 2 cut(s) | 904, 1998 |
| SalI | GTCGAC | 1 cut(s) | 4 |
| SapI | GCTCTTC | 3 cut(s) | 2019, 2554, 3121 |
| Sau96I | GGNCC | 9 cut(s) | 2728, 2729, 3162, 3492, 3582, 4050, 4058, 4109, 4237 |
| ScaI | AGTACT | 2 cut(s) | 1135, 1567 |
| SchI | GAGTC | 3 cut(s) | 1519, 1805, 3905 |
| SduI | GDGCHC | 7 cut(s) | 314, 734, 904, 1998, 2263, 2598, 2732 |
| SexAI | ACCWGGT | 1 cut(s) | 2329 |
| SfcI | CTRYAG | 3 cut(s) | 276, 2289, 4200 |
| Sfr274I | CTCGAG | 1 cut(s) | 3294 |
| SfuI | TTCGAA | 1 cut(s) | 3875 |
| SinI | GGWCC | 6 cut(s) | 3162, 3492, 3582, 4050, 4058, 4109 |
| SlaI | CTCGAG | 1 cut(s) | 3294 |
| SmaI | CCCGGG | 1 cut(s) | 2189 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1017, 2040, 2103, 2799, 2912, 4229 |
| SpeI | ACTAGT | 1 cut(s) | 3944 |
| SphI | GCATGC | 3 cut(s) | 1886, 3405, 3893 |
| SseBI | AGGCCT | 1 cut(s) | 77 |
| SsiI | CCGC | 3 cut(s) | 3887, 4324, 4806 |
| SspI | AATATT | 2 cut(s) | 2981, 4147 |
| SstI | GAGCTC | 2 cut(s) | 904, 1998 |
| StuI | AGGCCT | 1 cut(s) | 77 |
| StyI | CCWWGG | 6 cut(s) | 137, 1689, 2391, 2529, 3210, 4667 |
| TaiI | ACGT | 7 cut(s) | 322, 629, 957, 1322, 1791, 3202, 3349 |
| TaqI | TCGA | 6 cut(s) | 5, 87, 1274, 2054, 3295, 3875 |
| TatI | WGTACW | 5 cut(s) | 1133, 1352, 1565, 1589, 1817 |
| TseFI | GTSAC | 3 cut(s) | 1140, 2245, 2433 |
| Tsp45I | GTSAC | 3 cut(s) | 1140, 2245, 2433 |
| TspGWI | ACGGA | 4 cut(s) | 135, 1969, 2315, 4501 |
| TspMI | CCCGGG | 1 cut(s) | 2187 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1121, 3903 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1462, 3211 |
| VneI | GTGCAC | 2 cut(s) | 310, 2259 |
| VpaK11BI | GGWCC | 6 cut(s) | 3162, 3492, 3582, 4050, 4058, 4109 |
| VspI | ATTAAT | 1 cut(s) | 1431 |
| XapI | RAATTY | 9 cut(s) | 1105, 1360, 1604, 1812, 3170, 3432, 3849, 3926, 4904 |
| XbaI | TCTAGA | 4 cut(s) | 1060, 1342, 3469, 3907 |
| XceI | RCATGY | 7 cut(s) | 1053, 1195, 1422, 1886, 3388, 3405, 3893 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3572, 4559 |
| XhoI | CTCGAG | 1 cut(s) | 3294 |
| XmaI | CCCGGG | 1 cut(s) | 2187 |
| XmaJI | CCTAGG | 1 cut(s) | 4667 |
| XmiI | GTMKAC | 3 cut(s) | 5, 3898, 4779 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3172, 3679 |
| ZrmI | AGTACT | 2 cut(s) | 1135, 1567 |
| Zsp2I | ATGCAT | 2 cut(s) | 1884, 2919 |