Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Reverse (-)

44585568 .. 44587494

Gene Structure 1927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0326300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGGACAGCAGCAGCATCCTCACAATTCCGAAGGGATTTCGATTCCATCCCACCAACGAGGAGGTGCTGAGCTACTTGGAGATGAAGAATCAGGGCAGGAATTCTGAAATCACAGCCATCATCGCCGAAATCAATGTTTGCGAGCACGAGCCTCGCGATTTACCAGCACTGGTGTTTTCACGGGCAGAACTATTGGACAGGGAGTGGTACATGAGGGCAGAGTCTTCGGACAGGCAGTGGTACTTTTACAGTCGGCGTGAATACAAGTACATCAAGAGCACTCGCTCCAACAGGACTACAAGGGAAGGGTACTGGAAGATCACAGGCAAGGAACGCGCAATCAAGGCCCCGGGCTCCAAAGGGAGAAAGAGGACCTTGACCTTCTACATTAAACGTGGAGTGCCGAAACCCCAGAAGACCAACTGGGTTCTTCATGAGCATTATCTCACCAAGGCAAATTCTGATGACCAGATAGGGGACTTTGTTCTCTGCCGCTTGAAGTACAAGTCAGACGAATCTGATCATGATAAGCAGGTCTGCGATGGAGGTGAAACTGGTACCGGTATGGCCTCCAATGTTGAAAATCAGGCTGCAGCAGAGGGTATGATTGCAGAAGCAGGAGAAAACCTGGCATTCAAGGAGCCGGGAGATGCTGTTTGGAAATCTGATGGCAATGAGCATCAACTTAAAGGCTTGCAAACTGTTCCTTGTGGTAAAGATAGGAATGATCTTCCGATCTCTGTTGAAGGTCAAACTAATAGCTGCAATTCGTCTGATTCTGATATGATTGAAGAGCAACATGATGAGCCAGAAAATCTGGACTCACTCTTTGATCAACCTCCGCCACCTCAACCGCAGTCACCAAAAAAGCTGGGCAATGTTTCACACACCACCAATGCCCATATTGATGAATGTCGCAAGAGGAAAGATCAATTTGGGGATAATAACCCTTCTCCTACTAAACAGAATCATATTTCAACCAATGACGTTGATGAACTAGCTAGCAACACTGCATCTAATTCTAAAAATCAAGCTGCAGATGTAATTCCAGAGGGGTGTTCTCAACCAGGAGAAAATCTGGGATCTGATCCATTTCAGTCACTGGAACCACTATCAATAAACAGAGAACGGAGAGATTTTTCCCATTACAATAATTCTATTGGATGGGATTATATGCCAATTGAAGGTATTGACTCTTCTCTCGATACATTTATTGATGGATGTAGCAGTGACGGACACAACAAAGTCGCCTATGGATTGCATCCCCCAGTGAACTTTTGGTTGAAAGAGAGACCAGCGAATGCATATGGTTCAAATGTCATCCGGAAGTCTACCCTTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

447

Amino Acids

50.32

Weight (kDa)

5.48

Isoelectric Point (pI)

46.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 147	1.7e-28	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	523
Acc65I	GGTACC	1 cut(s)	557
AccB1I	GGYRCC	1 cut(s)	557
AccI	GTMKAC	1 cut(s)	1331
AccII	CGCG	2 cut(s)	156, 336
AccIII	TCCGGA	1 cut(s)	1323
AciI	CCGC	3 cut(s)	493, 842, 854
AclWI	GGATC	2 cut(s)	1082, 1090
AcsI	RAATTY	2 cut(s)	100, 457
AfaI	GTAC	6 cut(s)	209, 242, 269, 311, 503, 559
AfiI	CCNNNNNNNGG	2 cut(s)	475, 1184
AgeI	ACCGGT	1 cut(s)	560
AgsI	TTSAA	9 cut(s)	499, 581, 637, 746, 791, 978, 1184, 1285, 1314
AjnI	CCWGG	2 cut(s)	627, 1066
AluBI	AGCT	5 cut(s)	72, 762, 871, 1001, 1034
AluI	AGCT	5 cut(s)	72, 762, 871, 1001, 1034
Alw21I	GWGCWC	2 cut(s)	147, 281
Alw26I	GTCTC	1 cut(s)	1285
AlwI	GGATC	2 cut(s)	1082, 1090
AlwNI	CAGNNNCTG	1 cut(s)	1102
Ama87I	CYCGRG	1 cut(s)	349
Aor13HI	TCCGGA	1 cut(s)	1323
AoxI	GGCC	2 cut(s)	345, 567
ApeKI	GCWGC	6 cut(s)	9, 12, 590, 593, 762, 1034
ApoI	RAATTY	2 cut(s)	100, 457
ArsI	GACNNNNNNTTYG	2 cut(s)	812, 844
AsiGI	ACCGGT	1 cut(s)	560
Asp718I	GGTACC	1 cut(s)	557
AspLEI	GCGC	1 cut(s)	338
AspS9I	GGNCC	2 cut(s)	346, 372
AsuC2I	CCSGG	3 cut(s)	350, 351, 645
AsuHPI	GGTGA	3 cut(s)	439, 560, 852
AsuNHI	GCTAGC	1 cut(s)	1001
AvaI	CYCGRG	1 cut(s)	349
AvaII	GGWCC	1 cut(s)	372
BanI	GGYRCC	1 cut(s)	557
BanII	GRGCYC	1 cut(s)	356
BarI	GAAGNNNNNNTAC	2 cut(s)	1180, 1212
BauI	CACGAG	1 cut(s)	146
BbsI	GAAGAC	2 cut(s)	216, 422
Bbv12I	GWGCWC	2 cut(s)	147, 281
BbvI	GCAGC	6 cut(s)	21, 24, 577, 605, 749, 1021
BccI	CCATC	6 cut(s)	54, 125, 536, 662, 1158, 1211
BcgI	CGANNNNNNTGC	4 cut(s)	134, 168, 207, 241
BciT130I	CCWGG	2 cut(s)	629, 1068
BclI	TGATCA	2 cut(s)	520, 832
BcnI	CCSGG	3 cut(s)	350, 351, 645
BcoDI	GTCTC	1 cut(s)	1285
BfaI	CTAG	2 cut(s)	998, 1002
BfmI	CTRYAG	2 cut(s)	591, 1035
BfuAI	ACCTGC	1 cut(s)	523
BisI	GCNGC	7 cut(s)	10, 13, 493, 591, 594, 763, 1035
BlpI	GCTNAGC	1 cut(s)	68
BlsI	GCNGC	7 cut(s)	11, 14, 494, 592, 595, 764, 1036
Bme1390I	CCNGG	5 cut(s)	350, 351, 629, 645, 1068
Bme18I	GGWCC	1 cut(s)	372
BmeT110I	CYCGRG	1 cut(s)	349
BmgT120I	GGNCC	2 cut(s)	346, 372
BmiI	GGNNCC	5 cut(s)	348, 355, 559, 642, 1107
BmrFI	CCNGG	5 cut(s)	350, 351, 629, 645, 1068
BmrI	ACTGGG	2 cut(s)	433, 1262
BmsI	GCATC	5 cut(s)	24, 640, 688, 1022, 1270
BmtI	GCTAGC	1 cut(s)	1005
BmuI	ACTGGG	2 cut(s)	433, 1262
BpiI	GAAGAC	2 cut(s)	216, 422
Bpu1102I	GCTNAGC	1 cut(s)	68
BpuMI	CCSGG	3 cut(s)	350, 351, 645
BsaI	GGTCTC	1 cut(s)	1285
BsaJI	CCNNGG	3 cut(s)	348, 349, 450
BsaWI	WCCGGW	2 cut(s)	560, 1323
BsaXI	ACNNNNNCTCC	2 cut(s)	639, 669
Bsc4I	CCNNNNNNNGG	2 cut(s)	475, 1184
Bse118I	RCCGGY	1 cut(s)	560
Bse1I	ACTGG	6 cut(s)	174, 317, 428, 559, 1107, 1268
Bse3DI	GCAATG	2 cut(s)	679, 883
BseAI	TCCGGA	1 cut(s)	1323
BseBI	CCWGG	2 cut(s)	629, 1068
BseDI	CCNNGG	3 cut(s)	348, 349, 450
BseGI	GGATG	6 cut(s)	15, 46, 1169, 1226, 1261, 1320
BseLI	CCNNNNNNNGG	2 cut(s)	475, 1184
BseMI	GCAATG	2 cut(s)	679, 883
BseMII	CTCAG	1 cut(s)	59
BseNI	ACTGG	6 cut(s)	174, 317, 428, 559, 1107, 1268
BseRI	GAGGAG	1 cut(s)	74
BseXI	GCAGC	6 cut(s)	21, 24, 577, 605, 749, 1021
BseYI	CCCAGC	1 cut(s)	871
Bsh1236I	CGCG	2 cut(s)	156, 336
BshFI	GGCC	2 cut(s)	347, 569
BshNI	GGYRCC	1 cut(s)	557
BshTI	ACCGGT	1 cut(s)	560
BsiHKAI	GWGCWC	2 cut(s)	147, 281
BsiHKCI	CYCGRG	1 cut(s)	349
BsiSI	CCGG	4 cut(s)	350, 561, 644, 1324
BslFI	GGGAC	1 cut(s)	491
BslI	CCNNNNNNNGG	2 cut(s)	475, 1184
BsmAI	GTCTC	1 cut(s)	1285
BsmFI	GGGAC	1 cut(s)	491
BsmI	GAATGC	2 cut(s)	632, 1306
BsnI	GGCC	2 cut(s)	347, 569
Bso31I	GGTCTC	1 cut(s)	1285
BsoBI	CYCGRG	1 cut(s)	349
Bsp1286I	GDGCHC	3 cut(s)	147, 281, 356
Bsp13I	TCCGGA	1 cut(s)	1323
Bsp143I	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
Bsp1720I	GCTNAGC	1 cut(s)	68
Bsp68I	TCGCGA	1 cut(s)	156
BspACI	CCGC	3 cut(s)	493, 842, 854
BspANI	GGCC	2 cut(s)	347, 569
BspCNI	CTCAG	1 cut(s)	60
BspEI	TCCGGA	1 cut(s)	1323
BspFNI	CGCG	2 cut(s)	156, 336
BspHI	TCATGA	2 cut(s)	433, 523
BspLI	GGNNCC	5 cut(s)	348, 355, 559, 642, 1107
BspMAI	CTGCAG	2 cut(s)	595, 1039
BspMI	ACCTGC	1 cut(s)	523
BspOI	GCTAGC	1 cut(s)	1005
BspPI	GGATC	2 cut(s)	1082, 1090
BspQI	GCTCTTC	1 cut(s)	786
BspT107I	GGYRCC	1 cut(s)	557
BspTNI	GGTCTC	1 cut(s)	1285
BsrDI	GCAATG	2 cut(s)	679, 883
BsrFI	RCCGGY	1 cut(s)	560
BsrI	ACTGG	6 cut(s)	174, 317, 428, 559, 1107, 1268
BssAI	RCCGGY	1 cut(s)	560
BssECI	CCNNGG	3 cut(s)	348, 349, 450
BssMI	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
BssSI	CACGAG	1 cut(s)	146
BssT1I	CCWWGG	1 cut(s)	450
Bst2BI	CACGAG	1 cut(s)	146
Bst2UI	CCWGG	2 cut(s)	629, 1068
Bst4CI	ACNGT	2 cut(s)	251, 703
Bst6I	CTCTTC	2 cut(s)	786, 1201
BstC8I	GCNNGC	3 cut(s)	143, 695, 1003
BstDEI	CTNAG	1 cut(s)	68
BstF5I	GGATG	6 cut(s)	15, 46, 1169, 1226, 1261, 1320
BstFNI	CGCG	2 cut(s)	156, 336
BstHHI	GCGC	1 cut(s)	338
BstKTI	GATC	8 cut(s)	321, 523, 730, 738, 835, 931, 1085, 1090
BstMAI	GTCTC	1 cut(s)	1285
BstMBI	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
BstMWI	GCNNNNNNNGC	3 cut(s)	122, 333, 344
BstNI	CCWGG	2 cut(s)	629, 1068
BstSCI	CCNGG	5 cut(s)	348, 349, 627, 643, 1066
BstSFI	CTRYAG	2 cut(s)	591, 1035
BstUI	CGCG	2 cut(s)	156, 336
BstV1I	GCAGC	6 cut(s)	21, 24, 577, 605, 749, 1021
BstV2I	GAAGAC	2 cut(s)	216, 422
BstX2I	RGATCY	1 cut(s)	1082
BstYI	RGATCY	1 cut(s)	1082
BsuRI	GGCC	2 cut(s)	347, 569
BtgZI	GCGATG	2 cut(s)	106, 555
BtsCI	GGATG	6 cut(s)	15, 46, 1169, 1226, 1261, 1320
BtsI	GCAGTG	3 cut(s)	242, 1008, 1234
BtsIMutI	CAGTG	6 cut(s)	167, 242, 1008, 1100, 1234, 1275
BtuMI	TCGCGA	1 cut(s)	156
BveI	ACCTGC	1 cut(s)	523
Cac8I	GCNNGC	3 cut(s)	143, 695, 1003
CaiI	CAGNNNCTG	1 cut(s)	1102
CciI	TCATGA	2 cut(s)	433, 523
CfoI	GCGC	1 cut(s)	338
Cfr10I	RCCGGY	1 cut(s)	560
Cfr13I	GGNCC	2 cut(s)	346, 372
Cfr9I	CCCGGG	1 cut(s)	349
Csp6I	GTAC	6 cut(s)	208, 241, 268, 310, 502, 558
CspAI	ACCGGT	1 cut(s)	560
CviAII	CATG	4 cut(s)	211, 434, 524, 800
CviQI	GTAC	6 cut(s)	208, 241, 268, 310, 502, 558
DdeI	CTNAG	1 cut(s)	68
DpnI	GATC	8 cut(s)	320, 522, 729, 737, 834, 930, 1084, 1089
DpnII	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
Eam1104I	CTCTTC	2 cut(s)	786, 1201
EarI	CTCTTC	2 cut(s)	786, 1201
EciI	GGCGGA	1 cut(s)	831
Eco130I	CCWWGG	1 cut(s)	450
Eco24I	GRGCYC	1 cut(s)	356
Eco31I	GGTCTC	1 cut(s)	1285
Eco47I	GGWCC	1 cut(s)	372
Eco88I	CYCGRG	1 cut(s)	349
EcoO109I	RGGNCCY	2 cut(s)	346, 372
EcoRI	GAATTC	1 cut(s)	100
EcoRII	CCWGG	2 cut(s)	627, 1066
EcoT14I	CCWWGG	1 cut(s)	450
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	1 cut(s)	356
ErhI	CCWWGG	1 cut(s)	450
FaeI	CATG	4 cut(s)	214, 437, 527, 803
FalI	AAGNNNNNCTT	2 cut(s)	359, 391
FaqI	GGGAC	1 cut(s)	491
FatI	CATG	4 cut(s)	210, 433, 523, 799
FauNDI	CATATG	1 cut(s)	1306
FbaI	TGATCA	2 cut(s)	520, 832
FblI	GTMKAC	1 cut(s)	1331
Fnu4HI	GCNGC	7 cut(s)	10, 13, 493, 591, 594, 763, 1035
FokI	GGATG	6 cut(s)	2, 33, 1176, 1233, 1248, 1307
FriOI	GRGCYC	1 cut(s)	356
Fsp4HI	GCNGC	7 cut(s)	10, 13, 493, 591, 594, 763, 1035
FspBI	CTAG	2 cut(s)	998, 1002
GlaI	GCGC	1 cut(s)	337
GluI	GCNGC	7 cut(s)	10, 13, 493, 591, 594, 763, 1035
GsaI	CCCAGC	1 cut(s)	875
HaeIII	GGCC	2 cut(s)	347, 569
HapII	CCGG	4 cut(s)	350, 561, 644, 1324
HhaI	GCGC	1 cut(s)	338
Hin1II	CATG	4 cut(s)	214, 437, 527, 803
Hin6I	GCGC	1 cut(s)	336
HinP1I	GCGC	1 cut(s)	336
HinfI	GANTC	8 cut(s)	42, 88, 221, 515, 776, 821, 967, 1193
HpaII	CCGG	4 cut(s)	350, 561, 644, 1324
HphI	GGTGA	3 cut(s)	439, 560, 852
Hpy166II	GTNNAC	2 cut(s)	1273, 1332
Hpy188III	TCNNGA	8 cut(s)	155, 274, 434, 524, 818, 1049, 1202, 1324
Hpy8I	GTNNAC	2 cut(s)	1273, 1332
HpyAV	CCTTC	6 cut(s)	25, 299, 391, 740, 960, 1178
HpyCH4III	ACNGT	2 cut(s)	251, 703
HpyCH4IV	ACGT	2 cut(s)	394, 987
HpyCH4V	TGCA	8 cut(s)	593, 611, 697, 765, 1013, 1037, 1261, 1304
HpyF10VI	GCNNNNNNNGC	3 cut(s)	122, 333, 344
HpyF3I	CTNAG	1 cut(s)	68
HpySE526I	ACGT	2 cut(s)	394, 987
Hsp92II	CATG	4 cut(s)	214, 437, 527, 803
HspAI	GCGC	1 cut(s)	336
Kpn2I	TCCGGA	1 cut(s)	1323
KpnI	GGTACC	1 cut(s)	561
Ksp22I	TGATCA	2 cut(s)	520, 832
Kzo9I	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
LguI	GCTCTTC	1 cut(s)	786
LmnI	GCTCC	3 cut(s)	290, 359, 640
Lsp1109I	GCAGC	6 cut(s)	21, 24, 577, 605, 749, 1021
LweI	GCATC	5 cut(s)	24, 640, 688, 1022, 1270
MaeI	CTAG	2 cut(s)	998, 1002
MaeII	ACGT	2 cut(s)	394, 987
MaeIII	GTNAC	3 cut(s)	858, 1098, 1229
MalI	GATC	8 cut(s)	320, 522, 729, 737, 834, 930, 1084, 1089
MboI	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
MboII	GAAGA	8 cut(s)	97, 216, 328, 422, 427, 722, 803, 1188
MfeI	CAATTG	1 cut(s)	1179
MflI	RGATCY	1 cut(s)	1082
MhlI	GDGCHC	3 cut(s)	147, 281, 356
MluCI	AATT	9 cut(s)	24, 100, 457, 766, 932, 1018, 1044, 1153, 1179
MlyI	GAGTC	3 cut(s)	230, 815, 1187
MmeI	TCCRAC	1 cut(s)	312
Mph1103I	ATGCAT	1 cut(s)	1306
MroI	TCCGGA	1 cut(s)	1323
MseI	TTAA	2 cut(s)	390, 687
MslI	CAYNNNNRTG	1 cut(s)	906
MspI	CCGG	4 cut(s)	350, 561, 644, 1324
MspR9I	CCNGG	5 cut(s)	350, 351, 629, 645, 1068
MunI	CAATTG	1 cut(s)	1179
Mva1269I	GAATGC	2 cut(s)	632, 1306
MvaI	CCWGG	2 cut(s)	629, 1068
MvnI	CGCG	2 cut(s)	156, 336
MwoI	GCNNNNNNNGC	3 cut(s)	122, 333, 344
NciI	CCSGG	3 cut(s)	350, 351, 645
NdeI	CATATG	1 cut(s)	1306
NdeII	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
NheI	GCTAGC	1 cut(s)	1001
NlaIII	CATG	4 cut(s)	214, 437, 527, 803
NlaIV	GGNNCC	5 cut(s)	348, 355, 559, 642, 1107
NmuCI	GTSAC	3 cut(s)	858, 1098, 1229
NruI	TCGCGA	1 cut(s)	156
NsiI	ATGCAT	1 cut(s)	1306
PagI	TCATGA	2 cut(s)	433, 523
PciSI	GCTCTTC	1 cut(s)	786
PcsI	WCGNNNNNNNCGW	1 cut(s)	153
PctI	GAATGC	2 cut(s)	632, 1306
PfeI	GAWTC	5 cut(s)	42, 88, 515, 776, 967
PinAI	ACCGGT	1 cut(s)	560
PkrI	GCNGC	7 cut(s)	11, 14, 494, 592, 595, 764, 1036
PleI	GAGTC	3 cut(s)	229, 815, 1187
PpsI	GAGTC	3 cut(s)	229, 815, 1187
PpuMI	RGGWCCY	1 cut(s)	372
Psp5II	RGGWCCY	1 cut(s)	372
Psp6I	CCWGG	2 cut(s)	627, 1066
PspFI	CCCAGC	1 cut(s)	871
PspGI	CCWGG	2 cut(s)	627, 1066
PspN4I	GGNNCC	5 cut(s)	348, 355, 559, 642, 1107
PspPI	GGNCC	2 cut(s)	346, 372
PspPPI	RGGWCCY	1 cut(s)	372
PstI	CTGCAG	2 cut(s)	595, 1039
PstNI	CAGNNNCTG	1 cut(s)	1102
PsuI	RGATCY	1 cut(s)	1082
RruI	TCGCGA	1 cut(s)	156
RsaI	GTAC	6 cut(s)	209, 242, 269, 311, 503, 559
RsaNI	GTAC	6 cut(s)	208, 241, 268, 310, 502, 558
RseI	CAYNNNNRTG	1 cut(s)	906
SapI	GCTCTTC	1 cut(s)	786
SaqAI	TTAA	2 cut(s)	390, 687
SatI	GCNGC	7 cut(s)	10, 13, 493, 591, 594, 763, 1035
Sau3AI	GATC	8 cut(s)	318, 520, 727, 735, 832, 928, 1082, 1087
Sau96I	GGNCC	2 cut(s)	346, 372
SchI	GAGTC	3 cut(s)	230, 815, 1187
ScrFI	CCNGG	5 cut(s)	350, 351, 629, 645, 1068
SduI	GDGCHC	3 cut(s)	147, 281, 356
SfaNI	GCATC	5 cut(s)	24, 640, 688, 1022, 1270
SfcI	CTRYAG	2 cut(s)	591, 1035
SinI	GGWCC	1 cut(s)	372
SmaI	CCCGGG	1 cut(s)	351
SmiMI	CAYNNNNRTG	1 cut(s)	906
Sse9I	AATT	9 cut(s)	24, 100, 457, 766, 932, 1018, 1044, 1153, 1179
SsiI	CCGC	3 cut(s)	493, 842, 854
SspMI	CTAG	2 cut(s)	998, 1002
StyD4I	CCNGG	5 cut(s)	348, 349, 627, 643, 1066
StyI	CCWWGG	1 cut(s)	450
TaaI	ACNGT	2 cut(s)	251, 703
TaiI	ACGT	2 cut(s)	397, 990
TaqI	TCGA	2 cut(s)	40, 1203
TasI	AATT	9 cut(s)	24, 100, 457, 766, 932, 1018, 1044, 1153, 1179
TatI	WGTACW	2 cut(s)	267, 501
TauI	GCSGC	1 cut(s)	495
TfiI	GAWTC	5 cut(s)	42, 88, 515, 776, 967
Tru1I	TTAA	2 cut(s)	390, 687
Tru9I	TTAA	2 cut(s)	390, 687
TscAI	CASTG	6 cut(s)	174, 242, 1015, 1107, 1234, 1275
TseFI	GTSAC	3 cut(s)	858, 1098, 1229
TseI	GCWGC	6 cut(s)	9, 12, 590, 593, 762, 1034
Tsp45I	GTSAC	3 cut(s)	858, 1098, 1229
TspDTI	ATGAA	4 cut(s)	98, 422, 924, 1008
TspGWI	ACGGA	2 cut(s)	1144, 1248
TspMI	CCCGGG	1 cut(s)	349
TspRI	CASTG	6 cut(s)	174, 242, 1015, 1107, 1234, 1275
VpaK11BI	GGWCC	1 cut(s)	372
XapI	RAATTY	2 cut(s)	100, 457
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1275
XmaI	CCCGGG	1 cut(s)	349
XmiI	GTMKAC	1 cut(s)	1331
XspI	CTAG	2 cut(s)	998, 1002
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.