Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Forward (+)

17320957 .. 17334727

Gene Structure 13771 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g21770.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2619 bp

ATGAGACTGTTGCTGCTTGTGAGGGCTTACCAGGTTAATGGTCATATGAAGGCTAAACTAGATCCTTTGGGCTTGGAGCAGAGGGATATCCCCGATGATTTGGACCCTGCGCTATATGGGTTCACTGAGGCTGATCTTGACAGGGAGTTCTTTTTGGGGGTTTGGAGGATGGCTGGGTTTCTTTCTGAGAATCGTCCAGTGCAGACCCTTAGGTCCATATTGACTCGGCTTGAGCAGGCCTATTGTGGGAGCATTGGGTATGAGTATATGCATATTGCTGATAGAAACAAATGTAACTGGTTGAGGGATAAGATTGAGACCCCTACGACGATGCAGTATAACCGGCAGCGCCGTGAGGTTATTCTTGACAGGCTTATTTGGAGTACACAGTTTGAGAACTTCTTGGCCACAAAGTGGACAACAGCAAAGAGGTTCGGGCTTGAAGGTTGTGAAACTCTCATTCCTGGTATGAAGGAGATGTTTGATAGGGCAGCAGATCGTGGGGTTGAGAGCATAGTTATTGGAATGCCACACCGAGGAAGACTGAATGTATTGGGTAATGTTGTCCGAAAACCTTTGCGTCAGATATTTAGTGAATTCAGTGGTGGCACAAAGCCGGTAGATGAAGTTGGACTCTACACAGGGACTGGTGATGTCAAGTATCACTTGGGAACTTCTTATGATCGACCGACTAGAGGTGGGAAGAGAATTCATCTCTCTCTAGTTGCAAATCCAAGTCACTTGGAAGCCGTGGATCCAGTTGTTGTTGGGAAAACTAGAGCAAAGCAATATTATTCAAATGATGTGGACAGAACCAAGAATATGGGGGTTTTGATTCATGGAGATGGTAGCTTTGCTGGACAGGGAGTGGTCTATGAGACTCTGCATCTTAGTGCTCTTCCTAATTACACCACCGGTGGGACTATACACATTGTGGTGAACAACCAAGTTGCCTTCACAACTGACCCAATGTCTGGTAGATCTTCAGAGTACTGCACTGATGTTGCTAAAGCATTGAACGCCCCTATTTTGCACGTTAATGCTGATGACATGGAGGCAGTCGTTCATGTCTGTGAGCTTGCAGCTGAGTGGCGCCAGACTTTCCATTCTGATGTTGTAGTTGATTTAGTGTGTTATCGTCGCTTTGGGCACAATGAGATTGATGAGCCATCATTTACGCAGCCTAAAATGTACAAGGTTATCAGGAATCATCCAAACCCTCTAACTATTTACAAAAACAAACTTTTAGAGTCTGGACAGGTGACACAAGAAGATATTGAGAGGATACAGAGCAAGGTTACTACTATCCTAAATGAAGAGTTCTTAGCTAGCAAAGATTACGTTCCTCAAAGAAGGGACTGGCTTTCATCCCATTGGTCCGGGTTCAAGTCACCAGAACAGCTTTCTCGTATCCGTAATACTGGTGTAAAACCCGAGATTTTGAAGAATGTTGGTAAAGCAATCACAGCCCTACCAGAAAATTTTAAGCCTCACAGAGCAGTAAAGAAGGTATATGGAGAACGTGCACAAATGATTGAGACTGGTGAAGGCATTGACTGGGCCGTTGGAGAAGCACTTGCCTTTGCTACACTGCTAGTAGAAGGGGAAAGGTATTGCCCTCTGGACCATGTTATTGCGAACCAAGATGAGGAGATGTTTACAGTTAGCAACAGCTCACTGTCGGAGTTTGGTGTTCTTGGATTTGAATTGGGCTACTCGATGGAGAATCCAAATGCATTGGTGATTTGGGAAGCTCAATTTGGTGATTTTGCAAATGGGGCTCAAGTTATTTTTGATCAGTTTTTGAGTAGCGGGGAGTCAAAGTGGCTTCGCCAAACTGGGCTTGTTTTACTGCTTCCACATGGTTATGATGGTCAGGGACCTGAACATTCTAGTGCAAGATTGGAGCGTTTTCTTCAGATGAGTGATGACAATCCTTATGTCATACCTGAGATGGATCCTACACTTAGGAAGCAAATTCAGGAATGCAATTGGCAGGTTGTGAATGTGACCACTCCTGCTAATTATTTCCATGTCCTGCGTCGTCAGATAAACAGGGATTTCCGCAAGCCTCTTGTTGTGATGGCTCCTAAAAACTTGCTTCGGCACAAGGACTGCAAATCAAATTTATCTGAGTTTGATGATGTTCAAGGCCACCCAGGTTTTGACAAGCAGGGAACCAGATTTAAACGCCTCATTAAAGATCAAAATGACCACTCTGATCTGGAGGAGGGTATTAGAAGACTTGTTCTTTGCTCTGGGAAGATTTACTATGAGATTGATGAAGAGCGAAGAAAGGCCAGTGCAAAGGATGTTGCAATATGTAGAGTGGAACAGCTTTGTCCCTTCCCATATGACCTCATCCAGCGAGAGCTGAAGCGATATCCAAATGCTGAGATAGTTTGGTGCCAGGAAGAGCCAATGAACATGGGTGCCTACAACTACATTGCGCCTCGCCTATGCACCGCCATGAAGTCATTGAGCAGAGGAACTATCGATGACATCAAATACATTGGCCGCGCTCCATCTGCTGCAACAGCCACTGGTTTCTATCAAGTTCACCTCAAGGAACAAGCAGACATTGTGCATAAAGCAGTGCAGCCGGAGCCAATAGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

873

Amino Acids

99.16

Weight (kDa)

6.3

Isoelectric Point (pI)

37.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	127 - 447	1.5e-61	Dehydrogenase E1 component
Transket_pyr	PF02779	517 - 730	2.2e-49	Transketolase, pyrimidine binding domain
OxoGdeHyase_C	PF16870	753 - 893	1.6e-49	2-oxoglutarate dehydrogenase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	211
Acc36I	ACCTGC	1 cut(s)	1987
AccB1I	GGYRCC	3 cut(s)	1092, 2406, 2432
AccB7I	CCANNNNNTGG	2 cut(s)	414, 974
AccII	CGCG	1 cut(s)	2520
AciI	CCGC	4 cut(s)	1812, 2065, 2466, 2518
AclWI	GGATC	5 cut(s)	56, 749, 762, 1952, 1965
AcoI	YGGCCR	2 cut(s)	405, 2515
AcsI	RAATTY	5 cut(s)	596, 708, 1480, 1977, 2125
AcuI	CTGAAG	3 cut(s)	969, 1901, 2396
AcyI	GRCGYC	1 cut(s)	1093
AdeI	CACNNNGTG	2 cut(s)	414, 934
AfaI	GTAC	3 cut(s)	385, 992, 1193
AfiI	CCNNNNNNNGG	7 cut(s)	246, 414, 536, 695, 918, 974, 1648
AgeI	ACCGGT	1 cut(s)	914
AgsI	TTSAA	7 cut(s)	443, 798, 1018, 1387, 1444, 1706, 2150
AhdI	GACNNNNNGTC	1 cut(s)	970
AjnI	CCWGG	4 cut(s)	30, 463, 2158, 2409
AjuI	GAANNNNNNNTTGG	2 cut(s)	1743, 1775
AluBI	AGCT	9 cut(s)	852, 1078, 1085, 1328, 1402, 1674, 1754, 2338, 2374
AluI	AGCT	9 cut(s)	852, 1078, 1085, 1328, 1402, 1674, 1754, 2338, 2374
Alw21I	GWGCWC	2 cut(s)	898, 1528
Alw26I	GTCTC	3 cut(s)	311, 872, 1532
Alw44I	GTGCAC	1 cut(s)	1524
AlwI	GGATC	5 cut(s)	56, 749, 762, 1952, 1965
AlwNI	CAGNNNCTG	2 cut(s)	647, 2543
Ama87I	CYCGRG	1 cut(s)	1433
AoxI	GGCC	6 cut(s)	237, 405, 1560, 2152, 2298, 2515
ApaLI	GTGCAC	1 cut(s)	1524
ApeKI	GCWGC	7 cut(s)	13, 346, 491, 1082, 1180, 2531, 2599
ApoI	RAATTY	5 cut(s)	596, 708, 1480, 1977, 2125
ArsI	GACNNNNNNTTYG	2 cut(s)	2235, 2267
AsiGI	ACCGGT	1 cut(s)	914
AspLEI	GCGC	5 cut(s)	112, 351, 1095, 2452, 2522
AspS9I	GGNCC	6 cut(s)	103, 213, 1377, 1560, 1624, 1880
AsuC2I	CCSGG	1 cut(s)	1381
AsuHPI	GGTGA	8 cut(s)	662, 949, 1273, 1383, 1556, 1753, 1775, 2552
AsuNHI	GCTAGC	1 cut(s)	1328
AvaI	CYCGRG	1 cut(s)	1433
AvaII	GGWCC	5 cut(s)	103, 213, 1377, 1624, 1880
AxyI	CCTNAGG	1 cut(s)	209
BaeGI	GKGCMC	2 cut(s)	1152, 1528
BalI	TGGCCA	1 cut(s)	407
BamHI	GGATCC	2 cut(s)	754, 1957
BanI	GGYRCC	3 cut(s)	1092, 2406, 2432
BanII	GRGCYC	1 cut(s)	1783
BbsI	GAAGAC	2 cut(s)	547, 2248
Bbv12I	GWGCWC	2 cut(s)	898, 1528
BbvI	GCAGC	6 cut(s)	358, 503, 1094, 1192, 2518, 2611
BccI	CCATC	8 cut(s)	163, 839, 1177, 1714, 1865, 1948, 2077, 2533
BceAI	ACGGC	3 cut(s)	336, 734, 1547
BciT130I	CCWGG	4 cut(s)	32, 465, 2160, 2411
BciVI	GTATCC	2 cut(s)	1278, 1421
BclI	TGATCA	1 cut(s)	1795
BcnI	CCSGG	1 cut(s)	1381
BcoDI	GTCTC	3 cut(s)	311, 872, 1532
BfaI	CTAG	7 cut(s)	59, 693, 722, 777, 1329, 1595, 1893
BfoI	RGCGCY	2 cut(s)	352, 1096
BfuAI	ACCTGC	1 cut(s)	1987
BfuI	GTATCC	2 cut(s)	1278, 1421
BglII	AGATCT	1 cut(s)	980
BisI	GCNGC	8 cut(s)	14, 347, 492, 1083, 1181, 2518, 2532, 2600
BlsI	GCNGC	8 cut(s)	15, 348, 493, 1084, 1182, 2519, 2533, 2601
BmcAI	AGTACT	1 cut(s)	992
Bme1390I	CCNGG	5 cut(s)	32, 465, 1381, 2160, 2411
Bme18I	GGWCC	5 cut(s)	103, 213, 1377, 1624, 1880
BmeRI	GACNNNNNGTC	1 cut(s)	970
BmeT110I	CYCGRG	1 cut(s)	1433
BmgT120I	GGNCC	6 cut(s)	103, 213, 1377, 1560, 1624, 1880
BmrFI	CCNGG	5 cut(s)	32, 465, 1381, 2160, 2411
BmrI	ACTGGG	2 cut(s)	1567, 1848
BmsI	GCATC	2 cut(s)	321, 895
BmtI	GCTAGC	1 cut(s)	1332
BmuI	ACTGGG	2 cut(s)	1567, 1848
BpiI	GAAGAC	2 cut(s)	547, 2248
BpmI	CTGGAG	1 cut(s)	2246
BpuEI	CTTGAG	3 cut(s)	251, 1767, 2549
BpuMI	CCSGG	1 cut(s)	1381
Bsa29I	ATCGAT	1 cut(s)	2496
BsaBI	GATNNNNATC	1 cut(s)	1932
BsaHI	GRCGYC	1 cut(s)	1093
BsaI	GGTCTC	1 cut(s)	311
BsaJI	CCNNGG	3 cut(s)	535, 750, 2158
BsaWI	WCCGGW	1 cut(s)	914
BsaXI	ACNNNNNCTCC	2 cut(s)	1808, 1838
Bsc4I	CCNNNNNNNGG	7 cut(s)	246, 414, 536, 695, 918, 974, 1648
Bse118I	RCCGGY	3 cut(s)	342, 616, 914
Bse21I	CCTNAGG	1 cut(s)	209
Bse3DI	GCAATG	1 cut(s)	2445
Bse8I	GATNNNNATC	1 cut(s)	1932
BseBI	CCWGG	4 cut(s)	32, 465, 2160, 2411
BseCI	ATCGAT	1 cut(s)	2496
BseDI	CCNNGG	3 cut(s)	535, 750, 2158
BseGI	GGATG	5 cut(s)	174, 1210, 1367, 2317, 2361
BseJI	GATNNNNATC	1 cut(s)	1932
BseLI	CCNNNNNNNGG	7 cut(s)	246, 414, 536, 695, 918, 974, 1648
BseMI	GCAATG	1 cut(s)	2445
BseMII	CTCAG	6 cut(s)	117, 177, 1077, 1941, 2124, 2385
BseRI	GAGGAG	2 cut(s)	1664, 2243
BseSI	GKGCMC	2 cut(s)	1152, 1528
BseXI	GCAGC	6 cut(s)	358, 503, 1094, 1192, 2518, 2611
BseYI	CCCAGC	1 cut(s)	173
BsgI	GTGCAG	3 cut(s)	221, 979, 2618
Bsh1236I	CGCG	1 cut(s)	2520
Bsh1285I	CGRYCG	1 cut(s)	689
BshFI	GGCC	6 cut(s)	239, 407, 1562, 2154, 2300, 2517
BshNI	GGYRCC	3 cut(s)	1092, 2406, 2432
BshTI	ACCGGT	1 cut(s)	914
BshVI	ATCGAT	1 cut(s)	2496
BsiEI	CGRYCG	1 cut(s)	689
BsiHKAI	GWGCWC	2 cut(s)	898, 1528
BsiHKCI	CYCGRG	1 cut(s)	1433
BsiSI	CCGG	5 cut(s)	343, 617, 915, 1380, 2603
BslFI	GGGAC	5 cut(s)	658, 934, 1370, 1893, 2328
BslI	CCNNNNNNNGG	7 cut(s)	246, 414, 536, 695, 918, 974, 1648
BsmAI	GTCTC	3 cut(s)	311, 872, 1532
BsmFI	GGGAC	5 cut(s)	658, 934, 1370, 1893, 2328
BsmI	GAATGC	2 cut(s)	531, 1991
BsnI	GGCC	6 cut(s)	239, 407, 1562, 2154, 2300, 2517
Bso31I	GGTCTC	1 cut(s)	311
BsoBI	CYCGRG	1 cut(s)	1433
Bsp1286I	GDGCHC	4 cut(s)	898, 1152, 1528, 1783
Bsp1407I	TGTACA	1 cut(s)	1191
BspACI	CCGC	4 cut(s)	1812, 2065, 2466, 2518
BspANI	GGCC	6 cut(s)	239, 407, 1562, 2154, 2300, 2517
BspCNI	CTCAG	6 cut(s)	118, 178, 1078, 1942, 2125, 2386
BspDI	ATCGAT	1 cut(s)	2496
BspFNI	CGCG	1 cut(s)	2520
BspMI	ACCTGC	1 cut(s)	1987
BspOI	GCTAGC	1 cut(s)	1332
BspPI	GGATC	5 cut(s)	56, 749, 762, 1952, 1965
BspQI	GCTCTTC	3 cut(s)	903, 2280, 2409
BspT107I	GGYRCC	3 cut(s)	1092, 2406, 2432
BspTNI	GGTCTC	1 cut(s)	311
BsrDI	GCAATG	1 cut(s)	2445
BsrFI	RCCGGY	3 cut(s)	342, 616, 914
BsrGI	TGTACA	1 cut(s)	1191
BssAI	RCCGGY	3 cut(s)	342, 616, 914
BssECI	CCNNGG	3 cut(s)	535, 750, 2158
BssNI	GRCGYC	1 cut(s)	1093
Bst2UI	CCWGG	4 cut(s)	32, 465, 2160, 2411
Bst4CI	ACNGT	4 cut(s)	9, 390, 1663, 1680
Bst6I	CTCTTC	5 cut(s)	698, 903, 1311, 2280, 2409
BstACI	GRCGYC	1 cut(s)	1093
BstAUI	TGTACA	1 cut(s)	1191
BstC8I	GCNNGC	4 cut(s)	237, 1080, 1330, 2069
BstDSI	CCRYGG	1 cut(s)	750
BstF5I	GGATG	5 cut(s)	174, 1210, 1367, 2317, 2361
BstFNI	CGCG	1 cut(s)	2520
BstH2I	RGCGCY	2 cut(s)	352, 1096
BstHHI	GCGC	5 cut(s)	112, 351, 1095, 2452, 2522
BstMAI	GTCTC	3 cut(s)	311, 872, 1532
BstMCI	CGRYCG	1 cut(s)	689
BstMWI	GCNNNNNNNGC	6 cut(s)	1019, 1466, 1778, 2528, 2537, 2605
BstNI	CCWGG	4 cut(s)	32, 465, 2160, 2411
BstSCI	CCNGG	5 cut(s)	30, 463, 1379, 2158, 2409
BstSLI	GKGCMC	2 cut(s)	1152, 1528
BstUI	CGCG	1 cut(s)	2520
BstV1I	GCAGC	6 cut(s)	358, 503, 1094, 1192, 2518, 2611
BstV2I	GAAGAC	2 cut(s)	547, 2248
BstX2I	RGATCY	4 cut(s)	61, 754, 980, 1957
BstXI	CCANNNNNNTGG	2 cut(s)	38, 823
BstYI	RGATCY	4 cut(s)	61, 754, 980, 1957
Bsu15I	ATCGAT	1 cut(s)	2496
Bsu36I	CCTNAGG	1 cut(s)	209
BsuI	GTATCC	2 cut(s)	1278, 1421
BsuRI	GGCC	6 cut(s)	239, 407, 1562, 2154, 2300, 2517
BsuTUI	ATCGAT	1 cut(s)	2496
BtgI	CCRYGG	1 cut(s)	750
BtsCI	GGATG	5 cut(s)	174, 1210, 1367, 2317, 2361
BtsI	GCAGTG	2 cut(s)	1589, 2601
BtsIMutI	CAGTG	9 cut(s)	123, 204, 607, 996, 1589, 1676, 2308, 2541, 2601
BveI	ACCTGC	1 cut(s)	1987
Cac8I	GCNNGC	4 cut(s)	237, 1080, 1330, 2069
CaiI	CAGNNNCTG	2 cut(s)	647, 2543
CfoI	GCGC	5 cut(s)	112, 351, 1095, 2452, 2522
Cfr10I	RCCGGY	3 cut(s)	342, 616, 914
Cfr13I	GGNCC	6 cut(s)	103, 213, 1377, 1560, 1624, 1880
ClaI	ATCGAT	1 cut(s)	2496
CseI	GACGC	2 cut(s)	569, 2030
CsiI	ACCWGGT	1 cut(s)	30
Csp6I	GTAC	3 cut(s)	384, 991, 1192
CspAI	ACCGGT	1 cut(s)	914
CspCI	CAANNNNNGTGG	2 cut(s)	786, 821
CviAII	CATG	8 cut(s)	839, 1051, 1067, 1628, 1862, 2033, 2428, 2470
CviQI	GTAC	3 cut(s)	384, 991, 1192
DinI	GGCGCC	1 cut(s)	1094
DraI	TTTAAA	1 cut(s)	2188
DraIII	CACNNNGTG	2 cut(s)	414, 934
DrdI	GACNNNNNNGTC	1 cut(s)	211
DriI	GACNNNNNGTC	1 cut(s)	970
DseDI	GACNNNNNNGTC	1 cut(s)	211
EaeI	YGGCCR	2 cut(s)	405, 2515
Eam1104I	CTCTTC	5 cut(s)	698, 903, 1311, 2280, 2409
Eam1105I	GACNNNNNGTC	1 cut(s)	970
EarI	CTCTTC	5 cut(s)	698, 903, 1311, 2280, 2409
Eco147I	AGGCCT	1 cut(s)	239
Eco24I	GRGCYC	1 cut(s)	1783
Eco31I	GGTCTC	1 cut(s)	311
Eco32I	GATATC	2 cut(s)	88, 2384
Eco47I	GGWCC	5 cut(s)	103, 213, 1377, 1624, 1880
Eco57I	CTGAAG	3 cut(s)	969, 1901, 2396
Eco81I	CCTNAGG	1 cut(s)	209
Eco88I	CYCGRG	1 cut(s)	1433
EcoO109I	RGGNCCY	1 cut(s)	1880
EcoRI	GAATTC	2 cut(s)	596, 708
EcoRII	CCWGG	4 cut(s)	30, 463, 2158, 2409
EcoRV	GATATC	2 cut(s)	88, 2384
EcoT22I	ATGCAT	2 cut(s)	273, 1738
EcoT38I	GRGCYC	1 cut(s)	1783
EgeI	GGCGCC	1 cut(s)	1094
EheI	GGCGCC	1 cut(s)	1094
FaeI	CATG	8 cut(s)	842, 1054, 1070, 1631, 1865, 2036, 2431, 2473
FalI	AAGNNNNNCTT	2 cut(s)	650, 682
FaqI	GGGAC	5 cut(s)	658, 934, 1370, 1893, 2328
FatI	CATG	8 cut(s)	838, 1050, 1066, 1627, 1861, 2032, 2427, 2469
FauI	CCCGC	1 cut(s)	1805
FauNDI	CATATG	2 cut(s)	45, 2353
FbaI	TGATCA	1 cut(s)	1795
Fnu4HI	GCNGC	8 cut(s)	14, 347, 492, 1083, 1181, 2518, 2532, 2600
FokI	GGATG	5 cut(s)	181, 1197, 1354, 2324, 2348
FriOI	GRGCYC	1 cut(s)	1783
Fsp4HI	GCNGC	8 cut(s)	14, 347, 492, 1083, 1181, 2518, 2532, 2600
FspBI	CTAG	7 cut(s)	59, 693, 722, 777, 1329, 1595, 1893
GlaI	GCGC	5 cut(s)	111, 350, 1094, 2451, 2521
GluI	GCNGC	8 cut(s)	14, 347, 492, 1083, 1181, 2518, 2532, 2600
GsaI	CCCAGC	1 cut(s)	177
GsuI	CTGGAG	1 cut(s)	2246
HaeII	RGCGCY	2 cut(s)	352, 1096
HaeIII	GGCC	6 cut(s)	239, 407, 1562, 2154, 2300, 2517
HapII	CCGG	5 cut(s)	343, 617, 915, 1380, 2603
HgaI	GACGC	2 cut(s)	569, 2030
HhaI	GCGC	5 cut(s)	112, 351, 1095, 2452, 2522
Hin1I	GRCGYC	1 cut(s)	1093
Hin1II	CATG	8 cut(s)	842, 1054, 1070, 1631, 1865, 2036, 2431, 2473
Hin6I	GCGC	5 cut(s)	110, 349, 1093, 2450, 2520
HinP1I	GCGC	5 cut(s)	110, 349, 1093, 2450, 2520
HinfI	GANTC	9 cut(s)	190, 223, 633, 835, 880, 1207, 1250, 1726, 1817
HpaII	CCGG	5 cut(s)	343, 617, 915, 1380, 2603
HphI	GGTGA	8 cut(s)	662, 949, 1273, 1383, 1556, 1753, 1775, 2552
Hpy166II	GTNNAC	8 cut(s)	123, 386, 417, 808, 940, 1526, 1659, 2560
Hpy188III	TCNNGA	7 cut(s)	137, 365, 1204, 1254, 1622, 1982, 2225
Hpy8I	GTNNAC	8 cut(s)	123, 386, 417, 808, 940, 1526, 1659, 2560
Hpy99I	CGWCG	3 cut(s)	331, 1143, 2046
HpyAV	CCTTC	9 cut(s)	43, 437, 466, 964, 1347, 1501, 1541, 1595, 2356
HpyCH4III	ACNGT	4 cut(s)	9, 390, 1663, 1680
HpyCH4IV	ACGT	3 cut(s)	1035, 1341, 1522
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1019, 1466, 1778, 2528, 2537, 2605
HpySE526I	ACGT	3 cut(s)	1035, 1341, 1522
Hsp92I	GRCGYC	1 cut(s)	1093
Hsp92II	CATG	8 cut(s)	842, 1054, 1070, 1631, 1865, 2036, 2431, 2473
HspAI	GCGC	5 cut(s)	110, 349, 1093, 2450, 2520
KasI	GGCGCC	1 cut(s)	1092
Ksp22I	TGATCA	1 cut(s)	1795
LguI	GCTCTTC	3 cut(s)	903, 2280, 2409
LmnI	GCTCC	6 cut(s)	76, 249, 1906, 2092, 2527, 2605
Lsp1109I	GCAGC	6 cut(s)	358, 503, 1094, 1192, 2518, 2611
LweI	GCATC	2 cut(s)	321, 895
MabI	ACCWGGT	1 cut(s)	30
MaeI	CTAG	7 cut(s)	59, 693, 722, 777, 1329, 1595, 1893
MaeII	ACGT	3 cut(s)	1035, 1341, 1522
MaeIII	GTNAC	6 cut(s)	293, 737, 1261, 1297, 1389, 2008
MfeI	CAATTG	1 cut(s)	1990
MflI	RGATCY	4 cut(s)	61, 754, 980, 1957
MhlI	GDGCHC	4 cut(s)	898, 1152, 1528, 1783
MlsI	TGGCCA	1 cut(s)	407
MluNI	TGGCCA	1 cut(s)	407
Mly113I	GGCGCC	1 cut(s)	1093
MlyI	GAGTC	5 cut(s)	217, 627, 874, 1259, 1826
MmeI	TCCRAC	3 cut(s)	610, 1546, 1662
Mox20I	TGGCCA	1 cut(s)	407
Mph1103I	ATGCAT	2 cut(s)	273, 1738
MscI	TGGCCA	1 cut(s)	407
MseI	TTAA	6 cut(s)	36, 1038, 1485, 2187, 2199, 2617
MslI	CAYNNNNRTG	9 cut(s)	843, 891, 935, 1038, 1071, 1110, 1866, 1893, 2468
Msp20I	TGGCCA	1 cut(s)	407
MspA1I	CMGCKG	1 cut(s)	1085
MspI	CCGG	5 cut(s)	343, 617, 915, 1380, 2603
MspR9I	CCNGG	5 cut(s)	32, 465, 1381, 2160, 2411
MunI	CAATTG	1 cut(s)	1990
Mva1269I	GAATGC	2 cut(s)	531, 1991
MvaI	CCWGG	4 cut(s)	32, 465, 2160, 2411
MvnI	CGCG	1 cut(s)	2520
MwoI	GCNNNNNNNGC	6 cut(s)	1019, 1466, 1778, 2528, 2537, 2605
NarI	GGCGCC	1 cut(s)	1093
NciI	CCSGG	1 cut(s)	1381
NdeI	CATATG	2 cut(s)	45, 2353
NheI	GCTAGC	1 cut(s)	1328
NlaIII	CATG	8 cut(s)	842, 1054, 1070, 1631, 1865, 2036, 2431, 2473
NmeAIII	GCCGAG	1 cut(s)	205
NmuCI	GTSAC	4 cut(s)	737, 1261, 1389, 2008
NsiI	ATGCAT	2 cut(s)	273, 1738
PceI	AGGCCT	1 cut(s)	239
PciSI	GCTCTTC	3 cut(s)	903, 2280, 2409
PctI	GAATGC	2 cut(s)	531, 1991
PfeI	GAWTC	4 cut(s)	190, 835, 1207, 1726
PflMI	CCANNNNNTGG	2 cut(s)	414, 974
PinAI	ACCGGT	1 cut(s)	914
PkrI	GCNGC	8 cut(s)	15, 348, 493, 1084, 1182, 2519, 2533, 2601
PleI	GAGTC	5 cut(s)	217, 627, 874, 1258, 1825
PluTI	GGCGCC	1 cut(s)	1096
PpsI	GAGTC	5 cut(s)	217, 627, 874, 1258, 1825
PpuMI	RGGWCCY	1 cut(s)	1880
Psp5II	RGGWCCY	1 cut(s)	1880
Psp6I	CCWGG	4 cut(s)	30, 463, 2158, 2409
PspFI	CCCAGC	1 cut(s)	173
PspGI	CCWGG	4 cut(s)	30, 463, 2158, 2409
PspPI	GGNCC	6 cut(s)	103, 213, 1377, 1560, 1624, 1880
PspPPI	RGGWCCY	1 cut(s)	1880
PstNI	CAGNNNCTG	2 cut(s)	647, 2543
PsuI	RGATCY	4 cut(s)	61, 754, 980, 1957
PvuII	CAGCTG	1 cut(s)	1085
RsaI	GTAC	3 cut(s)	385, 992, 1193
RsaNI	GTAC	3 cut(s)	384, 991, 1192
RseI	CAYNNNNRTG	9 cut(s)	843, 891, 935, 1038, 1071, 1110, 1866, 1893, 2468
SapI	GCTCTTC	3 cut(s)	903, 2280, 2409
SaqAI	TTAA	6 cut(s)	36, 1038, 1485, 2187, 2199, 2617
SatI	GCNGC	8 cut(s)	14, 347, 492, 1083, 1181, 2518, 2532, 2600
Sau96I	GGNCC	6 cut(s)	103, 213, 1377, 1560, 1624, 1880
ScaI	AGTACT	1 cut(s)	992
SchI	GAGTC	5 cut(s)	217, 627, 874, 1259, 1826
ScrFI	CCNGG	5 cut(s)	32, 465, 1381, 2160, 2411
SduI	GDGCHC	4 cut(s)	898, 1152, 1528, 1783
SexAI	ACCWGGT	1 cut(s)	30
SfaNI	GCATC	2 cut(s)	321, 895
SfoI	GGCGCC	1 cut(s)	1094
SgrAI	CRCCGGYG	1 cut(s)	914
SinI	GGWCC	5 cut(s)	103, 213, 1377, 1624, 1880
SmiMI	CAYNNNNRTG	9 cut(s)	843, 891, 935, 1038, 1071, 1110, 1866, 1893, 2468
SmlI	CTYRAG	3 cut(s)	230, 1782, 2564
SmoI	CTYRAG	3 cut(s)	230, 1782, 2564
SseBI	AGGCCT	1 cut(s)	239
SsiI	CCGC	4 cut(s)	1812, 2065, 2466, 2518
SspDI	GGCGCC	1 cut(s)	1092
SspI	AATATT	1 cut(s)	791
SspMI	CTAG	7 cut(s)	59, 693, 722, 777, 1329, 1595, 1893
StuI	AGGCCT	1 cut(s)	239
StyD4I	CCNGG	5 cut(s)	30, 463, 1379, 2158, 2409
TaaI	ACNGT	4 cut(s)	9, 390, 1663, 1680
TaiI	ACGT	3 cut(s)	1038, 1344, 1525
TaqI	TCGA	3 cut(s)	685, 1718, 2496
TaqII	GACCGA	1 cut(s)	703
TatI	WGTACW	3 cut(s)	383, 990, 1191
TauI	GCSGC	1 cut(s)	2520
TfiI	GAWTC	4 cut(s)	190, 835, 1207, 1726
Tru1I	TTAA	6 cut(s)	36, 1038, 1485, 2187, 2199, 2617
Tru9I	TTAA	6 cut(s)	36, 1038, 1485, 2187, 2199, 2617
TscAI	CASTG	9 cut(s)	130, 204, 607, 1003, 1596, 1683, 2308, 2548, 2601
TseFI	GTSAC	4 cut(s)	737, 1261, 1389, 2008
TseI	GCWGC	7 cut(s)	13, 346, 491, 1082, 1180, 2531, 2599
Tsp45I	GTSAC	4 cut(s)	737, 1261, 1389, 2008
TspGWI	ACGGA	1 cut(s)	1403
TspRI	CASTG	9 cut(s)	130, 204, 607, 1003, 1596, 1683, 2308, 2548, 2601
Van91I	CCANNNNNTGG	2 cut(s)	414, 974
VneI	GTGCAC	1 cut(s)	1524
VpaK11BI	GGWCC	5 cut(s)	103, 213, 1377, 1624, 1880
XapI	RAATTY	5 cut(s)	596, 708, 1480, 1977, 2125
XspI	CTAG	7 cut(s)	59, 693, 722, 777, 1329, 1595, 1893
ZrmI	AGTACT	1 cut(s)	992
Zsp2I	ATGCAT	2 cut(s)	273, 1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.