Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006406.1

Orthogroup ID

OG0001811

Physical Location & Seq

Genomic Coordinates Forward (+)

38421 .. 40763

Gene Structure 2343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006406.1_g000008.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

atgaggtgggttagagcagggtctagtgtggcaaagtttgccattaggagatcactatcgaataggcatgtagttcctttgcaaaatcgatacttgcaaaccacaatgtgcatgtattccaaggcaggggctgccccggttcctcggccggtgccgctttcgaagctgactgatagtttcttggatggaagcaatagtgtttatttagaggggcttcagagggcctgggaggctgatcccagcagtgttgatgaatcctgggataatttctttaggaattttgtggggcaggcctctacctcccctggagtttcggggcagaccattcaagagagtatgcgtttgttgttgcttgtgagggcttatcaggttacaggtcatatgaaagctaaattggatcctttggcattgcaggagaggaaagtcccagatgagttggaccctgcttcatatgggtttactgaggctgatcttgatagggagttctttttaggggtttggaggatagctgggtttctggctgagaatcgtccggtgcagacccttaggtccatattgacccggctagagcaggcttactgtgggagcattgggtatgagtatatgcacattgcggatcgtaacaaatgtaactggttgagagaaaagattgagactccaacaatgatgcaatacaatgggcagcgccgtgaggtttttcttgacaggcttatttggagtacacagtttgagaacttcttgcactctaagtggaaaacagcaaagaggtttgggctagaaggttgcgaaactctcattcctggcatgaaggagatgtttgatagggcagcggatcttggggttgagagcatagtcattggaatgcctcatagaggaagactgaatgtattgggtaatgtggtccgaaaacctttgcggcagatattcagtgaattcagtggtggtacaaagcctgtggatgaagatgggctgtactcagggactggtgatgtcaagtatcacttgggaacttcctatgatcgacccactagaggtgggaaaagacttcatctatctttggttgcaaatccaagtcacttggaagctgtggatccagttgttgttggaaaaacaagagcaaagcaattttattcaaatgatttggacaggaccaagaatatggcagttttgattcatggagatggtagctttgccggacaaggagtggtctacgagactctgcatcttagtgctcttcctaattacaccactggtgggactatacacattgtagtgaataaccaagttgccttcacaactgatccaatgtccggcagatcttcagagtattgcactgatgttgctaaagccttgaatgtccctattttccatgtaaatgctgatgacatggaggcagttgttcatgtctgtgagcttgcagctgagtggcgccagacattccattctgatgttgtagttgatttagtgtgttatcgtcgatttgggcataatgagttagatgagccatcatttacgcagcctaaaatgtaccaggttattaaaaatcatccgaaccctctaactatttacacaaacaaacttttagaatctggacaagtgaacgaagaagatattgagaggatacagagcaaggttaataagattctaaacgaagagttcttagctagcaaagattatgttcctcaaagaagggattggcttgcatctcattggactggattcaagtcacctgaacaactttctcgtatccggaacaccggggtaaaaccagagattttgaagaatgttggcaaagcaatcacatttttaccagaaaattttaaacctcatagagcagtaaagaaggtatatggagaacgtgcagaaatgattgagactggtgaaggtattgattgggcagttgcagaagcacttgcctttgctacactgcttgtagaaggtaaccatgttcgactgagtggtcaggatgttgagagaggtacgtttagtcatcggcattctgtacttcatgaccaggaaacaggggacaagtattgccctctggaccatgttatggcgaaccaagatgaggaattgtttacagttagcaacaggtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004591 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0005947 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0008150 GO:0008152 GO:0009060 GO:0009353 GO:0009987 GO:0015980 GO:0016491 GO:0016624 GO:0016903 GO:0016999 GO:0017144 GO:0019752 GO:0030062 GO:0031974 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045239 GO:0045240 GO:0045252 GO:0045333 GO:0055114 GO:0070013 GO:0071704 GO:0072350 GO:0098798 GO:1902494 GO:1990204 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00020 ko00310 ko00380 ko01100 ko01110 ko01120 ko01130 ko01200 map00020 map00310 map00380 map01100 map01110 map01120 map01130 map01200

Pfam Domains

Protein Families

2-oxogl_dehyd_N E1_dh OxoGdeHyase_C Transket_pyr

Protein Analysis

698

Amino Acids

78.9

Weight (kDa)

6.66

Isoelectric Point (pI)

37.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001811)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55410 AT3G55410 AT5G65750
fragaria_vesca	FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21770 FvH4_7g21851
malus_domestica	MD01G1122800.v1.1 MD02G1281300.v1.1 MD02G1281500.v1.1 MD07G1192300.v1.1
prunus_persica	Prupe.2G230300_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1 Prupe.2G230400_v2.0.a1
pyrus_communis	pycom01g14980 pycom02g24050 pycom07g18180
rosa_chinensis	RchiOBHm_Chr1g0365921 RchiOBHm_Chr1g0366031
rosa_laevigata	RLG00000027377 RLG00000027378
rosa_multiflora	Rmu_co8265029.1_g000001 Rmu_sc0004288.1_g000005 Rmu_sc0006406.1_g000008
rosa_roxburghii	Rroxscaffold_4G00290620 Rroxscaffold_4G00290640
rosa_rugosa	Rorug01G0325800 Rorug01G0325900 Rorug01G0326000 Rorug01G0326100 Rorug01G0326200 Rorug01G0326300 Rorug01G0326400
rosa_samantha	Rh1AG334500 Rh1AG334600 Rh1BG295400 Rh1BG295600 Rh1CG312100 Rh1CG312200 Rh1DG327700 Rh1DG328000
rosa_wichuraiana	Rw1G029690 Rw1G029720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	547, 1959
AccB1I	GGYRCC	2 cut(s)	151, 1428
AccB7I	CCANNNNNTGG	1 cut(s)	2053
AccI	GTMKAC	1 cut(s)	1209
AccIII	TCCGGA	1 cut(s)	1749
AciI	CCGC	4 cut(s)	155, 614, 830, 916
AclWI	GGATC	8 cut(s)	230, 392, 405, 624, 840, 1085, 1098, 1295
AcoI	YGGCCR	1 cut(s)	146
AcsI	RAATTY	3 cut(s)	277, 932, 1816
AcuI	CTGAAG	2 cut(s)	200, 1305
AcyI	GRCGYC	1 cut(s)	1429
AdeI	CACNNNGTG	1 cut(s)	108
AfaI	GTAC	6 cut(s)	721, 946, 974, 1529, 1981, 2004
AfiI	CCNNNNNNNGG	7 cut(s)	126, 872, 1031, 1254, 1310, 2053, 2068
AgsI	TTSAA	5 cut(s)	329, 1134, 1354, 1723, 1780
AjnI	CCWGG	6 cut(s)	224, 257, 304, 799, 1530, 2013
AjuI	GAANNNNNNNTTGG	2 cut(s)	377, 409
AluBI	AGCT	8 cut(s)	166, 389, 509, 1085, 1188, 1414, 1421, 1664
AluI	AGCT	8 cut(s)	166, 389, 509, 1085, 1188, 1414, 1421, 1664
Alw21I	GWGCWC	1 cut(s)	1234
Alw26I	GTCTC	3 cut(s)	647, 1208, 1868
AlwI	GGATC	8 cut(s)	230, 392, 405, 624, 840, 1085, 1098, 1295
AlwNI	CAGNNNCTG	2 cut(s)	131, 983
Aor13HI	TCCGGA	1 cut(s)	1749
AoxI	GGCC	3 cut(s)	146, 222, 291
ApeKI	GCWGC	5 cut(s)	131, 682, 827, 1418, 1516
ApoI	RAATTY	3 cut(s)	277, 932, 1816
AspLEI	GCGC	2 cut(s)	687, 1431
AspS9I	GGNCC	6 cut(s)	222, 439, 549, 901, 1149, 2044
AsuC2I	CCSGG	3 cut(s)	137, 562, 1759
AsuHPI	GGTGA	3 cut(s)	998, 1719, 1892
AsuII	TTCGAA	1 cut(s)	161
AsuNHI	GCTAGC	1 cut(s)	1664
AvaII	GGWCC	5 cut(s)	439, 549, 901, 1149, 2044
AxyI	CCTNAGG	1 cut(s)	545
BamHI	GGATCC	2 cut(s)	397, 1090
BanI	GGYRCC	2 cut(s)	151, 1428
BbsI	GAAGAC	1 cut(s)	883
Bbv12I	GWGCWC	1 cut(s)	1234
BbvI	GCAGC	5 cut(s)	118, 694, 839, 1430, 1528
BccI	CCATC	4 cut(s)	179, 959, 1175, 1513
BceAI	ACGGC	1 cut(s)	672
BciT130I	CCWGG	6 cut(s)	226, 259, 306, 801, 1532, 2015
BciVI	GTATCC	2 cut(s)	1614, 1757
BcnI	CCSGG	3 cut(s)	137, 562, 1759
BcoDI	GTCTC	3 cut(s)	647, 1208, 1868
BfaI	CTAG	5 cut(s)	24, 566, 776, 1029, 1665
BfoI	RGCGCY	2 cut(s)	688, 1432
BfuI	GTATCC	2 cut(s)	1614, 1757
BglI	GCCNNNNNGGC	1 cut(s)	230
BglII	AGATCT	1 cut(s)	1316
BisI	GCNGC	7 cut(s)	132, 155, 683, 828, 917, 1419, 1517
BlsI	GCNGC	7 cut(s)	133, 156, 684, 829, 918, 1420, 1518
Bme1390I	CCNGG	9 cut(s)	137, 226, 259, 306, 562, 801, 1532, 1759, 2015
Bme18I	GGWCC	5 cut(s)	439, 549, 901, 1149, 2044
BmgT120I	GGNCC	6 cut(s)	222, 439, 549, 901, 1149, 2044
BmiI	GGNNCC	6 cut(s)	141, 153, 399, 441, 1092, 1430
BmrFI	CCNGG	9 cut(s)	137, 226, 259, 306, 562, 801, 1532, 1759, 2015
BmsI	GCATC	3 cut(s)	657, 1231, 1712
BmtI	GCTAGC	1 cut(s)	1668
BpiI	GAAGAC	1 cut(s)	883
BpmI	CTGGAG	1 cut(s)	327
Bpu14I	TTCGAA	1 cut(s)	161
BpuMI	CCSGG	3 cut(s)	137, 562, 1759
Bsa29I	ATCGAT	1 cut(s)	88
BsaBI	GATNNNNATC	1 cut(s)	55
BsaHI	GRCGYC	1 cut(s)	1429
BsaJI	CCNNGG	7 cut(s)	120, 135, 143, 225, 258, 304, 1758
BsaWI	WCCGGW	2 cut(s)	532, 1749
Bsc4I	CCNNNNNNNGG	7 cut(s)	126, 872, 1031, 1254, 1310, 2053, 2068
Bse118I	RCCGGY	1 cut(s)	148
Bse1I	ACTGG	6 cut(s)	638, 988, 1094, 1255, 1720, 1882
Bse21I	CCTNAGG	1 cut(s)	545
Bse3DI	GCAATG	2 cut(s)	407, 609
Bse8I	GATNNNNATC	1 cut(s)	55
BseAI	TCCGGA	1 cut(s)	1749
BseBI	CCWGG	6 cut(s)	226, 259, 306, 801, 1532, 2015
BseCI	ATCGAT	1 cut(s)	88
BseDI	CCNNGG	7 cut(s)	120, 135, 143, 225, 258, 304, 1758
BseGI	GGATG	4 cut(s)	190, 964, 1546, 1972
BseJI	GATNNNNATC	1 cut(s)	55
BseLI	CCNNNNNNNGG	7 cut(s)	126, 872, 1031, 1254, 1310, 2053, 2068
BseMI	GCAATG	2 cut(s)	407, 609
BseMII	CTCAG	5 cut(s)	453, 513, 990, 1413, 1946
BseNI	ACTGG	6 cut(s)	638, 988, 1094, 1255, 1720, 1882
BseX3I	CGGCCG	1 cut(s)	146
BseXI	GCAGC	5 cut(s)	118, 694, 839, 1430, 1528
BseYI	CCCAGC	2 cut(s)	239, 509
BsgI	GTGCAG	2 cut(s)	557, 1881
Bsh1285I	CGRYCG	1 cut(s)	149
BshFI	GGCC	3 cut(s)	148, 224, 293
BshNI	GGYRCC	2 cut(s)	151, 1428
BshVI	ATCGAT	1 cut(s)	88
BsiEI	CGRYCG	1 cut(s)	149
BsiHKAI	GWGCWC	1 cut(s)	1234
BsiSI	CCGG	8 cut(s)	137, 149, 533, 562, 1194, 1311, 1750, 1758
BslFI	GGGAC	5 cut(s)	410, 994, 1270, 1343, 2039
BslI	CCNNNNNNNGG	7 cut(s)	126, 872, 1031, 1254, 1310, 2053, 2068
BsmAI	GTCTC	3 cut(s)	647, 1208, 1868
BsmFI	GGGAC	5 cut(s)	410, 994, 1270, 1343, 2039
BsmI	GAATGC	2 cut(s)	867, 1996
BsnI	GGCC	3 cut(s)	148, 224, 293
Bsp119I	TTCGAA	1 cut(s)	161
Bsp1286I	GDGCHC	1 cut(s)	1234
Bsp13I	TCCGGA	1 cut(s)	1749
BspACI	CCGC	4 cut(s)	155, 614, 830, 916
BspANI	GGCC	3 cut(s)	148, 224, 293
BspCNI	CTCAG	5 cut(s)	454, 514, 989, 1414, 1947
BspDI	ATCGAT	1 cut(s)	88
BspEI	TCCGGA	1 cut(s)	1749
BspHI	TCATGA	1 cut(s)	2008
BspLI	GGNNCC	6 cut(s)	141, 153, 399, 441, 1092, 1430
BspOI	GCTAGC	1 cut(s)	1668
BspPI	GGATC	8 cut(s)	230, 392, 405, 624, 840, 1085, 1098, 1295
BspQI	GCTCTTC	1 cut(s)	1239
BspT104I	TTCGAA	1 cut(s)	161
BspT107I	GGYRCC	2 cut(s)	151, 1428
BsrDI	GCAATG	2 cut(s)	407, 609
BsrFI	RCCGGY	1 cut(s)	148
BsrI	ACTGG	6 cut(s)	638, 988, 1094, 1255, 1720, 1882
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	7 cut(s)	120, 135, 143, 225, 258, 304, 1758
BssNI	GRCGYC	1 cut(s)	1429
BssT1I	CCWWGG	1 cut(s)	120
Bst2UI	CCWGG	6 cut(s)	226, 259, 306, 801, 1532, 2015
Bst4CI	ACNGT	3 cut(s)	581, 726, 2083
Bst6I	CTCTTC	2 cut(s)	1239, 1647
BstACI	GRCGYC	1 cut(s)	1429
BstAPI	GCANNNNNTGC	2 cut(s)	38, 131
BstBI	TTCGAA	1 cut(s)	161
BstC8I	GCNNGC	5 cut(s)	291, 573, 1416, 1666, 1701
BstDEI	CTNAG	9 cut(s)	462, 522, 545, 747, 976, 1226, 1422, 1660, 1955
BstEII	GGTNACC	1 cut(s)	1940
BstENI	CCTNNNNNAGG	1 cut(s)	870
BstF5I	GGATG	4 cut(s)	190, 964, 1546, 1972
BstH2I	RGCGCY	2 cut(s)	688, 1432
BstHHI	GCGC	2 cut(s)	687, 1431
BstMAI	GTCTC	3 cut(s)	647, 1208, 1868
BstMCI	CGRYCG	1 cut(s)	149
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 131, 154, 163, 230
BstNI	CCWGG	6 cut(s)	226, 259, 306, 801, 1532, 2015
BstNSI	RCATGY	2 cut(s)	71, 115
BstPI	GGTNACC	1 cut(s)	1940
BstSCI	CCNGG	9 cut(s)	135, 224, 257, 304, 560, 799, 1530, 1757, 2013
BstV1I	GCAGC	5 cut(s)	118, 694, 839, 1430, 1528
BstV2I	GAAGAC	1 cut(s)	883
BstX2I	RGATCY	4 cut(s)	397, 832, 1090, 1316
BstXI	CCANNNNNNTGG	1 cut(s)	1159
BstYI	RGATCY	4 cut(s)	397, 832, 1090, 1316
BstZI	CGGCCG	1 cut(s)	146
Bsu15I	ATCGAT	1 cut(s)	88
Bsu36I	CCTNAGG	1 cut(s)	545
BsuI	GTATCC	2 cut(s)	1614, 1757
BsuRI	GGCC	3 cut(s)	148, 224, 293
BsuTUI	ATCGAT	1 cut(s)	88
BtsCI	GGATG	4 cut(s)	190, 964, 1546, 1972
BtsI	GCAGTG	2 cut(s)	250, 1925
BtsIMutI	CAGTG	6 cut(s)	250, 934, 943, 1248, 1332, 1925
Cac8I	GCNNGC	5 cut(s)	291, 573, 1416, 1666, 1701
CaiI	CAGNNNCTG	2 cut(s)	131, 983
CciI	TCATGA	1 cut(s)	2008
CfoI	GCGC	2 cut(s)	687, 1431
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	6 cut(s)	222, 439, 549, 901, 1149, 2044
ClaI	ATCGAT	1 cut(s)	88
CsiI	ACCWGGT	1 cut(s)	1530
Csp6I	GTAC	6 cut(s)	720, 945, 973, 1528, 1980, 2003
CspCI	CAANNNNNGTGG	2 cut(s)	936, 971
CviQI	GTAC	6 cut(s)	720, 945, 973, 1528, 1980, 2003
DdeI	CTNAG	9 cut(s)	462, 522, 545, 747, 976, 1226, 1422, 1660, 1955
DinI	GGCGCC	1 cut(s)	1430
DraI	TTTAAA	1 cut(s)	1822
DraIII	CACNNNGTG	1 cut(s)	108
DrdI	GACNNNNNNGTC	2 cut(s)	547, 1959
DseDI	GACNNNNNNGTC	2 cut(s)	547, 1959
EaeI	YGGCCR	1 cut(s)	146
EagI	CGGCCG	1 cut(s)	146
Eam1104I	CTCTTC	2 cut(s)	1239, 1647
EarI	CTCTTC	2 cut(s)	1239, 1647
EclXI	CGGCCG	1 cut(s)	146
Eco130I	CCWWGG	1 cut(s)	120
Eco147I	AGGCCT	1 cut(s)	293
Eco47I	GGWCC	5 cut(s)	439, 549, 901, 1149, 2044
Eco52I	CGGCCG	1 cut(s)	146
Eco57I	CTGAAG	2 cut(s)	200, 1305
Eco81I	CCTNAGG	1 cut(s)	545
Eco91I	GGTNACC	1 cut(s)	1940
EcoNI	CCTNNNNNAGG	1 cut(s)	870
EcoO109I	RGGNCCY	1 cut(s)	222
EcoO65I	GGTNACC	1 cut(s)	1940
EcoRI	GAATTC	1 cut(s)	932
EcoRII	CCWGG	6 cut(s)	224, 257, 304, 799, 1530, 2013
EcoT14I	CCWWGG	1 cut(s)	120
EgeI	GGCGCC	1 cut(s)	1430
EheI	GGCGCC	1 cut(s)	1430
ErhI	CCWWGG	1 cut(s)	120
FalI	AAGNNNNNCTT	2 cut(s)	986, 1018
FaqI	GGGAC	5 cut(s)	410, 994, 1270, 1343, 2039
FauNDI	CATATG	2 cut(s)	381, 451
FblI	GTMKAC	1 cut(s)	1209
Fnu4HI	GCNGC	7 cut(s)	132, 155, 683, 828, 917, 1419, 1517
FokI	GGATG	4 cut(s)	197, 971, 1533, 1979
Fsp4HI	GCNGC	7 cut(s)	132, 155, 683, 828, 917, 1419, 1517
FspBI	CTAG	5 cut(s)	24, 566, 776, 1029, 1665
GlaI	GCGC	2 cut(s)	686, 1430
GluI	GCNGC	7 cut(s)	132, 155, 683, 828, 917, 1419, 1517
GsaI	CCCAGC	2 cut(s)	243, 513
GsuI	CTGGAG	1 cut(s)	327
HaeII	RGCGCY	2 cut(s)	688, 1432
HaeIII	GGCC	3 cut(s)	148, 224, 293
HapII	CCGG	8 cut(s)	137, 149, 533, 562, 1194, 1311, 1750, 1758
HhaI	GCGC	2 cut(s)	687, 1431
Hin1I	GRCGYC	1 cut(s)	1429
Hin6I	GCGC	2 cut(s)	685, 1429
HinP1I	GCGC	2 cut(s)	685, 1429
HinfI	GANTC	8 cut(s)	254, 526, 655, 1171, 1216, 1586, 1642, 1719
HpaII	CCGG	8 cut(s)	137, 149, 533, 562, 1194, 1311, 1750, 1758
HphI	GGTGA	3 cut(s)	998, 1719, 1892
Hpy166II	GTNNAC	5 cut(s)	459, 722, 1210, 1600, 2079
Hpy188I	TCNGA	5 cut(s)	219, 905, 1324, 1447, 1551
Hpy188III	TCNNGA	8 cut(s)	329, 473, 701, 1590, 1750, 1964, 2009, 2042
Hpy8I	GTNNAC	5 cut(s)	459, 722, 1210, 1600, 2079
Hpy99I	CGWCG	1 cut(s)	1479
HpyAV	CCTTC	7 cut(s)	773, 802, 1300, 1683, 1837, 1877, 1931
HpyCH4III	ACNGT	3 cut(s)	581, 726, 2083
HpyCH4IV	ACGT	2 cut(s)	1858, 1982
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 131, 154, 163, 230
HpyF3I	CTNAG	9 cut(s)	462, 522, 545, 747, 976, 1226, 1422, 1660, 1955
HpySE526I	ACGT	2 cut(s)	1858, 1982
Hsp92I	GRCGYC	1 cut(s)	1429
HspAI	GCGC	2 cut(s)	685, 1429
KasI	GGCGCC	1 cut(s)	1428
Kpn2I	TCCGGA	1 cut(s)	1749
LguI	GCTCTTC	1 cut(s)	1239
LmnI	GCTCC	1 cut(s)	585
Lsp1109I	GCAGC	5 cut(s)	118, 694, 839, 1430, 1528
LweI	GCATC	3 cut(s)	657, 1231, 1712
MabI	ACCWGGT	1 cut(s)	1530
MaeI	CTAG	5 cut(s)	24, 566, 776, 1029, 1665
MaeII	ACGT	2 cut(s)	1858, 1982
MaeIII	GTNAC	6 cut(s)	370, 620, 629, 1073, 1725, 1940
MboII	GAAGA	8 cut(s)	888, 974, 1226, 1311, 1616, 1619, 1664, 1792
MflI	RGATCY	4 cut(s)	397, 832, 1090, 1316
MhlI	GDGCHC	1 cut(s)	1234
MluCI	AATT	8 cut(s)	265, 277, 392, 932, 1124, 1240, 1816, 2072
Mly113I	GGCGCC	1 cut(s)	1429
MlyI	GAGTC	2 cut(s)	649, 1210
MmeI	TCCRAC	3 cut(s)	417, 683, 1084
MroI	TCCGGA	1 cut(s)	1749
MseI	TTAA	3 cut(s)	1539, 1635, 1821
MslI	CAYNNNNRTG	7 cut(s)	860, 1179, 1227, 1271, 1374, 1407, 1446
MspA1I	CMGCKG	2 cut(s)	830, 1421
MspI	CCGG	8 cut(s)	137, 149, 533, 562, 1194, 1311, 1750, 1758
MspR9I	CCNGG	9 cut(s)	137, 226, 259, 306, 562, 801, 1532, 1759, 2015
Mva1269I	GAATGC	2 cut(s)	867, 1996
MvaI	CCWGG	6 cut(s)	226, 259, 306, 801, 1532, 2015
MwoI	GCNNNNNNNGC	5 cut(s)	38, 131, 154, 163, 230
NarI	GGCGCC	1 cut(s)	1429
NciI	CCSGG	3 cut(s)	137, 562, 1759
NdeI	CATATG	2 cut(s)	381, 451
NheI	GCTAGC	1 cut(s)	1664
NlaIV	GGNNCC	6 cut(s)	141, 153, 399, 441, 1092, 1430
NmeAIII	GCCGAG	1 cut(s)	124
NmuCI	GTSAC	2 cut(s)	1073, 1725
NspI	RCATGY	2 cut(s)	71, 115
NspV	TTCGAA	1 cut(s)	161
PagI	TCATGA	1 cut(s)	2008
PceI	AGGCCT	1 cut(s)	293
PciSI	GCTCTTC	1 cut(s)	1239
PctI	GAATGC	2 cut(s)	867, 1996
PfeI	GAWTC	6 cut(s)	254, 526, 1171, 1586, 1642, 1719
PflMI	CCANNNNNTGG	1 cut(s)	2053
PkrI	GCNGC	7 cut(s)	133, 156, 684, 829, 918, 1420, 1518
PleI	GAGTC	2 cut(s)	649, 1210
PluTI	GGCGCC	1 cut(s)	1432
PpsI	GAGTC	2 cut(s)	649, 1210
Psp6I	CCWGG	6 cut(s)	224, 257, 304, 799, 1530, 2013
PspEI	GGTNACC	1 cut(s)	1940
PspFI	CCCAGC	2 cut(s)	239, 509
PspGI	CCWGG	6 cut(s)	224, 257, 304, 799, 1530, 2013
PspN4I	GGNNCC	6 cut(s)	141, 153, 399, 441, 1092, 1430
PspPI	GGNCC	6 cut(s)	222, 439, 549, 901, 1149, 2044
PstNI	CAGNNNCTG	2 cut(s)	131, 983
PsuI	RGATCY	4 cut(s)	397, 832, 1090, 1316
PvuII	CAGCTG	1 cut(s)	1421
RsaI	GTAC	6 cut(s)	721, 946, 974, 1529, 1981, 2004
RsaNI	GTAC	6 cut(s)	720, 945, 973, 1528, 1980, 2003
RseI	CAYNNNNRTG	7 cut(s)	860, 1179, 1227, 1271, 1374, 1407, 1446
SapI	GCTCTTC	1 cut(s)	1239
SaqAI	TTAA	3 cut(s)	1539, 1635, 1821
SatI	GCNGC	7 cut(s)	132, 155, 683, 828, 917, 1419, 1517
Sau96I	GGNCC	6 cut(s)	222, 439, 549, 901, 1149, 2044
SchI	GAGTC	2 cut(s)	649, 1210
ScrFI	CCNGG	9 cut(s)	137, 226, 259, 306, 562, 801, 1532, 1759, 2015
SduI	GDGCHC	1 cut(s)	1234
SexAI	ACCWGGT	1 cut(s)	1530
SfaNI	GCATC	3 cut(s)	657, 1231, 1712
SfoI	GGCGCC	1 cut(s)	1430
SfuI	TTCGAA	1 cut(s)	161
SinI	GGWCC	5 cut(s)	439, 549, 901, 1149, 2044
SmiMI	CAYNNNNRTG	7 cut(s)	860, 1179, 1227, 1271, 1374, 1407, 1446
Sse9I	AATT	8 cut(s)	265, 277, 392, 932, 1124, 1240, 1816, 2072
SseBI	AGGCCT	1 cut(s)	293
SsiI	CCGC	4 cut(s)	155, 614, 830, 916
SspDI	GGCGCC	1 cut(s)	1428
SspMI	CTAG	5 cut(s)	24, 566, 776, 1029, 1665
StuI	AGGCCT	1 cut(s)	293
StyD4I	CCNGG	9 cut(s)	135, 224, 257, 304, 560, 799, 1530, 1757, 2013
StyI	CCWWGG	1 cut(s)	120
TaaI	ACNGT	3 cut(s)	581, 726, 2083
TaiI	ACGT	2 cut(s)	1861, 1985
TaqI	TCGA	6 cut(s)	59, 88, 161, 1021, 1477, 1951
TasI	AATT	8 cut(s)	265, 277, 392, 932, 1124, 1240, 1816, 2072
TatI	WGTACW	3 cut(s)	719, 972, 2002
TauI	GCSGC	2 cut(s)	157, 919
TfiI	GAWTC	6 cut(s)	254, 526, 1171, 1586, 1642, 1719
Tru1I	TTAA	3 cut(s)	1539, 1635, 1821
Tru9I	TTAA	3 cut(s)	1539, 1635, 1821
TscAI	CASTG	6 cut(s)	250, 934, 943, 1255, 1339, 1932
TseFI	GTSAC	2 cut(s)	1073, 1725
TseI	GCWGC	5 cut(s)	131, 682, 827, 1418, 1516
Tsp45I	GTSAC	2 cut(s)	1073, 1725
TspDTI	ATGAA	9 cut(s)	267, 398, 438, 821, 975, 1037, 1163, 1391, 1997
TspRI	CASTG	6 cut(s)	250, 934, 943, 1255, 1339, 1932
Van91I	CCANNNNNTGG	1 cut(s)	2053
VpaK11BI	GGWCC	5 cut(s)	439, 549, 901, 1149, 2044
XagI	CCTNNNNNAGG	1 cut(s)	870
XapI	RAATTY	3 cut(s)	277, 932, 1816
XceI	RCATGY	2 cut(s)	71, 115
XmiI	GTMKAC	1 cut(s)	1209
XspI	CTAG	5 cut(s)	24, 566, 776, 1029, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.