Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Forward (+)

20657749 .. 20661632

Gene Structure 3884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g18180.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

ATGCACATTATCGATCGTAATCGATGTAACTGGTTGAGAGACAAGATTGAGACTCCAACGCCAATGCAGTACAATAGGCAACGTCGTGAGGTTATTCTTGATAGACTTATGTGGAGTACACAGTTTGAGAACTTCTTGGCCACTAAGTGGAAAGCAGCTAAGAGGTTCGGGCTTGAAGGTGGAGAAACTCTTATTCCCGGCATGAAGGAGATGTTTGACAGGGCTGCTGATCTCGGGGTTGAGAGCATAGTTATTGGAATGCCTCACAGAGGGAGACTGAATGTATTGGGTAATGTGGTGCGGAAGCCTTTGCGTCAGATATTTAATGAATTCAGTGGTGGTACAAAGCCTGTGGATGAAGATGGGCTATACACTGGGACTGGTGATGTCAAGTATCACTTGGGAACATCTTATGATAGACCCACTAGAGGTGGCAAGAGACTTCATTTATCTTTGGTTGCAAATCCAAGTCACTTGGAAGCTGTGGACCCTGTCGTTGTCGGAAAAACTAGAGCAAAGCAGTTTTATTCAAATGACGCGGACAGGACCAAGAATATGGCTGTCTTGATTCATGGAGATGGCAGCTTTGCTGGACAAGGTGTGGTGTACGAGACTCTGCATCTAAGCGCTCTTCCTAACTACACCACTGGTGGGACTATACACATTGTGGTGAATAACCAAGTTGCCTTCACAACTGACCCAATGTCTGGAAGATCTTCGGAGTATTGTACAGATGTCGCCAAAGCATTGAATGCTCCTATTTTCCATGTAAATGCTGATGACATGGAGGCAGTTGCTCATGTCTGCGAGCTTGCCGCTGAATGGCGCCAGACATTCCATTCTGATGTTGTGGTTGATTTAGTGTGCTATCGTCGATTTGGGCATAATGAGATGGATGAACCATCTTTCACGCAGCCGAAAATGTACAAGGTTATTCGAAATCATCCCCCAGCTCTGACAATCTACCAGAACAAACTTCTAGAATCTGCACAAGTGACCAAAGAAGACATTGAAAGGATACAAAACAAGGTTAATTCAATTCTCAATGAAGAATTGTTGGCTAGCAAGGATTATGTTCCTAAAAAAAGAGACTGGCTTGCGTCCCATTGGTCTGGATTTAAGTCACCTGAACAAATTTCTCGTATCCGGAATACTGGGGTAAAACCAGAGATTTTGAAGACTGTTGGCAAATCAGTCACAGCCCTTCCAGAAACTTTTAAGGCTCACAAAGGAGTGAAAAAGGTCTATGAACACCGCGCACAAATGATTGAGACTGGTGAAGGAATTGATTGGGCAGTTGCAGAAGCACTTGCCTTTGCTACATTAATTGTAGAAGGTAACCATATTCGACTGAGTGGTCAAGATGTTGAAAGAGGTACATTTAGTCATCGTCATTCTGTAGTTCACGACCAGGAAACTGGAGAAAAGTATTGCCCTCTTGACAATATTATGGCGGACCAAGATGAGGAACTGTTTACAGTTAGCAACAGTTCACTCTCGGAGTTTGGTGTTCTTGGATTTGAATTGGGTTACTCGATGGAAAGTCCAAACTCATTAGTAATCTGGGAAGCTCAGTTTGGTGATTTTTCAAATGGAGCTCAAGTTATATTTGACCAGTTTTTGAGTGGTGGGGAGTCCAAGTGGCTTCGTCAAACCGGGCTTGTTGTGTTGCTTCCTCATGGTTACATGGGCCAGGGCCCTGAACATTCTAGTGCACGACTGGAACGATTTCTTCAGATGAGTGATGACAATCCCTTTGTCATACCTGAGATGGATTCCACACATCGGAAGCAAATTCAGGAATGCAATTGGCAGGTTGTGAATTTGACAACTCCTGCAAACTACTTCCATGTTCTGCGTCGTCAGATACACAGGGAATTCCGCAAGCCTCTTATTGTGATGGCTCCTAAAAACCTTCTACGGCACAAGGACTGCAAATCAAATTTATCCGAGTTCGATGATGTGCAAGGCCATCCAGGCTTTGACAAGCAGGGGACCAGATTTAAGCGCCTCATCAAGGACCAGAATCACCACTCTGATCTTGAGGAGGGTATTAGACGGTTGGTTCTATGCTCCGGCAAGCTTTATTATGAACTTGATGGAGAGCGAAGAAAGGTTAGAGCAAAGGATGTTGCAATTTGTAGAGTGGAACAGCTTTGCCCCTTCCCTTACGACCTCATCCAGCGAGAGCTGAAGCGATATCCAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

737

Amino Acids

83.75

Weight (kDa)

7.01

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1356
Acc36I	ACCTGC	1 cut(s)	1804
AccB1I	GGYRCC	1 cut(s)	825
AccB7I	CCANNNNNTGG	2 cut(s)	147, 707
AccII	CGCG	2 cut(s)	539, 1257
AccIII	TCCGGA	1 cut(s)	1146
AciI	CCGC	6 cut(s)	301, 539, 816, 1255, 1454, 1882
AcoI	YGGCCR	1 cut(s)	138
AcsI	RAATTY	6 cut(s)	329, 1134, 1794, 1822, 1877, 1942
AcuI	CTGAAG	1 cut(s)	1718
AcyI	GRCGYC	1 cut(s)	826
AdeI	CACNNNGTG	2 cut(s)	147, 667
AfaI	GTAC	7 cut(s)	71, 118, 343, 608, 730, 926, 1378
AfeI	AGCGCT	1 cut(s)	628
AfiI	CCNNNNNNNGG	9 cut(s)	147, 269, 428, 651, 707, 822, 1465, 1785, 2017
AgsI	TTSAA	9 cut(s)	176, 531, 751, 1013, 1038, 1177, 1370, 1523, 1590
AhdI	GACNNNNNGTC	1 cut(s)	703
AjnI	CCWGG	3 cut(s)	1410, 1692, 1975
AjuI	GAANNNNNNNTTGG	2 cut(s)	1560, 1592
Alw21I	GWGCWC	2 cut(s)	1600, 1717
Alw26I	GTCTC	7 cut(s)	33, 44, 268, 433, 605, 1083, 1265
Alw44I	GTGCAC	1 cut(s)	1713
Ama87I	CYCGRG	1 cut(s)	233
Aor13HI	TCCGGA	1 cut(s)	1146
Aor51HI	AGCGCT	1 cut(s)	628
AoxI	GGCC	4 cut(s)	138, 1690, 1696, 1969
ApaI	GGGCCC	1 cut(s)	1700
ApaLI	GTGCAC	1 cut(s)	1713
ApeKI	GCWGC	4 cut(s)	155, 224, 582, 913
ApoI	RAATTY	6 cut(s)	329, 1134, 1794, 1822, 1877, 1942
ArsI	GACNNNNNNTTYG	2 cut(s)	1739, 1771
AseI	ATTAAT	1 cut(s)	1325
Asp700I	GAANNNNTTC	2 cut(s)	715, 1728
AspLEI	GCGC	4 cut(s)	629, 828, 1259, 2010
AspS9I	GGNCC	8 cut(s)	487, 546, 1456, 1690, 1696, 1697, 1995, 2020
AsuC2I	CCSGG	2 cut(s)	198, 1657
AsuHPI	GGTGA	6 cut(s)	395, 682, 1116, 1289, 1592, 2021
AsuII	TTCGAA	1 cut(s)	937
AsuNHI	GCTAGC	1 cut(s)	1061
AvaI	CYCGRG	1 cut(s)	233
AvaII	GGWCC	5 cut(s)	487, 546, 1456, 1995, 2020
BaeGI	GKGCMC	2 cut(s)	1700, 1717
BalI	TGGCCA	1 cut(s)	140
BanI	GGYRCC	1 cut(s)	825
BanII	GRGCYC	2 cut(s)	1600, 1700
BbsI	GAAGAC	2 cut(s)	1011, 1184
Bbv12I	GWGCWC	2 cut(s)	1600, 1717
BbvI	GCAGC	4 cut(s)	167, 211, 594, 925
BccI	CCATC	9 cut(s)	356, 572, 886, 910, 1531, 1765, 1894, 1980, 2093
BceAI	ACGGC	1 cut(s)	1937
BciT130I	CCWGG	3 cut(s)	1412, 1694, 1977
BciVI	GTATCC	2 cut(s)	1011, 1154
BcnI	CCSGG	2 cut(s)	198, 1657
BcoDI	GTCTC	7 cut(s)	33, 44, 268, 433, 605, 1083, 1265
BfaI	CTAG	5 cut(s)	426, 510, 980, 1062, 1710
BfmI	CTRYAG	1 cut(s)	1398
BfoI	RGCGCY	3 cut(s)	630, 829, 2011
BfuAI	ACCTGC	1 cut(s)	1804
BfuI	GTATCC	2 cut(s)	1011, 1154
BglI	GCCNNNNNGGC	1 cut(s)	1977
BglII	AGATCT	1 cut(s)	713
BisI	GCNGC	5 cut(s)	156, 225, 583, 816, 914
BlsI	GCNGC	5 cut(s)	157, 226, 584, 817, 915
Bme1390I	CCNGG	5 cut(s)	198, 1412, 1657, 1694, 1977
Bme18I	GGWCC	5 cut(s)	487, 546, 1456, 1995, 2020
BmeRI	GACNNNNNGTC	1 cut(s)	703
BmeT110I	CYCGRG	1 cut(s)	233
BmgT120I	GGNCC	8 cut(s)	487, 546, 1456, 1690, 1696, 1697, 1995, 2020
BmiI	GGNNCC	5 cut(s)	489, 827, 1698, 1905, 1996
BmrFI	CCNGG	5 cut(s)	198, 1412, 1657, 1694, 1977
BmrI	ACTGGG	2 cut(s)	384, 1164
BmsI	GCATC	1 cut(s)	628
BmtI	GCTAGC	1 cut(s)	1065
BmuI	ACTGGG	2 cut(s)	384, 1164
BpiI	GAAGAC	2 cut(s)	1011, 1184
BpmI	CTGGAG	1 cut(s)	1440
Bpu14I	TTCGAA	1 cut(s)	937
BpuEI	CTTGAG	2 cut(s)	1584, 2063
BpuMI	CCSGG	2 cut(s)	198, 1657
Bsa29I	ATCGAT	2 cut(s)	12, 22
BsaBI	GATNNNNATC	2 cut(s)	18, 1749
BsaHI	GRCGYC	1 cut(s)	826
BsaJI	CCNNGG	1 cut(s)	1693
BsaWI	WCCGGW	1 cut(s)	1146
BsaXI	ACNNNNNCTCC	4 cut(s)	1587, 1617, 1625, 1655
Bsc4I	CCNNNNNNNGG	9 cut(s)	147, 269, 428, 651, 707, 822, 1465, 1785, 2017
Bse8I	GATNNNNATC	2 cut(s)	18, 1749
BseAI	TCCGGA	1 cut(s)	1146
BseBI	CCWGG	3 cut(s)	1412, 1694, 1977
BseCI	ATCGAT	2 cut(s)	12, 22
BseDI	CCNNGG	1 cut(s)	1693
BseGI	GGATG	6 cut(s)	361, 901, 943, 1972, 2134, 2178
BseJI	GATNNNNATC	2 cut(s)	18, 1749
BseLI	CCNNNNNNNGG	9 cut(s)	147, 269, 428, 651, 707, 822, 1465, 1785, 2017
BseMII	CTCAG	3 cut(s)	1343, 1586, 1758
BseRI	GAGGAG	1 cut(s)	2060
BseSI	GKGCMC	2 cut(s)	1700, 1717
BseXI	GCAGC	4 cut(s)	167, 211, 594, 925
BseYI	CCCAGC	1 cut(s)	949
BsgI	GTGCAG	1 cut(s)	972
Bsh1236I	CGCG	2 cut(s)	539, 1257
Bsh1285I	CGRYCG	1 cut(s)	16
BshFI	GGCC	4 cut(s)	140, 1692, 1698, 1971
BshNI	GGYRCC	1 cut(s)	825
BshVI	ATCGAT	2 cut(s)	12, 22
BsiEI	CGRYCG	1 cut(s)	16
BsiHKAI	GWGCWC	2 cut(s)	1600, 1717
BsiHKCI	CYCGRG	1 cut(s)	233
BsiSI	CCGG	4 cut(s)	198, 1147, 1656, 2076
BslFI	GGGAC	4 cut(s)	391, 667, 1087, 2008
BslI	CCNNNNNNNGG	9 cut(s)	147, 269, 428, 651, 707, 822, 1465, 1785, 2017
BsmAI	GTCTC	7 cut(s)	33, 44, 268, 433, 605, 1083, 1265
BsmFI	GGGAC	4 cut(s)	391, 667, 1087, 2008
BsmI	GAATGC	3 cut(s)	264, 757, 1808
BsnI	GGCC	4 cut(s)	140, 1692, 1698, 1971
BsoBI	CYCGRG	1 cut(s)	233
Bsp119I	TTCGAA	1 cut(s)	937
Bsp120I	GGGCCC	1 cut(s)	1696
Bsp1286I	GDGCHC	3 cut(s)	1600, 1700, 1717
Bsp13I	TCCGGA	1 cut(s)	1146
Bsp1407I	TGTACA	2 cut(s)	728, 924
Bsp143I	GATC	4 cut(s)	13, 229, 713, 2038
BspACI	CCGC	6 cut(s)	301, 539, 816, 1255, 1454, 1882
BspANI	GGCC	4 cut(s)	140, 1692, 1698, 1971
BspCNI	CTCAG	3 cut(s)	1344, 1585, 1759
BspDI	ATCGAT	2 cut(s)	12, 22
BspEI	TCCGGA	1 cut(s)	1146
BspFNI	CGCG	2 cut(s)	539, 1257
BspLI	GGNNCC	5 cut(s)	489, 827, 1698, 1905, 1996
BspMI	ACCTGC	1 cut(s)	1804
BspOI	GCTAGC	1 cut(s)	1065
BspQI	GCTCTTC	1 cut(s)	636
BspT104I	TTCGAA	1 cut(s)	937
BspT107I	GGYRCC	1 cut(s)	825
BsrGI	TGTACA	2 cut(s)	728, 924
BssECI	CCNNGG	1 cut(s)	1693
BssMI	GATC	4 cut(s)	13, 229, 713, 2038
BssNI	GRCGYC	1 cut(s)	826
Bst2UI	CCWGG	3 cut(s)	1412, 1694, 1977
Bst4CI	ACNGT	6 cut(s)	123, 1183, 1473, 1480, 1490, 2061
Bst6I	CTCTTC	1 cut(s)	636
BstACI	GRCGYC	1 cut(s)	826
BstAPI	GCANNNNNTGC	1 cut(s)	752
BstAUI	TGTACA	2 cut(s)	728, 924
BstBI	TTCGAA	1 cut(s)	937
BstC8I	GCNNGC	6 cut(s)	809, 813, 1063, 1098, 1886, 2081
BstDEI	CTNAG	6 cut(s)	144, 159, 623, 1352, 1572, 1767
BstEII	GGTNACC	1 cut(s)	1337
BstENI	CCTNNNNNAGG	2 cut(s)	267, 2015
BstF5I	GGATG	6 cut(s)	361, 901, 943, 1972, 2134, 2178
BstFNI	CGCG	2 cut(s)	539, 1257
BstH2I	RGCGCY	3 cut(s)	630, 829, 2011
BstHHI	GCGC	4 cut(s)	629, 828, 1259, 2010
BstKTI	GATC	4 cut(s)	16, 232, 716, 2041
BstMAI	GTCTC	7 cut(s)	33, 44, 268, 433, 605, 1083, 1265
BstMBI	GATC	4 cut(s)	13, 229, 713, 2038
BstMCI	CGRYCG	1 cut(s)	16
BstMWI	GCNNNNNNNGC	2 cut(s)	752, 1977
BstNI	CCWGG	3 cut(s)	1412, 1694, 1977
BstPI	GGTNACC	1 cut(s)	1337
BstSCI	CCNGG	5 cut(s)	196, 1410, 1655, 1692, 1975
BstSFI	CTRYAG	1 cut(s)	1398
BstSLI	GKGCMC	2 cut(s)	1700, 1717
BstUI	CGCG	2 cut(s)	539, 1257
BstV1I	GCAGC	4 cut(s)	167, 211, 594, 925
BstV2I	GAAGAC	2 cut(s)	1011, 1184
BstX2I	RGATCY	1 cut(s)	713
BstXI	CCANNNNNNTGG	3 cut(s)	556, 1112, 1418
BstYI	RGATCY	1 cut(s)	713
Bsu15I	ATCGAT	2 cut(s)	12, 22
BsuI	GTATCC	2 cut(s)	1011, 1154
BsuRI	GGCC	4 cut(s)	140, 1692, 1698, 1971
BsuTUI	ATCGAT	2 cut(s)	12, 22
BtsCI	GGATG	6 cut(s)	361, 901, 943, 1972, 2134, 2178
BtsIMutI	CAGTG	3 cut(s)	340, 372, 645
BveI	ACCTGC	1 cut(s)	1804
Cac8I	GCNNGC	6 cut(s)	809, 813, 1063, 1098, 1886, 2081
CfoI	GCGC	4 cut(s)	629, 828, 1259, 2010
Cfr13I	GGNCC	8 cut(s)	487, 546, 1456, 1690, 1696, 1697, 1995, 2020
ClaI	ATCGAT	2 cut(s)	12, 22
CseI	GACGC	4 cut(s)	302, 545, 1089, 1847
Csp6I	GTAC	7 cut(s)	70, 117, 342, 607, 729, 925, 1377
CspCI	CAANNNNNGTGG	2 cut(s)	333, 368
CviAII	CATG	8 cut(s)	202, 572, 767, 784, 800, 1679, 1687, 1850
CviQI	GTAC	7 cut(s)	70, 117, 342, 607, 729, 925, 1377
DdeI	CTNAG	6 cut(s)	144, 159, 623, 1352, 1572, 1767
DinI	GGCGCC	1 cut(s)	827
DpnI	GATC	4 cut(s)	15, 231, 715, 2040
DpnII	GATC	4 cut(s)	13, 229, 713, 2038
DraIII	CACNNNGTG	2 cut(s)	147, 667
DrdI	GACNNNNNNGTC	1 cut(s)	1356
DriI	GACNNNNNGTC	1 cut(s)	703
DseDI	GACNNNNNNGTC	1 cut(s)	1356
EaeI	YGGCCR	1 cut(s)	138
Eam1104I	CTCTTC	1 cut(s)	636
Eam1105I	GACNNNNNGTC	1 cut(s)	703
EarI	CTCTTC	1 cut(s)	636
EciI	GGCGGA	1 cut(s)	1469
Ecl136II	GAGCTC	1 cut(s)	1598
Eco24I	GRGCYC	2 cut(s)	1600, 1700
Eco32I	GATATC	1 cut(s)	2201
Eco47I	GGWCC	5 cut(s)	487, 546, 1456, 1995, 2020
Eco47III	AGCGCT	1 cut(s)	628
Eco53kI	GAGCTC	1 cut(s)	1598
Eco57I	CTGAAG	1 cut(s)	1718
Eco88I	CYCGRG	1 cut(s)	233
Eco91I	GGTNACC	1 cut(s)	1337
EcoICRI	GAGCTC	1 cut(s)	1598
EcoNI	CCTNNNNNAGG	2 cut(s)	267, 2015
EcoO109I	RGGNCCY	2 cut(s)	1696, 1697
EcoO65I	GGTNACC	1 cut(s)	1337
EcoRI	GAATTC	2 cut(s)	329, 1877
EcoRII	CCWGG	3 cut(s)	1410, 1692, 1975
EcoRV	GATATC	1 cut(s)	2201
EcoT38I	GRGCYC	2 cut(s)	1600, 1700
EgeI	GGCGCC	1 cut(s)	827
EheI	GGCGCC	1 cut(s)	827
FaeI	CATG	8 cut(s)	205, 575, 770, 787, 803, 1682, 1690, 1853
FalI	AAGNNNNNCTT	2 cut(s)	383, 415
FaqI	GGGAC	4 cut(s)	391, 667, 1087, 2008
FatI	CATG	8 cut(s)	201, 571, 766, 783, 799, 1678, 1686, 1849
Fnu4HI	GCNGC	5 cut(s)	156, 225, 583, 816, 914
FokI	GGATG	6 cut(s)	368, 908, 930, 1959, 2141, 2165
FriOI	GRGCYC	2 cut(s)	1600, 1700
Fsp4HI	GCNGC	5 cut(s)	156, 225, 583, 816, 914
FspBI	CTAG	5 cut(s)	426, 510, 980, 1062, 1710
GlaI	GCGC	4 cut(s)	628, 827, 1258, 2009
GluI	GCNGC	5 cut(s)	156, 225, 583, 816, 914
GsaI	CCCAGC	1 cut(s)	953
GsuI	CTGGAG	1 cut(s)	1440
HaeII	RGCGCY	3 cut(s)	630, 829, 2011
HaeIII	GGCC	4 cut(s)	140, 1692, 1698, 1971
HapII	CCGG	4 cut(s)	198, 1147, 1656, 2076
HgaI	GACGC	4 cut(s)	302, 545, 1089, 1847
HhaI	GCGC	4 cut(s)	629, 828, 1259, 2010
Hin1I	GRCGYC	1 cut(s)	826
Hin1II	CATG	8 cut(s)	205, 575, 770, 787, 803, 1682, 1690, 1853
Hin6I	GCGC	4 cut(s)	627, 826, 1257, 2008
HinP1I	GCGC	4 cut(s)	627, 826, 1257, 2008
HindIII	AAGCTT	1 cut(s)	2081
HinfI	GANTC	7 cut(s)	52, 568, 613, 983, 1634, 1775, 2026
HpaII	CCGG	4 cut(s)	198, 1147, 1656, 2076
HphI	GGTGA	6 cut(s)	395, 682, 1116, 1289, 1592, 2021
Hpy166II	GTNNAC	7 cut(s)	119, 487, 607, 1405, 1476, 1493, 1715
Hpy8I	GTNNAC	7 cut(s)	119, 487, 607, 1405, 1476, 1493, 1715
Hpy99I	CGWCG	3 cut(s)	87, 876, 1863
HpyAV	CCTTC	8 cut(s)	170, 199, 697, 1214, 1274, 1328, 1925, 2173
HpyCH4III	ACNGT	6 cut(s)	123, 1183, 1473, 1480, 1490, 2061
HpyCH4IV	ACGT	1 cut(s)	82
HpyF10VI	GCNNNNNNNGC	2 cut(s)	752, 1977
HpyF3I	CTNAG	6 cut(s)	144, 159, 623, 1352, 1572, 1767
HpySE526I	ACGT	1 cut(s)	82
Hsp92I	GRCGYC	1 cut(s)	826
Hsp92II	CATG	8 cut(s)	205, 575, 770, 787, 803, 1682, 1690, 1853
HspAI	GCGC	4 cut(s)	627, 826, 1257, 2008
KasI	GGCGCC	1 cut(s)	825
Kpn2I	TCCGGA	1 cut(s)	1146
Kzo9I	GATC	4 cut(s)	13, 229, 713, 2038
LguI	GCTCTTC	1 cut(s)	636
LmnI	GCTCC	4 cut(s)	760, 1595, 1909, 2078
Lsp1109I	GCAGC	4 cut(s)	167, 211, 594, 925
LweI	GCATC	1 cut(s)	628
MaeI	CTAG	5 cut(s)	426, 510, 980, 1062, 1710
MaeII	ACGT	1 cut(s)	82
MaeIII	GTNAC	8 cut(s)	26, 470, 994, 1122, 1195, 1337, 1529, 1682
MalI	GATC	4 cut(s)	15, 231, 715, 2040
MboI	GATC	4 cut(s)	13, 229, 713, 2038
MboII	GAAGA	9 cut(s)	371, 623, 708, 723, 1016, 1061, 1189, 1724, 2121
MfeI	CAATTG	1 cut(s)	1807
MflI	RGATCY	1 cut(s)	713
MhlI	GDGCHC	3 cut(s)	1600, 1700, 1717
MlsI	TGGCCA	1 cut(s)	140
MluNI	TGGCCA	1 cut(s)	140
Mly113I	GGCGCC	1 cut(s)	826
MlyI	GAGTC	3 cut(s)	46, 607, 1643
MmeI	TCCRAC	2 cut(s)	80, 481
Mox20I	TGGCCA	1 cut(s)	140
MroI	TCCGGA	1 cut(s)	1146
MroXI	GAANNNNTTC	2 cut(s)	715, 1728
MscI	TGGCCA	1 cut(s)	140
MseI	TTAA	6 cut(s)	324, 1032, 1119, 1218, 1325, 2004
MslI	CAYNNNNRTG	5 cut(s)	576, 668, 771, 843, 1710
Msp20I	TGGCCA	1 cut(s)	140
MspA1I	CMGCKG	1 cut(s)	818
MspI	CCGG	4 cut(s)	198, 1147, 1656, 2076
MspR9I	CCNGG	5 cut(s)	198, 1412, 1657, 1694, 1977
MunI	CAATTG	1 cut(s)	1807
Mva1269I	GAATGC	3 cut(s)	264, 757, 1808
MvaI	CCWGG	3 cut(s)	1412, 1694, 1977
MvnI	CGCG	2 cut(s)	539, 1257
MwoI	GCNNNNNNNGC	2 cut(s)	752, 1977
NarI	GGCGCC	1 cut(s)	826
NciI	CCSGG	2 cut(s)	198, 1657
NdeII	GATC	4 cut(s)	13, 229, 713, 2038
NheI	GCTAGC	1 cut(s)	1061
NlaIII	CATG	8 cut(s)	205, 575, 770, 787, 803, 1682, 1690, 1853
NlaIV	GGNNCC	5 cut(s)	489, 827, 1698, 1905, 1996
NmuCI	GTSAC	4 cut(s)	470, 994, 1122, 1195
NspV	TTCGAA	1 cut(s)	937
PciSI	GCTCTTC	1 cut(s)	636
PcsI	WCGNNNNNNNCGW	1 cut(s)	1723
PctI	GAATGC	3 cut(s)	264, 757, 1808
PdmI	GAANNNNTTC	2 cut(s)	715, 1728
PfeI	GAWTC	4 cut(s)	568, 983, 1775, 2026
PflFI	GACNNNGTC	1 cut(s)	491
PflMI	CCANNNNNTGG	2 cut(s)	147, 707
PkrI	GCNGC	5 cut(s)	157, 226, 584, 817, 915
Ple19I	CGATCG	1 cut(s)	16
PleI	GAGTC	3 cut(s)	46, 607, 1642
PluTI	GGCGCC	1 cut(s)	829
PpsI	GAGTC	3 cut(s)	46, 607, 1642
PshBI	ATTAAT	1 cut(s)	1325
Psp124BI	GAGCTC	1 cut(s)	1600
Psp6I	CCWGG	3 cut(s)	1410, 1692, 1975
PspEI	GGTNACC	1 cut(s)	1337
PspFI	CCCAGC	1 cut(s)	949
PspGI	CCWGG	3 cut(s)	1410, 1692, 1975
PspN4I	GGNNCC	5 cut(s)	489, 827, 1698, 1905, 1996
PspOMI	GGGCCC	1 cut(s)	1696
PspPI	GGNCC	8 cut(s)	487, 546, 1456, 1690, 1696, 1697, 1995, 2020
PsuI	RGATCY	1 cut(s)	713
PsyI	GACNNNGTC	1 cut(s)	491
PvuI	CGATCG	1 cut(s)	16
RsaI	GTAC	7 cut(s)	71, 118, 343, 608, 730, 926, 1378
RsaNI	GTAC	7 cut(s)	70, 117, 342, 607, 729, 925, 1377
RseI	CAYNNNNRTG	5 cut(s)	576, 668, 771, 843, 1710
SacI	GAGCTC	1 cut(s)	1600
SapI	GCTCTTC	1 cut(s)	636
SaqAI	TTAA	6 cut(s)	324, 1032, 1119, 1218, 1325, 2004
SatI	GCNGC	5 cut(s)	156, 225, 583, 816, 914
Sau3AI	GATC	4 cut(s)	13, 229, 713, 2038
Sau96I	GGNCC	8 cut(s)	487, 546, 1456, 1690, 1696, 1697, 1995, 2020
SchI	GAGTC	3 cut(s)	46, 607, 1643
ScrFI	CCNGG	5 cut(s)	198, 1412, 1657, 1694, 1977
SduI	GDGCHC	3 cut(s)	1600, 1700, 1717
SfaNI	GCATC	1 cut(s)	628
SfcI	CTRYAG	1 cut(s)	1398
SfoI	GGCGCC	1 cut(s)	827
SfuI	TTCGAA	1 cut(s)	937
SinI	GGWCC	5 cut(s)	487, 546, 1456, 1995, 2020
SmiMI	CAYNNNNRTG	5 cut(s)	576, 668, 771, 843, 1710
SmlI	CTYRAG	2 cut(s)	1599, 2042
SmoI	CTYRAG	2 cut(s)	1599, 2042
SsiI	CCGC	6 cut(s)	301, 539, 816, 1255, 1454, 1882
SspDI	GGCGCC	1 cut(s)	825
SspI	AATATT	1 cut(s)	1447
SspMI	CTAG	5 cut(s)	426, 510, 980, 1062, 1710
SstI	GAGCTC	1 cut(s)	1600
StyD4I	CCNGG	5 cut(s)	196, 1410, 1655, 1692, 1975
TaaI	ACNGT	6 cut(s)	123, 1183, 1473, 1480, 1490, 2061
TaiI	ACGT	1 cut(s)	85
TaqI	TCGA	7 cut(s)	12, 22, 874, 937, 1348, 1535, 1956
TatI	WGTACW	4 cut(s)	69, 116, 728, 924
TauI	GCSGC	1 cut(s)	818
TfiI	GAWTC	4 cut(s)	568, 983, 1775, 2026
Tru1I	TTAA	6 cut(s)	324, 1032, 1119, 1218, 1325, 2004
Tru9I	TTAA	6 cut(s)	324, 1032, 1119, 1218, 1325, 2004
TscAI	CASTG	3 cut(s)	340, 379, 652
TseFI	GTSAC	4 cut(s)	470, 994, 1122, 1195
TseI	GCWGC	4 cut(s)	155, 224, 582, 913
Tsp45I	GTSAC	4 cut(s)	470, 994, 1122, 1195
TspDTI	ATGAA	9 cut(s)	218, 342, 372, 434, 560, 912, 1062, 1263, 2106
TspRI	CASTG	3 cut(s)	340, 379, 652
Tth111I	GACNNNGTC	1 cut(s)	491
Van91I	CCANNNNNTGG	2 cut(s)	147, 707
VneI	GTGCAC	1 cut(s)	1713
VpaK11BI	GGWCC	5 cut(s)	487, 546, 1456, 1995, 2020
VspI	ATTAAT	1 cut(s)	1325
XagI	CCTNNNNNAGG	2 cut(s)	267, 2015
XapI	RAATTY	6 cut(s)	329, 1134, 1794, 1822, 1877, 1942
XbaI	TCTAGA	1 cut(s)	979
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1622
XmnI	GAANNNNTTC	2 cut(s)	715, 1728
XspI	CTAG	5 cut(s)	426, 510, 980, 1062, 1710

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.