ankyrin repeat-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51160 |
| fragaria_vesca | FvH4_7g26641 FvH4_7g26643 FvH4_7g26670 |
| malus_domestica | MD01G1175400.v1.1 MD07G1241300.v1.1 MD07G1241500.v1.1 MD12G1230800.v1.1 MD12G1230900.v1.1 MD12G1231100.v1.1 MD12G1231200.v1.1 |
| prunus_persica | Prupe.2G270400_v2.0.a1 Prupe.2G270500_v2.0.a1 |
| pyrus_communis | pycom07g21780 pycom07g21790 pycom07g21800 pycom07g21860 pycom07g21970 pycom12g21410 |
| rosa_chinensis | RchiOBHm_Chr1g0373271 RchiOBHm_Chr1g0373281 |
| rosa_laevigata | RLG00000026830 RLG00000026831 RLG00000026832 |
| rosa_multiflora | Rmu_co8287043.1_g000001 Rmu_sc0000170.1_g000005 Rmu_ssc0000435.1_g000001 Rmu_ssc0000435.1_g000002 |
| rosa_rugosa | Rorug01G0376800 Rorug01G0376800 |
| rosa_samantha | Rh1AG385600 Rh1AG385700 Rh1BG349800 Rh1BG349900 Rh1CG363000 Rh1CG363100 Rh1DG380500 Rh1DG380600 Rh1DG380700 Rh7DG228200 |
| rosa_wichuraiana | Rw1G034920 Rw1G034930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 3 cut(s) | 147, 351, 1200 |
| AccII | CGCG | 1 cut(s) | 911 |
| AciI | CCGC | 4 cut(s) | 234, 333, 1196, 1220 |
| AclWI | GGATC | 3 cut(s) | 669, 1360, 1373 |
| AcoI | YGGCCR | 1 cut(s) | 942 |
| AcsI | RAATTY | 3 cut(s) | 464, 628, 978 |
| AfaI | GTAC | 3 cut(s) | 408, 506, 1038 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 240, 339, 411, 690, 974 |
| AflIII | ACRYGT | 2 cut(s) | 121, 795 |
| AgeI | ACCGGT | 1 cut(s) | 683 |
| AgsI | TTSAA | 8 cut(s) | 175, 395, 514, 874, 953, 1105, 1181, 1382 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1328 |
| AhlI | ACTAGT | 1 cut(s) | 931 |
| AjiI | CACGTC | 1 cut(s) | 798 |
| AjnI | CCWGG | 1 cut(s) | 557 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 576, 608 |
| AleI | CACNNNNGTG | 1 cut(s) | 753 |
| AluBI | AGCT | 4 cut(s) | 295, 656, 725, 1177 |
| AluI | AGCT | 4 cut(s) | 295, 656, 725, 1177 |
| Alw26I | GTCTC | 5 cut(s) | 277, 410, 653, 800, 879 |
| AlwI | GGATC | 3 cut(s) | 669, 1360, 1373 |
| AoxI | GGCC | 1 cut(s) | 942 |
| ApeKI | GCWGC | 8 cut(s) | 444, 820, 829, 838, 913, 1020, 1023, 1307 |
| ApoI | RAATTY | 3 cut(s) | 464, 628, 978 |
| AseI | ATTAAT | 1 cut(s) | 1385 |
| AsiGI | ACCGGT | 1 cut(s) | 683 |
| AspLEI | GCGC | 1 cut(s) | 913 |
| AspS9I | GGNCC | 1 cut(s) | 1053 |
| AsuC2I | CCSGG | 2 cut(s) | 203, 1254 |
| AsuHPI | GGTGA | 3 cut(s) | 419, 698, 1257 |
| AsuNHI | GCTAGC | 1 cut(s) | 335 |
| AvaII | GGWCC | 1 cut(s) | 1053 |
| BamHI | GGATCC | 1 cut(s) | 1365 |
| BanII | GRGCYC | 1 cut(s) | 1259 |
| BbsI | GAAGAC | 2 cut(s) | 661, 851 |
| BbvCI | CCTCAGC | 1 cut(s) | 269 |
| BbvI | GCAGC | 8 cut(s) | 456, 832, 841, 850, 900, 1032, 1035, 1294 |
| BccI | CCATC | 3 cut(s) | 200, 1064, 1248 |
| BceAI | ACGGC | 1 cut(s) | 957 |
| BciT130I | CCWGG | 1 cut(s) | 559 |
| BcnI | CCSGG | 2 cut(s) | 203, 1254 |
| BcoDI | GTCTC | 5 cut(s) | 277, 410, 653, 800, 879 |
| BcuI | ACTAGT | 1 cut(s) | 931 |
| BfaI | CTAG | 6 cut(s) | 336, 551, 894, 917, 932, 1320 |
| BfmI | CTRYAG | 1 cut(s) | 1210 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1316 |
| BisI | GCNGC | 9 cut(s) | 333, 445, 821, 830, 839, 914, 1021, 1024, 1308 |
| BlsI | GCNGC | 9 cut(s) | 334, 446, 822, 831, 840, 915, 1022, 1025, 1309 |
| Bme1390I | CCNGG | 3 cut(s) | 203, 559, 1254 |
| Bme18I | GGWCC | 1 cut(s) | 1053 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1328 |
| BmgBI | CACGTC | 1 cut(s) | 798 |
| BmgT120I | GGNCC | 1 cut(s) | 1053 |
| BmiI | GGNNCC | 2 cut(s) | 616, 1367 |
| BmrFI | CCNGG | 3 cut(s) | 203, 559, 1254 |
| BmsI | GCATC | 5 cut(s) | 61, 239, 255, 889, 1197 |
| BmtI | GCTAGC | 1 cut(s) | 339 |
| BpiI | GAAGAC | 2 cut(s) | 661, 851 |
| BpmI | CTGGAG | 2 cut(s) | 741, 1151 |
| Bpu10I | CCTNAGC | 1 cut(s) | 269 |
| BpuMI | CCSGG | 2 cut(s) | 203, 1254 |
| Bsa29I | ATCGAT | 1 cut(s) | 55 |
| BsaAI | YACGTR | 1 cut(s) | 905 |
| BsaI | GGTCTC | 1 cut(s) | 653 |
| BsaJI | CCNNGG | 1 cut(s) | 618 |
| BsaWI | WCCGGW | 3 cut(s) | 279, 683, 752 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 66, 96, 729, 759 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 240, 339, 411, 690, 974 |
| Bse118I | RCCGGY | 1 cut(s) | 683 |
| Bse1I | ACTGG | 5 cut(s) | 448, 868, 1021, 1034, 1168 |
| Bse3DI | GCAATG | 2 cut(s) | 1033, 1232 |
| BseBI | CCWGG | 1 cut(s) | 559 |
| BseCI | ATCGAT | 1 cut(s) | 55 |
| BseDI | CCNNGG | 1 cut(s) | 618 |
| BseGI | GGATG | 3 cut(s) | 10, 211, 230 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 240, 339, 411, 690, 974 |
| BseMI | GCAATG | 2 cut(s) | 1033, 1232 |
| BseMII | CTCAG | 2 cut(s) | 41, 260 |
| BseNI | ACTGG | 5 cut(s) | 448, 868, 1021, 1034, 1168 |
| BseRI | GAGGAG | 1 cut(s) | 309 |
| BseXI | GCAGC | 8 cut(s) | 456, 832, 841, 850, 900, 1032, 1035, 1294 |
| BseYI | CCCAGC | 1 cut(s) | 137 |
| BsgI | GTGCAG | 1 cut(s) | 463 |
| Bsh1236I | CGCG | 1 cut(s) | 911 |
| BshFI | GGCC | 1 cut(s) | 944 |
| BshTI | ACCGGT | 1 cut(s) | 683 |
| BshVI | ATCGAT | 1 cut(s) | 55 |
| BsiSI | CCGG | 5 cut(s) | 202, 280, 684, 753, 1253 |
| BslFI | GGGAC | 2 cut(s) | 972, 1027 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 240, 339, 411, 690, 974 |
| BsmAI | GTCTC | 5 cut(s) | 277, 410, 653, 800, 879 |
| BsmFI | GGGAC | 2 cut(s) | 972, 1027 |
| BsnI | GGCC | 1 cut(s) | 944 |
| Bso31I | GGTCTC | 1 cut(s) | 653 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1259 |
| Bsp1407I | TGTACA | 1 cut(s) | 504 |
| Bsp143I | GATC | 3 cut(s) | 661, 1140, 1365 |
| BspACI | CCGC | 4 cut(s) | 234, 333, 1196, 1220 |
| BspANI | GGCC | 1 cut(s) | 944 |
| BspCNI | CTCAG | 2 cut(s) | 40, 261 |
| BspDI | ATCGAT | 1 cut(s) | 55 |
| BspFNI | CGCG | 1 cut(s) | 911 |
| BspLI | GGNNCC | 2 cut(s) | 616, 1367 |
| BspOI | GCTAGC | 1 cut(s) | 339 |
| BspPI | GGATC | 3 cut(s) | 669, 1360, 1373 |
| BspTNI | GGTCTC | 1 cut(s) | 653 |
| BsrDI | GCAATG | 2 cut(s) | 1033, 1232 |
| BsrFI | RCCGGY | 1 cut(s) | 683 |
| BsrGI | TGTACA | 1 cut(s) | 504 |
| BsrI | ACTGG | 5 cut(s) | 448, 868, 1021, 1034, 1168 |
| BssAI | RCCGGY | 1 cut(s) | 683 |
| BssECI | CCNNGG | 1 cut(s) | 618 |
| BssMI | GATC | 3 cut(s) | 661, 1140, 1365 |
| BssNAI | GTATAC | 1 cut(s) | 1201 |
| BssT1I | CCWWGG | 1 cut(s) | 618 |
| Bst1107I | GTATAC | 1 cut(s) | 1201 |
| Bst2UI | CCWGG | 1 cut(s) | 559 |
| Bst4CI | ACNGT | 6 cut(s) | 406, 421, 541, 890, 992, 1269 |
| Bst6I | CTCTTC | 1 cut(s) | 298 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 58 |
| BstAUI | TGTACA | 1 cut(s) | 504 |
| BstBAI | YACGTR | 1 cut(s) | 905 |
| BstC8I | GCNNGC | 3 cut(s) | 63, 293, 337 |
| BstDEI | CTNAG | 2 cut(s) | 27, 269 |
| BstF5I | GGATG | 3 cut(s) | 10, 211, 230 |
| BstFNI | CGCG | 1 cut(s) | 911 |
| BstHHI | GCGC | 1 cut(s) | 913 |
| BstKTI | GATC | 3 cut(s) | 664, 1143, 1368 |
| BstMAI | GTCTC | 5 cut(s) | 277, 410, 653, 800, 879 |
| BstMBI | GATC | 3 cut(s) | 661, 1140, 1365 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 58, 134, 731, 826, 829, 835, 838, 908, 1316 |
| BstNI | CCWGG | 1 cut(s) | 559 |
| BstNSI | RCATGY | 2 cut(s) | 125, 146 |
| BstSCI | CCNGG | 3 cut(s) | 201, 557, 1252 |
| BstSFI | CTRYAG | 1 cut(s) | 1210 |
| BstUI | CGCG | 1 cut(s) | 911 |
| BstV1I | GCAGC | 8 cut(s) | 456, 832, 841, 850, 900, 1032, 1035, 1294 |
| BstV2I | GAAGAC | 2 cut(s) | 661, 851 |
| BstX2I | RGATCY | 2 cut(s) | 661, 1365 |
| BstYI | RGATCY | 2 cut(s) | 661, 1365 |
| BstZ17I | GTATAC | 1 cut(s) | 1201 |
| Bsu15I | ATCGAT | 1 cut(s) | 55 |
| BsuRI | GGCC | 1 cut(s) | 944 |
| BsuTUI | ATCGAT | 1 cut(s) | 55 |
| BtgZI | GCGATG | 1 cut(s) | 912 |
| BtrI | CACGTC | 1 cut(s) | 798 |
| BtsCI | GGATG | 3 cut(s) | 10, 211, 230 |
| BtsI | GCAGTG | 2 cut(s) | 604, 1215 |
| BtsIMutI | CAGTG | 2 cut(s) | 604, 1215 |
| Cac8I | GCNNGC | 3 cut(s) | 63, 293, 337 |
| CfoI | GCGC | 1 cut(s) | 913 |
| Cfr10I | RCCGGY | 1 cut(s) | 683 |
| Cfr13I | GGNCC | 1 cut(s) | 1053 |
| ClaI | ATCGAT | 1 cut(s) | 55 |
| CseI | GACGC | 1 cut(s) | 29 |
| Csp6I | GTAC | 3 cut(s) | 407, 505, 1037 |
| CspAI | ACCGGT | 1 cut(s) | 683 |
| CviAII | CATG | 7 cut(s) | 122, 143, 220, 517, 530, 1060, 1138 |
| CviQI | GTAC | 3 cut(s) | 407, 505, 1037 |
| DdeI | CTNAG | 2 cut(s) | 27, 269 |
| DpnI | GATC | 3 cut(s) | 663, 1142, 1367 |
| DpnII | GATC | 3 cut(s) | 661, 1140, 1365 |
| DraI | TTTAAA | 1 cut(s) | 454 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1328 |
| EaeI | YGGCCR | 1 cut(s) | 942 |
| Eam1104I | CTCTTC | 1 cut(s) | 298 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1328 |
| EarI | CTCTTC | 1 cut(s) | 298 |
| EciI | GGCGGA | 1 cut(s) | 223 |
| Eco130I | CCWWGG | 1 cut(s) | 618 |
| Eco24I | GRGCYC | 1 cut(s) | 1259 |
| Eco31I | GGTCTC | 1 cut(s) | 653 |
| Eco47I | GGWCC | 1 cut(s) | 1053 |
| EcoRII | CCWGG | 1 cut(s) | 557 |
| EcoT14I | CCWWGG | 1 cut(s) | 618 |
| EcoT22I | ATGCAT | 1 cut(s) | 225 |
| EcoT38I | GRGCYC | 1 cut(s) | 1259 |
| ErhI | CCWWGG | 1 cut(s) | 618 |
| FaeI | CATG | 7 cut(s) | 125, 146, 223, 520, 533, 1063, 1141 |
| FaqI | GGGAC | 2 cut(s) | 972, 1027 |
| FatI | CATG | 7 cut(s) | 121, 142, 219, 516, 529, 1059, 1137 |
| FblI | GTMKAC | 3 cut(s) | 147, 351, 1200 |
| Fnu4HI | GCNGC | 9 cut(s) | 333, 445, 821, 830, 839, 914, 1021, 1024, 1308 |
| FokI | GGATG | 3 cut(s) | 17, 217, 218 |
| FriOI | GRGCYC | 1 cut(s) | 1259 |
| Fsp4HI | GCNGC | 9 cut(s) | 333, 445, 821, 830, 839, 914, 1021, 1024, 1308 |
| FspBI | CTAG | 6 cut(s) | 336, 551, 894, 917, 932, 1320 |
| GlaI | GCGC | 1 cut(s) | 912 |
| GluI | GCNGC | 9 cut(s) | 333, 445, 821, 830, 839, 914, 1021, 1024, 1308 |
| GsaI | CCCAGC | 1 cut(s) | 141 |
| GsuI | CTGGAG | 2 cut(s) | 741, 1151 |
| HaeIII | GGCC | 1 cut(s) | 944 |
| HapII | CCGG | 5 cut(s) | 202, 280, 684, 753, 1253 |
| HgaI | GACGC | 1 cut(s) | 29 |
| HhaI | GCGC | 1 cut(s) | 913 |
| Hin1II | CATG | 7 cut(s) | 125, 146, 223, 520, 533, 1063, 1141 |
| Hin6I | GCGC | 1 cut(s) | 911 |
| HinP1I | GCGC | 1 cut(s) | 911 |
| HincII | GTYRAC | 3 cut(s) | 148, 277, 1228 |
| HindII | GTYRAC | 3 cut(s) | 148, 277, 1228 |
| HinfI | GANTC | 5 cut(s) | 70, 285, 316, 808, 960 |
| HpaII | CCGG | 5 cut(s) | 202, 280, 684, 753, 1253 |
| HphI | GGTGA | 3 cut(s) | 419, 698, 1257 |
| Hpy188I | TCNGA | 4 cut(s) | 30, 805, 1301, 1358 |
| Hpy188III | TCNNGA | 2 cut(s) | 383, 511 |
| HpyAV | CCTTC | 5 cut(s) | 514, 578, 719, 1044, 1379 |
| HpyCH4III | ACNGT | 6 cut(s) | 406, 421, 541, 890, 992, 1269 |
| HpyCH4IV | ACGT | 3 cut(s) | 354, 797, 904 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 58, 134, 731, 826, 829, 835, 838, 908, 1316 |
| HpyF3I | CTNAG | 2 cut(s) | 27, 269 |
| HpySE526I | ACGT | 3 cut(s) | 354, 797, 904 |
| Hsp92II | CATG | 7 cut(s) | 125, 146, 223, 520, 533, 1063, 1141 |
| HspAI | GCGC | 1 cut(s) | 911 |
| Kzo9I | GATC | 3 cut(s) | 661, 1140, 1365 |
| LmnI | GCTCC | 5 cut(s) | 614, 722, 826, 835, 1174 |
| Lsp1109I | GCAGC | 8 cut(s) | 456, 832, 841, 850, 900, 1032, 1035, 1294 |
| LweI | GCATC | 5 cut(s) | 61, 239, 255, 889, 1197 |
| MaeI | CTAG | 6 cut(s) | 336, 551, 894, 917, 932, 1320 |
| MaeII | ACGT | 3 cut(s) | 354, 797, 904 |
| MaeIII | GTNAC | 2 cut(s) | 400, 905 |
| MalI | GATC | 3 cut(s) | 663, 1142, 1367 |
| MboI | GATC | 3 cut(s) | 661, 1140, 1365 |
| MboII | GAAGA | 7 cut(s) | 203, 315, 407, 488, 536, 661, 856 |
| MfeI | CAATTG | 1 cut(s) | 606 |
| MflI | RGATCY | 2 cut(s) | 661, 1365 |
| MhlI | GDGCHC | 1 cut(s) | 1259 |
| MlyI | GAGTC | 4 cut(s) | 279, 310, 802, 954 |
| MmeI | TCCRAC | 3 cut(s) | 67, 1152, 1279 |
| MnlI | CCTC | 9 cut(s) | 162, 264, 330, 339, 694, 978, 1157, 1173, 1362 |
| Mph1103I | ATGCAT | 1 cut(s) | 225 |
| MseI | TTAA | 4 cut(s) | 438, 453, 462, 1385 |
| MslI | CAYNNNNRTG | 2 cut(s) | 753, 1094 |
| MspI | CCGG | 5 cut(s) | 202, 280, 684, 753, 1253 |
| MspR9I | CCNGG | 3 cut(s) | 203, 559, 1254 |
| MunI | CAATTG | 1 cut(s) | 606 |
| MvaI | CCWGG | 1 cut(s) | 559 |
| MvnI | CGCG | 1 cut(s) | 911 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 58, 134, 731, 826, 829, 835, 838, 908, 1316 |
| NciI | CCSGG | 2 cut(s) | 203, 1254 |
| NdeII | GATC | 3 cut(s) | 661, 1140, 1365 |
| NheI | GCTAGC | 1 cut(s) | 335 |
| NlaIII | CATG | 7 cut(s) | 125, 146, 223, 520, 533, 1063, 1141 |
| NlaIV | GGNNCC | 2 cut(s) | 616, 1367 |
| NmuCI | GTSAC | 1 cut(s) | 400 |
| NsiI | ATGCAT | 1 cut(s) | 225 |
| NspI | RCATGY | 2 cut(s) | 125, 146 |
| OliI | CACNNNNGTG | 1 cut(s) | 753 |
| PciI | ACATGT | 1 cut(s) | 121 |
| PfeI | GAWTC | 1 cut(s) | 70 |
| PflFI | GACNNNGTC | 1 cut(s) | 152 |
| PinAI | ACCGGT | 1 cut(s) | 683 |
| PkrI | GCNGC | 9 cut(s) | 334, 446, 822, 831, 840, 915, 1022, 1025, 1309 |
| PleI | GAGTC | 4 cut(s) | 279, 310, 802, 954 |
| PpsI | GAGTC | 4 cut(s) | 279, 310, 802, 954 |
| Ppu21I | YACGTR | 1 cut(s) | 905 |
| PscI | ACATGT | 1 cut(s) | 121 |
| PshBI | ATTAAT | 1 cut(s) | 1385 |
| Psp6I | CCWGG | 1 cut(s) | 557 |
| PspFI | CCCAGC | 1 cut(s) | 137 |
| PspGI | CCWGG | 1 cut(s) | 557 |
| PspN4I | GGNNCC | 2 cut(s) | 616, 1367 |
| PspPI | GGNCC | 1 cut(s) | 1053 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 488, 520 |
| PsuI | RGATCY | 2 cut(s) | 661, 1365 |
| PsyI | GACNNNGTC | 1 cut(s) | 152 |
| RsaI | GTAC | 3 cut(s) | 408, 506, 1038 |
| RsaNI | GTAC | 3 cut(s) | 407, 505, 1037 |
| RseI | CAYNNNNRTG | 2 cut(s) | 753, 1094 |
| SalI | GTCGAC | 1 cut(s) | 146 |
| SaqAI | TTAA | 4 cut(s) | 438, 453, 462, 1385 |
| SatI | GCNGC | 9 cut(s) | 333, 445, 821, 830, 839, 914, 1021, 1024, 1308 |
| Sau3AI | GATC | 3 cut(s) | 661, 1140, 1365 |
| Sau96I | GGNCC | 1 cut(s) | 1053 |
| SchI | GAGTC | 4 cut(s) | 279, 310, 802, 954 |
| ScrFI | CCNGG | 3 cut(s) | 203, 559, 1254 |
| SduI | GDGCHC | 1 cut(s) | 1259 |
| SfaNI | GCATC | 5 cut(s) | 61, 239, 255, 889, 1197 |
| SfcI | CTRYAG | 1 cut(s) | 1210 |
| SinI | GGWCC | 1 cut(s) | 1053 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 753, 1094 |
| SpeI | ACTAGT | 1 cut(s) | 931 |
| SsiI | CCGC | 4 cut(s) | 234, 333, 1196, 1220 |
| SspMI | CTAG | 6 cut(s) | 336, 551, 894, 917, 932, 1320 |
| StyD4I | CCNGG | 3 cut(s) | 201, 557, 1252 |
| StyI | CCWWGG | 1 cut(s) | 618 |
| TaaI | ACNGT | 6 cut(s) | 406, 421, 541, 890, 992, 1269 |
| TaiI | ACGT | 3 cut(s) | 357, 800, 907 |
| TaqI | TCGA | 5 cut(s) | 55, 131, 147, 189, 1109 |
| TatI | WGTACW | 2 cut(s) | 504, 1036 |
| TauI | GCSGC | 1 cut(s) | 335 |
| TfiI | GAWTC | 1 cut(s) | 70 |
| Tru1I | TTAA | 4 cut(s) | 438, 453, 462, 1385 |
| Tru9I | TTAA | 4 cut(s) | 438, 453, 462, 1385 |
| TscAI | CASTG | 2 cut(s) | 604, 1222 |
| TseFI | GTSAC | 1 cut(s) | 400 |
| TseI | GCWGC | 8 cut(s) | 444, 820, 829, 838, 913, 1020, 1023, 1307 |
| Tsp45I | GTSAC | 1 cut(s) | 400 |
| TspDTI | ATGAA | 5 cut(s) | 533, 536, 693, 1044, 1071 |
| TspGWI | ACGGA | 1 cut(s) | 315 |
| TspRI | CASTG | 2 cut(s) | 604, 1222 |
| Tth111I | GACNNNGTC | 1 cut(s) | 152 |
| VpaK11BI | GGWCC | 1 cut(s) | 1053 |
| VspI | ATTAAT | 1 cut(s) | 1385 |
| XapI | RAATTY | 3 cut(s) | 464, 628, 978 |
| XceI | RCATGY | 2 cut(s) | 125, 146 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 244, 952, 978 |
| XmiI | GTMKAC | 3 cut(s) | 147, 351, 1200 |
| XspI | CTAG | 6 cut(s) | 336, 551, 894, 917, 932, 1320 |
| Zsp2I | ATGCAT | 1 cut(s) | 225 |