Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Forward (+)

25489512 .. 25494335

Gene Structure 4824 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G230300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3066 bp

ATGACGTGGTTTAGAGCAGGGTCTCGTGTGGCAAAGCTTGCCATTAGGAGAACTCTATCAAACAGTGGATCATATGCGGGGAGGAGGCGGCTCCTTCCGTCGCAAAATCGACACTTTCACACCACATTATGTAAATCAAAGGCCCCAGTTCCTTGCCCTGTGTCTCTCTCTAGGATAACTGATAGTTTCCTGGATGGAACCAGCAGTGTTTATTTGGAGGGGCTTCAGAGGGCTTGGGAAGCCGACCCCAACAGCGTCGATGAGTCGTGGGACAATTTCTTCAGGAATTTCGTGGGTCATCATGCCTCTACATCGCCTGGAGTTTCAGGCCAAACCATTCAAGAGAGTATGCGTTTGTTGTTGCTTGTGAAGGCATACCAGGTTAATGGTCACATGAAAGCTAAATTGGACCCTTTGGGTTTGGAAGAGAGAGCAATCCCAGATGATTTGGACCCTGGTTTATATGGGTTCTCTGAGGCTGATCTTGATAGGGAGTTCTTCTTAGGGGTGTGGAGGATGGCTGGGTTTTTAGCTGAGAACCGTCCCGTGCAGACCCTTCGGTCCATCCTGACCCGGCTTGAGCAGGCTTACTGTGGGACTATTGGGTATGAGTATATGCACATCGCCGATCGTAATAGATGTAACTGGTTGAGAGACAAGATTGAGACTCCGACACCAATGCAATACAATAGGCAGCGTCGTGAGGTTATTCTTGATAGGCTTATTTGGAGTACACAATTTGAGAACTTCTTGGCCACTAAGTGGACAGCAGCAAAGAGGTTTGGGCTTGAAGGTGGAGAAACTCTGATTCCAGGCATGAAAGAGATGTTTGATAGGGCAGCAGATCTCGGGGTTGAGAGCATAGTTATTGGAATGTCTCACAGAGGAAGACTGAATGTATTGGGTAATGTGGTTAGGAAGCCTATGCGACAGATATTTAGTGAATTCAGTGGTGGTACAAAGCCTGTGGAAGAAGTTGGAGGACTATACACAGGGACTGGTGATGTCAAGTATCACTTGGGAACCTCTTATGATCGACCCACGAGAGGCGGGAACAGAATTCATTTATCTTTGCTTGCTAATCCAAGTCACTTGGAAGCTGTGGACCCTGTTGTTGTTGGGAAAACTAGAGCAAAGCAGTATTGTTCGAGTGATGCAGACCGGACGAAGAATATGGCTGTGTTGATTCATGGAGATGGTAGCTTTGCTGGACAAGGTGTTGTCTTCGAGACTCTGCATCTAAGTGCTCTTCCTAATTACACCACTGGTGGGACTATACACATTGTGGTGAACAACCAAGTTGCCTTCACAACTGATCCAATGTCTGGAAGATCTTCACAGTATTGTACTGATGTTGCCAAAGCATTGAGTGCTCCTATTTTCCATGTAAATGCTGATGACATGGAGGCAGTCGTTCATGTCTGTGAGCTTGCAGCTGAATGGCGCCAGACTTTCCATTCTGATGTTGTTGTTGATTTGGTGTGCTATCGTCGATTTGGGCATAATGAGCTGGATGAGCCATCTTTCACGCAGCCCAAAATGTACAAGGTTATCCGGAATCATCCCTCAGCTCTAACAATCTACCAGAACAAACTTCTAGAATCTGGACAAGTGACCAAAGAAGACATTGAAAGGATACAGAACAAGGTTAATTCAATTCTCAATGAAGAATTCTTGGCTAGCAAGGATCATGTTCCTCAAAAAAGGGACTGGCTTTCATCTCATTGGTCTGGATTTAAGTCACCTGAACAGATTTCCCGTATCCTGAATACTGGGGTAAAACCAGAGATTTTGAAGAGTGTTGGCAGAGCAGTCACAGCCCTCCCGGAAACTTTTAAGCCTCACAGAGCAGTAAAGAAGAATTATGAACAACGCGCACAAATGATTGAGACCGGTGAAGGAATTGATTGGGCAGTTGCTGAAGCACTTGCATTTGCTACACTACTAGTAGAAGGTAACCATGTTCGATTGAGCGGTCAGGATGTTGAAAGAGGCACATTTTCTCATCGGCATTCTGTACTTCACGACCAGGAAACTGGGGAAAAGTATTGCCCTCTTGACCATATTATGGAAAACCAAGATGAGGAAATGTTTACAGTTAGCAACAGCTCACTGTCTGAGTTTGGTGTTCTTGGATTTGAATTGGGCTACTCGATGGAGAGTCCAAATGCATTGGTAATCTGGGAAGCTCAATTTGGTGATTTTGCCAATGGAGCTCAAGTTATATTTGATCAGTTTTTGAGTAGTGGGGAGTCCAAATGGCTTCGTCAAACTGGGCTTGTTTTGCTGCTTCCTCATGGTTACCTTGGCCAGGGCCCTGAACATTCTAGTGCACGACTGGAGCGATTTCTTCAGATGAGTGATGACAATCCTGTTGCCATACCTGAGATGGATCCCACACATCGGAAGCAAATTCAGGAATGCAATTGGCAGGTTGTTAATGTGACAACTCCTGCCAACTACTTCCATGTTCTGCGTCGTCAGTTGCACAGGGAATTCCGTAAGCCTCTTATTGTGATGGCTCCTAAAAACCTGCTACGGCACAAGGAGTGCAAATCAAATTTATCCGAATTTGATGATGTGCAAGGCCACCCAGGTTTTGACAAGCAGGGGACCAGATTTAAGCGCCTCATCAAGGACCAGAATGACCACTCTGATCTAGAGGAGGGTATTAGACGTCTAGTTCTTTGCTCTGGGAAGCTTTATTATGAGCTTGACGAAGAGCGAAGAAATGTTGAAGCAAAGGATGTAGCAATTTGTAGAGTGGAACAGCTTTGCCCCTTCCCATATGACCTTATCCAGCGAGAGCTGAAGCGATATCCAAATGCTGAGATAGTTTGGTGCCAGGAAGAGCCAATGAACATGGGTGCATACAGTTATATTGCACCCCGCCTTTGCGCCGCCATGAAGTCTCTCAGCAGAGGAACGATCGACGACATCAAATATGTTGGCCGTGCTCCATCAGCTTCCACAGCCACTGGTTTCCCTCAGGTTCATGAGAAGGAACAAAGCGAGATTTTGCACAACGCTGTGCAGCCGGAGCCAATTGAGTATCACATAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

1022

Amino Acids

115.5

Weight (kDa)

6.4

Isoelectric Point (pI)

41.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	559
AatII	GACGTC	1 cut(s)	2680
Acc36I	ACCTGC	2 cut(s)	2422, 2541
AccB1I	GGYRCC	2 cut(s)	1443, 2841
AccB7I	CCANNNNNTGG	3 cut(s)	762, 1325, 2068
AccBSI	CCGCTC	1 cut(s)	1974
AccII	CGCG	1 cut(s)	1875
AccIII	TCCGGA	1 cut(s)	1554
AciI	CCGC	6 cut(s)	77, 88, 1050, 1974, 2890, 2901
AclWI	GGATC	5 cut(s)	76, 1310, 1695, 2387, 2400
AcoI	YGGCCR	3 cut(s)	753, 2308, 2950
AcsI	RAATTY	8 cut(s)	286, 944, 1059, 1670, 2412, 2495, 2560, 2570
AcuI	CTGAAG	5 cut(s)	209, 265, 1941, 2336, 2831
AcyI	GRCGYC	2 cut(s)	1444, 2677
AdeI	CACNNNGTG	2 cut(s)	762, 1285
AfaI	GTAC	5 cut(s)	733, 958, 1348, 1544, 2019
AfiI	CCNNNNNNNGG	9 cut(s)	762, 1046, 1269, 1325, 2068, 2083, 2311, 2403, 2635
AgeI	ACCGGT	1 cut(s)	1892
AgsI	TTSAA	8 cut(s)	341, 791, 1631, 1656, 1795, 1988, 2141, 2738
AhlI	ACTAGT	1 cut(s)	1945
AjiI	CACGTC	1 cut(s)	6
AjnI	CCWGG	9 cut(s)	189, 316, 378, 454, 811, 2028, 2310, 2593, 2844
AjuI	GAANNNNNNNTTGG	4 cut(s)	389, 421, 2178, 2210
Alw21I	GWGCWC	5 cut(s)	1249, 1375, 2218, 2335, 2959
Alw26I	GTCTC	8 cut(s)	27, 168, 648, 659, 882, 1223, 1883, 2916
Alw44I	GTGCAC	1 cut(s)	2331
AlwI	GGATC	5 cut(s)	76, 1310, 1695, 2387, 2400
AlwNI	CAGNNNCTG	3 cut(s)	998, 1919, 2978
Ama87I	CYCGRG	1 cut(s)	848
Aor13HI	TCCGGA	1 cut(s)	1554
AoxI	GGCC	7 cut(s)	141, 328, 753, 2308, 2314, 2587, 2950
ApaI	GGGCCC	1 cut(s)	2318
ApaLI	GTGCAC	1 cut(s)	2331
ApeKI	GCWGC	7 cut(s)	694, 770, 839, 1433, 1531, 2287, 3034
ApoI	RAATTY	8 cut(s)	286, 944, 1059, 1670, 2412, 2495, 2560, 2570
AsiGI	ACCGGT	1 cut(s)	1892
Asp700I	GAANNNNTTC	1 cut(s)	1333
AspLEI	GCGC	4 cut(s)	1446, 1877, 2628, 2900
AspS9I	GGNCC	9 cut(s)	142, 409, 451, 561, 1105, 2314, 2315, 2613, 2638
AsuC2I	CCSGG	2 cut(s)	574, 1826
AsuHPI	GGTGA	5 cut(s)	1013, 1300, 1734, 1907, 2210
AsuNHI	GCTAGC	1 cut(s)	1679
AvaI	CYCGRG	1 cut(s)	848
AvaII	GGWCC	6 cut(s)	409, 451, 561, 1105, 2613, 2638
AxyI	CCTNAGG	1 cut(s)	2988
BaeGI	GKGCMC	2 cut(s)	2318, 2335
BalI	TGGCCA	2 cut(s)	755, 2310
BamHI	GGATCC	1 cut(s)	2392
BanI	GGYRCC	2 cut(s)	1443, 2841
BanII	GRGCYC	2 cut(s)	2218, 2318
BauI	CACGAG	2 cut(s)	24, 1042
BbsI	GAAGAC	3 cut(s)	895, 1216, 1629
Bbv12I	GWGCWC	5 cut(s)	1249, 1375, 2218, 2335, 2959
BbvCI	CCTCAGC	1 cut(s)	1567
BbvI	GCAGC	7 cut(s)	706, 782, 851, 1445, 1543, 2274, 3046
BccI	CCATC	9 cut(s)	188, 511, 572, 1190, 1528, 2149, 2383, 2512, 2968
BceAI	ACGGC	2 cut(s)	2555, 2937
BcgI	CGANNNNNNTGC	4 cut(s)	539, 573, 661, 695
BciT130I	CCWGG	9 cut(s)	191, 318, 380, 456, 813, 2030, 2312, 2595, 2846
BciVI	GTATCC	2 cut(s)	1629, 1772
BclI	TGATCA	1 cut(s)	2230
BcnI	CCSGG	2 cut(s)	574, 1826
BcoDI	GTCTC	8 cut(s)	27, 168, 648, 659, 882, 1223, 1883, 2916
BcuI	ACTAGT	1 cut(s)	1945
BfaI	CTAG	8 cut(s)	171, 1128, 1598, 1680, 1946, 2328, 2660, 2681
BfoI	RGCGCY	2 cut(s)	1447, 2629
BfuAI	ACCTGC	2 cut(s)	2422, 2541
BfuI	GTATCC	2 cut(s)	1629, 1772
BglII	AGATCT	2 cut(s)	844, 1331
BisI	GCNGC	9 cut(s)	89, 695, 771, 840, 1434, 1532, 2288, 2901, 3035
BlsI	GCNGC	9 cut(s)	90, 696, 772, 841, 1435, 1533, 2289, 2902, 3036
Bme18I	GGWCC	6 cut(s)	409, 451, 561, 1105, 2613, 2638
BmeT110I	CYCGRG	1 cut(s)	848
BmgBI	CACGTC	1 cut(s)	6
BmgT120I	GGNCC	9 cut(s)	142, 409, 451, 561, 1105, 2314, 2315, 2613, 2638
BmrI	ACTGGG	4 cut(s)	140, 1782, 2046, 2283
BmsI	GCATC	2 cut(s)	1144, 1246
BmtI	GCTAGC	1 cut(s)	1683
BmuI	ACTGGG	4 cut(s)	140, 1782, 2046, 2283
BpiI	GAAGAC	3 cut(s)	895, 1216, 1629
BpmI	CTGGAG	2 cut(s)	339, 2360
Bpu10I	CCTNAGC	1 cut(s)	1567
BpuEI	CTTGAG	2 cut(s)	599, 2202
BpuMI	CCSGG	2 cut(s)	574, 1826
BsaBI	GATNNNNATC	1 cut(s)	2367
BsaHI	GRCGYC	2 cut(s)	1444, 2677
BsaI	GGTCTC	2 cut(s)	27, 1883
BsaJI	CCNNGG	4 cut(s)	454, 2305, 2311, 2593
BsaWI	WCCGGW	3 cut(s)	1161, 1554, 1892
BsaXI	ACNNNNNCTCC	2 cut(s)	2205, 2235
Bsc4I	CCNNNNNNNGG	9 cut(s)	762, 1046, 1269, 1325, 2068, 2083, 2311, 2403, 2635
Bse118I	RCCGGY	1 cut(s)	1892
Bse21I	CCTNAGG	1 cut(s)	2988
Bse8I	GATNNNNATC	1 cut(s)	2367
BseAI	TCCGGA	1 cut(s)	1554
BseBI	CCWGG	9 cut(s)	191, 318, 380, 456, 813, 2030, 2312, 2595, 2846
BseDI	CCNNGG	4 cut(s)	454, 2305, 2311, 2593
BseGI	GGATG	7 cut(s)	199, 522, 564, 1519, 1561, 1987, 2752
BseJI	GATNNNNATC	1 cut(s)	2367
BseLI	CCNNNNNNNGG	9 cut(s)	762, 1046, 1269, 1325, 2068, 2083, 2311, 2403, 2635
BseMII	CTCAG	8 cut(s)	465, 525, 1581, 2109, 2376, 2820, 2929, 3002
BseRI	GAGGAG	2 cut(s)	97, 2678
BseSI	GKGCMC	2 cut(s)	2318, 2335
BseXI	GCAGC	7 cut(s)	706, 782, 851, 1445, 1543, 2274, 3046
BseYI	CCCAGC	1 cut(s)	521
BsgI	GTGCAG	2 cut(s)	569, 3053
Bsh1236I	CGCG	1 cut(s)	1875
Bsh1285I	CGRYCG	2 cut(s)	631, 2931
BshFI	GGCC	7 cut(s)	143, 330, 755, 2310, 2316, 2589, 2952
BshNI	GGYRCC	2 cut(s)	1443, 2841
BshTI	ACCGGT	1 cut(s)	1892
BsiEI	CGRYCG	2 cut(s)	631, 2931
BsiHKAI	GWGCWC	5 cut(s)	1249, 1375, 2218, 2335, 2959
BsiHKCI	CYCGRG	1 cut(s)	848
BsiSI	CCGG	6 cut(s)	574, 1162, 1555, 1826, 1893, 3038
BslFI	GGGAC	7 cut(s)	284, 528, 610, 1009, 1285, 1721, 2626
BslI	CCNNNNNNNGG	9 cut(s)	762, 1046, 1269, 1325, 2068, 2083, 2311, 2403, 2635
BsmAI	GTCTC	8 cut(s)	27, 168, 648, 659, 882, 1223, 1883, 2916
BsmFI	GGGAC	7 cut(s)	284, 528, 610, 1009, 1285, 1721, 2626
BsmI	GAATGC	2 cut(s)	2011, 2426
BsnI	GGCC	7 cut(s)	143, 330, 755, 2310, 2316, 2589, 2952
Bso31I	GGTCTC	2 cut(s)	27, 1883
BsoBI	CYCGRG	1 cut(s)	848
Bsp120I	GGGCCC	1 cut(s)	2314
Bsp1286I	GDGCHC	6 cut(s)	1249, 1375, 2218, 2318, 2335, 2959
Bsp13I	TCCGGA	1 cut(s)	1554
Bsp1407I	TGTACA	1 cut(s)	1542
BspACI	CCGC	6 cut(s)	77, 88, 1050, 1974, 2890, 2901
BspANI	GGCC	7 cut(s)	143, 330, 755, 2310, 2316, 2589, 2952
BspCNI	CTCAG	8 cut(s)	466, 526, 1580, 2110, 2377, 2821, 2928, 3001
BspEI	TCCGGA	1 cut(s)	1554
BspFNI	CGCG	1 cut(s)	1875
BspHI	TCATGA	1 cut(s)	2995
BspMI	ACCTGC	2 cut(s)	2422, 2541
BspOI	GCTAGC	1 cut(s)	1683
BspPI	GGATC	5 cut(s)	76, 1310, 1695, 2387, 2400
BspQI	GCTCTTC	3 cut(s)	1254, 2715, 2844
BspT107I	GGYRCC	2 cut(s)	1443, 2841
BspTNI	GGTCTC	2 cut(s)	27, 1883
BsrBI	CCGCTC	1 cut(s)	1974
BsrFI	RCCGGY	1 cut(s)	1892
BsrGI	TGTACA	1 cut(s)	1542
BssAI	RCCGGY	1 cut(s)	1892
BssECI	CCNNGG	4 cut(s)	454, 2305, 2311, 2593
BssNI	GRCGYC	2 cut(s)	1444, 2677
BssSI	CACGAG	2 cut(s)	24, 1042
BssT1I	CCWWGG	1 cut(s)	2305
Bst2BI	CACGAG	2 cut(s)	24, 1042
Bst2UI	CCWGG	9 cut(s)	191, 318, 380, 456, 813, 2030, 2312, 2595, 2846
Bst4CI	ACNGT	7 cut(s)	65, 542, 593, 1341, 2098, 2115, 2876
Bst6I	CTCTTC	5 cut(s)	420, 1254, 1790, 2715, 2844
BstACI	GRCGYC	2 cut(s)	1444, 2677
BstAPI	GCANNNNNTGC	2 cut(s)	38, 1370
BstAUI	TGTACA	1 cut(s)	1542
BstC8I	GCNNGC	5 cut(s)	39, 585, 1077, 1431, 1681
BstEII	GGTNACC	2 cut(s)	1955, 2300
BstENI	CCTNNNNNAGG	2 cut(s)	2309, 2633
BstF5I	GGATG	7 cut(s)	199, 522, 564, 1519, 1561, 1987, 2752
BstFNI	CGCG	1 cut(s)	1875
BstH2I	RGCGCY	2 cut(s)	1447, 2629
BstHHI	GCGC	4 cut(s)	1446, 1877, 2628, 2900
BstMAI	GTCTC	8 cut(s)	27, 168, 648, 659, 882, 1223, 1883, 2916
BstMCI	CGRYCG	2 cut(s)	631, 2931
BstNI	CCWGG	9 cut(s)	191, 318, 380, 456, 813, 2030, 2312, 2595, 2846
BstPI	GGTNACC	2 cut(s)	1955, 2300
BstSLI	GKGCMC	2 cut(s)	2318, 2335
BstUI	CGCG	1 cut(s)	1875
BstV1I	GCAGC	7 cut(s)	706, 782, 851, 1445, 1543, 2274, 3046
BstV2I	GAAGAC	3 cut(s)	895, 1216, 1629
BstX2I	RGATCY	3 cut(s)	844, 1331, 2392
BstXI	CCANNNNNNTGG	2 cut(s)	386, 2036
BstYI	RGATCY	3 cut(s)	844, 1331, 2392
Bsu36I	CCTNAGG	1 cut(s)	2988
BsuI	GTATCC	2 cut(s)	1629, 1772
BsuRI	GGCC	7 cut(s)	143, 330, 755, 2310, 2316, 2589, 2952
BtgZI	GCGATG	2 cut(s)	297, 607
BtrI	CACGTC	1 cut(s)	6
BtsCI	GGATG	7 cut(s)	199, 522, 564, 1519, 1561, 1987, 2752
BtsI	GCAGTG	1 cut(s)	211
BtsIMutI	CAGTG	6 cut(s)	70, 211, 955, 1263, 2111, 2976
BveI	ACCTGC	2 cut(s)	2422, 2541
Cac8I	GCNNGC	5 cut(s)	39, 585, 1077, 1431, 1681
CaiI	CAGNNNCTG	3 cut(s)	998, 1919, 2978
CciI	TCATGA	1 cut(s)	2995
CfoI	GCGC	4 cut(s)	1446, 1877, 2628, 2900
Cfr10I	RCCGGY	1 cut(s)	1892
Cfr13I	GGNCC	9 cut(s)	142, 409, 451, 561, 1105, 2314, 2315, 2613, 2638
CseI	GACGC	3 cut(s)	244, 686, 2465
CsiI	ACCWGGT	1 cut(s)	378
Csp6I	GTAC	5 cut(s)	732, 957, 1347, 1543, 2018
CspAI	ACCGGT	1 cut(s)	1892
CspCI	CAANNNNNGTGG	2 cut(s)	948, 983
CviQI	GTAC	5 cut(s)	732, 957, 1347, 1543, 2018
DinI	GGCGCC	1 cut(s)	1445
DraIII	CACNNNGTG	2 cut(s)	762, 1285
DrdI	GACNNNNNNGTC	1 cut(s)	559
DseDI	GACNNNNNNGTC	1 cut(s)	559
EaeI	YGGCCR	3 cut(s)	753, 2308, 2950
Eam1104I	CTCTTC	5 cut(s)	420, 1254, 1790, 2715, 2844
EarI	CTCTTC	5 cut(s)	420, 1254, 1790, 2715, 2844
Ecl136II	GAGCTC	1 cut(s)	2216
Eco130I	CCWWGG	1 cut(s)	2305
Eco24I	GRGCYC	2 cut(s)	2218, 2318
Eco31I	GGTCTC	2 cut(s)	27, 1883
Eco32I	GATATC	1 cut(s)	2819
Eco47I	GGWCC	6 cut(s)	409, 451, 561, 1105, 2613, 2638
Eco53kI	GAGCTC	1 cut(s)	2216
Eco57I	CTGAAG	5 cut(s)	209, 265, 1941, 2336, 2831
Eco81I	CCTNAGG	1 cut(s)	2988
Eco88I	CYCGRG	1 cut(s)	848
Eco91I	GGTNACC	2 cut(s)	1955, 2300
EcoICRI	GAGCTC	1 cut(s)	2216
EcoNI	CCTNNNNNAGG	2 cut(s)	2309, 2633
EcoO109I	RGGNCCY	3 cut(s)	142, 2314, 2315
EcoO65I	GGTNACC	2 cut(s)	1955, 2300
EcoRI	GAATTC	4 cut(s)	944, 1059, 1670, 2495
EcoRII	CCWGG	9 cut(s)	189, 316, 378, 454, 811, 2028, 2310, 2593, 2844
EcoRV	GATATC	1 cut(s)	2819
EcoT14I	CCWWGG	1 cut(s)	2305
EcoT22I	ATGCAT	1 cut(s)	2173
EcoT38I	GRGCYC	2 cut(s)	2218, 2318
EgeI	GGCGCC	1 cut(s)	1445
EheI	GGCGCC	1 cut(s)	1445
ErhI	CCWWGG	1 cut(s)	2305
FalI	AAGNNNNNCTT	2 cut(s)	1001, 1033
FaqI	GGGAC	7 cut(s)	284, 528, 610, 1009, 1285, 1721, 2626
FauI	CCCGC	3 cut(s)	70, 1043, 2897
FauNDI	CATATG	2 cut(s)	73, 2788
FbaI	TGATCA	1 cut(s)	2230
Fnu4HI	GCNGC	9 cut(s)	89, 695, 771, 840, 1434, 1532, 2288, 2901, 3035
FokI	GGATG	7 cut(s)	206, 529, 551, 1526, 1548, 1994, 2759
FriOI	GRGCYC	2 cut(s)	2218, 2318
Fsp4HI	GCNGC	9 cut(s)	89, 695, 771, 840, 1434, 1532, 2288, 2901, 3035
FspBI	CTAG	8 cut(s)	171, 1128, 1598, 1680, 1946, 2328, 2660, 2681
GlaI	GCGC	4 cut(s)	1445, 1876, 2627, 2899
GluI	GCNGC	9 cut(s)	89, 695, 771, 840, 1434, 1532, 2288, 2901, 3035
GsaI	CCCAGC	1 cut(s)	525
GsuI	CTGGAG	2 cut(s)	339, 2360
HaeII	RGCGCY	2 cut(s)	1447, 2629
HaeIII	GGCC	7 cut(s)	143, 330, 755, 2310, 2316, 2589, 2952
HapII	CCGG	6 cut(s)	574, 1162, 1555, 1826, 1893, 3038
HgaI	GACGC	3 cut(s)	244, 686, 2465
HhaI	GCGC	4 cut(s)	1446, 1877, 2628, 2900
Hin1I	GRCGYC	2 cut(s)	1444, 2677
Hin6I	GCGC	4 cut(s)	1444, 1875, 2626, 2898
HinP1I	GCGC	4 cut(s)	1444, 1875, 2626, 2898
HindIII	AAGCTT	2 cut(s)	35, 2699
HinfI	GANTC	9 cut(s)	263, 667, 808, 1186, 1231, 1558, 1601, 2161, 2252
HpaII	CCGG	6 cut(s)	574, 1162, 1555, 1826, 1893, 3038
HphI	GGTGA	5 cut(s)	1013, 1300, 1734, 1907, 2210
Hpy166II	GTNNAC	6 cut(s)	734, 765, 1105, 1291, 2094, 2333
Hpy8I	GTNNAC	6 cut(s)	734, 765, 1105, 1291, 2094, 2333
Hpy99I	CGWCG	6 cut(s)	103, 260, 702, 1494, 2481, 2936
HpyAV	CCTTC	9 cut(s)	104, 364, 566, 785, 1315, 1892, 1946, 2791, 2995
HpyCH4III	ACNGT	7 cut(s)	65, 542, 593, 1341, 2098, 2115, 2876
HpyCH4IV	ACGT	2 cut(s)	5, 2677
HpySE526I	ACGT	2 cut(s)	5, 2677
Hsp92I	GRCGYC	2 cut(s)	1444, 2677
HspAI	GCGC	4 cut(s)	1444, 1875, 2626, 2898
KasI	GGCGCC	1 cut(s)	1443
Kpn2I	TCCGGA	1 cut(s)	1554
Ksp22I	TGATCA	1 cut(s)	2230
LguI	GCTCTTC	3 cut(s)	1254, 2715, 2844
LmnI	GCTCC	7 cut(s)	96, 1378, 2213, 2341, 2527, 2962, 3040
Lsp1109I	GCAGC	7 cut(s)	706, 782, 851, 1445, 1543, 2274, 3046
LweI	GCATC	2 cut(s)	1144, 1246
MabI	ACCWGGT	1 cut(s)	378
MaeI	CTAG	8 cut(s)	171, 1128, 1598, 1680, 1946, 2328, 2660, 2681
MaeII	ACGT	2 cut(s)	5, 2677
MaeIII	GTNAC	9 cut(s)	389, 641, 1088, 1612, 1740, 1813, 1955, 2300, 2443
MbiI	CCGCTC	1 cut(s)	1974
MfeI	CAATTG	2 cut(s)	2425, 3045
MflI	RGATCY	3 cut(s)	844, 1331, 2392
MhlI	GDGCHC	6 cut(s)	1249, 1375, 2218, 2318, 2335, 2959
MlsI	TGGCCA	2 cut(s)	755, 2310
MluNI	TGGCCA	2 cut(s)	755, 2310
Mly113I	GGCGCC	1 cut(s)	1444
MlyI	GAGTC	5 cut(s)	272, 661, 1225, 2170, 2261
MmeI	TCCRAC	2 cut(s)	695, 958
Mox20I	TGGCCA	2 cut(s)	755, 2310
Mph1103I	ATGCAT	1 cut(s)	2173
MroI	TCCGGA	1 cut(s)	1554
MroXI	GAANNNNTTC	1 cut(s)	1333
MscI	TGGCCA	2 cut(s)	755, 2310
MseI	TTAA	6 cut(s)	384, 1650, 1737, 1836, 2439, 2622
MslI	CAYNNNNRTG	7 cut(s)	1194, 1242, 1286, 1389, 1422, 1461, 2328
Msp20I	TGGCCA	2 cut(s)	755, 2310
MspA1I	CMGCKG	1 cut(s)	1436
MspI	CCGG	6 cut(s)	574, 1162, 1555, 1826, 1893, 3038
MunI	CAATTG	2 cut(s)	2425, 3045
Mva1269I	GAATGC	2 cut(s)	2011, 2426
MvaI	CCWGG	9 cut(s)	191, 318, 380, 456, 813, 2030, 2312, 2595, 2846
MvnI	CGCG	1 cut(s)	1875
NarI	GGCGCC	1 cut(s)	1444
NciI	CCSGG	2 cut(s)	574, 1826
NdeI	CATATG	2 cut(s)	73, 2788
NheI	GCTAGC	1 cut(s)	1679
NmuCI	GTSAC	6 cut(s)	389, 1088, 1612, 1740, 1813, 2443
NsiI	ATGCAT	1 cut(s)	2173
PagI	TCATGA	1 cut(s)	2995
PciSI	GCTCTTC	3 cut(s)	1254, 2715, 2844
PcsI	WCGNNNNNNNCGW	1 cut(s)	2341
PctI	GAATGC	2 cut(s)	2011, 2426
PdmI	GAANNNNTTC	1 cut(s)	1333
PfeI	GAWTC	4 cut(s)	808, 1186, 1558, 1601
PflMI	CCANNNNNTGG	3 cut(s)	762, 1325, 2068
PfoI	TCCNGGA	2 cut(s)	189, 1824
PinAI	ACCGGT	1 cut(s)	1892
PkrI	GCNGC	9 cut(s)	90, 696, 772, 841, 1435, 1533, 2289, 2902, 3036
Ple19I	CGATCG	2 cut(s)	631, 2931
PleI	GAGTC	5 cut(s)	271, 661, 1225, 2169, 2260
PluTI	GGCGCC	1 cut(s)	1447
PpsI	GAGTC	5 cut(s)	271, 661, 1225, 2169, 2260
Psp124BI	GAGCTC	1 cut(s)	2218
Psp6I	CCWGG	9 cut(s)	189, 316, 378, 454, 811, 2028, 2310, 2593, 2844
PspEI	GGTNACC	2 cut(s)	1955, 2300
PspFI	CCCAGC	1 cut(s)	521
PspGI	CCWGG	9 cut(s)	189, 316, 378, 454, 811, 2028, 2310, 2593, 2844
PspOMI	GGGCCC	1 cut(s)	2314
PspPI	GGNCC	9 cut(s)	142, 409, 451, 561, 1105, 2314, 2315, 2613, 2638
PstNI	CAGNNNCTG	3 cut(s)	998, 1919, 2978
PsuI	RGATCY	3 cut(s)	844, 1331, 2392
PvuI	CGATCG	2 cut(s)	631, 2931
PvuII	CAGCTG	1 cut(s)	1436
RsaI	GTAC	5 cut(s)	733, 958, 1348, 1544, 2019
RsaNI	GTAC	5 cut(s)	732, 957, 1347, 1543, 2018
RseI	CAYNNNNRTG	7 cut(s)	1194, 1242, 1286, 1389, 1422, 1461, 2328
SacI	GAGCTC	1 cut(s)	2218
SapI	GCTCTTC	3 cut(s)	1254, 2715, 2844
SaqAI	TTAA	6 cut(s)	384, 1650, 1737, 1836, 2439, 2622
SatI	GCNGC	9 cut(s)	89, 695, 771, 840, 1434, 1532, 2288, 2901, 3035
Sau96I	GGNCC	9 cut(s)	142, 409, 451, 561, 1105, 2314, 2315, 2613, 2638
SchI	GAGTC	5 cut(s)	272, 661, 1225, 2170, 2261
SduI	GDGCHC	6 cut(s)	1249, 1375, 2218, 2318, 2335, 2959
SexAI	ACCWGGT	1 cut(s)	378
SfaNI	GCATC	2 cut(s)	1144, 1246
SfoI	GGCGCC	1 cut(s)	1445
SinI	GGWCC	6 cut(s)	409, 451, 561, 1105, 2613, 2638
SmiMI	CAYNNNNRTG	7 cut(s)	1194, 1242, 1286, 1389, 1422, 1461, 2328
SmlI	CTYRAG	2 cut(s)	578, 2217
SmoI	CTYRAG	2 cut(s)	578, 2217
SpeI	ACTAGT	1 cut(s)	1945
SsiI	CCGC	6 cut(s)	77, 88, 1050, 1974, 2890, 2901
SspDI	GGCGCC	1 cut(s)	1443
SspMI	CTAG	8 cut(s)	171, 1128, 1598, 1680, 1946, 2328, 2660, 2681
SstI	GAGCTC	1 cut(s)	2218
StyI	CCWWGG	1 cut(s)	2305
TaaI	ACNGT	7 cut(s)	65, 542, 593, 1341, 2098, 2115, 2876
TaiI	ACGT	2 cut(s)	8, 2680
TaqI	TCGA	9 cut(s)	109, 258, 1036, 1148, 1227, 1492, 1966, 2153, 2931
TaqII	GACCGA	1 cut(s)	549
TatI	WGTACW	4 cut(s)	731, 1346, 1542, 2017
TauI	GCSGC	2 cut(s)	91, 2903
TfiI	GAWTC	4 cut(s)	808, 1186, 1558, 1601
Tru1I	TTAA	6 cut(s)	384, 1650, 1737, 1836, 2439, 2622
Tru9I	TTAA	6 cut(s)	384, 1650, 1737, 1836, 2439, 2622
TscAI	CASTG	6 cut(s)	70, 211, 955, 1270, 2118, 2983
TseFI	GTSAC	6 cut(s)	389, 1088, 1612, 1740, 1813, 2443
TseI	GCWGC	7 cut(s)	694, 770, 839, 1433, 1531, 2287, 3034
Tsp45I	GTSAC	6 cut(s)	389, 1088, 1612, 1740, 1813, 2443
TspGWI	ACGGA	2 cut(s)	87, 2489
TspRI	CASTG	6 cut(s)	70, 211, 955, 1270, 2118, 2983
Van91I	CCANNNNNTGG	3 cut(s)	762, 1325, 2068
VneI	GTGCAC	1 cut(s)	2331
VpaK11BI	GGWCC	6 cut(s)	409, 451, 561, 1105, 2613, 2638
XagI	CCTNNNNNAGG	2 cut(s)	2309, 2633
XapI	RAATTY	8 cut(s)	286, 944, 1059, 1670, 2412, 2495, 2560, 2570
XbaI	TCTAGA	2 cut(s)	1597, 2659
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2386
XmnI	GAANNNNTTC	1 cut(s)	1333
XspI	CTAG	8 cut(s)	171, 1128, 1598, 1680, 1946, 2328, 2660, 2681
ZraI	GACGTC	1 cut(s)	2678
Zsp2I	ATGCAT	1 cut(s)	2173

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.