MD01G1175400.v1.1

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
27653814 .. 27656413
2600 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1175400.v1.1.491

Sequence Viewer

Length: 1347 bp
ATGGATTTCAGACTGTTTGAGGCTTCTCAAACAGGAGATAACCAGCTCTTGCACCAGTTGCTAGCAGAGAATCCACTTCTACTCCATGACCTTGCCCTAACTTCCACCGAGAACCCGCTACATGTCGCTTCGTTTGCCGGACATGTCGAATTCGTTAAGGAGATTGTGAAGTTGAAACCAGCTTTTGTGTTAGAAATGAACCAGGATGGGTTTGGCCCCATGCACATCGCGTCAGCCAACGGTTACTTGGAGATTGTAAGGGAGCTGCTGAGAGTTGACCCGAGACTCTGCCGGATGAACGGAAGAGATGGATGGACTCCTCTTCATTGTGCTGCTGCTAAGGGAAGGGCTGATGTTGTCGGAGAAATGGTTTTGACCTGCCCGGAAAGTGTCGAAGATGTGACTCTACAAGGGGAGACTTCCTTGCATCTTGCTGTTAAGAACTGCCAGTTTGAAGCAGTTAAACTGTTGGTTGAATTGGTCAGGGAACTGAGGAAGGTGAACGTTTTGAATATGAAGGACAAACATGGTAATTCAGTTCTTCACCTAGCAACCTGGAAGAAACTGCACGAGGTTGTGGAGTGGTTAGTTGGCAATGGAACTACTCCAAGCGCATTGGAAGTAAACATTGTAAACCAGGGTGGTCTCACACCTCTTGATCTTCTACTAGTCTTCCCGAGTGAAGCCGGTGATAGGGAAATCGAAGAGATCCTTCGTAGTGCCGGAGCTTCGAGAGCACAAGACATAAACCATACTCCCTCTCATTGCCCCATGGAAACCAATACCCTTCAGCTGCAGCAGCCAAAAAACTTGATGGAATACTTCAAGTTCAAAAAGGGCAGAGACTCTCCTAGTGATGCCCGCACTGCGCTACTAGTTATCTCTGTACTAGTGGCTACCGCCACCTTTCAAGTTGGACTCAGCCCTCCGAATGGCATTTGGCAGGACAGCTCCGGATCAAACAATAATGGAGCTGGCAGTGGGAGCAATGAACCAGCTGCACACTTAGCAGGGAAGTCCATCATGGGTTCTAACAATGCAGTTGCATTTGTCTTCTTTGTGGCTTTCAACTCGATTGGATTTTCACTTTCACTTTACATGATCAATGTCCTCACCAGCAACTTCCCTCTGCAGTTGGAGCTTCAAATCTGTATCGTTGCGGTCTACTGCACGTACAACTTTGCAGTTACCAGCATTGCACCGGATAACACGAAGCTCATCATAATTGTGGTCACTTCAGTTTTGCCTACTTTGGTTTCACTTGCTGTCCCATGCGCTAGACAGCTTATCATGATCAGGGTTAGAGAACCTGTGCTAAATTGGACTCGAAGGTTCATTTTACAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

449

Amino Acids

49.16

Weight (kDa)

6.02

Isoelectric Point (pI)

29.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 5 - 91 2.8e-10 Ankyrin repeats (3 copies)
Ank_2 PF12796 99 - 159 2.5e-09 Ankyrin repeats (3 copies)
Ank_2 PF12796 135 - 202 3.8e-09 Ankyrin repeats (3 copies)
PGG PF13962 286 - 390 2.1e-14 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 386
AccI GTMKAC 1 cut(s) 1164
AccII CGCG 1 cut(s) 230
AccIII TCCGGA 1 cut(s) 953
AciI CCGC 4 cut(s) 116, 862, 900, 1160
AclI AACGTT 1 cut(s) 504
AclWI GGATC 2 cut(s) 703, 964
AcsI RAATTY 1 cut(s) 149
AcuI CTGAAG 2 cut(s) 773, 1221
AfaI GTAC 2 cut(s) 888, 1175
AfiI CCNNNNNNNGG 2 cut(s) 693, 932
AflIII ACRYGT 2 cut(s) 121, 142
AgsI TTSAA 9 cut(s) 175, 455, 476, 511, 826, 832, 911, 1069, 1145
AhlI ACTAGT 3 cut(s) 667, 874, 889
AjnI CCWGG 3 cut(s) 201, 554, 636
Alw21I GWGCWC 1 cut(s) 739
Alw26I GTCTC 4 cut(s) 277, 410, 650, 837
AlwI GGATC 2 cut(s) 703, 964
Ama87I CYCGRG 2 cut(s) 280, 676
Aor13HI TCCGGA 1 cut(s) 953
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 7 cut(s) 265, 332, 335, 793, 796, 799, 998
ApoI RAATTY 1 cut(s) 149
AspLEI GCGC 3 cut(s) 614, 871, 1277
AspS9I GGNCC 1 cut(s) 215
AsuC2I CCSGG 1 cut(s) 383
AsuHPI GGTGA 4 cut(s) 511, 536, 701, 1105
AsuNHI GCTAGC 1 cut(s) 61
AvaI CYCGRG 2 cut(s) 280, 676
BauI CACGAG 1 cut(s) 569
BbsI GAAGAC 2 cut(s) 664, 1045
Bbv12I GWGCWC 1 cut(s) 739
BbvI GCAGC 7 cut(s) 252, 319, 322, 780, 808, 811, 985
BccI CCATC 5 cut(s) 200, 302, 306, 808, 1028
BciT130I CCWGG 3 cut(s) 203, 556, 638
BclI TGATCA 2 cut(s) 1101, 1293
BcnI CCSGG 1 cut(s) 383
BcoDI GTCTC 4 cut(s) 277, 410, 650, 837
BcuI ACTAGT 3 cut(s) 667, 874, 889
BfaI CTAG 7 cut(s) 62, 548, 668, 852, 875, 890, 1278
BfmI CTRYAG 2 cut(s) 794, 1130
BfuAI ACCTGC 1 cut(s) 386
BisI GCNGC 7 cut(s) 266, 333, 336, 794, 797, 800, 999
BlsI GCNGC 7 cut(s) 267, 334, 337, 795, 798, 801, 1000
Bme1390I CCNGG 4 cut(s) 203, 383, 556, 638
BmeT110I CYCGRG 2 cut(s) 280, 676
BmgT120I GGNCC 1 cut(s) 215
BmiI GGNNCC 1 cut(s) 217
BmrFI CCNGG 4 cut(s) 203, 383, 556, 638
BmsI GCATC 2 cut(s) 436, 847
BmtI GCTAGC 1 cut(s) 65
BpiI GAAGAC 2 cut(s) 664, 1045
Bpu10I CCTNAGC 1 cut(s) 339
BpuMI CCSGG 1 cut(s) 383
BsaAI YACGTR 1 cut(s) 1173
BsaI GGTCTC 1 cut(s) 650
BsaJI CCNNGG 2 cut(s) 637, 771
BsaWI WCCGGW 2 cut(s) 953, 1201
BsaXI ACNNNNNCTCC 4 cut(s) 66, 96, 354, 384
Bsc4I CCNNNNNNNGG 2 cut(s) 693, 932
Bse118I RCCGGY 1 cut(s) 686
Bse1I ACTGG 2 cut(s) 55, 448
Bse3DI GCAATG 4 cut(s) 601, 763, 994, 1194
BseAI TCCGGA 1 cut(s) 953
BseBI CCWGG 3 cut(s) 203, 556, 638
BseDI CCNNGG 2 cut(s) 637, 771
BseGI GGATG 3 cut(s) 211, 300, 317
BseLI CCNNNNNNNGG 2 cut(s) 693, 932
BseMI GCAATG 4 cut(s) 601, 763, 994, 1194
BseMII CTCAG 3 cut(s) 260, 482, 934
BseNI ACTGG 2 cut(s) 55, 448
BseRI GAGGAG 1 cut(s) 309
BseXI GCAGC 7 cut(s) 252, 319, 322, 780, 808, 811, 985
BsgI GTGCAG 3 cut(s) 551, 984, 1153
Bsh1236I CGCG 1 cut(s) 230
BshFI GGCC 1 cut(s) 216
BsiHKAI GWGCWC 1 cut(s) 739
BsiHKCI CYCGRG 2 cut(s) 280, 676
BsiSI CCGG 7 cut(s) 138, 292, 383, 687, 723, 954, 1202
BslFI GGGAC 1 cut(s) 1253
BslI CCNNNNNNNGG 2 cut(s) 693, 932
BsmAI GTCTC 4 cut(s) 277, 410, 650, 837
BsmFI GGGAC 1 cut(s) 1253
BsnI GGCC 1 cut(s) 216
Bso31I GGTCTC 1 cut(s) 650
BsoBI CYCGRG 2 cut(s) 280, 676
Bsp1286I GDGCHC 1 cut(s) 739
Bsp13I TCCGGA 1 cut(s) 953
Bsp143I GATC 5 cut(s) 658, 708, 956, 1101, 1293
Bsp19I CCATGG 1 cut(s) 771
BspACI CCGC 4 cut(s) 116, 862, 900, 1160
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 3 cut(s) 261, 483, 933
BspEI TCCGGA 1 cut(s) 953
BspFNI CGCG 1 cut(s) 230
BspHI TCATGA 1 cut(s) 1290
BspLI GGNNCC 1 cut(s) 217
BspMAI CTGCAG 2 cut(s) 798, 1134
BspMI ACCTGC 1 cut(s) 386
BspOI GCTAGC 1 cut(s) 65
BspPI GGATC 2 cut(s) 703, 964
BspTNI GGTCTC 1 cut(s) 650
BsrDI GCAATG 4 cut(s) 601, 763, 994, 1194
BsrFI RCCGGY 1 cut(s) 686
BsrI ACTGG 2 cut(s) 55, 448
BssAI RCCGGY 1 cut(s) 686
BssECI CCNNGG 2 cut(s) 637, 771
BssMI GATC 5 cut(s) 658, 708, 956, 1101, 1293
BssSI CACGAG 1 cut(s) 569
BssT1I CCWWGG 1 cut(s) 771
Bst2BI CACGAG 1 cut(s) 569
Bst2UI CCWGG 3 cut(s) 203, 556, 638
Bst4CI ACNGT 3 cut(s) 15, 242, 468
Bst6I CTCTTC 3 cut(s) 298, 327, 699
BstAPI GCANNNNNTGC 1 cut(s) 58
BstBAI YACGTR 1 cut(s) 1173
BstC8I GCNNGC 3 cut(s) 63, 862, 976
BstDEI CTNAG 5 cut(s) 269, 339, 491, 920, 1006
BstDSI CCRYGG 1 cut(s) 771
BstF5I GGATG 3 cut(s) 211, 300, 317
BstFNI CGCG 1 cut(s) 230
BstHHI GCGC 3 cut(s) 614, 871, 1277
BstKTI GATC 5 cut(s) 661, 711, 959, 1104, 1296
BstMAI GTCTC 4 cut(s) 277, 410, 650, 837
BstMBI GATC 5 cut(s) 658, 708, 956, 1101, 1293
BstMWI GCNNNNNNNGC 8 cut(s) 58, 134, 734, 799, 866, 984, 1007, 1138
BstNI CCWGG 3 cut(s) 203, 556, 638
BstNSI RCATGY 2 cut(s) 125, 146
BstSCI CCNGG 4 cut(s) 201, 381, 554, 636
BstSFI CTRYAG 2 cut(s) 794, 1130
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 7 cut(s) 252, 319, 322, 780, 808, 811, 985
BstV2I GAAGAC 2 cut(s) 664, 1045
BstX2I RGATCY 1 cut(s) 708
BstYI RGATCY 1 cut(s) 708
BsuRI GGCC 1 cut(s) 216
BtgI CCRYGG 1 cut(s) 771
BtgZI GCGATG 1 cut(s) 211
BtsCI GGATG 3 cut(s) 211, 300, 317
BtsI GCAGTG 2 cut(s) 864, 985
BtsIMutI CAGTG 2 cut(s) 864, 985
BveI ACCTGC 1 cut(s) 386
Cac8I GCNNGC 3 cut(s) 63, 862, 976
CciI TCATGA 1 cut(s) 1290
CfoI GCGC 3 cut(s) 614, 871, 1277
Cfr10I RCCGGY 1 cut(s) 686
Cfr13I GGNCC 1 cut(s) 215
CseI GACGC 1 cut(s) 219
Csp6I GTAC 2 cut(s) 887, 1174
CviQI GTAC 2 cut(s) 887, 1174
DdeI CTNAG 5 cut(s) 269, 339, 491, 920, 1006
DpnI GATC 5 cut(s) 660, 710, 958, 1103, 1295
DpnII GATC 5 cut(s) 658, 708, 956, 1101, 1293
Eam1104I CTCTTC 3 cut(s) 298, 327, 699
EarI CTCTTC 3 cut(s) 298, 327, 699
Eco130I CCWWGG 1 cut(s) 771
Eco31I GGTCTC 1 cut(s) 650
Eco57I CTGAAG 2 cut(s) 773, 1221
Eco88I CYCGRG 2 cut(s) 280, 676
EcoRI GAATTC 1 cut(s) 149
EcoRII CCWGG 3 cut(s) 201, 554, 636
EcoT14I CCWWGG 1 cut(s) 771
ErhI CCWWGG 1 cut(s) 771
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 1 cut(s) 1253
FauI CCCGC 2 cut(s) 123, 869
FbaI TGATCA 2 cut(s) 1101, 1293
FblI GTMKAC 1 cut(s) 1164
Fnu4HI GCNGC 7 cut(s) 266, 333, 336, 794, 797, 800, 999
FokI GGATG 3 cut(s) 218, 307, 324
Fsp4HI GCNGC 7 cut(s) 266, 333, 336, 794, 797, 800, 999
FspBI CTAG 7 cut(s) 62, 548, 668, 852, 875, 890, 1278
GlaI GCGC 3 cut(s) 613, 870, 1276
GluI GCNGC 7 cut(s) 266, 333, 336, 794, 797, 800, 999
HaeIII GGCC 1 cut(s) 216
HapII CCGG 7 cut(s) 138, 292, 383, 687, 723, 954, 1202
HgaI GACGC 1 cut(s) 219
HhaI GCGC 3 cut(s) 614, 871, 1277
Hin6I GCGC 3 cut(s) 612, 869, 1275
HinP1I GCGC 3 cut(s) 612, 869, 1275
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 7 cut(s) 70, 285, 316, 403, 845, 918, 1324
HpaII CCGG 7 cut(s) 138, 292, 383, 687, 723, 954, 1202
HphI GGTGA 4 cut(s) 511, 536, 701, 1105
Hpy166II GTNNAC 5 cut(s) 277, 502, 625, 634, 1165
Hpy188I TCNGA 3 cut(s) 11, 362, 930
Hpy188III TCNNGA 5 cut(s) 656, 676, 732, 954, 1291
Hpy8I GTNNAC 5 cut(s) 277, 502, 625, 634, 1165
HpyAV CCTTC 6 cut(s) 339, 490, 511, 722, 797, 1323
HpyCH4III ACNGT 3 cut(s) 15, 242, 468
HpyCH4IV ACGT 2 cut(s) 504, 1172
HpyF10VI GCNNNNNNNGC 8 cut(s) 58, 134, 734, 799, 866, 984, 1007, 1138
HpyF3I CTNAG 5 cut(s) 269, 339, 491, 920, 1006
HpySE526I ACGT 2 cut(s) 504, 1172
HspAI GCGC 3 cut(s) 612, 869, 1275
Kpn2I TCCGGA 1 cut(s) 953
Ksp22I TGATCA 2 cut(s) 1101, 1293
Kzo9I GATC 5 cut(s) 658, 708, 956, 1101, 1293
LmnI GCTCC 6 cut(s) 262, 725, 956, 971, 984, 1138
Lsp1109I GCAGC 7 cut(s) 252, 319, 322, 780, 808, 811, 985
LweI GCATC 2 cut(s) 436, 847
MaeI CTAG 7 cut(s) 62, 548, 668, 852, 875, 890, 1278
MaeII ACGT 2 cut(s) 504, 1172
MaeIII GTNAC 4 cut(s) 242, 400, 1186, 1231
MalI GATC 5 cut(s) 660, 710, 958, 1103, 1295
MboI GATC 5 cut(s) 658, 708, 956, 1101, 1293
MboII GAAGA 9 cut(s) 314, 315, 407, 533, 571, 653, 664, 716, 1045
MflI RGATCY 1 cut(s) 708
MhlI GDGCHC 1 cut(s) 739
MluCI AATT 5 cut(s) 149, 476, 532, 1224, 1318
MlyI GAGTC 6 cut(s) 279, 310, 397, 839, 912, 1318
MmeI TCCRAC 3 cut(s) 340, 895, 1116
MnlI CCTC 9 cut(s) 13, 330, 486, 565, 663, 769, 936, 1121, 1137
MroI TCCGGA 1 cut(s) 953
MseI TTAA 3 cut(s) 156, 438, 462
MslI CAYNNNNRTG 1 cut(s) 1226
MspA1I CMGCKG 2 cut(s) 793, 998
MspI CCGG 7 cut(s) 138, 292, 383, 687, 723, 954, 1202
MspR9I CCNGG 4 cut(s) 203, 383, 556, 638
MvaI CCWGG 3 cut(s) 203, 556, 638
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 8 cut(s) 58, 134, 734, 799, 866, 984, 1007, 1138
NciI CCSGG 1 cut(s) 383
NcoI CCATGG 1 cut(s) 771
NdeII GATC 5 cut(s) 658, 708, 956, 1101, 1293
NheI GCTAGC 1 cut(s) 61
NlaIV GGNNCC 1 cut(s) 217
NmuCI GTSAC 2 cut(s) 400, 1231
NspI RCATGY 2 cut(s) 125, 146
PagI TCATGA 1 cut(s) 1290
PciI ACATGT 2 cut(s) 121, 142
PfeI GAWTC 1 cut(s) 70
PkrI GCNGC 7 cut(s) 267, 334, 337, 795, 798, 801, 1000
PleI GAGTC 6 cut(s) 279, 310, 397, 839, 912, 1318
PpsI GAGTC 6 cut(s) 279, 310, 397, 839, 912, 1318
Ppu21I YACGTR 1 cut(s) 1173
PscI ACATGT 2 cut(s) 121, 142
Psp1406I AACGTT 1 cut(s) 504
Psp6I CCWGG 3 cut(s) 201, 554, 636
PspGI CCWGG 3 cut(s) 201, 554, 636
PspN4I GGNNCC 1 cut(s) 217
PspPI GGNCC 1 cut(s) 215
PstI CTGCAG 2 cut(s) 798, 1134
PsuI RGATCY 1 cut(s) 708
PvuII CAGCTG 2 cut(s) 793, 998
RsaI GTAC 2 cut(s) 888, 1175
RsaNI GTAC 2 cut(s) 887, 1174
RseI CAYNNNNRTG 1 cut(s) 1226
SaqAI TTAA 3 cut(s) 156, 438, 462
SatI GCNGC 7 cut(s) 266, 333, 336, 794, 797, 800, 999
Sau3AI GATC 5 cut(s) 658, 708, 956, 1101, 1293
Sau96I GGNCC 1 cut(s) 215
SchI GAGTC 6 cut(s) 279, 310, 397, 839, 912, 1318
ScrFI CCNGG 4 cut(s) 203, 383, 556, 638
SduI GDGCHC 1 cut(s) 739
SfaNI GCATC 2 cut(s) 436, 847
SfcI CTRYAG 2 cut(s) 794, 1130
SmiMI CAYNNNNRTG 1 cut(s) 1226
SpeI ACTAGT 3 cut(s) 667, 874, 889
Sse9I AATT 5 cut(s) 149, 476, 532, 1224, 1318
SsiI CCGC 4 cut(s) 116, 862, 900, 1160
SspMI CTAG 7 cut(s) 62, 548, 668, 852, 875, 890, 1278
StyD4I CCNGG 4 cut(s) 201, 381, 554, 636
StyI CCWWGG 1 cut(s) 771
TaaI ACNGT 3 cut(s) 15, 242, 468
TaiI ACGT 2 cut(s) 507, 1175
TaqI TCGA 6 cut(s) 147, 393, 702, 731, 1073, 1327
TasI AATT 5 cut(s) 149, 476, 532, 1224, 1318
TatI WGTACW 1 cut(s) 886
TfiI GAWTC 1 cut(s) 70
Tru1I TTAA 3 cut(s) 156, 438, 462
Tru9I TTAA 3 cut(s) 156, 438, 462
TscAI CASTG 2 cut(s) 871, 985
TseFI GTSAC 2 cut(s) 400, 1231
TseI GCWGC 7 cut(s) 265, 332, 335, 793, 796, 799, 998
Tsp45I GTSAC 2 cut(s) 400, 1231
TspDTI ATGAA 6 cut(s) 212, 311, 314, 530, 1005, 1324
TspGWI ACGGA 1 cut(s) 315
TspRI CASTG 2 cut(s) 871, 985
XapI RAATTY 1 cut(s) 149
XceI RCATGY 2 cut(s) 125, 146
XcmI CCANNNNNNNNNTGG 2 cut(s) 209, 244
XmiI GTMKAC 1 cut(s) 1164
XspI CTAG 7 cut(s) 62, 548, 668, 852, 875, 890, 1278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.