FvH4_7g26670

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0002292
Physical Location & Seq
Forward (+)
20087696 .. 20089313
1618 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g26670.t1

Sequence Viewer

Length: 444 bp
ATGATCGATTTTGATGAGGAGGATTTCTCTCTTCAGCTTCTTTTCAAAGAGCAGGGAGGCAGGGACATGATGAGGACACGGGGCTCTCCTTGCTATTCACTTCTTTTCAAAGAAGAGCAGGGAGATGATTTCGGCCTCTTGTTCCTCTTCAAGGAGGAAGAGGAAATTGACAAGTCCTCTTCATCATGCTATCATGTTGCAAGGAGAGGAAGTGTAGATATTGTTCGAGAAATAGTCCTGGCTTGTCCAGAAAGTGTTGAAGATGTGACAGCACAAGGGGAAACTACTTTGCATCTTGTTGTTAAGAACAGTCAGTTTGGAGCTGTTGATGTTTTGGTGGAATTGGTCACAAAATTGAGGAAGGTGAACATCTTGAACTCGAAGGATAAGCATGGCCTCTACAACGGATCTCCAGCCATATTATGGCAGATGCTATATGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

148

Amino Acids

16.67

Weight (kDa)

4.79

Isoelectric Point (pI)

52.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 423
AclWI GGATC 1 cut(s) 415
AcuI CTGAAG 1 cut(s) 17
AfiI CCNNNNNNNGG 2 cut(s) 151, 423
AgsI TTSAA 5 cut(s) 46, 109, 151, 260, 376
AjnI CCWGG 1 cut(s) 237
AluBI AGCT 2 cut(s) 37, 323
AluI AGCT 2 cut(s) 37, 323
AlwI GGATC 1 cut(s) 415
AoxI GGCC 2 cut(s) 133, 394
AsuHPI GGTGA 1 cut(s) 376
BanII GRGCYC 1 cut(s) 86
BciT130I CCWGG 1 cut(s) 239
Bme1390I CCNGG 1 cut(s) 239
BmrFI CCNGG 1 cut(s) 239
BmsI GCATC 2 cut(s) 301, 420
BplI GAGNNNNNCTC 2 cut(s) 11, 43
BpmI CTGGAG 1 cut(s) 396
Bsa29I ATCGAT 1 cut(s) 6
BsaXI ACNNNNNCTCC 2 cut(s) 196, 226
Bsc4I CCNNNNNNNGG 2 cut(s) 151, 423
BseBI CCWGG 1 cut(s) 239
BseCI ATCGAT 1 cut(s) 6
BseLI CCNNNNNNNGG 2 cut(s) 151, 423
BseRI GAGGAG 1 cut(s) 32
BshFI GGCC 2 cut(s) 135, 396
BshVI ATCGAT 1 cut(s) 6
BslFI GGGAC 1 cut(s) 77
BslI CCNNNNNNNGG 2 cut(s) 151, 423
BsmFI GGGAC 1 cut(s) 77
BsnI GGCC 2 cut(s) 135, 396
Bsp1286I GDGCHC 1 cut(s) 86
Bsp143I GATC 2 cut(s) 3, 407
BspANI GGCC 2 cut(s) 135, 396
BspDI ATCGAT 1 cut(s) 6
BspPI GGATC 1 cut(s) 415
BspQI GCTCTTC 1 cut(s) 108
BssMI GATC 2 cut(s) 3, 407
Bst2UI CCWGG 1 cut(s) 239
Bst4CI ACNGT 1 cut(s) 311
Bst6I CTCTTC 5 cut(s) 36, 108, 152, 153, 184
BstENI CCTNNNNNAGG 1 cut(s) 149
BstKTI GATC 2 cut(s) 6, 410
BstMBI GATC 2 cut(s) 3, 407
BstMWI GCNNNNNNNGC 1 cut(s) 90
BstNI CCWGG 1 cut(s) 239
BstSCI CCNGG 1 cut(s) 237
BstX2I RGATCY 1 cut(s) 407
BstYI RGATCY 1 cut(s) 407
Bsu15I ATCGAT 1 cut(s) 6
BsuRI GGCC 2 cut(s) 135, 396
BsuTUI ATCGAT 1 cut(s) 6
ClaI ATCGAT 1 cut(s) 6
CviAII CATG 4 cut(s) 67, 186, 194, 392
CviJI RGCY 7 cut(s) 37, 84, 135, 242, 323, 396, 416
CviKI_1 RGCY 7 cut(s) 37, 84, 135, 242, 323, 396, 416
DpnI GATC 2 cut(s) 5, 409
DpnII GATC 2 cut(s) 3, 407
Eam1104I CTCTTC 5 cut(s) 36, 108, 152, 153, 184
EarI CTCTTC 5 cut(s) 36, 108, 152, 153, 184
Eco24I GRGCYC 1 cut(s) 86
Eco57I CTGAAG 1 cut(s) 17
EcoNI CCTNNNNNAGG 1 cut(s) 149
EcoRII CCWGG 1 cut(s) 237
EcoT22I ATGCAT 1 cut(s) 442
EcoT38I GRGCYC 1 cut(s) 86
FaeI CATG 4 cut(s) 70, 189, 197, 395
FaiI YATR 9 cut(s) 68, 187, 195, 393, 419, 424, 436, 438, 442
FaqI GGGAC 1 cut(s) 77
FatI CATG 4 cut(s) 66, 185, 193, 391
FriOI GRGCYC 1 cut(s) 86
GsuI CTGGAG 1 cut(s) 396
HaeIII GGCC 2 cut(s) 135, 396
Hin1II CATG 4 cut(s) 70, 189, 197, 395
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 1 cut(s) 367
Hpy188III TCNNGA 3 cut(s) 227, 248, 373
Hpy8I GTNNAC 1 cut(s) 367
HpyAV CCTTC 2 cut(s) 355, 376
HpyCH4III ACNGT 1 cut(s) 311
HpyCH4V TGCA 3 cut(s) 200, 292, 440
HpyF10VI GCNNNNNNNGC 1 cut(s) 90
Hsp92II CATG 4 cut(s) 70, 189, 197, 395
Kzo9I GATC 2 cut(s) 3, 407
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 1 cut(s) 320
LpnPI CCDG 7 cut(s) 38, 46, 104, 224, 251, 261, 426
LweI GCATC 2 cut(s) 301, 420
MaeIII GTNAC 2 cut(s) 265, 346
MalI GATC 2 cut(s) 5, 409
MboI GATC 2 cut(s) 3, 407
MboII GAAGA 6 cut(s) 23, 125, 139, 170, 171, 272
MflI RGATCY 1 cut(s) 407
MhlI GDGCHC 1 cut(s) 86
MluCI AATT 3 cut(s) 165, 341, 353
Mph1103I ATGCAT 1 cut(s) 442
MseI TTAA 1 cut(s) 303
MspR9I CCNGG 1 cut(s) 239
MvaI CCWGG 1 cut(s) 239
MwoI GCNNNNNNNGC 1 cut(s) 90
NdeII GATC 2 cut(s) 3, 407
NlaIII CATG 4 cut(s) 70, 189, 197, 395
NmuCI GTSAC 2 cut(s) 265, 346
NsiI ATGCAT 1 cut(s) 442
PciSI GCTCTTC 1 cut(s) 108
PflMI CCANNNNNTGG 1 cut(s) 423
Psp6I CCWGG 1 cut(s) 237
PspGI CCWGG 1 cut(s) 237
PsrI GAACNNNNNNTAC 2 cut(s) 207, 239
PsuI RGATCY 1 cut(s) 407
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 1 cut(s) 303
Sau3AI GATC 2 cut(s) 3, 407
ScrFI CCNGG 1 cut(s) 239
SduI GDGCHC 1 cut(s) 86
SetI ASST 3 cut(s) 39, 325, 366
SfaNI GCATC 2 cut(s) 301, 420
Sse9I AATT 3 cut(s) 165, 341, 353
StyD4I CCNGG 1 cut(s) 237
TaaI ACNGT 1 cut(s) 311
TaqI TCGA 3 cut(s) 6, 226, 380
TasI AATT 3 cut(s) 165, 341, 353
Tru1I TTAA 1 cut(s) 303
Tru9I TTAA 1 cut(s) 303
TseFI GTSAC 2 cut(s) 265, 346
Tsp45I GTSAC 2 cut(s) 265, 346
TspDTI ATGAA 1 cut(s) 171
TspGWI ACGGA 1 cut(s) 420
Van91I CCANNNNNTGG 1 cut(s) 423
XagI CCTNNNNNAGG 1 cut(s) 149
XcmI CCANNNNNNNNNTGG 1 cut(s) 420
Zsp2I ATGCAT 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.