Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Reverse (-)

44534399 .. 44537614

Gene Structure 3216 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0325800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGAGCTGGGGCCTTTTCACAGTTCCACCAGGATACCGATACCGACCCACTGACGAGGAGCTGCTGAGTGACTTGGAGAAGAAGAATCAGGGCAAGGACTCCCAAATCATGTCCATCATCCCTGAAATCGAGGTGTGCAAGCATGAGCCTCGTGAGCTACCAGAACTGGCGTTCAGAAGGCAGCAAAATCTGGGGTGGAAGCTTTTCTTTTTCTTCTTCTTTTGGTTTACAAGGGCAGAGTCTTGGTATAGTCAGGGCAAGTGGTACTTCTTCGCTCCGCGTGAATACAAGTACCCTAACAGCAATCGCTCCAAGAGGACTACAGGGGAAGGGTCCTGGAAGGTCACAAGCAAGGACCGAGACATCAAGGCGCCGGGCACCAAAGCTGTGATTGGGAGAAAGAGGACCTTGACCTTCTACATTAAACGTGGATTGCTGAAACCCCAGAAGACCGGCTGGGTTATTCATGAGTATTATCTCACTCGGGCAAATTCTGATGAGCAGATAGGGGACTTTGTTGTCTGTTGCTTGAAGTACAAGTCAGACAACTCTGATCATGATGAGGATGCCCCATTCTGCTATCGTGGTAGCTGCAGTATGGGCTCCAATGTTGCAAATCAGGCTGAAGAAAATTTGGCATCCAATGAGCAGGTTAATGTTGTTCCAATTCCCAATGGCAATGATGGAGAAGCTGAAACTGGTGGTGGTACGATTACTGAAGCAGAAGAACGCCTGGCATTTAAGAAGCTGGGAGATGCTCTTCAGATTCCCATTGGAAATCAGCATGAAGTCCAAGGCTTGCAAATTGATCCTTGTAATCTTTCGACCTCTGTTGAAGGTCAAGCTGATAGAATTAATTCATCTGATATGAATGAAGAGCTACTAAATGATCCAGAAAATATGGATTCGTTGTTTCATCCACCCGCGGCACCTCTACTGCATCAGCTACATCAGTCACCAATGTCTACCACCAATGTCCATAATGATGAATGCCGTAAGAGGAAATATCCATTTGAGGATAATCACTCTTCTCATACGAAGAAGAACAATATTTCAACCATTGATGGTGACGAACTAGTTAGCAACACCACATCTAATTCTGAAAATCAAGCTGCAGATGTGATTCCAGAGGGATATTCTCAACCAGGAGCAAATCTGGGATCTGATTTTGATTCATATCCAAAGCAGGCCCAGGGTGACTTTGTTATTTGTCGCGGGTGTGTGATGAAGAATAAATCAGATAAGAAGGATTCTTTGGTCAGTGATGAAGGGGAACCGGATAGTGCGGATGTGTCTAATTGGAAAATTCAAGCGGCACACAAAAATGATGAACCACTTCTTCATCAACCTCAGCCTCTGGATGACAGCTGCTCCTCTGCAGTGTGGTCATCGGCATCCCTAGAGCTGGAAGCTGTTCTGCAAGCCAATGGCACTAATGATGATTGTAACAAGTCGCAATCACCATTTGGAGATATTAATTCTTGTCTAGAAGACAAGAATGAAGTTTCAACCTGTGATGAAAATGAGAGTATGGATGGTGTGTTTGCACAGCTTTGTGACCCACCGGAAGTAAATCTAGATTCACTCTTTTGTTCACTTCAGCCACAAGATGACCGGCTCTCCATACCGCAGTCACCAATATACACAAAGCTGGGAAATGTTCCAGATGCCAATCCCTATTTTGGTGAATGCAATAATTGGCAATCTGCATTTAAGAAAAACATTTCAACCAATGAAGTTGACATACCAATTAGACATATCATGTATAATTTTGAAAATCAAGCTACAGATTGTAGGATTCCAGAGGTGAGAATGGTGCATCGTCAAACCAAAGAAAATATGGAATCATCATTTTATCCATTTCAGCCACAAGATTCAGCACTGCAGTCAATGATGTATCCAATATATGGAGATGCTCTACATAATATTGAATGCAATGAGTTGCAATCTTCGTTTGGGGACTATGACTCCTCTAACAAAGTTGTAGAATACAAGCATTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

667

Amino Acids

75.3

Weight (kDa)

4.81

Isoelectric Point (pI)

51.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	9 - 159	5.9e-28	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	518
Acc36I	ACCTGC	1 cut(s)	640
AccB1I	GGYRCC	3 cut(s)	370, 377, 928
AccB7I	CCANNNNNTGG	1 cut(s)	1907
AccI	GTMKAC	1 cut(s)	965
AccII	CGCG	3 cut(s)	280, 926, 1215
AciI	CCGC	7 cut(s)	278, 924, 926, 1215, 1286, 1313, 1628
AclWI	GGATC	3 cut(s)	803, 884, 1168
AcsI	RAATTY	3 cut(s)	490, 631, 1305
AcuI	CTGAAG	4 cut(s)	645, 738, 746, 1583
AcyI	GRCGYC	1 cut(s)	371
AfaI	GTAC	4 cut(s)	266, 293, 536, 709
AfiI	CCNNNNNNNGG	3 cut(s)	1405, 1682, 1907
AgsI	TTSAA	8 cut(s)	532, 836, 1056, 1310, 1509, 1728, 1775, 1931
AhlI	ACTAGT	1 cut(s)	1075
AjnI	CCWGG	5 cut(s)	28, 335, 732, 1144, 1191
AjuI	GAANNNNNNNTTGG	2 cut(s)	1238, 1270
Alw26I	GTCTC	1 cut(s)	354
AlwI	GGATC	3 cut(s)	803, 884, 1168
AlwNI	CAGNNNCTG	1 cut(s)	1357
Ama87I	CYCGRG	1 cut(s)	483
AoxI	GGCC	2 cut(s)	10, 1188
ApeKI	GCWGC	5 cut(s)	61, 181, 591, 1112, 1368
ApoI	RAATTY	3 cut(s)	490, 631, 1305
AseI	ATTAAT	2 cut(s)	855, 1476
Asp700I	GAANNNNTTC	4 cut(s)	203, 856, 1335, 1413
AspLEI	GCGC	1 cut(s)	373
AspS9I	GGNCC	5 cut(s)	10, 333, 355, 405, 1189
AsuC2I	CCSGG	1 cut(s)	375
AsuHPI	GGTGA	7 cut(s)	948, 1079, 1208, 1452, 1626, 1697, 1819
AvaI	CYCGRG	1 cut(s)	483
AvaII	GGWCC	3 cut(s)	333, 355, 405
BaeGI	GKGCMC	1 cut(s)	380
BanI	GGYRCC	3 cut(s)	370, 377, 928
BanII	GRGCYC	1 cut(s)	605
BarI	GAAGNNNNNNTAC	2 cut(s)	1728, 1760
BauI	CACGAG	1 cut(s)	150
BbsI	GAAGAC	2 cut(s)	455, 1497
BbvCI	CCTCAGC	1 cut(s)	1350
BbvI	GCAGC	5 cut(s)	48, 193, 578, 1099, 1355
BccI	CCATC	4 cut(s)	122, 677, 1058, 1529
BceAI	ACGGC	1 cut(s)	978
BcgI	CGANNNNNNTGC	2 cut(s)	131, 165
BciT130I	CCWGG	5 cut(s)	30, 337, 734, 1146, 1193
BciVI	GTATCC	2 cut(s)	26, 1908
BclI	TGATCA	1 cut(s)	553
BcnI	CCSGG	1 cut(s)	375
BcoDI	GTCTC	1 cut(s)	354
BcuI	ACTAGT	1 cut(s)	1075
BfaI	CTAG	4 cut(s)	1076, 1400, 1487, 1577
BfmI	CTRYAG	6 cut(s)	321, 592, 1113, 1377, 1785, 1883
BfoI	RGCGCY	1 cut(s)	374
BfuAI	ACCTGC	1 cut(s)	640
BfuI	GTATCC	2 cut(s)	26, 1908
BisI	GCNGC	7 cut(s)	62, 182, 592, 927, 1113, 1314, 1369
BlsI	GCNGC	7 cut(s)	63, 183, 593, 928, 1114, 1315, 1370
Bme1390I	CCNGG	6 cut(s)	30, 337, 375, 734, 1146, 1193
Bme18I	GGWCC	3 cut(s)	333, 355, 405
BmeT110I	CYCGRG	1 cut(s)	483
BmgT120I	GGNCC	5 cut(s)	10, 333, 355, 405, 1189
BmiI	GGNNCC	7 cut(s)	11, 334, 372, 379, 604, 930, 1275
BmrFI	CCNGG	6 cut(s)	30, 337, 375, 734, 1146, 1193
BmsI	GCATC	8 cut(s)	556, 647, 745, 949, 1403, 1657, 1828, 1903
BpiI	GAAGAC	2 cut(s)	455, 1497
Bpu10I	CCTNAGC	1 cut(s)	1350
BpuMI	CCSGG	1 cut(s)	375
BsaBI	GATNNNNATC	2 cut(s)	1176, 1671
BsaHI	GRCGYC	1 cut(s)	371
BsaJI	CCNNGG	4 cut(s)	793, 924, 1191, 1192
BsaWI	WCCGGW	2 cut(s)	1276, 1564
BsaXI	ACNNNNNCTCC	6 cut(s)	1355, 1385, 1604, 1634, 1952, 1982
Bsc4I	CCNNNNNNNGG	3 cut(s)	1405, 1682, 1907
Bse118I	RCCGGY	2 cut(s)	452, 1614
Bse1I	ACTGG	2 cut(s)	171, 703
Bse3DI	GCAATG	3 cut(s)	685, 1942, 1996
Bse8I	GATNNNNATC	2 cut(s)	1176, 1671
BseBI	CCWGG	5 cut(s)	30, 337, 734, 1146, 1193
BseDI	CCNNGG	4 cut(s)	793, 924, 1191, 1192
BseGI	GGATG	8 cut(s)	117, 571, 638, 916, 1294, 1366, 1394, 1540
BseJI	GATNNNNATC	2 cut(s)	1176, 1671
BseLI	CCNNNNNNNGG	3 cut(s)	1405, 1682, 1907
BseMI	GCAATG	3 cut(s)	685, 1942, 1996
BseMII	CTCAG	2 cut(s)	56, 1364
BseNI	ACTGG	2 cut(s)	171, 703
BseRI	GAGGAG	3 cut(s)	71, 1363, 1960
BseSI	GKGCMC	1 cut(s)	380
BseXI	GCAGC	5 cut(s)	48, 193, 578, 1099, 1355
BseYI	CCCAGC	4 cut(s)	6, 456, 748, 1651
Bsh1236I	CGCG	3 cut(s)	280, 926, 1215
BshFI	GGCC	2 cut(s)	12, 1190
BshNI	GGYRCC	3 cut(s)	370, 377, 928
BsiHKCI	CYCGRG	1 cut(s)	483
BsiSI	CCGG	5 cut(s)	374, 453, 1277, 1565, 1615
BslFI	GGGAC	2 cut(s)	524, 1973
BslI	CCNNNNNNNGG	3 cut(s)	1405, 1682, 1907
BsmAI	GTCTC	1 cut(s)	354
BsmFI	GGGAC	2 cut(s)	524, 1973
BsmI	GAATGC	3 cut(s)	995, 1694, 1937
BsnI	GGCC	2 cut(s)	12, 1190
BsoBI	CYCGRG	1 cut(s)	483
Bsp1286I	GDGCHC	2 cut(s)	380, 605
Bsp143I	GATC	4 cut(s)	553, 808, 889, 1160
BspACI	CCGC	7 cut(s)	278, 924, 926, 1215, 1286, 1313, 1628
BspANI	GGCC	2 cut(s)	12, 1190
BspCNI	CTCAG	2 cut(s)	57, 1363
BspFNI	CGCG	3 cut(s)	280, 926, 1215
BspHI	TCATGA	2 cut(s)	466, 556
BspLI	GGNNCC	7 cut(s)	11, 334, 372, 379, 604, 930, 1275
BspMAI	CTGCAG	4 cut(s)	596, 1117, 1381, 1887
BspMI	ACCTGC	1 cut(s)	640
BspPI	GGATC	3 cut(s)	803, 884, 1168
BspQI	GCTCTTC	2 cut(s)	765, 870
BspT107I	GGYRCC	3 cut(s)	370, 377, 928
BsrDI	GCAATG	3 cut(s)	685, 1942, 1996
BsrFI	RCCGGY	2 cut(s)	452, 1614
BsrI	ACTGG	2 cut(s)	171, 703
BssAI	RCCGGY	2 cut(s)	452, 1614
BssECI	CCNNGG	4 cut(s)	793, 924, 1191, 1192
BssMI	GATC	4 cut(s)	553, 808, 889, 1160
BssNI	GRCGYC	1 cut(s)	371
BssSI	CACGAG	1 cut(s)	150
BssT1I	CCWWGG	1 cut(s)	793
Bst2BI	CACGAG	1 cut(s)	150
Bst2UI	CCWGG	5 cut(s)	30, 337, 734, 1146, 1193
Bst4CI	ACNGT	1 cut(s)	22
Bst6I	CTCTTC	3 cut(s)	765, 870, 1033
BstACI	GRCGYC	1 cut(s)	371
BstC8I	GCNNGC	4 cut(s)	140, 800, 1188, 1422
BstDEI	CTNAG	2 cut(s)	65, 1350
BstDSI	CCRYGG	1 cut(s)	924
BstF5I	GGATG	8 cut(s)	117, 571, 638, 916, 1294, 1366, 1394, 1540
BstFNI	CGCG	3 cut(s)	280, 926, 1215
BstH2I	RGCGCY	1 cut(s)	374
BstHHI	GCGC	1 cut(s)	373
BstKTI	GATC	4 cut(s)	556, 811, 892, 1163
BstMAI	GTCTC	1 cut(s)	354
BstMBI	GATC	4 cut(s)	553, 808, 889, 1160
BstMWI	GCNNNNNNNGC	3 cut(s)	154, 600, 620
BstNI	CCWGG	5 cut(s)	30, 337, 734, 1146, 1193
BstSCI	CCNGG	6 cut(s)	28, 335, 373, 732, 1144, 1191
BstSFI	CTRYAG	6 cut(s)	321, 592, 1113, 1377, 1785, 1883
BstSLI	GKGCMC	1 cut(s)	380
BstUI	CGCG	3 cut(s)	280, 926, 1215
BstV1I	GCAGC	5 cut(s)	48, 193, 578, 1099, 1355
BstV2I	GAAGAC	2 cut(s)	455, 1497
BstX2I	RGATCY	1 cut(s)	1160
BstYI	RGATCY	1 cut(s)	1160
BsuI	GTATCC	2 cut(s)	26, 1908
BsuRI	GGCC	2 cut(s)	12, 1190
BtgI	CCRYGG	1 cut(s)	924
BtsCI	GGATG	8 cut(s)	117, 571, 638, 916, 1294, 1366, 1394, 1540
BtsI	GCAGTG	2 cut(s)	1386, 1880
BtsIMutI	CAGTG	4 cut(s)	48, 1267, 1386, 1880
BveI	ACCTGC	1 cut(s)	640
Cac8I	GCNNGC	4 cut(s)	140, 800, 1188, 1422
CaiI	CAGNNNCTG	1 cut(s)	1357
CciI	TCATGA	2 cut(s)	466, 556
CfoI	GCGC	1 cut(s)	373
Cfr10I	RCCGGY	2 cut(s)	452, 1614
Cfr13I	GGNCC	5 cut(s)	10, 333, 355, 405, 1189
Cfr42I	CCGCGG	1 cut(s)	927
Csp6I	GTAC	4 cut(s)	265, 292, 535, 708
CviAII	CATG	6 cut(s)	109, 143, 467, 557, 785, 1762
CviQI	GTAC	4 cut(s)	265, 292, 535, 708
DdeI	CTNAG	2 cut(s)	65, 1350
DinI	GGCGCC	1 cut(s)	372
DpnI	GATC	4 cut(s)	555, 810, 891, 1162
DpnII	GATC	4 cut(s)	553, 808, 889, 1160
DrdI	GACNNNNNNGTC	1 cut(s)	518
DseDI	GACNNNNNNGTC	1 cut(s)	518
Eam1104I	CTCTTC	3 cut(s)	765, 870, 1033
EarI	CTCTTC	3 cut(s)	765, 870, 1033
Eco130I	CCWWGG	1 cut(s)	793
Eco24I	GRGCYC	1 cut(s)	605
Eco47I	GGWCC	3 cut(s)	333, 355, 405
Eco57I	CTGAAG	4 cut(s)	645, 738, 746, 1583
Eco88I	CYCGRG	1 cut(s)	483
EcoO109I	RGGNCCY	3 cut(s)	10, 333, 405
EcoRII	CCWGG	5 cut(s)	28, 335, 732, 1144, 1191
EcoT14I	CCWWGG	1 cut(s)	793
EcoT38I	GRGCYC	1 cut(s)	605
EgeI	GGCGCC	1 cut(s)	372
EheI	GGCGCC	1 cut(s)	372
ErhI	CCWWGG	1 cut(s)	793
FaeI	CATG	6 cut(s)	112, 146, 470, 560, 788, 1765
FalI	AAGNNNNNCTT	6 cut(s)	191, 223, 251, 283, 392, 424
FaqI	GGGAC	2 cut(s)	524, 1973
FatI	CATG	6 cut(s)	108, 142, 466, 556, 784, 1761
FauI	CCCGC	2 cut(s)	931, 1208
FbaI	TGATCA	1 cut(s)	553
FblI	GTMKAC	1 cut(s)	965
Fnu4HI	GCNGC	7 cut(s)	62, 182, 592, 927, 1113, 1314, 1369
FokI	GGATG	8 cut(s)	104, 578, 625, 903, 1301, 1373, 1381, 1547
FriOI	GRGCYC	1 cut(s)	605
Fsp4HI	GCNGC	7 cut(s)	62, 182, 592, 927, 1113, 1314, 1369
FspBI	CTAG	4 cut(s)	1076, 1400, 1487, 1577
GlaI	GCGC	1 cut(s)	372
GluI	GCNGC	7 cut(s)	62, 182, 592, 927, 1113, 1314, 1369
GsaI	CCCAGC	4 cut(s)	10, 460, 752, 1655
HaeII	RGCGCY	1 cut(s)	374
HaeIII	GGCC	2 cut(s)	12, 1190
HapII	CCGG	5 cut(s)	374, 453, 1277, 1565, 1615
HhaI	GCGC	1 cut(s)	373
Hin1I	GRCGYC	1 cut(s)	371
Hin1II	CATG	6 cut(s)	112, 146, 470, 560, 788, 1765
Hin6I	GCGC	1 cut(s)	371
HinP1I	GCGC	1 cut(s)	371
HincII	GTYRAC	1 cut(s)	1741
HindII	GTYRAC	1 cut(s)	1741
HindIII	AAGCTT	1 cut(s)	200
HpaII	CCGG	5 cut(s)	374, 453, 1277, 1565, 1615
HphI	GGTGA	7 cut(s)	948, 1079, 1208, 1452, 1626, 1697, 1819
Hpy166II	GTNNAC	4 cut(s)	228, 966, 1595, 1741
Hpy188I	TCNGA	9 cut(s)	176, 496, 544, 553, 765, 865, 1102, 1165, 1240
Hpy8I	GTNNAC	4 cut(s)	228, 966, 1595, 1741
HpyAV	CCTTC	7 cut(s)	171, 323, 334, 424, 830, 1240, 1262
HpyCH4III	ACNGT	1 cut(s)	22
HpyCH4IV	ACGT	1 cut(s)	427
HpyF10VI	GCNNNNNNNGC	3 cut(s)	154, 600, 620
HpyF3I	CTNAG	2 cut(s)	65, 1350
HpySE526I	ACGT	1 cut(s)	427
Hsp92I	GRCGYC	1 cut(s)	371
Hsp92II	CATG	6 cut(s)	112, 146, 470, 560, 788, 1765
HspAI	GCGC	1 cut(s)	371
KasI	GGCGCC	1 cut(s)	370
Ksp22I	TGATCA	1 cut(s)	553
KspI	CCGCGG	1 cut(s)	927
Kzo9I	GATC	4 cut(s)	553, 808, 889, 1160
LguI	GCTCTTC	2 cut(s)	765, 870
LmnI	GCTCC	6 cut(s)	58, 280, 314, 608, 1148, 1376
Lsp1109I	GCAGC	5 cut(s)	48, 193, 578, 1099, 1355
LweI	GCATC	8 cut(s)	556, 647, 745, 949, 1403, 1657, 1828, 1903
MaeI	CTAG	4 cut(s)	1076, 1400, 1487, 1577
MaeII	ACGT	1 cut(s)	427
MaeIII	GTNAC	8 cut(s)	68, 343, 954, 1067, 1196, 1445, 1556, 1632
MalI	GATC	4 cut(s)	555, 810, 891, 1162
MboI	GATC	4 cut(s)	553, 808, 889, 1160
MflI	RGATCY	1 cut(s)	1160
MhlI	GDGCHC	2 cut(s)	380, 605
Mly113I	GGCGCC	1 cut(s)	371
MlyI	GAGTC	3 cut(s)	92, 248, 1961
MroXI	GAANNNNTTC	4 cut(s)	203, 856, 1335, 1413
MseI	TTAA	6 cut(s)	423, 654, 741, 855, 1476, 1713
MslI	CAYNNNNRTG	2 cut(s)	984, 1323
MspA1I	CMGCKG	2 cut(s)	926, 1368
MspI	CCGG	5 cut(s)	374, 453, 1277, 1565, 1615
MspR9I	CCNGG	6 cut(s)	30, 337, 375, 734, 1146, 1193
Mva1269I	GAATGC	3 cut(s)	995, 1694, 1937
MvaI	CCWGG	5 cut(s)	30, 337, 734, 1146, 1193
MvnI	CGCG	3 cut(s)	280, 926, 1215
MwoI	GCNNNNNNNGC	3 cut(s)	154, 600, 620
NarI	GGCGCC	1 cut(s)	371
NciI	CCSGG	1 cut(s)	375
NdeII	GATC	4 cut(s)	553, 808, 889, 1160
NlaIII	CATG	6 cut(s)	112, 146, 470, 560, 788, 1765
NlaIV	GGNNCC	7 cut(s)	11, 334, 372, 379, 604, 930, 1275
NmuCI	GTSAC	7 cut(s)	68, 343, 954, 1067, 1196, 1556, 1632
PagI	TCATGA	2 cut(s)	466, 556
PasI	CCCWGGG	1 cut(s)	1192
PciSI	GCTCTTC	2 cut(s)	765, 870
PctI	GAATGC	3 cut(s)	995, 1694, 1937
PdmI	GAANNNNTTC	4 cut(s)	203, 856, 1335, 1413
PflMI	CCANNNNNTGG	1 cut(s)	1907
PfoI	TCCNGGA	1 cut(s)	335
PkrI	GCNGC	7 cut(s)	63, 183, 593, 928, 1114, 1315, 1370
PleI	GAGTC	3 cut(s)	92, 247, 1961
PluTI	GGCGCC	1 cut(s)	374
PpsI	GAGTC	3 cut(s)	92, 247, 1961
PpuMI	RGGWCCY	2 cut(s)	333, 405
PshBI	ATTAAT	2 cut(s)	855, 1476
Psp5II	RGGWCCY	2 cut(s)	333, 405
Psp6I	CCWGG	5 cut(s)	28, 335, 732, 1144, 1191
PspFI	CCCAGC	4 cut(s)	6, 456, 748, 1651
PspGI	CCWGG	5 cut(s)	28, 335, 732, 1144, 1191
PspN4I	GGNNCC	7 cut(s)	11, 334, 372, 379, 604, 930, 1275
PspPI	GGNCC	5 cut(s)	10, 333, 355, 405, 1189
PspPPI	RGGWCCY	2 cut(s)	333, 405
PstI	CTGCAG	4 cut(s)	596, 1117, 1381, 1887
PstNI	CAGNNNCTG	1 cut(s)	1357
PsuI	RGATCY	1 cut(s)	1160
PvuII	CAGCTG	1 cut(s)	1368
RsaI	GTAC	4 cut(s)	266, 293, 536, 709
RsaNI	GTAC	4 cut(s)	265, 292, 535, 708
RseI	CAYNNNNRTG	2 cut(s)	984, 1323
SacII	CCGCGG	1 cut(s)	927
SapI	GCTCTTC	2 cut(s)	765, 870
SaqAI	TTAA	6 cut(s)	423, 654, 741, 855, 1476, 1713
SatI	GCNGC	7 cut(s)	62, 182, 592, 927, 1113, 1314, 1369
Sau3AI	GATC	4 cut(s)	553, 808, 889, 1160
Sau96I	GGNCC	5 cut(s)	10, 333, 355, 405, 1189
SchI	GAGTC	3 cut(s)	92, 248, 1961
ScrFI	CCNGG	6 cut(s)	30, 337, 375, 734, 1146, 1193
SduI	GDGCHC	2 cut(s)	380, 605
SfaNI	GCATC	8 cut(s)	556, 647, 745, 949, 1403, 1657, 1828, 1903
SfcI	CTRYAG	6 cut(s)	321, 592, 1113, 1377, 1785, 1883
SfoI	GGCGCC	1 cut(s)	372
Sfr303I	CCGCGG	1 cut(s)	927
SgrBI	CCGCGG	1 cut(s)	927
SinI	GGWCC	3 cut(s)	333, 355, 405
SmiMI	CAYNNNNRTG	2 cut(s)	984, 1323
SpeI	ACTAGT	1 cut(s)	1075
SsiI	CCGC	7 cut(s)	278, 924, 926, 1215, 1286, 1313, 1628
SspDI	GGCGCC	1 cut(s)	370
SspI	AATATT	2 cut(s)	1051, 1927
SspMI	CTAG	4 cut(s)	1076, 1400, 1487, 1577
StyD4I	CCNGG	6 cut(s)	28, 335, 373, 732, 1144, 1191
StyI	CCWWGG	1 cut(s)	793
TaaI	ACNGT	1 cut(s)	22
TaiI	ACGT	1 cut(s)	430
TaqI	TCGA	2 cut(s)	129, 824
TaqII	GACCGA	1 cut(s)	372
TatI	WGTACW	1 cut(s)	534
TauI	GCSGC	2 cut(s)	929, 1316
Tru1I	TTAA	6 cut(s)	423, 654, 741, 855, 1476, 1713
Tru9I	TTAA	6 cut(s)	423, 654, 741, 855, 1476, 1713
TscAI	CASTG	4 cut(s)	55, 1267, 1386, 1887
TseFI	GTSAC	7 cut(s)	68, 343, 954, 1067, 1196, 1556, 1632
TseI	GCWGC	5 cut(s)	61, 181, 591, 1112, 1368
Tsp45I	GTSAC	7 cut(s)	68, 343, 954, 1067, 1196, 1556, 1632
TspRI	CASTG	4 cut(s)	55, 1267, 1386, 1887
Van91I	CCANNNNNTGG	1 cut(s)	1907
VpaK11BI	GGWCC	3 cut(s)	333, 355, 405
VspI	ATTAAT	2 cut(s)	855, 1476
XapI	RAATTY	3 cut(s)	490, 631, 1305
XbaI	TCTAGA	2 cut(s)	1486, 1576
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1837
XmiI	GTMKAC	1 cut(s)	965
XmnI	GAANNNNTTC	4 cut(s)	203, 856, 1335, 1413
XspI	CTAG	4 cut(s)	1076, 1400, 1487, 1577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.