Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002292

Physical Location & Seq

Genomic Coordinates Forward (+)

27475517 .. 27478662

Gene Structure 3146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G270500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGGTTTTAACTTGCACAAAAAGTGTTGAAGATGTAACCGTACAAGGGGAGACTAGTTTGCACCTTGCTGTTAAGCGCAGCCAGTTTGAAGCAATTAAAGCGTTGGTGGAGTTGGTCAGAGAAATGAACAAGGTGAACATCCTGAATATGAAGGATAATAATGGCAATTCAGTTCTTCATCTAGCAGGCTGGAAAAAAAAACAACACCAGAACAGGAGAGATATCCAACTCCTGCACCAGTTTCTGGCGGAGAATCCCCTTCTACTCCATACTCTTGCGCTAGCTTCTGCCAAGAACCCCTTACATGTTGCTTCCATTGCTGGCCATGTTGACTTTGTTAAGGAGATTGTGAGGATCAAGCCAGATTTTGCCAAAGAAATGAGCAATGATGGTTTTAGCCCCATCCATATTGCATCTGCCAAAGGATATTTGGAGATCGTAAGGGAGCTGCTGAAAGTTGACCCAAGACTTTCTCAGCTGAAAGGAAGGGATGAATGGACTCCTCTTCATTATGCTGCTAGCAGAGGGAGAGTAGATGTAATTAGAGAAATGGCTTTGTCTTGTCAAGAAAGTGTTGCAGATGTGACCATACAAGGGGAGACTGCTTTGAACCTTGCTGTGGTGGAATGGTTGGTTGGAAATGGAAATATTGCAGGTGCCTTGGAAGTAAATAATGTAAACCATAGTGGTCTGACACCTCTGGATCTGCTACTGATCTTCCCAAGTGAAGCCAGTGATAGGGAAATGGAGGCGATCCTTCGTGGCACTGGAGCTATGAGAGCAGGAGACATAGTACACTCTGGTGTTCCAAGCCATAACCATCCCCATGCCCCCATGGAATCAGACACCAATCCATTGCAGCAACCAGATAATCTGGTGGAGTTCTTCAAGTTCAAAAAGGGAAGAGATTCTCCAAGTGACGCACGTGACGCACTATTAGTTGTAGCTGTCCTAGTAGCTACCACAACCTATCAAGTTGCAGCAAACCCTCCAGGCGGGGTATGGCAGGATGCTGTTTTAAACAAAAACGGGACAACTTCCAACACAAGCAATGCTTCAACACACTATGCAGGGACAGACATCCTAGGTTCTTACTATCCGGCTTACTTCATTGTGTTTGCAGTTTTCAACTCCATCGGATTTTCGATGTCTCTTCACATGATCAAAATTCTCACGACCAATTTCCCTCTGCAGCTGGAGCACCAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

402

Amino Acids

44.14

Weight (kDa)

6.27

Isoelectric Point (pI)

29.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002292)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G51160
fragaria_vesca	FvH4_7g26641 FvH4_7g26643 FvH4_7g26670
malus_domestica	MD01G1175400.v1.1 MD07G1241300.v1.1 MD07G1241500.v1.1 MD12G1230800.v1.1 MD12G1230900.v1.1 MD12G1231100.v1.1 MD12G1231200.v1.1
prunus_persica	Prupe.2G270400_v2.0.a1 Prupe.2G270500_v2.0.a1
pyrus_communis	pycom07g21780 pycom07g21790 pycom07g21800 pycom07g21860 pycom07g21970 pycom12g21410
rosa_chinensis	RchiOBHm_Chr1g0373271 RchiOBHm_Chr1g0373281
rosa_laevigata	RLG00000026830 RLG00000026831 RLG00000026832
rosa_multiflora	Rmu_co8287043.1_g000001 Rmu_sc0000170.1_g000005 Rmu_ssc0000435.1_g000001 Rmu_ssc0000435.1_g000002
rosa_rugosa	Rorug01G0376800 Rorug01G0376800
rosa_samantha	Rh1AG385600 Rh1AG385700 Rh1BG349800 Rh1BG349900 Rh1CG363000 Rh1CG363100 Rh1DG380500 Rh1DG380600 Rh1DG380700 Rh7DG228200
rosa_wichuraiana	Rw1G034920 Rw1G034930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	644
Acc36I	ACCTGC	1 cut(s)	644
AccB1I	GGYRCC	1 cut(s)	656
AccB7I	CCANNNNNTGG	1 cut(s)	244
AciI	CCGC	2 cut(s)	248, 996
AclWI	GGATC	3 cut(s)	362, 711, 748
AcoI	YGGCCR	1 cut(s)	322
AcsI	RAATTY	1 cut(s)	1167
AcvI	CACGTG	1 cut(s)	926
AfaI	GTAC	2 cut(s)	42, 795
AfiI	CCNNNNNNNGG	6 cut(s)	45, 244, 594, 619, 738, 995
AflIII	ACRYGT	1 cut(s)	304
AgsI	TTSAA	7 cut(s)	29, 89, 610, 889, 895, 1059, 1129
AhlI	ACTAGT	1 cut(s)	53
AjnI	CCWGG	1 cut(s)	991
AjuI	GAANNNNNNNTTGG	2 cut(s)	618, 650
AleI	CACNNNNGTG	1 cut(s)	801
AluBI	AGCT	7 cut(s)	284, 448, 478, 773, 947, 959, 1195
AluI	AGCT	7 cut(s)	284, 448, 478, 773, 947, 959, 1195
Alw21I	GWGCWC	1 cut(s)	1203
Alw26I	GTCTC	4 cut(s)	44, 593, 780, 1155
AlwI	GGATC	3 cut(s)	362, 711, 748
AlwNI	CAGNNNCTG	1 cut(s)	244
AoxI	GGCC	1 cut(s)	322
ApeKI	GCWGC	6 cut(s)	78, 448, 515, 859, 980, 1192
ApoI	RAATTY	1 cut(s)	1167
Asp700I	GAANNNNTTC	1 cut(s)	907
AspA2I	CCTAGG	1 cut(s)	1084
AspLEI	GCGC	2 cut(s)	78, 280
AsuHPI	GGTGA	1 cut(s)	145
AsuNHI	GCTAGC	2 cut(s)	280, 518
AvrII	CCTAGG	1 cut(s)	1084
BalI	TGGCCA	1 cut(s)	324
BanI	GGYRCC	1 cut(s)	656
BbrPI	CACGTG	1 cut(s)	926
Bbv12I	GWGCWC	1 cut(s)	1203
BbvI	GCAGC	5 cut(s)	90, 435, 502, 871, 992
BccI	CCATC	4 cut(s)	383, 410, 828, 1142
BciT130I	CCWGG	1 cut(s)	993
BclI	TGATCA	1 cut(s)	1161
BcoDI	GTCTC	4 cut(s)	44, 593, 780, 1155
BcuI	ACTAGT	1 cut(s)	53
BfaI	CTAG	6 cut(s)	54, 182, 281, 519, 953, 1085
BfmI	CTRYAG	1 cut(s)	1190
BfuAI	ACCTGC	1 cut(s)	644
BisI	GCNGC	6 cut(s)	79, 449, 516, 860, 981, 1193
BlnI	CCTAGG	1 cut(s)	1084
BlsI	GCNGC	6 cut(s)	80, 450, 517, 861, 982, 1194
Bme1390I	CCNGG	1 cut(s)	993
BmiI	GGNNCC	1 cut(s)	658
BmrFI	CCNGG	1 cut(s)	993
BmsI	GCATC	2 cut(s)	422, 1000
BmtI	GCTAGC	2 cut(s)	284, 522
BpmI	CTGGAG	2 cut(s)	789, 975
BsaAI	YACGTR	1 cut(s)	926
BsaJI	CCNNGG	3 cut(s)	660, 834, 1084
BsaXI	ACNNNNNCTCC	2 cut(s)	777, 807
Bsc4I	CCNNNNNNNGG	6 cut(s)	45, 244, 594, 619, 738, 995
Bse1I	ACTGG	4 cut(s)	82, 238, 732, 772
Bse3DI	GCAATG	4 cut(s)	315, 391, 854, 1057
BseBI	CCWGG	1 cut(s)	993
BseDI	CCNNGG	3 cut(s)	660, 834, 1084
BseGI	GGATG	6 cut(s)	138, 402, 496, 820, 1015, 1080
BseLI	CCNNNNNNNGG	6 cut(s)	45, 244, 594, 619, 738, 995
BseMI	GCAATG	4 cut(s)	315, 391, 854, 1057
BseMII	CTCAG	1 cut(s)	488
BseNI	ACTGG	4 cut(s)	82, 238, 732, 772
BseRI	GAGGAG	1 cut(s)	492
BseXI	GCAGC	5 cut(s)	90, 435, 502, 871, 992
BsgI	GTGCAG	1 cut(s)	218
BshFI	GGCC	1 cut(s)	324
BshNI	GGYRCC	1 cut(s)	656
BsiHKAI	GWGCWC	1 cut(s)	1203
BsiSI	CCGG	1 cut(s)	1100
BslFI	GGGAC	2 cut(s)	1045, 1087
BslI	CCNNNNNNNGG	6 cut(s)	45, 244, 594, 619, 738, 995
BsmAI	GTCTC	4 cut(s)	44, 593, 780, 1155
BsmFI	GGGAC	2 cut(s)	1045, 1087
BsnI	GGCC	1 cut(s)	324
Bsp1286I	GDGCHC	1 cut(s)	1203
Bsp143I	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
Bsp19I	CCATGG	1 cut(s)	834
BspACI	CCGC	2 cut(s)	248, 996
BspANI	GGCC	1 cut(s)	324
BspCNI	CTCAG	1 cut(s)	487
BspLI	GGNNCC	1 cut(s)	658
BspMAI	CTGCAG	1 cut(s)	1194
BspMI	ACCTGC	1 cut(s)	644
BspOI	GCTAGC	2 cut(s)	284, 522
BspPI	GGATC	3 cut(s)	362, 711, 748
BspT107I	GGYRCC	1 cut(s)	656
BsrDI	GCAATG	4 cut(s)	315, 391, 854, 1057
BsrI	ACTGG	4 cut(s)	82, 238, 732, 772
BssECI	CCNNGG	3 cut(s)	660, 834, 1084
BssMI	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
BssT1I	CCWWGG	3 cut(s)	660, 834, 1084
Bst2UI	CCWGG	1 cut(s)	993
Bst4CI	ACNGT	1 cut(s)	40
Bst6I	CTCTTC	3 cut(s)	510, 898, 1158
BstBAI	YACGTR	1 cut(s)	926
BstC8I	GCNNGC	4 cut(s)	187, 282, 322, 520
BstDEI	CTNAG	1 cut(s)	474
BstDSI	CCRYGG	1 cut(s)	834
BstF5I	GGATG	6 cut(s)	138, 402, 496, 820, 1015, 1080
BstHHI	GCGC	2 cut(s)	78, 280
BstKTI	GATC	6 cut(s)	357, 438, 706, 717, 756, 1164
BstMAI	GTCTC	4 cut(s)	44, 593, 780, 1155
BstMBI	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
BstMWI	GCNNNNNNNGC	5 cut(s)	98, 317, 779, 929, 1198
BstNI	CCWGG	1 cut(s)	993
BstNSI	RCATGY	1 cut(s)	308
BstSCI	CCNGG	1 cut(s)	991
BstSFI	CTRYAG	1 cut(s)	1190
BstV1I	GCAGC	5 cut(s)	90, 435, 502, 871, 992
BstX2I	RGATCY	1 cut(s)	703
BstYI	RGATCY	1 cut(s)	703
BsuRI	GGCC	1 cut(s)	324
BtgI	CCRYGG	1 cut(s)	834
BtsCI	GGATG	6 cut(s)	138, 402, 496, 820, 1015, 1080
BtsIMutI	CAGTG	2 cut(s)	739, 765
BveI	ACCTGC	1 cut(s)	644
Cac8I	GCNNGC	4 cut(s)	187, 282, 322, 520
CaiI	CAGNNNCTG	1 cut(s)	244
CfoI	GCGC	2 cut(s)	78, 280
CseI	GACGC	2 cut(s)	929, 938
Csp6I	GTAC	2 cut(s)	41, 794
CviAII	CATG	5 cut(s)	305, 326, 827, 835, 1159
CviQI	GTAC	2 cut(s)	41, 794
DdeI	CTNAG	1 cut(s)	474
DpnI	GATC	6 cut(s)	356, 437, 705, 716, 755, 1163
DpnII	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
DraI	TTTAAA	1 cut(s)	1020
EaeI	YGGCCR	1 cut(s)	322
Eam1104I	CTCTTC	3 cut(s)	510, 898, 1158
EarI	CTCTTC	3 cut(s)	510, 898, 1158
EciI	GGCGGA	1 cut(s)	263
Eco130I	CCWWGG	3 cut(s)	660, 834, 1084
Eco32I	GATATC	1 cut(s)	223
Eco72I	CACGTG	1 cut(s)	926
EcoRII	CCWGG	1 cut(s)	991
EcoRV	GATATC	1 cut(s)	223
EcoT14I	CCWWGG	3 cut(s)	660, 834, 1084
ErhI	CCWWGG	3 cut(s)	660, 834, 1084
FaeI	CATG	5 cut(s)	308, 329, 830, 838, 1162
FalI	AAGNNNNNCTT	4 cut(s)	284, 316, 1039, 1071
FaqI	GGGAC	2 cut(s)	1045, 1087
FatI	CATG	5 cut(s)	304, 325, 826, 834, 1158
FauI	CCCGC	1 cut(s)	989
FbaI	TGATCA	1 cut(s)	1161
Fnu4HI	GCNGC	6 cut(s)	79, 449, 516, 860, 981, 1193
FokI	GGATG	6 cut(s)	125, 389, 503, 807, 1022, 1067
Fsp4HI	GCNGC	6 cut(s)	79, 449, 516, 860, 981, 1193
FspBI	CTAG	6 cut(s)	54, 182, 281, 519, 953, 1085
GlaI	GCGC	2 cut(s)	77, 279
GluI	GCNGC	6 cut(s)	79, 449, 516, 860, 981, 1193
GsuI	CTGGAG	2 cut(s)	789, 975
HaeIII	GGCC	1 cut(s)	324
HapII	CCGG	1 cut(s)	1100
HgaI	GACGC	2 cut(s)	929, 938
HhaI	GCGC	2 cut(s)	78, 280
Hin1II	CATG	5 cut(s)	308, 329, 830, 838, 1162
Hin6I	GCGC	2 cut(s)	76, 278
HinP1I	GCGC	2 cut(s)	76, 278
HincII	GTYRAC	2 cut(s)	331, 460
HindII	GTYRAC	2 cut(s)	331, 460
HinfI	GANTC	4 cut(s)	253, 499, 839, 908
HpaII	CCGG	1 cut(s)	1100
HphI	GGTGA	1 cut(s)	145
Hpy166II	GTNNAC	5 cut(s)	136, 331, 460, 679, 796
Hpy188I	TCNGA	4 cut(s)	119, 693, 844, 1139
Hpy188III	TCNNGA	4 cut(s)	142, 566, 701, 1174
Hpy8I	GTNNAC	5 cut(s)	136, 331, 460, 679, 796
HpyAV	CCTTC	4 cut(s)	145, 269, 480, 767
HpyCH4III	ACNGT	1 cut(s)	40
HpyCH4IV	ACGT	1 cut(s)	925
HpyF10VI	GCNNNNNNNGC	5 cut(s)	98, 317, 779, 929, 1198
HpyF3I	CTNAG	1 cut(s)	474
HpySE526I	ACGT	1 cut(s)	925
Hsp92II	CATG	5 cut(s)	308, 329, 830, 838, 1162
HspAI	GCGC	2 cut(s)	76, 278
Ksp22I	TGATCA	1 cut(s)	1161
Kzo9I	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
LmnI	GCTCC	3 cut(s)	445, 770, 1198
Lsp1109I	GCAGC	5 cut(s)	90, 435, 502, 871, 992
LweI	GCATC	2 cut(s)	422, 1000
MaeI	CTAG	6 cut(s)	54, 182, 281, 519, 953, 1085
MaeII	ACGT	1 cut(s)	925
MaeIII	GTNAC	4 cut(s)	34, 583, 917, 926
MalI	GATC	6 cut(s)	356, 437, 705, 716, 755, 1163
MboI	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
MboII	GAAGA	7 cut(s)	41, 167, 497, 709, 877, 915, 1145
MflI	RGATCY	1 cut(s)	703
MhlI	GDGCHC	1 cut(s)	1203
MlsI	TGGCCA	1 cut(s)	324
MluCI	AATT	5 cut(s)	93, 166, 540, 1167, 1180
MluNI	TGGCCA	1 cut(s)	324
MlyI	GAGTC	1 cut(s)	493
MmeI	TCCRAC	3 cut(s)	250, 616, 1065
MnlI	CCTC	7 cut(s)	345, 513, 518, 708, 742, 999, 1197
Mox20I	TGGCCA	1 cut(s)	324
MroXI	GAANNNNTTC	1 cut(s)	907
MscI	TGGCCA	1 cut(s)	324
MseI	TTAA	5 cut(s)	8, 72, 96, 339, 1019
MslI	CAYNNNNRTG	2 cut(s)	801, 825
Msp20I	TGGCCA	1 cut(s)	324
MspA1I	CMGCKG	2 cut(s)	478, 1195
MspI	CCGG	1 cut(s)	1100
MspR9I	CCNGG	1 cut(s)	993
MvaI	CCWGG	1 cut(s)	993
MwoI	GCNNNNNNNGC	5 cut(s)	98, 317, 779, 929, 1198
NcoI	CCATGG	1 cut(s)	834
NdeII	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
NheI	GCTAGC	2 cut(s)	280, 518
NlaIII	CATG	5 cut(s)	308, 329, 830, 838, 1162
NlaIV	GGNNCC	1 cut(s)	658
NmuCI	GTSAC	3 cut(s)	583, 917, 926
NspI	RCATGY	1 cut(s)	308
OliI	CACNNNNGTG	1 cut(s)	801
PaqCI	CACCTGC	1 cut(s)	644
PciI	ACATGT	1 cut(s)	304
PdmI	GAANNNNTTC	1 cut(s)	907
PfeI	GAWTC	3 cut(s)	253, 839, 908
PflMI	CCANNNNNTGG	1 cut(s)	244
PkrI	GCNGC	6 cut(s)	80, 450, 517, 861, 982, 1194
PleI	GAGTC	1 cut(s)	493
PmaCI	CACGTG	1 cut(s)	926
PmlI	CACGTG	1 cut(s)	926
PpsI	GAGTC	1 cut(s)	493
Ppu21I	YACGTR	1 cut(s)	926
PscI	ACATGT	1 cut(s)	304
Psp6I	CCWGG	1 cut(s)	991
PspCI	CACGTG	1 cut(s)	926
PspGI	CCWGG	1 cut(s)	991
PspN4I	GGNNCC	1 cut(s)	658
PstI	CTGCAG	1 cut(s)	1194
PstNI	CAGNNNCTG	1 cut(s)	244
PsuI	RGATCY	1 cut(s)	703
PvuII	CAGCTG	2 cut(s)	478, 1195
RsaI	GTAC	2 cut(s)	42, 795
RsaNI	GTAC	2 cut(s)	41, 794
RseI	CAYNNNNRTG	2 cut(s)	801, 825
SaqAI	TTAA	5 cut(s)	8, 72, 96, 339, 1019
SatI	GCNGC	6 cut(s)	79, 449, 516, 860, 981, 1193
Sau3AI	GATC	6 cut(s)	354, 435, 703, 714, 753, 1161
SchI	GAGTC	1 cut(s)	493
ScrFI	CCNGG	1 cut(s)	993
SduI	GDGCHC	1 cut(s)	1203
SfaNI	GCATC	2 cut(s)	422, 1000
SfcI	CTRYAG	1 cut(s)	1190
SmiMI	CAYNNNNRTG	2 cut(s)	801, 825
SpeI	ACTAGT	1 cut(s)	53
Sse9I	AATT	5 cut(s)	93, 166, 540, 1167, 1180
SsiI	CCGC	2 cut(s)	248, 996
SspI	AATATT	1 cut(s)	649
SspMI	CTAG	6 cut(s)	54, 182, 281, 519, 953, 1085
StyD4I	CCNGG	1 cut(s)	991
StyI	CCWWGG	3 cut(s)	660, 834, 1084
TaaI	ACNGT	1 cut(s)	40
TaiI	ACGT	1 cut(s)	928
TaqI	TCGA	1 cut(s)	1145
TasI	AATT	5 cut(s)	93, 166, 540, 1167, 1180
TatI	WGTACW	1 cut(s)	793
TfiI	GAWTC	3 cut(s)	253, 839, 908
Tru1I	TTAA	5 cut(s)	8, 72, 96, 339, 1019
Tru9I	TTAA	5 cut(s)	8, 72, 96, 339, 1019
TscAI	CASTG	2 cut(s)	739, 772
TseFI	GTSAC	3 cut(s)	583, 917, 926
TseI	GCWGC	6 cut(s)	78, 448, 515, 859, 980, 1192
Tsp45I	GTSAC	3 cut(s)	583, 917, 926
TspDTI	ATGAA	6 cut(s)	140, 164, 167, 497, 507, 1099
TspRI	CASTG	2 cut(s)	739, 772
Van91I	CCANNNNNTGG	1 cut(s)	244
XapI	RAATTY	1 cut(s)	1167
XceI	RCATGY	1 cut(s)	308
XcmI	CCANNNNNNNNNTGG	2 cut(s)	427, 999
XmaJI	CCTAGG	1 cut(s)	1084
XmnI	GAANNNNTTC	1 cut(s)	907
XspI	CTAG	6 cut(s)	54, 182, 281, 519, 953, 1085

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.